View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8521A_low_371 (Length: 204)
Name: NF8521A_low_371
Description: NF8521A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8521A_low_371 |
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Alignment Details
Target: chr2 (Bit Score: 167; Significance: 1e-89; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 14 - 180
Target Start/End: Complemental strand, 32959895 - 32959729
Alignment:
| Q |
14 |
gaaggagaaaaaatatgatagaaatgtacttacaatcttgcatgaaccaagttgaagaagaccatgtccagcttgaattacagctatggtctgctcatgg |
113 |
Q |
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| T |
32959895 |
gaaggagaaaaaatatgatagaaatgtacttacaatcttgcatgaaccaagttgaagaagaccatgtccagcttgaattacagctatggtctgctcatgg |
32959796 |
T |
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| Q |
114 |
aaacaaataaaatgagttgaaaaatcttaagaaatcaattaatccttgtgagaccaataataatagc |
180 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32959795 |
aaacaaataaaatgagttgaaaaatcttaagaaatcaattaatccttgtgagaccaataataatagc |
32959729 |
T |
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