View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8521_low_52 (Length: 217)
Name: NF8521_low_52
Description: NF8521
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8521_low_52 |
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Alignment Details
Target: chr7 (Bit Score: 170; Significance: 2e-91; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 17 - 198
Target Start/End: Complemental strand, 28070114 - 28069933
Alignment:
| Q |
17 |
agatgagaatgaatgaatgtacgtacctggtaaccaaggagaaaaagaagggtcaaaataagaacaaacgttgatatccaatacaacacttccgccatca |
116 |
Q |
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| T |
28070114 |
agatgagaatgaatgaatgtacgtacctggtaaccaaggagaacaagaagggtcaaaataagaacaaacgttgatatccaatacaacacttccgccatca |
28070015 |
T |
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| Q |
117 |
cgtccactgctgctgcatgcgttcctccttccttctgtaacttccttcttttgtggaaactacctcgtttttgtgaggaaaa |
198 |
Q |
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| T |
28070014 |
cgtccactgctgctgcatgcgttcctccttccttctgtaacttccttcttttgtggaaaccacctcgtttttgtgagaaaaa |
28069933 |
T |
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