View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8521_high_19 (Length: 293)
Name: NF8521_high_19
Description: NF8521
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8521_high_19 |
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Alignment Details
Target: chr4 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 2 - 277
Target Start/End: Original strand, 30093118 - 30093394
Alignment:
| Q |
2 |
tgccaaaaacataaaatcatattttctgaggacactannnnnnnggtgtaaatcgggtgtcctctgtgcgaacctgtaaaga--ctgatcctcaaaccaa |
99 |
Q |
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||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| |||||||||||||||| |
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| T |
30093118 |
tgccaaaaacataaaatcatattttctgaggacactacttttttggtgtaaatcgggtgtcctctgtgcgaacccgtaaagagactgatcctcaaaccaa |
30093217 |
T |
|
| Q |
100 |
atatgactttaatggctgaggataccactttgagaaagtgataacaactgttgtatattttttaggtataaacattgattgctaagtgacattaaaacca |
199 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30093218 |
atatgactttaatggctgaggataccactttgagaaagtgataacaactgttgtatattttttaggtataaacattgattgctaagtgacattaaaacca |
30093317 |
T |
|
| Q |
200 |
ctatataacattattattaatttttagaattctataatgattcctccccccattggagctctatgtggaattcctttc |
277 |
Q |
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|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30093318 |
ctatataacattattattaa-ttttagaattctataatgattcctccccccattggagctctatgtggaattcctttc |
30093394 |
T |
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