View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8521_low_45 (Length: 236)
Name: NF8521_low_45
Description: NF8521
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8521_low_45 |
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Alignment Details
Target: chr8 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 40360705 - 40360925
Alignment:
| Q |
1 |
accactttctcttctcttagatcaatgtctttgttaatgttaatcttctcctccttctcctccttctcctctgtagttttgcattcggagttttccatcg |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| ||||| |||||| |||||||||||||||||||||||||||| |
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| T |
40360705 |
accactttctcttctcttagatcaatgtctttgttaatgttcatcttctccttcttcttctcctcctcctccgtagttttgcattcggagttttccatcg |
40360804 |
T |
|
| Q |
101 |
gaacaactctagaaattttttctttggttgctagtggcaccgttggttcgtccttcgttgaaaccgaattcttacgaacttcggtttcattaatttcacg |
200 |
Q |
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|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40360805 |
gaacaactctagaaattttttctttggttgctagtggcaccgttggttcttccttcgttgaaaccgaattcttacgaacttcggtttcattaatttcacg |
40360904 |
T |
|
| Q |
201 |
aaaagaagtttgagaaataat |
221 |
Q |
| |
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||||||||||||||||||||| |
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| T |
40360905 |
aaaagaagtttgagaaataat |
40360925 |
T |
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