View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8522_low_19 (Length: 298)
Name: NF8522_low_19
Description: NF8522
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8522_low_19 |
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Alignment Details
Target: chr5 (Bit Score: 279; Significance: 1e-156; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 1 - 283
Target Start/End: Complemental strand, 15151400 - 15151118
Alignment:
| Q |
1 |
tagcctttataaatagatcaaaatcgatatatatcaagtattatttacatggaaatatgtgtaactatcactcatgttttacacaaaagtgcacaagaaa |
100 |
Q |
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| T |
15151400 |
tagcctttataaatagatcaaaatcgatatatatcaagtattatttacatggaaatatgtgtaactatcactcatgttttacacaaaagtgcacaagaaa |
15151301 |
T |
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| Q |
101 |
accattgtagttagggaagaaagatgtccgttttccatagtgtaaaggaagcactttatatgtgagtgatagaatgtctcaatctaatggataccccaca |
200 |
Q |
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| T |
15151300 |
accattgtagttagggaagaaagatctccgttttccatagtgtaaaggaagcactttatatgtgagtgatagaatgtctcaatctaatggataccccaca |
15151201 |
T |
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| Q |
201 |
tatctcagtcatgttgtcctcaaccacagcactagatgcctattccatctctctatcattgttggtccttttcagttccctgt |
283 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
15151200 |
tatctcagtcatgttgtcctcaaccacagcactagatgcctattccatctctctatcattgttggtccttttcagttccctgt |
15151118 |
T |
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