View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8521_high_12 (Length: 349)

Name: NF8521_high_12
Description: NF8521
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8521_high_12
NF8521_high_12
[»] chr7 (20 HSPs)
chr7 (1-244)||(4653576-4653819)
chr7 (1-238)||(4630983-4631220)
chr7 (1-238)||(4845814-4846054)
chr7 (1-238)||(4663047-4663284)
chr7 (1-244)||(4863978-4864221)
chr7 (34-244)||(4696986-4697196)
chr7 (1-238)||(4711874-4712114)
chr7 (1-238)||(4783637-4783874)
chr7 (1-238)||(4816066-4816303)
chr7 (73-244)||(4672831-4673002)
chr7 (1-244)||(4666994-4667240)
chr7 (1-218)||(4636913-4637130)
chr7 (86-238)||(4643848-4644000)
chr7 (264-332)||(4637767-4637835)
chr7 (264-331)||(4654409-4654476)
chr7 (264-332)||(4711198-4711266)
chr7 (269-329)||(4782949-4783009)
chr7 (269-329)||(4815378-4815438)
chr7 (292-332)||(4845126-4845166)
chr7 (274-330)||(4696297-4696353)
[»] chr4 (1 HSPs)
chr4 (34-238)||(18925544-18925748)


Alignment Details
Target: chr7 (Bit Score: 228; Significance: 1e-126; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 4653576 - 4653819
Alignment:
Q  1 aaatgtaacctgaccatgtaagtaaatgttgagtcaacttcgaaattccaagttacattgtaatcctctgtgacattcattccataacttctcgcagtta 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4653576 aaatgtaacctgaccatataagtaaatgttgagtcaacttcgaaattccaagttacattgtaatcctctgtgacattcattccataacttctcgcagtta 4653675  T
Q  101 ggtatacagcttctggtgcaatgtaatttggaattgtattgtttttatagttgagatgatttacaaaatcacttgatacacttagtggatattgtttctc 200  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4653676 ggtatacagcttctggtgcgatgtaatttggaattgtattgtttttatagttgagatgatttacaaaatcacttgatacacttagtggatattgtttctc 4653775  T
Q  201 taagtaacgaggaaaatcgctatcccaattacgaaacaaaccag 244  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||    
T  4653776 taagtaacgaggataatcgttatcccaattacgaaacaaaccag 4653819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 4630983 - 4631220
Alignment:
Q  1 aaatgtaacctgaccatgtaagtaaatgttgagtcaacttcgaaattccaagttacattgtaatcctctgtgacattcattccataacttctcgcagtta 100  Q
    |||||||| || ||||| |||||||| |  || |||||||| ||||||||||||||||||||||||| |||  ||| |||||||||||||||||||||||    
T  4630983 aaatgtaatcttaccatataagtaaaagaagaatcaacttcaaaattccaagttacattgtaatcctttgttgcatccattccataacttctcgcagtta 4631082  T
Q  101 ggtatacagcttctggtgcaatgtaatttggaattgtattgtttttatagttgagatgatttacaaaatcacttgatacacttagtggatattgtttctc 200  Q
     ||| ||||||||||||||| ||||||||| ||| |||||||||  |||||| ||||||| | |||||| |||||||||||| |||||||||| ||||||    
T  4631083 agtaaacagcttctggtgcagtgtaatttgaaatggtattgtttaaatagtttagatgatgtccaaaataacttgatacactaagtggatattctttctc 4631182  T
Q  201 taagtaacgaggaaaatcgctatcccaattacgaaaca 238  Q
     |||||||||||||||||  | |||||||| |||||||    
T  4631183 caagtaacgaggaaaatcattgtcccaattgcgaaaca 4631220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 4846054 - 4845814
Alignment:
Q  1 aaatgtaacctgaccatgtaagtaaatgttgagtcaacttcgaaattccaagttacattgtaatcctctgtgacattcattccataacttctcgcagtta 100  Q
    ||||||||||| ||||| ||||||||  | || |||||||||||||||||||||||||| ||||||||||| |||| | ||||||||||||| |||||||    
T  4846054 aaatgtaaccttaccatataagtaaaactagaatcaacttcgaaattccaagttacattataatcctctgtcacatactttccataacttcttgcagtta 4845955  T
Q  101 ggtatacagcttctggtgcaatgtaatttggaattgtattgtttttatagttgagatgat---ttacaaaatcacttgatacacttagtggatattgttt 197  Q
     ||||||||||||||||||| ||||||||||||| |||||||||  |||||| |||||||   || || ||  |||||||||||| |||||||||| |||    
T  4845954 agtatacagcttctggtgcagtgtaatttggaatagtattgtttaaatagtttagatgatcacttccataaaaacttgatacactaagtggatattcttt 4845855  T
Q  198 ctctaagtaacgaggaaaatcgctatcccaattacgaaaca 238  Q
    ||| |||||||||||||||||  | |||||||| |||||||    
T  4845854 ctccaagtaacgaggaaaatcattgtcccaattgcgaaaca 4845814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 4663047 - 4663284
Alignment:
Q  1 aaatgtaacctgaccatgtaagtaaatgttgagtcaacttcgaaattccaagttacattgtaatcctctgtgacattcattccataacttctcgcagtta 100  Q
    ||||||||||| |||||||| ||||| |  || ||||| || ||||||||||||||||| ||||||||||| |||| | |||||||| |||| |||||||    
T  4663047 aaatgtaaccttaccatgtatgtaaaagaagaatcaacctcaaaattccaagttacattataatcctctgtcacatactttccataatttcttgcagtta 4663146  T
Q  101 ggtatacagcttctggtgcaatgtaatttggaattgtattgtttttatagttgagatgatttacaaaatcacttgatacacttagtggatattgtttctc 200  Q
     |||||||| |||||||||| ||||||||||||| |||||||||  |||||| ||||||| | |||||||||||||||||||| ||||||||| | ||||    
T  4663147 agtatacagtttctggtgcagtgtaatttggaatggtattgtttaaatagtttagatgatctccaaaatcacttgatacactttgtggatattctatctc 4663246  T
Q  201 taagtaacgaggaaaatcgctatcccaattacgaaaca 238  Q
     |||||||||||| ||||  | ||||||| ||||||||    
T  4663247 caagtaacgaggagaatcattttcccaataacgaaaca 4663284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 4863978 - 4864221
Alignment:
Q  1 aaatgtaacctgaccatgtaagtaaatgttgagtcaacttcgaaattccaagttacattgtaatcctctgtgacattcattccataacttctcgcagtta 100  Q
    ||||||||||| ||||| ||||||||  | || |||||||| |||||||||||||||||||| ||||||||| ||| |  ||| |||||||| |||||||    
T  4863978 aaatgtaaccttaccatataagtaaaattagaatcaacttcaaaattccaagttacattgtactcctctgtggcatactgtccgtaacttcttgcagtta 4864077  T
Q  101 ggtatacagcttctggtgcaatgtaatttggaattgtattgtttttatagttgagatgatttacaaaatcacttgatacacttagtggatattgtttctc 200  Q
     ||| ||| ||||||||||| |||||||| |||| || ||||||| |||||| ||||||| |  ||||||||||||||  ||| ||||||||||||||||    
T  4864078 agtacacaacttctggtgcagtgtaattttgaatggtgttgttttcatagttaagatgatgtttaaaatcacttgatatgctttgtggatattgtttctc 4864177  T
Q  201 taagtaacgaggaaaatcgctatcccaattacgaaacaaaccag 244  Q
     |||||||||||||||||  | |||||||||||||||| |||||    
T  4864178 caagtaacgaggaaaatcattgtcccaattacgaaacataccag 4864221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 34 - 244
Target Start/End: Complemental strand, 4697196 - 4696986
Alignment:
Q  34 tcaacttcgaaattccaagttacattgtaatcctctgtgacattcattccataacttctcgcagttaggtatacagcttctggtgcaatgtaatttggaa 133  Q
    ||||||||||||||||||||||||||| ||||||||||  ||| || ||||  |||||| ||||||| ||| ||||||||||||||| |||||||| |||    
T  4697196 tcaacttcgaaattccaagttacattgaaatcctctgtctcatccaatccacgacttcttgcagttaagtacacagcttctggtgcagtgtaattttgaa 4697097  T
Q  134 ttgtattgtttttatagttgagatgatttacaaaatcacttgatacacttagtggatattgtttctctaagtaacgaggaaaatcgctatcccaattacg 233  Q
    | || ||||||| |||||| ||||||| |  ||||||||||||||  ||| |||||||||||||||| |||||||||||||||||  | ||||| |||||    
T  4697096 tggtgttgttttcatagttaagatgatgtttaaaatcacttgatatgctttgtggatattgtttctccaagtaacgaggaaaatcattgtcccagttacg 4696997  T
Q  234 aaacaaaccag 244  Q
    ||||| |||||    
T  4696996 aaacataccag 4696986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 4712114 - 4711874
Alignment:
Q  1 aaatgtaacctgaccatgtaagtaaatgttgagtcaacttcgaaattccaagttacattgtaatcctctgtgacattcattccataacttctcgcagtta 100  Q
    ||||||||||| ||||| ||||||||  | || ||||||| |||||||||||||||||| ||||||||||| |||| ||||||||||||||| ||||| |    
T  4712114 aaatgtaaccttaccatataagtaaaactagaatcaactttgaaattccaagttacattataatcctctgtcacatccattccataacttcttgcagtaa 4712015  T
Q  101 ggtatacagcttctggtgcaatgtaatttggaattgtattgtttttatagttgagatgat---ttacaaaatcacttgatacacttagtggatattgttt 197  Q
     ||||||||||||||||||| ||||||| ||||| |||||||||  ||||||  ||||||   || || || || ||||||||||| ||||||||| |||    
T  4712014 agtatacagcttctggtgcagtgtaattgggaatggtattgtttaaatagtttggatgatcacttccataaacagttgatacactttgtggatattcttt 4711915  T
Q  198 ctctaagtaacgaggaaaatcgctatcccaattacgaaaca 238  Q
     || | |||| |||||||||| || ||||||||||||||||    
T  4711914 ttccaggtaaagaggaaaatcactgtcccaattacgaaaca 4711874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 4783874 - 4783637
Alignment:
Q  1 aaatgtaacctgaccatgtaagtaaatgttgagtcaacttcgaaattccaagttacattgtaatcctctgtgacattcattccataacttctcgcagtta 100  Q
    ||||||||||| ||||| |||||||| |  || |||||||| || ||||||||||||||||||||||||||  ||| ||||||||||||||| |||||||    
T  4783874 aaatgtaaccttaccatataagtaaaagcagaatcaacttcaaagttccaagttacattgtaatcctctgtctcatacattccataacttcttgcagtta 4783775  T
Q  101 ggtatacagcttctggtgcaatgtaatttggaattgtattgtttttatagttgagatgatttacaaaatcacttgatacacttagtggatattgtttctc 200  Q
     ||| ||| |||||||||||||||||||||||||   ||||||||||||  | || | || |  ||| ||||||||||||||   ||| || | ||||||    
T  4783774 agtaaacaccttctggtgcaatgtaatttggaatgacattgtttttatatgttaggttatgtgtaaagtcacttgatacactagatgggtactctttctc 4783675  T
Q  201 taagtaacgaggaaaatcgctatcccaattacgaaaca 238  Q
     |||||||||||| ||||  | ||||||||||||||||    
T  4783674 caagtaacgaggagaatcattgtcccaattacgaaaca 4783637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 4816303 - 4816066
Alignment:
Q  1 aaatgtaacctgaccatgtaagtaaatgttgagtcaacttcgaaattccaagttacattgtaatcctctgtgacattcattccataacttctcgcagtta 100  Q
    ||||||||||| ||||| |||||||| |  || |||||||| || ||||||||||||||||||||||||||  ||| ||||||||||||||| |||||||    
T  4816303 aaatgtaaccttaccatataagtaaaagcagaatcaacttcaaagttccaagttacattgtaatcctctgtctcatacattccataacttcttgcagtta 4816204  T
Q  101 ggtatacagcttctggtgcaatgtaatttggaattgtattgtttttatagttgagatgatttacaaaatcacttgatacacttagtggatattgtttctc 200  Q
     ||| ||| |||||||||||||||||||||||||   ||||||||||||  | || | || |  ||| ||||||||||||||   ||| || | ||||||    
T  4816203 agtaaacaccttctggtgcaatgtaatttggaatgacattgtttttatatgttaggttatgtgtaaagtcacttgatacactagatgggtactctttctc 4816104  T
Q  201 taagtaacgaggaaaatcgctatcccaattacgaaaca 238  Q
     |||||||||||| ||||  | ||||||||||||||||    
T  4816103 caagtaacgaggagaatcattgtcccaattacgaaaca 4816066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 73 - 244
Target Start/End: Original strand, 4672831 - 4673002
Alignment:
Q  73 acattcattccataacttctcgcagttaggtatacagcttctggtgcaatgtaatttggaattgtattgtttttatagttgagatgatttacaaaatcac 172  Q
    ||||| |||||||||||||| ||||||| ||| ||||||||||||||| ||||||||||||| |||||||||  | ||||||||||||  | | | ||||    
T  4672831 acatttattccataacttcttgcagttacgtaaacagcttctggtgcagtgtaatttggaatggtattgtttaaaaagttgagatgatgcatatactcac 4672930  T
Q  173 ttgatacacttagtggatattgtttctctaagtaacgaggaaaatcgctatcccaattacgaaacaaaccag 244  Q
    |||||||||| ||||||||||||||||| ||||||| | |||||||  | |||||||||||||||| |||||    
T  4672931 ttgatacactaagtggatattgtttctccaagtaaccatgaaaatcattgtcccaattacgaaacataccag 4673002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 4666994 - 4667240
Alignment:
Q  1 aaatgtaacctgaccatgtaagtaaatgttgagtcaacttcgaaattccaagttacattgtaatcctctgtgacattcattccataacttctcgcagtta 100  Q
    ||||| ||||| ||||| ||||||||  | || |||||||  |||||||| || ||||| |||| |||| || ||| ||||||||||||||| |||||||    
T  4666994 aaatgcaaccttaccatataagtaaaaatagaatcaactttaaaattccatgtcacattataattctctttggcatccattccataacttcttgcagtta 4667093  T
Q  101 ggtatacagcttctggtgcaatgtaatttggaattgtattgtttttatagttgagatgat---ttacaaaatcacttgatacacttagtggatattgttt 197  Q
     ||| ||| ||||||||||| ||||||||||||| ||||| | |  ||||||  ||||||    | |||||| ||||||||  ||| |||||||||||||    
T  4667094 agtacacaacttctggtgcagtgtaatttggaatagtattttgtaaatagtttggatgatcaggtccaaaataacttgatatgctttgtggatattgttt 4667193  T
Q  198 ctctaagtaacgaggaaaatcgctatcccaattacgaaacaaaccag 244  Q
    ||| |||||||||||||||||  | |||||||||||||||| |||||    
T  4667194 ctccaagtaacgaggaaaatcattgtcccaattacgaaacataccag 4667240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 4636913 - 4637130
Alignment:
Q  1 aaatgtaacctgaccatgtaagtaaatgttgagtcaacttcgaaattccaagttacattgtaatcctctgtgacattcattccataacttctcgcagtta 100  Q
    ||||||||||| ||||| |||||||| |  || |||||||| || |||||||||||||| ||||||| |||  ||| |||||| |||||||| |||||||    
T  4636913 aaatgtaaccttaccatataagtaaaagcagaatcaacttcaaagttccaagttacattataatcctttgtctcatacattccgtaacttcttgcagtta 4637012  T
Q  101 ggtatacagcttctggtgcaatgtaatttggaattgtattgtttttatagttgagatgatttacaaaatcacttgatacacttagtggatattgtttctc 200  Q
     ||| ||| |||||||||||||||||||||||||   ||||||||||||  | || | || |  ||| ||||||||||||||   ||| || | ||||||    
T  4637013 agtacacaacttctggtgcaatgtaatttggaatgacattgtttttatatgttaggttatgtgtaaagtcacttgatacactagatgggtactctttctc 4637112  T
Q  201 taagtaacgaggaaaatc 218  Q
     |||||| ||||||||||    
T  4637113 caagtaaagaggaaaatc 4637130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 86 - 238
Target Start/End: Original strand, 4643848 - 4644000
Alignment:
Q  86 aacttctcgcagttaggtatacagcttctggtgcaatgtaatttggaattgtattgtttttatagttgagatgatttacaaaatcacttgatacacttag 185  Q
    ||||||| |||||||  || ||||||||||||||| ||||||||||||| | ||| |||  |||||| ||||||| | || ||||| ||||||| |||||    
T  4643848 aacttcttgcagttaaataaacagcttctggtgcagtgtaatttggaatggcattttttaaatagtttagatgatgttcataatcatttgatacgcttag 4643947  T
Q  186 tggatattgtttctctaagtaacgaggaaaatcgctatcccaattacgaaaca 238  Q
     |||||||||||||| |||||||||||| ||||  | ||||||||||||||||    
T  4643948 cggatattgtttctccaagtaacgaggataatcattgtcccaattacgaaaca 4644000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 264 - 332
Target Start/End: Original strand, 4637767 - 4637835
Alignment:
Q  264 atctgaggcagtagtgtctgttagggagccacaattgatggctaaattgtaatcagggttgtatgagtt 332  Q
    |||| |||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  4637767 atctaaggcagtattgtcggttaaggagccacaattgatggctaaattgtaatcagggttgtatgagtt 4637835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 264 - 331
Target Start/End: Original strand, 4654409 - 4654476
Alignment:
Q  264 atctgaggcagtagtgtctgttagggagccacaattgatggctaaattgtaatcagggttgtatgagt 331  Q
    |||| ||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  4654409 atctaaggtagtagtgtctgttagggagccacaatcgatagctaaattgtaatcagggttgtatgagt 4654476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 264 - 332
Target Start/End: Complemental strand, 4711266 - 4711198
Alignment:
Q  264 atctgaggcagtagtgtctgttagggagccacaattgatggctaaattgtaatcagggttgtatgagtt 332  Q
    |||| |||||||||||| ||||  | |||||||||||||||||||||||||||||||||||||||||||    
T  4711266 atctaaggcagtagtgtttgttgagaagccacaattgatggctaaattgtaatcagggttgtatgagtt 4711198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 269 - 329
Target Start/End: Complemental strand, 4783009 - 4782949
Alignment:
Q  269 aggcagtagtgtctgttagggagccacaattgatggctaaattgtaatcagggttgtatga 329  Q
    |||||||||||| ||||  |||||||||| ||||||||||| |||||||||||||||||||    
T  4783009 aggcagtagtgtttgttgaggagccacaactgatggctaaactgtaatcagggttgtatga 4782949  T

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Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 269 - 329
Target Start/End: Complemental strand, 4815438 - 4815378
Alignment:
Q  269 aggcagtagtgtctgttagggagccacaattgatggctaaattgtaatcagggttgtatga 329  Q
    |||||||||||| ||||  |||||||||| ||||||||||| |||||||||||||||||||    
T  4815438 aggcagtagtgtttgttgaggagccacaactgatggctaaactgtaatcagggttgtatga 4815378  T

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Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 292 - 332
Target Start/End: Complemental strand, 4845166 - 4845126
Alignment:
Q  292 ccacaattgatggctaaattgtaatcagggttgtatgagtt 332  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  4845166 ccacaattgatggctaaattgtaatcagggttgtatgagtt 4845126  T

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Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 274 - 330
Target Start/End: Complemental strand, 4696353 - 4696297
Alignment:
Q  274 gtagtgtctgttagggagccacaattgatggctaaattgtaatcagggttgtatgag 330  Q
    |||||||||| |  ||||||||||||||||||||||||||||  ||||| |||||||    
T  4696353 gtagtgtctgatgaggagccacaattgatggctaaattgtaaatagggtcgtatgag 4696297  T

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Target: chr4 (Bit Score: 113; Significance: 4e-57; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 34 - 238
Target Start/End: Complemental strand, 18925748 - 18925544
Alignment:
Q  34 tcaacttcgaaattccaagttacattgtaatcctctgtgacattcattccataacttctcgcagttaggtatacagcttctggtgcaatgtaatttggaa 133  Q
    |||||||| ||||||||||||||||| ||||||| |||  ||| ||||||||||||||| ||||||| ||||||| ||||||||||  |||| |||||||    
T  18925748 tcaacttcaaaattccaagttacattataatcctttgtcgcatccattccataacttcttgcagttaagtatacaacttctggtgccgtgtagtttggaa 18925649  T
Q  134 ttgtattgtttttatagttgagatgatttacaaaatcacttgatacacttagtggatattgtttctctaagtaacgaggaaaatcgctatcccaattacg 233  Q
    | ||||||||| |||||||||||| || |  ||||||| |||||||||||||||||||||||||||| |||||||||||||||||| | ||||||| |||    
T  18925648 tggtattgtttatatagttgagattatgtgtaaaatcatttgatacacttagtggatattgtttctccaagtaacgaggaaaatcgttgtcccaataacg 18925549  T
Q  234 aaaca 238  Q
    |||||    
T  18925548 aaaca 18925544  T

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