View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8521A_low_76 (Length: 350)
Name: NF8521A_low_76
Description: NF8521A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8521A_low_76 |
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Alignment Details
Target: chr2 (Bit Score: 313; Significance: 1e-176; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 313; E-Value: 1e-176
Query Start/End: Original strand, 10 - 330
Target Start/End: Complemental strand, 21491786 - 21491466
Alignment:
| Q |
10 |
ccagagactaaaggggtaccaatggaggaagtggagagtatgcttgaaaagagatttgtgcagatcaagttttggaagaagagagattctccctctgaga |
109 |
Q |
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| T |
21491786 |
ccagagactaaaggggtaccaatggaggaagtggagagtatgcttgaaaagagatttgtgcagatcaagttttggaagaagagagattctccctctgaga |
21491687 |
T |
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| Q |
110 |
agaaataattggtcagaagaaaataaataattgagtctagttttatgtttagtttcatagctttaattaattggtaatgtgtctcataaactatgttaat |
209 |
Q |
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| T |
21491686 |
agaaataattggtcagaagaaaataaataattgagtctagttttatatttagtttcatagctttaattaattggtaatgtgtctcataaactatgttaat |
21491587 |
T |
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| Q |
210 |
tttgcgtgtatgtttggattaacggtaagtttgtccgagttaccgtgtcactgtgatttggtcaaatttgttgtcattctaaatatgcaagacaatggtt |
309 |
Q |
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| T |
21491586 |
tttgcatgtatgtttggattaacggtaagtttgtccgagttaccgtgtcactgtgatttggtcaaatttgttgtcattctaaatatgcaagacaatggtt |
21491487 |
T |
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| Q |
310 |
ttcttttgagctatgaattat |
330 |
Q |
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||||||||||||||||||||| |
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| T |
21491486 |
ttcttttgagctatgaattat |
21491466 |
T |
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