View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8521_high_17 (Length: 317)
Name: NF8521_high_17
Description: NF8521
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8521_high_17 |
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Alignment Details
Target: chr5 (Bit Score: 268; Significance: 1e-149; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 11 - 282
Target Start/End: Original strand, 2587698 - 2587969
Alignment:
| Q |
11 |
aacctgtgtaatcaaccaattaaattaaatttacaggtcatatataaggcattaactataatacacgttatgacaacaacattaatgaaattattccttc |
110 |
Q |
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| T |
2587698 |
aacctgtgtaatcaaccaattaaattaaatttacaggtcatatataaggcattaactataatacacgttatgacaacaacattaatgaaattattccttc |
2587797 |
T |
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| Q |
111 |
ttaattaaatgaagacaacaatcaagtcaaaataattagtagtttgagcttgcttaaatcataatacaacgaactgatttttccgtccttctcacactgt |
210 |
Q |
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| T |
2587798 |
ttaattaaatgaagacaacaatcaagtcaaaataattagtagtttgagcttgcttaaatcataatacaacgaactgatttttccgtccttctcacactgt |
2587897 |
T |
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| Q |
211 |
cactcatattatgttttagaggattctactcgaagttattataaaataaagatttaattaaaatgttatatc |
282 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
2587898 |
cactcatattatgttttagaggattctactcgaagttattataaaataaaaatttaattaaaatgttatatc |
2587969 |
T |
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