View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8522_low_5 (Length: 589)

Name: NF8522_low_5
Description: NF8522
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8522_low_5
NF8522_low_5
[»] chr3 (37 HSPs)
chr3 (19-206)||(6803323-6803509)
chr3 (328-526)||(9720954-9721154)
chr3 (113-330)||(24560246-24560463)
chr3 (128-332)||(41110317-41110521)
chr3 (130-282)||(220443-220595)
chr3 (115-330)||(25654969-25655185)
chr3 (126-289)||(21773824-21773987)
chr3 (167-330)||(36568902-36569064)
chr3 (167-326)||(16275707-16275866)
chr3 (113-289)||(30200127-30200306)
chr3 (140-332)||(18654596-18654788)
chr3 (133-288)||(52473964-52474119)
chr3 (123-243)||(43005824-43005944)
chr3 (115-231)||(46204917-46205033)
chr3 (128-289)||(37102188-37102349)
chr3 (120-307)||(46556179-46556367)
chr3 (169-294)||(9312505-9312630)
chr3 (114-331)||(41039947-41040164)
chr3 (135-282)||(37807131-37807278)
chr3 (135-276)||(27541983-27542124)
chr3 (120-268)||(2387820-2387968)
chr3 (328-383)||(6793273-6793328)
chr3 (223-325)||(28581189-28581291)
chr3 (367-437)||(7602980-7603055)
chr3 (168-239)||(52185100-52185171)
chr3 (130-236)||(14898022-14898128)
chr3 (116-216)||(10943726-10943826)
chr3 (168-280)||(40463919-40464031)
chr3 (253-331)||(24253891-24253969)
chr3 (113-216)||(28582621-28582724)
chr3 (256-331)||(28582681-28582756)
chr3 (253-328)||(34641159-34641234)
chr3 (212-273)||(10748345-10748406)
chr3 (188-277)||(55327474-55327563)
chr3 (187-243)||(13082947-13083003)
chr3 (135-219)||(34641043-34641127)
chr3 (135-219)||(40858616-40858700)
[»] chr4 (33 HSPs)
chr4 (113-307)||(31348342-31348536)
chr4 (125-330)||(54935109-54935315)
chr4 (125-328)||(45741931-45742134)
chr4 (113-326)||(27735774-27735987)
chr4 (125-330)||(54320475-54320680)
chr4 (113-289)||(46007738-46007916)
chr4 (87-243)||(45132586-45132736)
chr4 (128-328)||(49735468-49735668)
chr4 (129-242)||(1968445-1968558)
chr4 (140-332)||(5730826-5731018)
chr4 (136-320)||(35248738-35248922)
chr4 (113-331)||(36151605-36151821)
chr4 (189-289)||(24565385-24565485)
chr4 (135-265)||(26166988-26167118)
chr4 (167-299)||(2247832-2247963)
chr4 (154-268)||(16400870-16400984)
chr4 (129-282)||(17938153-17938307)
chr4 (176-289)||(34110897-34111009)
chr4 (110-219)||(37711169-37711278)
chr4 (167-328)||(41174428-41174589)
chr4 (125-282)||(47433755-47433912)
chr4 (104-277)||(6891379-6891553)
chr4 (113-219)||(56135778-56135884)
chr4 (187-291)||(29798387-29798492)
chr4 (231-328)||(6938394-6938491)
chr4 (255-331)||(37711294-37711370)
chr4 (130-233)||(44784038-44784141)
chr4 (169-215)||(54494723-54494769)
chr4 (169-230)||(2917061-2917122)
chr4 (130-215)||(28332850-28332935)
chr4 (255-287)||(23813142-23813174)
chr4 (135-219)||(34995102-34995186)
chr4 (135-219)||(43961461-43961545)
[»] chr5 (30 HSPs)
chr5 (113-332)||(13634740-13634959)
chr5 (110-331)||(7544162-7544383)
chr5 (125-282)||(4373612-4373769)
chr5 (169-328)||(8502835-8502994)
chr5 (113-328)||(16938508-16938723)
chr5 (113-283)||(28279521-28279692)
chr5 (165-330)||(37551488-37551651)
chr5 (165-330)||(37654318-37654481)
chr5 (167-330)||(37606977-37607140)
chr5 (167-330)||(37779186-37779349)
chr5 (120-276)||(9856916-9857072)
chr5 (115-326)||(26414924-26415136)
chr5 (167-286)||(20513487-20513610)
chr5 (169-282)||(36392196-36392309)
chr5 (113-289)||(2550391-2550567)
chr5 (104-320)||(36363051-36363268)
chr5 (212-328)||(14245088-14245204)
chr5 (167-325)||(9798615-9798773)
chr5 (167-289)||(17024263-17024385)
chr5 (168-285)||(16501833-16501950)
chr5 (167-243)||(10072732-10072808)
chr5 (181-277)||(20146917-20147013)
chr5 (226-326)||(1657955-1658055)
chr5 (167-333)||(10476111-10476277)
chr5 (113-219)||(40815326-40815431)
chr5 (200-289)||(22023483-22023574)
chr5 (255-320)||(10650435-10650502)
chr5 (135-231)||(11756928-11757024)
chr5 (128-243)||(14681513-14681627)
chr5 (240-330)||(14245202-14245292)
[»] chr7 (32 HSPs)
chr7 (111-330)||(41496955-41497174)
chr7 (113-288)||(33655148-33655323)
chr7 (168-289)||(34235046-34235167)
chr7 (113-289)||(1051539-1051713)
chr7 (113-331)||(13770945-13771161)
chr7 (167-330)||(40196530-40196693)
chr7 (174-320)||(4833539-4833685)
chr7 (167-289)||(24970204-24970326)
chr7 (191-328)||(18231693-18231830)
chr7 (125-328)||(47390896-47391100)
chr7 (87-294)||(34228352-34228560)
chr7 (113-296)||(25887221-25887405)
chr7 (125-325)||(43230277-43230476)
chr7 (167-268)||(22163170-22163270)
chr7 (167-268)||(22221878-22221978)
chr7 (192-328)||(30592253-30592389)
chr7 (76-218)||(39855975-39856117)
chr7 (187-284)||(10315736-10315833)
chr7 (174-282)||(32872827-32872935)
chr7 (135-237)||(41008233-41008334)
chr7 (168-243)||(13425205-13425280)
chr7 (126-282)||(42306376-42306528)
chr7 (120-281)||(17852907-17853067)
chr7 (128-239)||(37417722-37417833)
chr7 (129-219)||(26365813-26365903)
chr7 (135-243)||(40572319-40572427)
chr7 (168-219)||(18063670-18063721)
chr7 (223-268)||(31553242-31553287)
chr7 (174-243)||(42087085-42087154)
chr7 (187-240)||(47229920-47229973)
chr7 (253-330)||(48881556-48881633)
chr7 (256-328)||(39856037-39856109)
[»] chr6 (26 HSPs)
chr6 (113-325)||(9719034-9719245)
chr6 (125-328)||(30487306-30487508)
chr6 (129-328)||(33235996-33236194)
chr6 (110-296)||(9721170-9721355)
chr6 (175-281)||(4097559-4097665)
chr6 (178-289)||(1300714-1300825)
chr6 (136-289)||(21606883-21607036)
chr6 (113-289)||(31849139-31849315)
chr6 (113-331)||(1390348-1390566)
chr6 (130-283)||(2892649-2892801)
chr6 (188-295)||(10818320-10818427)
chr6 (168-282)||(1395720-1395834)
chr6 (113-282)||(19278080-19278252)
chr6 (167-325)||(5585304-5585463)
chr6 (167-331)||(34176418-34176581)
chr6 (168-324)||(10348804-10348958)
chr6 (167-243)||(25741490-25741566)
chr6 (199-282)||(2900025-2900108)
chr6 (120-327)||(16737997-16738204)
chr6 (113-219)||(12811090-12811195)
chr6 (113-330)||(14515502-14515717)
chr6 (167-243)||(13583802-13583878)
chr6 (224-294)||(9298625-9298696)
chr6 (212-289)||(33041590-33041667)
chr6 (124-197)||(6034203-6034276)
chr6 (173-328)||(665841-665996)
[»] scaffold0067 (2 HSPs)
scaffold0067 (104-289)||(39226-39415)
scaffold0067 (256-328)||(39362-39434)
[»] chr8 (33 HSPs)
chr8 (115-320)||(11575415-11575619)
chr8 (125-325)||(16652990-16653190)
chr8 (113-320)||(31543080-31543287)
chr8 (120-330)||(11785562-11785772)
chr8 (168-320)||(36308927-36309079)
chr8 (113-296)||(1281172-1281355)
chr8 (110-289)||(1026888-1027066)
chr8 (129-277)||(9718530-9718678)
chr8 (104-282)||(7979159-7979338)
chr8 (120-294)||(7502988-7503162)
chr8 (127-284)||(11033460-11033618)
chr8 (129-243)||(37032424-37032538)
chr8 (130-282)||(30664407-30664559)
chr8 (129-243)||(33922565-33922679)
chr8 (114-243)||(40990269-40990398)
chr8 (167-277)||(6315145-6315255)
chr8 (125-219)||(41103615-41103709)
chr8 (167-320)||(30479725-30479878)
chr8 (167-243)||(4247602-4247678)
chr8 (126-282)||(37923124-37923280)
chr8 (113-268)||(28083771-28083926)
chr8 (113-303)||(2248481-2248671)
chr8 (129-219)||(42650445-42650535)
chr8 (177-330)||(31738516-31738669)
chr8 (175-330)||(43732778-43732933)
chr8 (168-282)||(29358386-29358499)
chr8 (167-283)||(13405059-13405179)
chr8 (120-331)||(3726860-3727063)
chr8 (187-243)||(29691007-29691063)
chr8 (168-243)||(35694840-35694915)
chr8 (201-328)||(34634260-34634387)
chr8 (135-296)||(12022175-12022336)
chr8 (113-150)||(16653127-16653164)
[»] chr1 (26 HSPs)
chr1 (113-329)||(2858931-2859147)
chr1 (113-296)||(41498433-41498616)
chr1 (120-282)||(8529835-8529997)
chr1 (168-330)||(40094931-40095093)
chr1 (114-284)||(51597698-51597868)
chr1 (113-328)||(30010361-30010576)
chr1 (113-332)||(38509890-38510109)
chr1 (114-280)||(32951366-32951532)
chr1 (113-289)||(35349503-35349677)
chr1 (120-288)||(50744320-50744489)
chr1 (113-332)||(12234039-12234258)
chr1 (120-243)||(10391908-10392031)
chr1 (187-289)||(7444598-7444700)
chr1 (167-243)||(36285659-36285735)
chr1 (167-287)||(49946629-49946749)
chr1 (168-289)||(41676363-41676486)
chr1 (175-243)||(42230629-42230697)
chr1 (167-243)||(45585770-45585846)
chr1 (190-330)||(20576131-20576269)
chr1 (167-219)||(44211014-44211066)
chr1 (256-331)||(35349634-35349709)
chr1 (135-328)||(1085489-1085683)
chr1 (125-243)||(6563619-6563735)
chr1 (167-292)||(26940879-26941004)
chr1 (256-330)||(30010330-30010404)
chr1 (211-293)||(43552031-43552109)
[»] scaffold0171 (1 HSPs)
scaffold0171 (104-282)||(15969-16148)
[»] chr2 (37 HSPs)
chr2 (120-328)||(23748131-23748339)
chr2 (113-282)||(15224740-15224909)
chr2 (129-328)||(36347541-36347740)
chr2 (167-289)||(39732768-39732890)
chr2 (87-277)||(9426988-9427179)
chr2 (167-282)||(16565860-16565975)
chr2 (167-296)||(36566882-36567012)
chr2 (135-296)||(40022421-40022585)
chr2 (169-266)||(17379897-17379994)
chr2 (120-288)||(19566860-19567029)
chr2 (113-243)||(2241439-2241569)
chr2 (167-325)||(31795772-31795930)
chr2 (180-281)||(34209560-34209661)
chr2 (176-328)||(9631652-9631804)
chr2 (168-243)||(37739976-37740051)
chr2 (187-282)||(42316810-42316905)
chr2 (167-326)||(8426881-8427032)
chr2 (135-243)||(12541816-12541925)
chr2 (128-327)||(36046205-36046402)
chr2 (169-219)||(18811413-18811463)
chr2 (129-243)||(28262528-28262642)
chr2 (167-289)||(39821752-39821874)
chr2 (169-221)||(887001-887053)
chr2 (168-289)||(12751899-12752020)
chr2 (130-236)||(29525823-29525931)
chr2 (125-218)||(41841723-41841816)
chr2 (229-289)||(1583222-1583282)
chr2 (135-219)||(3094462-3094546)
chr2 (168-289)||(7681332-7681449)
chr2 (113-209)||(35736204-35736300)
chr2 (168-239)||(32503243-32503314)
chr2 (253-331)||(22356173-22356251)
chr2 (167-209)||(41778856-41778898)
chr2 (178-219)||(887210-887251)
chr2 (199-240)||(27926668-27926709)
chr2 (135-219)||(31061410-31061494)
chr2 (113-209)||(42296422-42296518)
[»] scaffold0262 (1 HSPs)
scaffold0262 (125-320)||(16304-16499)
[»] scaffold0294 (1 HSPs)
scaffold0294 (167-287)||(15346-15465)
[»] scaffold0026 (1 HSPs)
scaffold0026 (113-282)||(1201-1370)
[»] scaffold0096 (1 HSPs)
scaffold0096 (115-281)||(6615-6780)
[»] scaffold0341 (1 HSPs)
scaffold0341 (125-243)||(18812-18928)
[»] scaffold0007 (1 HSPs)
scaffold0007 (234-329)||(242366-242461)


Alignment Details
Target: chr3 (Bit Score: 112; Significance: 2e-56; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 19 - 206
Target Start/End: Complemental strand, 6803509 - 6803323
Alignment:
Q  19 atcaatcgcaatgaatggttgttttnnnnnnntggaatgtaaatatgccttgacaataaactttaagtgtgtgtttgaatcgaaaggtttagaaggg-aa 117  Q
    |||||||||| ||||||||||||||       ||||| ||||||||||||||||||||||||||||||||||||||| || ||| ||||||| |||| ||    
T  6803509 atcaatcgcactgaatggttgttttaaaaaaatggaa-gtaaatatgccttgacaataaactttaagtgtgtgtttggattgaa-ggtttaggaggggaa 6803412  T
Q  118 gagaggagagggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatat 206  Q
    |||||||||| |||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6803411 gagaggagagagtttaattttcttttttaaattacagactatgcaataagtttttataaaataaattatgtgtgattgaactattatat 6803323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 328 - 526
Target Start/End: Complemental strand, 9721154 - 9720954
Alignment:
Q  328 taaagtctttagctatgtttgatggtgcttggcaaagactattgtgaacgattctcactgttttctttccattcagaatactcatacttcattattgtac 427  Q
    ||||||||||||||||||||| | |||| | |||   |||| |||||||  |||||||| |||||||||| ||||||||||||  |||||||||||||||    
T  9721154 taaagtctttagctatgtttgttagtgcattgcagttactaatgtgaacagttctcactattttctttcctttcagaatactctaacttcattattgtac 9721055  T
Q  428 tct--attcttactattttgagtcacacaattaaaactttttcataaagtttgtgataatgttttgcctggaatgtaacattcaaacaacatagagtttt 525  Q
    |||  |||||||||||||||||||||  ||| | |||||||||||||||||| ||||||||||| ||||  ||||| | |||||||||||||||||||||    
T  9721054 tctctattcttactattttgagtcaccaaatgacaactttttcataaagtttatgataatgtttagcctaaaatgttatattcaaacaacatagagtttt 9720955  T
Q  526 g 526  Q
    |    
T  9720954 g 9720954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 113 - 330
Target Start/End: Original strand, 24560246 - 24560463
Alignment:
Q  113 gggaagagaggagagggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgt 212  Q
    |||||| |||| ||||||||  |||||||||||||||| || |||||| || | |||||| ||||||||||||  |||||||||| ||||||||||| ||    
T  24560246 gggaagggaggggagggtttgtttttcttttttaaattacggactatgtaacatgtttttctaaaataaattaaatgtgattgaagtattatatgatcgt 24560345  T
Q  213 ttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaatcctcccatccctttctctcataaatcctg 312  Q
    |||||||  |||||||||||||||||||||| ||| ||| | |||| ||||||||| |||||||||||||  ||||||||| || | ||| |||| |||     
T  24560346 ttatcatgttaatatgttaactttttaaaaaacatttcatagtgtcggtaatttaaaaatgaaaagtaaactctcccatccgttcccctcctaaaccctc 24560445  T
Q  313 catccaaatacaccctaa 330  Q
    |||||||| |||||||||    
T  24560446 catccaaacacaccctaa 24560463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 128 - 332
Target Start/End: Complemental strand, 41110521 - 41110317
Alignment:
Q  128 ggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaatat 227  Q
    |||||| ||||| |||||||||| || ||||   || | ||||||  ||||||||||| ||||||||||| |||||||||||||||||||||  ||||||    
T  41110521 ggtttacttttcgtttttaaattacggactagataacatgtttttcgaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatat 41110422  T
Q  228 gttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaatcctcccatccctttctctcataaatcctgcatccaaatacaccc 327  Q
    |||||||||||| |||  || ||| | |||||||||||||| ||||||||||||| | || | |||||| | ||| |||||||| |||||||| |||||     
T  41110421 gttaactttttataaaatatttcatagtgtccgtaatttaaaaatgaaaagtaaaccttctcctcccttcccctcctaaatcctccatccaaacacacca 41110322  T
Q  328 taaag 332  Q
    |||||    
T  41110321 taaag 41110317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 130 - 282
Target Start/End: Complemental strand, 220595 - 220443
Alignment:
Q  130 tttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaatatgt 229  Q
    |||| |||||||||||||||| || |||||| || | |||||| |||||||||| | || |||||||| | ||||| |||||||||| ||  ||||||||    
T  220595 tttacttttcttttttaaattacggactatgtaacatgtttttctaaaataaatcaagtatgattgaagtgttataagattgtttattatgttaatatgt 220496  T
Q  230 taactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaa 282  Q
    |||||||||||||| ||| ||| |||||||||||||||| |||||||| ||||    
T  220495 taactttttaaaaaacatttcataatgtccgtaatttaaaaatgaaaactaaa 220443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 115 - 330
Target Start/End: Complemental strand, 25655185 - 25654969
Alignment:
Q  115 gaagagaggagagggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactat--tatatgattgt 212  Q
    |||| |||| |||||||||| |||| |||||||||| || |||||  || | |||||| |||||||||||| ||||||||||| |||  ||||||||  |    
T  25655185 gaagggaggggagggtttaactttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattatatatgatcat 25655086  T
Q  213 ttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaatcctcccatccctttctctcataaatcctg 312  Q
    |||||||| ||||||||||||| || ||||| ||| ||  | ||| |||||| ||| ||||||||||||| |||||| |||||| | ||| ||||| ||     
T  25655085 ttatcatattaatatgttaactcttcaaaaaacatttcttagtgttcgtaatataaaaatgaaaagtaaaccctcccctcccttcccctcctaaat-ctc 25654987  T
Q  313 catccaaatacaccctaa 330  Q
    |||| |||||||||||||    
T  25654986 catctaaatacaccctaa 25654969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 126 - 289
Target Start/End: Original strand, 21773824 - 21773987
Alignment:
Q  126 agggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaat 225  Q
    ||||| || ||||||||| |||||| || |||||  || | |||||| |||||||||||| |||||||||||  ||||||||||||||||||||   |||    
T  21773824 agggtatacttttcttttctaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagaattatatgattgtttatcatgtaaat 21773923  T
Q  226 atgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaatcctccc 289  Q
    |||||||||||||||||| ||| ||  | ||| |||||||||| ||| ||||||||| ||||||    
T  21773924 atgttaactttttaaaaaacatttcctagtgttcgtaatttaaaaataaaaagtaaaccctccc 21773987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 167 - 330
Target Start/End: Complemental strand, 36569064 - 36568902
Alignment:
Q  167 gtttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaattt 266  Q
    |||||| |||||||||||| ||||||||||||||||||| |||||||||||||  ||||||||||||||||| |||| ||| ||| | ||| || |||||    
T  36569064 gtttttctaaaataaattaagtgtgattgaactattatacgattgtttatcatgttaatatgttaactttttgaaaaacatttcatagtgttcgaaattt 36568965  T
Q  267 aacaatgaaaagtaaatcctcccatccctttctctcataaatcctgcatccaaatacaccctaa 330  Q
    || |||||||| ||||  ||||| ||| || | ||| |||| ||| |||||||| |||||||||    
T  36568964 aaaaatgaaaa-taaactctcccctccattccactcctaaaccctccatccaaacacaccctaa 36568902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 167 - 326
Target Start/End: Complemental strand, 16275866 - 16275707
Alignment:
Q  167 gtttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaattt 266  Q
    |||||| |||||||||| | ||||||||||| ||||||||| |||||||||||  ||||| |||||||||||| ||| ||| ||| |||||||| |||||    
T  16275866 gtttttctaaaataaatcaagtgtgattgaagtattatatggttgtttatcatgttaataagttaactttttataaaacatttcataatgtccgaaattt 16275767  T
Q  267 aacaatgaaaagtaaatcctcccatccctttctctcataaatcctgcatccaaatacacc 326  Q
    || |||||| ||| ||  ||||| |||||||| || ||||| | | |||||||| |||||    
T  16275766 aaaaatgaatagtgaactctcccctccctttcccttataaaccatccatccaaacacacc 16275707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 113 - 289
Target Start/End: Complemental strand, 30200306 - 30200127
Alignment:
Q  113 gggaagagaggagagggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgat--- 209  Q
    |||||| ||||  |||||||| |||||||||||||||| || |||||  || | |||||| |||||||||| | |||||||| || || ||||||||       
T  30200306 gggaagggagggaagggtttacttttcttttttaaattacggactatataacatgtttttctaaaataaatcaagtgtgattaaagtactatatgatcgt 30200207  T
Q  210 tgtttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaatcctccc 289  Q
    ||||||| ||  |||||||| ||||||||||||| ||| ||| | |||||||||||||| |||||||| |||| ||||||    
T  30200206 tgtttattatgttaatatgtaaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaactaaaccctccc 30200127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 140 - 332
Target Start/End: Complemental strand, 18654788 - 18654596
Alignment:
Q  140 ttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaatatgttaacttttta 239  Q
    ||||||||||| || |||||  || | |||| | |||||||||||| |||| |||||| |||||||||||  ||||||||  ||||||||||||| || |    
T  18654788 ttttttaaattacggactatataacatgtttctctaaaataaattaagtgtaattgaagtattatatgatcatttatcatgttaatatgttaactcttca 18654689  T
Q  240 aaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaatcctcccatccctttctctcataaatcctgcatccaaatacaccctaaag 332  Q
    ||||  || | | |  ||||||||||||| |||||||  |||| ||||||||| ||||| ||| |||| ||| |||||||| |||||||||||    
T  18654688 aaaaatattttatagggtccgtaatttaaaaatgaaatctaaaccctcccatctctttccctcctaaaccctccatccaaacacaccctaaag 18654596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 133 - 288
Target Start/End: Original strand, 52473964 - 52474119
Alignment:
Q  133 aattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaatatgttaa 232  Q
    |||||||||||||||||| || | |||  || | ||| || ||||||||||||  |||||||||| |||||||||| ||||||||||| |||||||||||    
T  52473964 aattttcttttttaaattacggattatataacatgttattttaaaataaattacatgtgattgaagtattatatgactgtttatcatattaatatgttaa 52474063  T
Q  233 ctttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaatcctcc 288  Q
    ||||||| |||  || ||| |   |||||||||||| ||| ||||||||| |||||    
T  52474064 ctttttacaaaatatttcataggatccgtaatttaaaaataaaaagtaaaccctcc 52474119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 123 - 243
Target Start/End: Complemental strand, 43005944 - 43005824
Alignment:
Q  123 gagagggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgtttatcatact 222  Q
    |||||| ||||||||||||||||||||| | ||||||  || |  ||||| |||||||||||   | |||||||| |||||||||||  ||||||||| |    
T  43005944 gagaggatttaattttcttttttaaattccaaactatataacatatttttctaaaataaatttaatttgattgaagtattatatgatattttatcatatt 43005845  T
Q  223 aatatgttaactttttaaaaa 243  Q
    |||||||||||||||||||||    
T  43005844 aatatgttaactttttaaaaa 43005824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 115 - 231
Target Start/End: Original strand, 46204917 - 46205033
Alignment:
Q  115 gaagagaggagagggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgttt 214  Q
    ||||||| ||||| ||||| ||||||||||||||||  |||||||  || | |||||| |||||||||||| ||||||||||| |||||||||||  |||    
T  46204917 gaagagatgagagtgtttacttttcttttttaaattatgaactatataacatgtttttctaaaataaattaagtgtgattgaagtattatatgatcattt 46205016  T
Q  215 atcatactaatatgtta 231  Q
    | |||| ||||||||||    
T  46205017 aacatattaatatgtta 46205033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 128 - 289
Target Start/End: Complemental strand, 37102349 - 37102188
Alignment:
Q  128 ggtttaattttcttttttaaattgcgaactatgcaataagttttta-taaaataaattatgtgtgattgaactattatatgattgtttatcatactaata 226  Q
    |||||| || ||||||||||||| || |||||  || | ||||||  |||||||||| | ||||| ||||| ||||||||||| ||| || ||  |||||    
T  37102349 ggtttacttatcttttttaaattacggactatataacatgttttttctaaaataaatcaagtgtggttgaagtattatatgatcgtt-attatgttaata 37102251  T
Q  227 tgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaatcctccc 289  Q
    ||||||||||||||||| ||| ||| | |||||||||||||| |||||||| |||| ||||||    
T  37102250 tgttaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaactaaaccctccc 37102188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 120 - 307
Target Start/End: Original strand, 46556179 - 46556367
Alignment:
Q  120 gaggagagggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactat--tatatgattgtttatc 217  Q
    |||| ||| |||||||||||||||||||||| |  |||||  |||| ||||||  ||||||||||  ||||||||||| |||  |||||||  |||| ||    
T  46556179 gaggggagagtttaattttcttttttaaattacagactatataatatgtttttccaaaataaattgagtgtgattgaagtattatatatgaccgtttgtc 46556278  T
Q  218 atactaatatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaatcctcccatccctttctctcataaa 307  Q
    ||  |||||| |||||||||||||||  || ||| | ||||||||||| || ||||||||||||| |||||| ||| || ||||| ||||    
T  46556279 atgttaatatcttaactttttaaaaaatatgtcatagtgtccgtaattgaaaaatgaaaagtaaa-cctcccctccattcctctcctaaa 46556367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 169 - 294
Target Start/End: Complemental strand, 9312630 - 9312505
Alignment:
Q  169 ttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaatttaa 268  Q
    |||| |||||||||||| ||||||||  | |||||||||||||||||||||  |||||||||||||||||| |||  || ||| | |||| |||||||||    
T  9312630 ttttctaaaataaattaagtgtgatttgagtattatatgattgtttatcatgttaatatgttaactttttacaaaatatttcatagtgtctgtaatttaa 9312531  T
Q  269 caatgaaaagtaaatcctcccatccc 294  Q
     ||||||||  ||| |||||| ||||    
T  9312530 aaatgaaaatcaaaccctcccttccc 9312505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 114 - 331
Target Start/End: Complemental strand, 41040164 - 41039947
Alignment:
Q  114 ggaagagaggagagggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgtt 213  Q
    ||||| |||||||||||||| |||||  ||||||||| || | ||   || | | |||| ||||||||| || | ||||||||| |||||||||||||||    
T  41040164 ggaagggaggagagggtttacttttcgcttttaaattacggattagataacatgattttttaaaataaagtaagcgtgattgaagtattatatgattgtt 41040065  T
Q  214 tatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaatcctcccatccctttctctcataaatcctgc 313  Q
    ||||||  |||||||||||||||||| |||  || ||| | |||| ||||||||| | |||||| |||| ||| |  || ||| | ||| |||| | | |    
T  41040064 tatcatgttaatatgttaactttttataaaatatttcatagtgtctgtaatttaaaattgaaaattaaagcctacgctctcttcccctcctaaaccttcc 41039965  T
Q  314 atccaaatacaccctaaa 331  Q
    ||||||| ||||||||||    
T  41039964 atccaaacacaccctaaa 41039947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 135 - 282
Target Start/End: Original strand, 37807131 - 37807278
Alignment:
Q  135 ttttcttttttaaattgcgaactatgcaataagtttttataaaataaa-ttatgtgtgattgaactattatatgattgtttatcatactaatatgttaac 233  Q
    |||||||||||||| | ||||||||  || |  |||||| |||||||| ||| ||||||||||| ||||||||||| |||||||||  |||||| |||||    
T  37807131 ttttcttttttaaactacgaactatataacat-tttttaaaaaataaaattaagtgtgattgaagtattatatgatcgtttatcatgttaatatattaac 37807229  T
Q  234 tttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaa 282  Q
    |||||||||| ||| ||| | |||||  ||||||| || ||||||||||    
T  37807230 tttttaaaaaacatttcatagtgtccaaaatttaaaaacgaaaagtaaa 37807278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 135 - 276
Target Start/End: Complemental strand, 27542124 - 27541983
Alignment:
Q  135 ttttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaatatgttaact 234  Q
    ||||||||||||||||  |||||||  || |  ||||| ||||||||||||  |||||||||| ||||||||||| |||||||||  ||||||||||  |    
T  27542124 ttttcttttttaaattatgaactatataacatatttttctaaaataaattaactgtgattgaagtattatatgatcgtttatcatgttaatatgttagat 27542025  T
Q  235 ttttaaaaagcatctcacaatgtccgtaatttaacaatgaaa 276  Q
    |||||| ||| || ||| | ||||  |||||||| |||||||    
T  27542024 ttttaacaagtatttcatagtgtctctaatttaaaaatgaaa 27541983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 120 - 268
Target Start/End: Complemental strand, 2387968 - 2387820
Alignment:
Q  120 gaggagagggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgtttatcat 219  Q
    |||| ||||||||| ||||||||| |||||  ||  ||||  || | |||||| |||||||||||| |||||||| || ||||||||||| |||||||||    
T  2387968 gaggggagggtttacttttcttttctaaatcacggtctatataacatgtttttctaaaataaattaagtgtgattaaattattatatgatcgtttatcat 2387869  T
Q  220 actaatatgttaactttttaaaaagcatctcacaatgtccgtaatttaa 268  Q
      || ||| ||||||| ||||||| |||  || | ||||||||||||||    
T  2387868 gttattattttaacttattaaaaaacattccatagtgtccgtaatttaa 2387820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 328 - 383
Target Start/End: Complemental strand, 6793328 - 6793273
Alignment:
Q  328 taaagtctttagctatgtttgatggtgcttggcaaagactattgtgaacgattctc 383  Q
    ||||||||||| || |||||||| ||||||||||||||||||||||||||||||||    
T  6793328 taaagtctttaactgtgtttgatagtgcttggcaaagactattgtgaacgattctc 6793273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 223 - 325
Target Start/End: Complemental strand, 28581291 - 28581189
Alignment:
Q  223 aatatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaatcctcccatccctttctctcataaatcctgcatccaaata 322  Q
    |||||||||||||||||||||  || ||||||| || ||||||||| |||||||| |||| |||||| |||||| ||||  |||| ||| |||||||| |    
T  28581291 aatatgttaactttttaaaaaatatttcacaatatctgtaatttaaaaatgaaaactaaaccctcccctcccttcctcttctaaaccctccatccaaaca 28581192  T
Q  323 cac 325  Q
    |||    
T  28581191 cac 28581189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 367 - 437
Target Start/End: Original strand, 7602980 - 7603055
Alignment:
Q  367 tattgtgaacgattctcactgttttctttccattcaga-----atactcatacttcattattgtactctattctta 437  Q
    |||||||||||||||||||| |||| ||||| ||||||     |||||||| ||||||||||||||||||||||||    
T  7602980 tattgtgaacgattctcactattttgtttcctttcagaatactatactcatgcttcattattgtactctattctta 7603055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 168 - 239
Target Start/End: Original strand, 52185100 - 52185171
Alignment:
Q  168 tttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaatatgttaacttttta 239  Q
    ||||| ||||||||||||  | | |||||| |||||||||||||||||||||  ||||||||||||||||||    
T  52185100 tttttctaaaataaattaaatataattgaagtattatatgattgtttatcatgttaatatgttaacttttta 52185171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 130 - 236
Target Start/End: Original strand, 14898022 - 14898128
Alignment:
Q  130 tttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaatatgt 229  Q
    |||| |||||||||||||||| |  |||||   | | |||||| |||||||||||| ||||||||||| ||||||||||| ||||||| |  |||||| |    
T  14898022 tttacttttcttttttaaattacagactatatgacatgtttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcgtgttaatatat 14898121  T
Q  230 taacttt 236  Q
    |||||||    
T  14898122 taacttt 14898128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 116 - 216
Target Start/End: Complemental strand, 10943826 - 10943726
Alignment:
Q  116 aagagaggagagggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgttta 215  Q
    |||||||| ||||||| | ||||  |||||||||| ||||| |||||| | |||||| |||||||||||| ||||  ||||| |||||||| ||| ||||    
T  10943826 aagagaggggagggttcacttttaatttttaaattacgaacaatgcaaaatgtttttttaaaataaattaagtgtttttgaagtattatataattattta 10943727  T
Q  216 t 216  Q
    |    
T  10943726 t 10943726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 168 - 280
Target Start/End: Complemental strand, 40464031 - 40463919
Alignment:
Q  168 tttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaattta 267  Q
    ||||| |||||||||||| ||| ||||||| | |||||||||||||||||||  || | | ||||  ||||||||| ||  | | | |||||||||||||    
T  40464031 tttttctaaaataaattaagtgagattgaatttttatatgattgtttatcatgttattgttttaatattttaaaaaacaatttatagtgtccgtaattta 40463932  T
Q  268 acaatgaaaagta 280  Q
    | |||||||||||    
T  40463931 aaaatgaaaagta 40463919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 253 - 331
Target Start/End: Original strand, 24253891 - 24253969
Alignment:
Q  253 aatgtccgtaatttaacaatgaaaagtaaatcctcccatccctttctctcataaatcctgcatccaaatacaccctaaa 331  Q
    |||||||||||||||| || |||||||||||||| || |||||| | ||  |||| ||| |||||||| ||||||||||    
T  24253891 aatgtccgtaatttaaaaaagaaaagtaaatccttccctcccttccccttctaaaccctccatccaaacacaccctaaa 24253969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 113 - 216
Target Start/End: Complemental strand, 28582724 - 28582621
Alignment:
Q  113 gggaagagaggagagggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgt 212  Q
    |||||| |||| ||||||||| |||||||||||||||| || || ||  || | |||||| ||| |||||| | ||||| ||||| |||||||| || ||    
T  28582724 gggaagggaggggagggtttacttttcttttttaaattacggacgatataacatgtttttctaagataaatcaagtgtggttgaagtattatattatcgt 28582625  T
Q  213 ttat 216  Q
    ||||    
T  28582624 ttat 28582621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 256 - 331
Target Start/End: Original strand, 28582681 - 28582756
Alignment:
Q  256 gtccgtaatttaacaatgaaaagtaaatcctcccatccctttctctcataaatcctgcatccaaatacaccctaaa 331  Q
    ||||||||||||| || |||||||||| |||||| |||||| | ||| ||||||||   |||||| ||||||||||    
T  28582681 gtccgtaatttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaatcctcagtccaaacacaccctaaa 28582756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 253 - 328
Target Start/End: Original strand, 34641159 - 34641234
Alignment:
Q  253 aatgtccgtaatttaacaatgaaaagtaaatcctcccatccctttctctcataaatcctgcatccaaatacaccct 328  Q
    |||||||||||||||| || |||||||||  |||||| |||||| | ||| |||| ||| |||||||| |||||||    
T  34641159 aatgtccgtaatttaaaaaagaaaagtaagccctcccctcccttcccctcctaaaccctccatccaaacacaccct 34641234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 273
Target Start/End: Complemental strand, 10748406 - 10748345
Alignment:
Q  212 tttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatg 273  Q
    ||||||||  |||||||||||||||||||||| ||| | | |||| ||||||||||| ||||    
T  10748406 tttatcatgttaatatgttaactttttaaaaaacattttataatgcccgtaatttaaaaatg 10748345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 277
Target Start/End: Original strand, 55327474 - 55327563
Alignment:
Q  188 tgtgattgaactattatatgattgtttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaa 277  Q
    ||||||||||  |||||||| | |||||| ||  ||||| | |||||||||||||| ||| ||| ||||||||| |||||| || |||||    
T  55327474 tgtgattgaagcattatatgttcgtttattatgttaatacgctaactttttaaaaaacatttcataatgtccgtgatttaaaaacgaaaa 55327563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 187 - 243
Target Start/End: Complemental strand, 13083003 - 13082947
Alignment:
Q  187 gtgtgattgaactattatatgattgtttatcatactaatatgttaactttttaaaaa 243  Q
    |||| |||||| ||||||||||| |||||| ||  |||||||||||||||| |||||    
T  13083003 gtgtaattgaagtattatatgatcgtttattatgttaatatgttaacttttaaaaaa 13082947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 135 - 219
Target Start/End: Original strand, 34641043 - 34641127
Alignment:
Q  135 ttttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgtttatcat 219  Q
    |||| ||||||||||| ||||| ||| || | | |||| |||||||||||| ||||  ||||| |||||||||||  ||||||||    
T  34641043 ttttattttttaaattacgaacaatgtaaaaggattttttaaaataaattaagtgtttttgaagtattatatgatcatttatcat 34641127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 135 - 219
Target Start/End: Original strand, 40858616 - 40858700
Alignment:
Q  135 ttttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgtttatcat 219  Q
    |||| ||||||||||| ||||| ||| || | |||||| |||||||||||  ||||  ||||| |||||||||||  ||||||||    
T  40858616 ttttattttttaaattacgaacaatgtaaaatgtttttttaaaataaatttagtgtttttgaagtattatatgatcatttatcat 40858700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 95; Significance: 3e-46; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 113 - 307
Target Start/End: Complemental strand, 31348536 - 31348342
Alignment:
Q  113 gggaagagaggagagggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgt 212  Q
    |||||| |||| ||||||||| |||||||||||||||  || |||||  || | |||||| |||||||||||||||||||||||| ||||||||||||||    
T  31348536 gggaagggaggggagggtttacttttcttttttaaataacggactatataacatgtttttctaaaataaattatgtgtgattgaattattatatgattgt 31348437  T
Q  213 ttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaatcctcccatccctttctctcataaa 307  Q
    |||||||  |||||||||| ||||||||||| ||| ||| | |||||||||||||| ||||||||||||| ||| || |||||| | ||||||||    
T  31348436 ttatcatgttaatatgttagctttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaacccttccctcccttcccctcataaa 31348342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 125 - 330
Target Start/End: Original strand, 54935109 - 54935315
Alignment:
Q  125 gagggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactatt-atatgattgtttatcatacta 223  Q
    ||||||||| |||||||||||||||| ||||||||  || | |||||| |||||||||||| ||||||||||| |||| ||||||| |||||||||| ||    
T  54935109 gagggtttacttttcttttttaaattacgaactatataacatgtttttctaaaataaattaagtgtgattgaagtatttatatgatcgtttatcatatta 54935208  T
Q  224 atatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaatcctcccatccctttctctcataaatcctgcatccaaatac 323  Q
    ||||| |||||||||||||  ||| ||| | |||||||||||||| |||||||| |||| |||||| |||||| | ||| |||| ||| |||||||| ||    
T  54935209 atatgataactttttaaaatacatttcatagtgtccgtaatttaaaaatgaaaaataaaccctcccctcccttcccctcctaaaccctccatccaaacac 54935308  T
Q  324 accctaa 330  Q
    |||||||    
T  54935309 accctaa 54935315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 125 - 328
Target Start/End: Original strand, 45741931 - 45742134
Alignment:
Q  125 gagggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaa 224  Q
    |||| |||| |||| ||||||||||| || |||||  ||   |||||| ||||||||||||  |||||||||| ||||||||||| |||||||||  |||    
T  45741931 gaggatttacttttgttttttaaattacggactatataacttgtttttctaaaataaattaaatgtgattgaagtattatatgatcgtttatcatgttaa 45742030  T
Q  225 tatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaatcctcccatccctttctctcataaatcctgcatccaaataca 324  Q
    ||||||||||||||||||| ||| ||| | |||||||||||||| |||||||||||||  ||||| |||||||| | | |||| ||| |||||||| |||    
T  45742031 tatgttaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaactctcccctccctttcccgcctaaacccttcatccaaacaca 45742130  T
Q  325 ccct 328  Q
    ||||    
T  45742131 ccct 45742134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 113 - 326
Target Start/End: Original strand, 27735774 - 27735987
Alignment:
Q  113 gggaagagaggagagggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgt 212  Q
    |||||| || ||||||||||||||||| |||||||||| || |||||  || | |||||| |||||||||||| ||||||||||| |||||||||||  |    
T  27735774 gggaagggaagagagggtttaattttcatttttaaattacggactatataacatgtttttttaaaataaattaagtgtgattgaagtattatatgatcat 27735873  T
Q  213 ttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaatcctcccatccctttctctcataaatcctg 312  Q
    |||||||  ||||||| ||||| |||||||| ||| | | | |||||||||||||| |||||||| | || |||  | |||||| | ||| |||| |||     
T  27735874 ttatcatgttaatatgctaactctttaaaaaacattttatagtgtccgtaatttaaaaatgaaaaatgaaccctatcctcccttcccctcctaaaccctc 27735973  T
Q  313 catccaaatacacc 326  Q
    |||||||| |||||    
T  27735974 catccaaacacacc 27735987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 125 - 330
Target Start/End: Original strand, 54320475 - 54320680
Alignment:
Q  125 gagggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaa 224  Q
    |||||||| ||||||||||||||||| |  |||||  |  | |||||| |||||||||||| ||||||||| | |||||||||||||||||||||  |||    
T  54320475 gagggtttgattttcttttttaaattaccgactatatatcatgtttttctaaaataaattaagtgtgattggagtattatatgattgtttatcatgttaa 54320574  T
Q  225 tatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaatcctcccatccctttctctcataaatcctgcatccaaataca 324  Q
    |||| |||||||||||||| | | ||| | |||||||||||||| ||| ||||  ||| |||||| |||||| | ||| |||| |||  ||||||| |||    
T  54320575 tatgctaactttttaaaaaacgtttcatagtgtccgtaatttaaaaattaaaatcaaaccctcccctcccttcccctcctaaaccctcaatccaaacaca 54320674  T
Q  325 ccctaa 330  Q
    ||||||    
T  54320675 ccctaa 54320680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 113 - 289
Target Start/End: Complemental strand, 46007916 - 46007738
Alignment:
Q  113 gggaagagaggagagggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgt 212  Q
    |||||| |||| ||||||||| ||||||||||||||||||  |||||  ||   |||||| |||||||||||| ||| ||||||| |||||||||||  |    
T  46007916 gggaagggaggggagggtttacttttcttttttaaattgcagactatataacttgtttttgtaaaataaattaagtgagattgaagtattatatgatcat 46007817  T
Q  213 ttatcatactaatatgttaactttttaaaaag-catct-cacaatgtccgtaatttaacaatgaaaagtaaatcctccc 289  Q
    |||||||  ||||||||||||||||||||||  ||| | ||  ||||| ||||||||| ||||||||||||| ||||||    
T  46007816 ttatcatgttaatatgttaactttttaaaaaaacattttcattatgtcggtaatttaaaaatgaaaagtaaaccctccc 46007738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 87 - 243
Target Start/End: Complemental strand, 45132736 - 45132586
Alignment:
Q  87 gtgtgtttgaatcgaaaggtttagaagggaagagaggagagggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattat 186  Q
    |||||||||||| || || ||  || |||||||||||||| |||||| |||||||||||||||| || |||||  |||| ||      |||||||||||     
T  45132736 gtgtgtttgaattgagagtttaggaggggaagagaggagatggtttacttttcttttttaaattacggactatataatatgt------aaaataaattaa 45132643  T
Q  187 gtgtgattgaactattatatgattgtttatcatactaatatgttaactttttaaaaa 243  Q
    ||||||||||| ||||||||||| |||||||||  ||||||||||||||||||||||    
T  45132642 gtgtgattgaagtattatatgatcgtttatcattttaatatgttaactttttaaaaa 45132586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 128 - 328
Target Start/End: Complemental strand, 49735668 - 49735468
Alignment:
Q  128 ggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaatat 227  Q
    |||||| |||||||||||||| | || |||||  || | |||||| |||||||||| | ||||||| ||| |||||||| || |||||||||  |||||     
T  49735668 ggtttagttttcttttttaaactacggactatataacatgtttttctaaaataaatcaagtgtgatagaaatattatattatcgtttatcatgttaatag 49735569  T
Q  228 gttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaatcctcccatccctttctctcataaatcctgcatccaaatacaccc 327  Q
    |||||||||||||||  ||| |||   |||||||||||||| |||||||||| || |||||| |||||| | ||| |||| |||  ||||||| ||||||    
T  49735568 gttaactttttaaaagacatttcatgttgtccgtaatttaaaaatgaaaagtgaaccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 49735469  T
Q  328 t 328  Q
    |    
T  49735468 t 49735468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 129 - 242
Target Start/End: Complemental strand, 1968558 - 1968445
Alignment:
Q  129 gtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaatatg 228  Q
    ||||||||||| |||||||||| || |||||  |||| |||||| |||||||||| | ||||||||||| ||||||||||| |||||||||  |||||||    
T  1968558 gtttaattttcatttttaaattacggactatataatatgtttttctaaaataaatcaggtgtgattgaagtattatatgatcgtttatcatgttaatatg 1968459  T
Q  229 ttaactttttaaaa 242  Q
    ||||||||| ||||    
T  1968458 ttaacttttaaaaa 1968445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 140 - 332
Target Start/End: Complemental strand, 5731018 - 5730826
Alignment:
Q  140 ttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaatatgttaacttttta 239  Q
    ||||||||||| || |||||  || | |||| | |||||||||||| |||| |||||| |||||||||||  ||||||||  ||||||||||||| || |    
T  5731018 ttttttaaattacggactatataacatgtttctctaaaataaattaagtgtaattgaagtattatatgatcatttatcatgttaatatgttaactcttca 5730919  T
Q  240 aaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaatcctcccatccctttctctcataaatcctgcatccaaatacaccctaaag 332  Q
    ||||  || | | |  ||||||||||||| |||||||  |||| ||||||||| ||||| ||| |||| ||| |||||||| |||||||||||    
T  5730918 aaaaatattttatagggtccgtaatttaaaaatgaaatctaaaccctcccatctctttccctcctaaaccctccatccaaacacaccctaaag 5730826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 136 - 320
Target Start/End: Original strand, 35248738 - 35248922
Alignment:
Q  136 tttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaatatgttaactt 235  Q
    ||||||||||||||| || |||||  || | |||||| |||||||||||| ||||||||||| |||||||||||| ||||||||  ||||| ||||||||    
T  35248738 tttcttttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattatatgattatttatcatgttaatacgttaactt 35248837  T
Q  236 tttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaatcctcccatccctttctctcataaatcctgcatccaaa 320  Q
    || |||||  ||     | ||||| |||||||| | ||||||||||| |||||| |||||  ||||| |||| ||| ||||||||    
T  35248838 ttaaaaaaatattcttgagtgtccataatttaaaattgaaaagtaaaccctcccctccctacctctcctaaaccctccatccaaa 35248922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 113 - 331
Target Start/End: Original strand, 36151605 - 36151821
Alignment:
Q  113 gggaagagaggagagggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgt 212  Q
    ||||||||| |||||||||||  | | |||| |||||| |  |||||  || | |||||| |||||||||||| ||||||||||| ||||||||||| ||    
T  36151605 gggaagagatgagagggtttatgtatattttataaattacagactatataacatgtttttctaaaataaattaagtgtgattgaagtattatatgatcgt 36151704  T
Q  213 ttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaatcctcccatccctttctctcataaatcctg 312  Q
    |||||||  |||||||||||||||| ||||| ||| |   | ||| | |||||||| |||||||||||||| || || | || ||| ||| ||||||||     
T  36151705 ttatcatgttaatatgttaactttt-aaaaatcattttctagtgttcataatttaaaaatgaaaagtaaattctacctttcc-ttccctcctaaatcctc 36151802  T
Q  313 catccaaatacaccctaaa 331  Q
    |||| ||| ||||||||||    
T  36151803 catctaaacacaccctaaa 36151821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 189 - 289
Target Start/End: Complemental strand, 24565485 - 24565385
Alignment:
Q  189 gtgattgaactattatatgattgtttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaatcctcc 288  Q
    ||||||||| ||||||||| ||||||||||   ||||| |||||||||||||||||||| ||  ||| |||||||||||| ||||||||||||| |||||    
T  24565485 gtgattgaagtattatatgtttgtttatcacgttaataagttaactttttaaaaagcatttcgtaatatccgtaatttaaaaatgaaaagtaaaccctcc 24565386  T
Q  289 c 289  Q
    |    
T  24565385 c 24565385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 135 - 265
Target Start/End: Original strand, 26166988 - 26167118
Alignment:
Q  135 ttttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaatatgttaact 234  Q
    |||||||||||||||| |  |||||  || | |||| | |||||||||||| ||||||||||| ||||||||||| |||||||||  |||||||||||||    
T  26166988 ttttcttttttaaattacagactatataacatgtttctctaaaataaattaagtgtgattgaagtattatatgatcgtttatcatgttaatatgttaact 26167087  T
Q  235 ttttaaaaagcatctcacaatgtccgtaatt 265  Q
     || ||||| ||| ||| | |||||||||||    
T  26167088 cttaaaaaaacatttcaaagtgtccgtaatt 26167118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 167 - 299
Target Start/End: Complemental strand, 2247963 - 2247832
Alignment:
Q  167 gtttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaattt 266  Q
    |||||| ||||| |||| ||||||||||||| |||||||| ||||||||||||| ||||| |||||  |||||| || ||| | | ||||||||||||||    
T  2247963 gtttttctaaaaaaaat-atgtgtgattgaagtattatataattgtttatcatattaataagttaagattttaataaacattttataatgtccgtaattt 2247865  T
Q  267 aacaatgaaaagtaaatcctcccatccctttct 299  Q
    || |||||||| | || |||||| || ||||||    
T  2247864 aaaaatgaaaaatgaaccctcccttctctttct 2247832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 154 - 268
Target Start/End: Original strand, 16400870 - 16400984
Alignment:
Q  154 aactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaatatgttaactttttaaaaagcatctcaca 253  Q
    |||||| ||| | |||||| ||||||||||||  | |||||||| ||||||||||| |||||||||  ||||||||||||||||||||||  || ||| |    
T  16400870 aactatacaacatgtttttctaaaataaattaattatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttaaaaactatttcata 16400969  T
Q  254 atgtccgtaatttaa 268  Q
     ||||| ||||||||    
T  16400970 gtgtccctaatttaa 16400984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 129 - 282
Target Start/End: Complemental strand, 17938307 - 17938153
Alignment:
Q  129 gtttaattttcttttttaaattgcgaactatgcaata-agtttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaatat 227  Q
    ||||| |||||||||||||||| | ||||||  || | | ||||| | |||||||||| ||||||||||| ||||||||||| |||||||||  || |||    
T  17938307 gtttacttttcttttttaaattacaaactatataacatatttttttttaaataaattaagtgtgattgaagtattatatgatcgtttatcatgttattat 17938208  T
Q  228 gttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaa 282  Q
     |||| |||||||||| |||  || ||||||| |||||||| || ||||| ||||    
T  17938207 tttaaatttttaaaaaacattccataatgtccataatttaaaaacgaaaattaaa 17938153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 176 - 289
Target Start/End: Original strand, 34110897 - 34111009
Alignment:
Q  176 aaataaattatgtgtgattgaactattatatgattgtttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaa 275  Q
    ||||||| || ||||| || || ||||||||||| |||||||||  |||||||||||||||||||||| ||| ||||| | | |||||||||| ||| ||    
T  34110897 aaataaagtaagtgtgcttaaaatattatatgatcgtttatcatgttaatatgttaactttttaaaaaacatttcacagtat-cgtaatttaaaaataaa 34110995  T
Q  276 aagtaaatcctccc 289  Q
    ||||||| ||||||    
T  34110996 aagtaaaccctccc 34111009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 110 - 219
Target Start/End: Original strand, 37711169 - 37711278
Alignment:
Q  110 gaagggaagagaggagagggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgat 209  Q
    ||||||||| |||| ||||||||  |||||||||||||||| || |||||  || | |||| | |||||||||||| ||||||||||| |||||||||||    
T  37711169 gaagggaagggaggggagggtttgtttttcttttttaaattacggactatataacatgtttctctaaaataaattaagtgtgattgaagtattatatgat 37711268  T
Q  210 tgtttatcat 219  Q
      ||||||||    
T  37711269 catttatcat 37711278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 167 - 328
Target Start/End: Original strand, 41174428 - 41174589
Alignment:
Q  167 gtttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaattt 266  Q
    |||||| |||||||||| |  |||||||||  |||||||||||  ||||| ||  ||||||| |||||||||||||| ||| ||| | ||||| ||| ||    
T  41174428 gtttttctaaaataaatcaaatgtgattgatgtattatatgatcatttattatgttaatatgctaactttttaaaaaccatttcatagtgtccctaaatt 41174527  T
Q  267 aacaatgaaaagtaaatcctcccatccctttctctcataaatcctgcatccaaatacaccct 328  Q
    || |||||||| |||| | |||| |||||| | ||| |||| ||| |||||||| |||||||    
T  41174528 aaaaatgaaaactaaaccatcccctcccttcccctcctaaaccctccatccaaacacaccct 41174589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 125 - 282
Target Start/End: Complemental strand, 47433912 - 47433755
Alignment:
Q  125 gagggtttaattttcttttttaaattgcgaactatgcaataa---gtttttataaaataaattatgtgtgattgaactattatatgattgtttatcatac 221  Q
    ||||||||| |||||||||||||||| |  |||||  |||||   |||||| |||||||||||| ||||||||||| ||||||||||| |||||| ||      
T  47433912 gagggtttacttttcttttttaaattacagactat--aataacatgtttttttaaaataaattaagtgtgattgaagtattatatgatcgtttat-atgt 47433816  T
Q  222 taatatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaa 282  Q
    || ||| |||| |||||||||| |||  || ||||||| |||||||| || ||||| ||||    
T  47433815 tattattttaattttttaaaaaacattccataatgtccataatttaaaaacgaaaattaaa 47433755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 104 - 277
Target Start/End: Original strand, 6891379 - 6891553
Alignment:
Q  104 ggtttagaaggg-aagagaggagagggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactatt 202  Q
    |||||||||||| |||||||| ||  ||||| |||||||||||||| | | || |||  || | |||||| |||||||||||| ||||||||||| ||||    
T  6891379 ggtttagaaggggaagagaggggatagtttatttttcttttttaaaatacaaattatataacatgtttttctaaaataaattaagtgtgattgaagtatt 6891478  T
Q  203 atatgattgtttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaa 277  Q
    ||||||| |||||| ||  || ||| |||| ||||| |||| ||  ||| | ||||| |||||||| || |||||    
T  6891479 atatgatcgtttataatgttattattttaatttttttaaaaacaattcatagtgtccataatttaaaaacgaaaa 6891553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 113 - 219
Target Start/End: Original strand, 56135778 - 56135884
Alignment:
Q  113 gggaagagaggagagggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgt 212  Q
    |||||| |||| ||||||| | |||| ||||||||||| ||||| ||| || | |||||| |||||||||||| ||||  ||||| |||||||||||  |    
T  56135778 gggaagggaggggagggttcatttttattttttaaattacgaacaatgtaaaatgtttttttaaaataaattaagtgtttttgaagtattatatgatcat 56135877  T
Q  213 ttatcat 219  Q
    |||||||    
T  56135878 ttatcat 56135884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 187 - 291
Target Start/End: Original strand, 29798387 - 29798492
Alignment:
Q  187 gtgtgattgaactattatatgattgtttatcatact-aatatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaatcc 285  Q
    ||||||||||| ||||||||||| |||||| ||  | || ||||||| |||||||||| ||| ||| | |||||||||||||| |||||||| | || ||    
T  29798387 gtgtgattgaagtattatatgatcgtttattatgtttaacatgttaattttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaactgaaccc 29798486  T
Q  286 tcccat 291  Q
    ||||||    
T  29798487 tcccat 29798492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 231 - 328
Target Start/End: Original strand, 6938394 - 6938491
Alignment:
Q  231 aactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaatcctcccatccctttctctcataaatcctgcatccaaatacaccct 328  Q
    ||||||||||||| ||| | | ||| |||||||||||| |||||||||| || |||||| ||| || | |||||||| | | |||||||| |||||||    
T  6938394 aactttttaaaaaacattttataatatccgtaatttaaaaatgaaaagtgaaccctcccctccattcccctcataaaccttccatccaaacacaccct 6938491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 255 - 331
Target Start/End: Original strand, 37711294 - 37711370
Alignment:
Q  255 tgtccgtaatttaacaatgaaaagtaaatcctcccatccctttctctcataaatcctgcatccaaatacaccctaaa 331  Q
    |||||||||||||| |||||||  |||| |||||| |||||| | ||| |||| ||| |||||||| ||||||||||    
T  37711294 tgtccgtaatttaaaaatgaaatctaaaccctcccctcccttcccctcctaaaccctccatccaaacacaccctaaa 37711370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 130 - 233
Target Start/End: Original strand, 44784038 - 44784141
Alignment:
Q  130 tttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaatatgt 229  Q
    |||| |||||||||||||||| |  || ||  || | |||||| |||| ||||||| ||||||||||| ||||||||||| |||||| |   ||||||||    
T  44784038 tttacttttcttttttaaattacataccatataacaggtttttctaaagtaaattaagtgtgattgaagtattatatgatcgtttataaggttaatatgt 44784137  T
Q  230 taac 233  Q
    ||||    
T  44784138 taac 44784141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 54494723 - 54494769
Alignment:
Q  169 ttttataaaataaattatgtgtgattgaactattatatgattgttta 215  Q
    |||| |||||||| ||| ||||||||||| |||||||||||||||||    
T  54494723 ttttttaaaataagttaagtgtgattgaagtattatatgattgttta 54494769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 230
Target Start/End: Complemental strand, 2917122 - 2917061
Alignment:
Q  169 ttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaatatgtt 230  Q
    |||| |||||||||||   |||||||||| ||||||||||| |||||||||  |||||||||    
T  2917122 ttttctaaaataaatttattgtgattgaagtattatatgatcgtttatcatgttaatatgtt 2917061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 215
Target Start/End: Original strand, 28332850 - 28332935
Alignment:
Q  130 tttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgttta 215  Q
    |||| |||||||||||||||| |  |||||  || | |||||| |||| ||||||| || |||||||| ||||||||||| |||||    
T  28332850 tttacttttcttttttaaattacatactatataacaggtttttctaaagtaaattaagtatgattgaagtattatatgatcgttta 28332935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 255 - 287
Target Start/End: Complemental strand, 23813174 - 23813142
Alignment:
Q  255 tgtccgtaatttaacaatgaaaagtaaatcctc 287  Q
    ||||||||||||||||||||||||||| |||||    
T  23813174 tgtccgtaatttaacaatgaaaagtaagtcctc 23813142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 135 - 219
Target Start/End: Original strand, 34995102 - 34995186
Alignment:
Q  135 ttttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgtttatcat 219  Q
    |||| ||||||||||| ||||| |||  | | |||||| |||||||||||| ||||  ||||| ||||||| |||| ||||||||    
T  34995102 ttttattttttaaattacgaacaatgtgaaatgtttttctaaaataaattaagtgtttttgaagtattataagattatttatcat 34995186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 135 - 219
Target Start/End: Original strand, 43961461 - 43961545
Alignment:
Q  135 ttttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgtttatcat 219  Q
    |||| |||||||||||  |||| ||| || | |||||| |||||||||||| ||||  ||||| |||||||||||  ||||||||    
T  43961461 ttttattttttaaattatgaacaatgtaaaatgtttttttaaaataaattaagtgtttttgaagtattatatgatcatttatcat 43961545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 92; Significance: 2e-44; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 113 - 332
Target Start/End: Original strand, 13634740 - 13634959
Alignment:
Q  113 gggaagagaggagagggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgt 212  Q
    |||||| |||| ||||||||| |||||||||||||||  || |||||  || | |||||| |||||||||||||||||||||||| ||||||||||| ||    
T  13634740 gggaagggaggggagggtttacttttcttttttaaataacggactatataacatgtttttctaaaataaattatgtgtgattgaattattatatgatcgt 13634839  T
Q  213 ttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaatcctcccatccctttctctcataaatcctg 312  Q
    |||||||  |||||||||||||||||||||| ||| ||| | ||| |||||||||| ||||||||||||  |||||| |||||| | ||| |||| |||     
T  13634840 ttatcatgttaatatgttaactttttaaaaaacatttcatagtgttcgtaatttaaaaatgaaaagtaacccctcccctcccttcccctcctaaaccctc 13634939  T
Q  313 catccaaatacaccctaaag 332  Q
     ||||||| |||||| ||||    
T  13634940 aatccaaacacaccccaaag 13634959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 110 - 331
Target Start/End: Original strand, 7544162 - 7544383
Alignment:
Q  110 gaagggaagagaggagagggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgat 209  Q
    ||||||||| |||| ||||| | |||||||||||||||||| || |||||  || | |||||| |||||||||| | ||||||||||| |||||||||||    
T  7544162 gaagggaagggaggggagggctaaattttcttttttaaattacggactatataacatgtttttctaaaataaatcaagtgtgattgaagtattatatgat 7544261  T
Q  210 tgtttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaatcctcccatccctttctctcataaatc 309  Q
    ||||||| ||  ||||||| |||||||||||||| ||| ||| | |||||||||||||| ||||||||  ||| |||||| | |||| | ||| |||| |    
T  7544262 tgtttattatgttaatatgctaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaaccaaaccctccccttccttcccctcctaaacc 7544361  T
Q  310 ctgcatccaaatacaccctaaa 331  Q
    || |||||||| ||||| ||||    
T  7544362 ctccatccaaacacaccttaaa 7544383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 125 - 282
Target Start/End: Complemental strand, 4373769 - 4373612
Alignment:
Q  125 gagggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaa 224  Q
    |||| |||| |||||||||||||||| || |||||  || ||||||||  ||||||||||| ||||||||||| |||||||||||  ||||||||  |||    
T  4373769 gaggatttacttttcttttttaaattacggactatataacaagttttttaaaaataaattaagtgtgattgaaatattatatgatcatttatcatgttaa 4373670  T
Q  225 tatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaa 282  Q
    ||||||||||||| |||||  || ||||| |||||||||||||| ||| |||||||||    
T  4373669 tatgttaacttttaaaaaaatatttcacagtgtccgtaatttaaaaattaaaagtaaa 4373612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 169 - 328
Target Start/End: Complemental strand, 8502994 - 8502835
Alignment:
Q  169 ttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaatttaa 268  Q
    |||| |||||||||||| ||||||||||| |||||| | ||||| ||||||| |||| |||||||||||||||||  || ||| ||||||||||||||||    
T  8502994 ttttctaaaataaattaagtgtgattgaagtattatgtaattgtgtatcatattaatttgttaactttttaaaaaatatttcataatgtccgtaatttaa 8502895  T
Q  269 caatgaaaagtaaatcctcccatccctttctctcataaatcctgcatccaaatacaccct 328  Q
     |||||||||| || |||||||||| || |  ||||||| | | |||||||| |||||||    
T  8502894 aaatgaaaagtgaaccctcccatccattcccttcataaaccatccatccaaacacaccct 8502835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 113 - 328
Target Start/End: Original strand, 16938508 - 16938723
Alignment:
Q  113 gggaagagaggagagggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgt 212  Q
    |||||| |||| ||||||||  ||||||||||||| || || |||||  || | |||| | |||||||||||| ||||||||||| |||||||||||  |    
T  16938508 gggaagggaggggagggtttgtttttcttttttaagttacggactatataacatgtttctctaaaataaattaagtgtgattgaaatattatatgatcat 16938607  T
Q  213 ttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaatcctcccatccctttctctcataaatcctg 312  Q
    |||||||  ||| ||||||||| |||||||| ||| ||| | |||| ||||||||| |||||||  |||| |||||| ||| || ||||| |||| |||     
T  16938608 ttatcatgttaacatgttaactctttaaaaaacatttcatagtgtcagtaatttaaaaatgaaatctaaaccctcccctccattcctctcctaaaccctc 16938707  T
Q  313 catccaaatacaccct 328  Q
    |||||||| |||||||    
T  16938708 catccaaacacaccct 16938723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 113 - 283
Target Start/End: Complemental strand, 28279692 - 28279521
Alignment:
Q  113 gggaagagaggagagggtttaattttcttttttaaattgcgaactatgcaataagttttta-taaaataaattatgtgtgattgaactattatatgattg 211  Q
    |||||| |||||||||||||| ||||| ||||||||||  | | |||  || | ||||||  ||||||||| || ||||||||||| |||||||||||      
T  28279692 gggaagggaggagagggtttacttttcctttttaaattatggaatatataacatgttttttctaaaataaactaagtgtgattgaagtattatatgatca 28279593  T
Q  212 tttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaat 283  Q
    ||||||||  |||||||||||||||||||||| ||| ||| ||||||| |||||||| ||||||||||||||    
T  28279592 tttatcatgttaatatgttaactttttaaaaaacatttcataatgtccataatttaaaaatgaaaagtaaat 28279521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 165 - 330
Target Start/End: Original strand, 37551488 - 37551651
Alignment:
Q  165 aagtttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaat 264  Q
    ||||||||  ||||||||||||||||||||||| ||||||||||| |||||||||  |||||||||||||||||| ||| ||| |  || |||| ||| |    
T  37551488 aagttttttaaaaataaattatgtgtgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacattt--cagtgtctgtagt 37551585  T
Q  265 ttaacaatgaaaagtaaatcctcccatccctttctctcataaatcctgcatccaaatacaccctaa 330  Q
    |||| ||||||||||||| | |||  |||||||| ||| |||| ||| |||||||| |||||||||    
T  37551586 ttaaaaatgaaaagtaaaccatcctctccctttccctcgtaaaccctccatccaaacacaccctaa 37551651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 165 - 330
Target Start/End: Original strand, 37654318 - 37654481
Alignment:
Q  165 aagtttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaat 264  Q
    ||||||||  ||||||||||||||||||||||| ||||||||||| |||||||||  |||||||||||||||||| ||| ||| |  || |||| ||| |    
T  37654318 aagttttttaaaaataaattatgtgtgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacattt--cagtgtctgtagt 37654415  T
Q  265 ttaacaatgaaaagtaaatcctcccatccctttctctcataaatcctgcatccaaatacaccctaa 330  Q
    |||| ||||||||||||| | |||  |||||||| ||| |||| ||| |||||||| |||||||||    
T  37654416 ttaaaaatgaaaagtaaaccatcctctccctttccctcgtaaaccctccatccaaacacaccctaa 37654481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 167 - 330
Target Start/End: Original strand, 37606977 - 37607140
Alignment:
Q  167 gtttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaattt 266  Q
    |||||| ||||||||||||| |||||||||| ||||||||||| |||||||||  |||||||||||||||||| ||| ||| ||| | | || ||| |||    
T  37606977 gtttttttaaaataaattatatgtgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcatagtatctgtatttt 37607076  T
Q  267 aacaatgaaaagtaaatcctcccatccctttctctcataaatcctgcatccaaatacaccctaa 330  Q
    || ||||||||||||| | ||   |||||||| ||| |||| ||| |||||||| |||||||||    
T  37607077 aaaaatgaaaagtaaaccatcatctccctttccctcgtaaaccctccatccaaacacaccctaa 37607140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 167 - 330
Target Start/End: Original strand, 37779186 - 37779349
Alignment:
Q  167 gtttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaattt 266  Q
    |||||| ||||||||||||| |||||||||| ||||||||||| |||||||||  |||||||||||||||||| ||| ||| ||| | | || ||| |||    
T  37779186 gtttttttaaaataaattatatgtgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcatagtatctgtagttt 37779285  T
Q  267 aacaatgaaaagtaaatcctcccatccctttctctcataaatcctgcatccaaatacaccctaa 330  Q
    || ||||||||||||| | ||   |||||||| ||| |||| ||| |||||||| |||||||||    
T  37779286 aaaaatgaaaagtaaaccatcatctccctttccctcgtaaaccctccatccaaacacaccctaa 37779349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 120 - 276
Target Start/End: Original strand, 9856916 - 9857072
Alignment:
Q  120 gaggagagggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgtttatcat 219  Q
    |||| ||| ||||| ||||||||||||||||  | |||||  || | |||||| |||||||||| | ||||||||||| ||||||||||| |||||| ||    
T  9856916 gaggggagagtttagttttcttttttaaattaaggactatataacatgtttttctaaaataaatcaagtgtgattgaagtattatatgatcgtttattat 9857015  T
Q  220 actaatatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaa 276  Q
      |||||||||||||||||||||| ||| ||| | ||||||||| |||| |||||||    
T  9857016 gttaatatgttaactttttaaaaaacatttcatagtgtccgtaacttaaaaatgaaa 9857072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 115 - 326
Target Start/End: Original strand, 26414924 - 26415136
Alignment:
Q  115 gaagagaggagagggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgttt 214  Q
    |||| |||| ||||||||| ||||| |||||||||| || |||||   | | |||||| ||||||| |||| ||||||||||| ||||||||| | ||||    
T  26414924 gaagggaggggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattatatggtcgttt 26415023  T
Q  215 atcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaatcctcccatccctt-tctctcataaatcctgc 313  Q
    |||||  |||||||||||||||||| ||| ||| ||| | |||| |||| |||| |||||||||||||  ||||| ||| ||  | |||||||| ||| |    
T  26415024 atcatgttaatatgttaactttttataaaacatttcatagtgtctgtaacttaaaaatgaaaagtaaactctcccctcctttccccctcataaaccctcc 26415123  T
Q  314 atccaaatacacc 326  Q
    ||||||| |||||    
T  26415124 atccaaacacacc 26415136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 167 - 286
Target Start/End: Complemental strand, 20513610 - 20513487
Alignment:
Q  167 gtttttataaaataaattatgtgtgattgaactattatat----gattgtttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgta 262  Q
    ||||||||||||||||||| ||||||||||| ||||||||    ||| |||||||||  |||||||||||||||||||||| ||| ||| | |||| |||    
T  20513610 gtttttataaaataaattaagtgtgattgaagtattatatatatgatcgtttatcatgataatatgttaactttttaaaaaacatttcatagtgtctgta 20513511  T
Q  263 atttaacaatgaaaagtaaatcct 286  Q
     ||||| |||||||||||||||||    
T  20513510 gtttaaaaatgaaaagtaaatcct 20513487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 169 - 282
Target Start/End: Complemental strand, 36392309 - 36392196
Alignment:
Q  169 ttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaatttaa 268  Q
    |||| ||||||| |||| ||||||||||| ||||||||||| |||||||||  |||||||||||||||||| ||| ||| ||| | |||| |||||||||    
T  36392309 ttttctaaaatagattaagtgtgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcatagtgtctgtaatttaa 36392210  T
Q  269 caatgaaaagtaaa 282  Q
     |||||||||||||    
T  36392209 aaatgaaaagtaaa 36392196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 113 - 289
Target Start/End: Complemental strand, 2550567 - 2550391
Alignment:
Q  113 gggaagagaggagagggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgt 212  Q
    |||||| |||| ||||||||| |||||||||||||  | || |||||  || | |||||| || ||||||||| ||||||||||| ||||||||||||||    
T  2550567 gggaagggaggggagggtttacttttcttttttaagattcggactatataacatgtttttctataataaattacgtgtgattgaagtattatatgattgt 2550468  T
Q  213 ttatcatactaatatgttaact-ttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaatcctccc 289  Q
    |||||||  || ||| |||| | ||| ||||| ||| ||| | |||| ||||||||| ||||||||||||| ||||||    
T  2550467 ttatcat-gtattattttaattgtttaaaaaaacatatcatagtgtctgtaatttaaaaatgaaaagtaaaccctccc 2550391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 104 - 320
Target Start/End: Original strand, 36363051 - 36363268
Alignment:
Q  104 ggtttagaaggg-aagagaggagagggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactatt 202  Q
    |||||||||||| ||  |||| ||| ||||||||||||| |||||| | || |||||  || | |||||| |||||||||| | |||| |||||| | ||    
T  36363051 ggtttagaaggggaatggaggggagagtttaattttcttgtttaaactacgtactatataacatgtttttctaaaataaatcaagtgtcattgaagtttt 36363150  T
Q  203 atatgattgtttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaatcctcccatccctttctctc 302  Q
    |||| |||||||||||| |||||||||||||||| |||||  ||| | | | | |||||||||||| |||||||||| ||  ||| | |||||| | |||    
T  36363151 atatcattgtttatcatgctaatatgttaactttctaaaagacattttatagtatccgtaatttaaaaatgaaaagtgaactctctcctcccttcccctc 36363250  T
Q  303 ataaatcctgcatccaaa 320  Q
     |||| ||| ||||||||    
T  36363251 ctaaaccctccatccaaa 36363268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 212 - 328
Target Start/End: Complemental strand, 14245204 - 14245088
Alignment:
Q  212 tttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaatcctcccatccctttctctcataaatcct 311  Q
    ||||||||  ||||||||||||||| |||||| ||| ||||| |||||||||||||| || ||||||||||||||||| |||||| | ||| |||| |||    
T  14245204 tttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccgtaatttaaaaaagaaaagtaaatcctcccctcccttcccctcctaaaccct 14245105  T
Q  312 gcatccaaatacaccct 328  Q
      ||||||| |||||||    
T  14245104 caatccaaacacaccct 14245088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 167 - 325
Target Start/End: Complemental strand, 9798773 - 9798615
Alignment:
Q  167 gtttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaattt 266  Q
    |||||| | ||||||||||  |||||||||| ||||||||||| |||| ||||  ||| || || |||||||||||| ||| ||  | | ||||||||||    
T  9798773 gtttttcttaaataaattaattgtgattgaagtattatatgatcgtttttcatgttaaaatattgactttttaaaaaacatttcgtagtatccgtaattt 9798674  T
Q  267 aacaatgaaaagtaaatcctcccatccctttctctcataaatcctgcatccaaatacac 325  Q
    || |||||||||||||  ||| |||||||||  ||| |||||||| |||||||| ||||    
T  9798673 aaaaatgaaaagtaaactctcacatcccttttcctcctaaatcctccatccaaacacac 9798615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 167 - 289
Target Start/End: Complemental strand, 17024385 - 17024263
Alignment:
Q  167 gtttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaattt 266  Q
    |||||| |||||||||||| ||  ||||||| ||||||||||| |||| ||||  ||||||| |||||||||||| | ||| ||| |||||| | |||||    
T  17024385 gtttttctaaaataaattaagtacgattgaagtattatatgatcgtttttcatgttaatatgataactttttaaagaacatttcataatgtctgcaattt 17024286  T
Q  267 aacaatgaaaagtaaatcctccc 289  Q
    || ||||||||||||||| ||||    
T  17024285 aaaaatgaaaagtaaatcatccc 17024263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 168 - 285
Target Start/End: Complemental strand, 16501950 - 16501833
Alignment:
Q  168 tttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaattta 267  Q
    ||||| |||||||||| | |||||||| || | |||||||||  ||||| ||  |||||||||||||||| ||||| ||| ||| |||||||||||||||    
T  16501950 tttttctaaaataaatcaagtgtgattaaagttttatatgatcatttattatgttaatatgttaacttttaaaaaaacatttcataatgtccgtaattta 16501851  T
Q  268 acaatgaaaagtaaatcc 285  Q
    | |||||||| |||||||    
T  16501850 aaaatgaaaactaaatcc 16501833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 167 - 243
Target Start/End: Complemental strand, 10072808 - 10072732
Alignment:
Q  167 gtttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaatatgttaactttttaaaaa 243  Q
    |||||| |||||||||||| || |||||||| ||||||||||| |||||||||  ||||||||||||||||||||||    
T  10072808 gtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttaaaaa 10072732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 181 - 277
Target Start/End: Complemental strand, 20147013 - 20146917
Alignment:
Q  181 aattatgtgtgattgaactattatatgattgtttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaa 277  Q
    ||||| ||||||||||| ||||||||||| | |||||||  |||||||||||||||||||||| ||| ||| | || ||||||||||| ||||||||    
T  20147013 aattaagtgtgattgaaatattatatgatcgcttatcatgttaatatgttaactttttaaaaaacatttcatagtgaccgtaatttaaaaatgaaaa 20146917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 226 - 326
Target Start/End: Original strand, 1657955 - 1658055
Alignment:
Q  226 atgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaatcctcccatccctttctctcataaatcctgcatccaaatacac 325  Q
    |||||||||||||||||| ||| | | | |||||||||||||| ||||||||||||| |||||| |||||| | ||| |||| ||| |||||||| ||||    
T  1657955 atgttaactttttaaaaaacattttatagtgtccgtaatttaaaaatgaaaagtaaaccctcccctcccttcccctcctaaaccctccatccaaacacac 1658054  T
Q  326 c 326  Q
    |    
T  1658055 c 1658055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 167 - 333
Target Start/End: Original strand, 10476111 - 10476277
Alignment:
Q  167 gtttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaattt 266  Q
    |||||| |||||||||||| ||||||||||| |||||||| || |||||||||  |||||||||   ||||| | ||  || ||| | ||  ||||||||    
T  10476111 gtttttctaaaataaattaagtgtgattgaagtattatataatcgtttatcatcttaatatgtttttttttttataaatatttcatagtggtcgtaattt 10476210  T
Q  267 aacaatgaaaagtaaatcctcccatccctttctctcataaatcctgcatccaaatacaccctaaagt 333  Q
    || ||| | |||||||  ||||| |||||| | ||| |||| ||| |||||||| ||||||||||||    
T  10476211 aaaaattataagtaaacactcccctcccttcccctcctaaaccctccatccaaacacaccctaaagt 10476277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 113 - 219
Target Start/End: Original strand, 40815326 - 40815431
Alignment:
Q  113 gggaagagaggagagggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgt 212  Q
    |||||| || |||||| |||| |||||||||||||||| |  |||||  || | ||||||||||||||||  | ||||||||||| |||||||| |||||    
T  40815326 gggaagggaagagaggatttacttttcttttttaaattacagactatataacatgtttttataaaataaaaaa-gtgtgattgaaatattatataattgt 40815424  T
Q  213 ttatcat 219  Q
    |||||||    
T  40815425 ttatcat 40815431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 200 - 289
Target Start/End: Original strand, 22023483 - 22023574
Alignment:
Q  200 attatatgattgtttatcatactaatatgttaac-tttttaaaaagcatctca-caatgtccgtaatttaacaatgaaaagtaaatcctccc 289  Q
    |||||||||| |||||||||  |||||||||||| |||||||||| ||| |||  ||| |||||||||||  ||||||||||||| ||||||    
T  22023483 attatatgatcgtttatcatgttaatatgttaacttttttaaaaaacatttcataaatatccgtaatttataaatgaaaagtaaaccctccc 22023574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 255 - 320
Target Start/End: Complemental strand, 10650502 - 10650435
Alignment:
Q  255 tgtccgtaatttaacaatgaaaagtaaatcctcccatcccttt--ctctcataaatcctgcatccaaa 320  Q
    |||||||||||||| ||| |||||||||||||||| |||||||  | ||| |||||||| ||||||||    
T  10650502 tgtccgtaatttaaaaataaaaagtaaatcctcccctcccttttcccctcctaaatcctccatccaaa 10650435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 135 - 231
Target Start/End: Original strand, 11756928 - 11757024
Alignment:
Q  135 ttttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaatatgtta 231  Q
    |||| ||||||||||| ||||||||  || | |||| | |||||||||||| |||||||| || |||||||||||  ||||| ||  ||||||||||    
T  11756928 ttttattttttaaattacgaactatataacatgtttctctaaaataaattaagtgtgattaaagtattatatgatcatttatgatgttaatatgtta 11757024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 128 - 243
Target Start/End: Original strand, 14681513 - 14681627
Alignment:
Q  128 ggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaatat 227  Q
    |||| |||||||||||||||||| |  | |||  || | |||||| ||||||||||||  ||||||||||  | ||||||| ||||||||||  ||||||    
T  14681513 ggttaaattttcttttttaaattacagattatataacatgtttttttaaaataaattaaatgtgattgaaggaatatatgactgtttatcatgttaatat 14681612  T
Q  228 gttaactttttaaaaa 243  Q
      ||||||||||||||    
T  14681613 -ataactttttaaaaa 14681627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 240 - 330
Target Start/End: Original strand, 14245202 - 14245292
Alignment:
Q  240 aaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaatcctcccatccctttctctcataaatcctgcatccaaatacaccctaa 330  Q
    |||| ||| ||||| |||||||||||||| ||||||||  ||| |||||| |||||| | ||| |||| |||  ||||||| |||||||||    
T  14245202 aaaaacatttcacagtgtccgtaatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaa 14245292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 88; Significance: 5e-42; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 111 - 330
Target Start/End: Complemental strand, 41497174 - 41496955
Alignment:
Q  111 aagggaagagaggagagggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgatt 210  Q
    |||||||| |||| ||||||||| |||||||||||||||| || |||||  || | |||||| |||||||||||| |||||||||||  ||||||||||     
T  41497174 aagggaagggaggggagggtttacttttcttttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagaattatatgatc 41497075  T
Q  211 gtttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaatcctcccatccctttctctcataaatcc 310  Q
     ||||||||  ||||||||||| |||||||||| ||| ||  | |||||||||||||| ||| ||||||||||| |||| |||||| | ||| |||| ||    
T  41497074 atttatcatgttaatatgttaaatttttaaaaaacatttcctattgtccgtaatttaaaaataaaaagtaaatcatcccctcccttcccctcctaaaccc 41496975  T
Q  311 tgcatccaaatacaccctaa 330  Q
    | |||||||| |||||||||    
T  41496974 tccatccaaacacaccctaa 41496955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 113 - 288
Target Start/End: Complemental strand, 33655323 - 33655148
Alignment:
Q  113 gggaagagaggagagggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgt 212  Q
    ||||||||||| ||||||||| ||||||||||||||||  |  ||||  || | |||||| |||||||||||| ||||||||||| |||||||||||  |    
T  33655323 gggaagagaggcgagggtttacttttcttttttaaattatgggctatataacatgtttttctaaaataaattaagtgtgattgaagtattatatgatcat 33655224  T
Q  213 ttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaatcctcc 288  Q
    |||||||  |||||||||||||||||||||| ||| ||| | |||||||||||||| ||||||||||||| |||||    
T  33655223 ttatcatgttaatatgttaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaaccctcc 33655148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 168 - 289
Target Start/End: Complemental strand, 34235167 - 34235046
Alignment:
Q  168 tttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaattta 267  Q
    ||||| |||||||||||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||| ||| ||| ||| | |||||||||||||    
T  34235167 tttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatattaatatgttaactttttataaaacatttcatagtgtccgtaattta 34235068  T
Q  268 acaatgaaaagtaaatcctccc 289  Q
    | |||||||||||||| |||||    
T  34235067 aaaatgaaaagtaaattctccc 34235046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 113 - 289
Target Start/End: Complemental strand, 1051713 - 1051539
Alignment:
Q  113 gggaagagaggagagggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgt 212  Q
    |||||| ||||||||| |||| |||||||||||||||| ||||||||  ||   |||||| |||||||||||| |||||||||||  |||||||||||||    
T  1051713 gggaagggaggagaggatttatttttcttttttaaattacgaactatataacctgtttttctaaaataaattaagtgtgattgaagcattatatgattgt 1051614  T
Q  213 ttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaatcctccc 289  Q
    |||||||  |||||||||||||||||||||| ||| |||   |||||||||||||| ||||||| || || ||||||    
T  1051613 ttatcat-gtaatatgttaactttttaaaaaacatttca-tgtgtccgtaatttaaaaatgaaatgttaaccctccc 1051539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 113 - 331
Target Start/End: Complemental strand, 13771161 - 13770945
Alignment:
Q  113 gggaagagaggagagggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgt 212  Q
    |||||| |||| ||| ||||| ||||| |||||||||| || |||||  || | |||||| |||||||||||| ||||||||  | | |||||| |||||    
T  13771161 gggaagggaggtgagagtttacttttcgtttttaaattacggactatataacatgtttttttaaaataaattaagtgtgattcgagtgttatatcattgt 13771062  T
Q  213 ttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaatcctcccatccctttctctcataaatcctg 312  Q
    |||||||  |||||||||||||||||| ||   || | | | |||||||||||||| ||| | |||||||||||||| |||||| | ||| ||||||||     
T  13771061 ttatcatgttaatatgttaactttttataa--tattttatagtgtccgtaatttaaaaataataagtaaatcctcccctcccttcccctcctaaatcctc 13770964  T
Q  313 catccaaatacaccctaaa 331  Q
     ||||||| ||||||||||    
T  13770963 aatccaaacacaccctaaa 13770945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 167 - 330
Target Start/End: Complemental strand, 40196693 - 40196530
Alignment:
Q  167 gtttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaattt 266  Q
    |||||| |||||||||||| ||||||||||| ||||||||||||||||||||   | |||||||||||||||| ||| ||| | | | |||||||||||     
T  40196693 gtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcaggttgatatgttaactttttataaaacattttatagtgtccgtaattc 40196594  T
Q  267 aacaatgaaaagtaaatcctcccatccctttctctcataaatcctgcatccaaatacaccctaa 330  Q
    || ||||||||||||| |||||  |||||| | |||  ||| ||| |||||||| |||||||||    
T  40196593 aaaaatgaaaagtaaaccctcctctcccttcccctcccaaaccctccatccaaacacaccctaa 40196530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 174 - 320
Target Start/End: Complemental strand, 4833685 - 4833539
Alignment:
Q  174 taaaataaattatgtgtgattgaactattatatgattgtttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatg 273  Q
    ||||||||||||  ||||||| || |||||||||||||||||||||  ||||| |||||||||||| ||| ||| ||| | |||| ||||||||| ||||    
T  4833685 taaaataaattaaatgtgatttaagtattatatgattgtttatcatgttaataggttaactttttataaaacatttcatagtgtctgtaatttaaaaatg 4833586  T
Q  274 aaaagtaaatcctcccatccctttctctcataaatcctgcatccaaa 320  Q
    ||||||||| |||||| |||||| | ||| |||| ||| ||||||||    
T  4833585 aaaagtaaaccctcccctcccttcccctcctaaaccctccatccaaa 4833539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 167 - 289
Target Start/End: Complemental strand, 24970326 - 24970204
Alignment:
Q  167 gtttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaattt 266  Q
    |||||| |||||||||||| ||||||||||| ||||||||||| ||||||||   ||||||||||||||||||||||  || ||| | | ||||||||||    
T  24970326 gtttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcaagttaatatgttaactttttaaaaaatatttcatagtatccgtaattt 24970227  T
Q  267 aacaatgaaaagtaaatcctccc 289  Q
    || ||||||||||||||| ||||    
T  24970226 aaaaatgaaaagtaaatcatccc 24970204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 191 - 328
Target Start/End: Original strand, 18231693 - 18231830
Alignment:
Q  191 gattgaactattatatgattgtttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaatcctccca 290  Q
    ||||||| ||||||||||| |||||||||  |||||||||||||||||||||| ||| ||| | |||  ||||||||| ||||||||||||||||||||     
T  18231693 gattgaagtattatatgatcgtttatcatgttaatatgttaactttttaaaaaacatttcatagtgtttgtaatttaaaaatgaaaagtaaatcctcccc 18231792  T
Q  291 tccctttctctcataaatcctgcatccaaatacaccct 328  Q
    |||||| | ||| ||||  || |||||||| |||||||    
T  18231793 tcccttcccctcctaaacgctccatccaaacacaccct 18231830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 125 - 328
Target Start/End: Original strand, 47390896 - 47391100
Alignment:
Q  125 gagggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatga-ttgtttatcatacta 223  Q
    ||||||||| ||||||||||||||||  |||||||  || | |||||| ||||||| ||||  |||||||||| |||||||||| |||||||||||  ||    
T  47390896 gagggtttacttttcttttttaaattatgaactatataacatgtttttctaaaatacattaattgtgattgaagtattatatgacttgtttatcatgtta 47390995  T
Q  224 atatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaatcctcccatccctttctctcataaatcctgcatccaaatac 323  Q
    |||||||||| |||||||||   | | | | |||||||||||||| ||||||||  |||  ||||| |||||| | ||| |||| ||| |||||||| ||    
T  47390996 atatgttaacattttaaaaaatgttttatagtgtccgtaatttaaaaatgaaaaccaaactctcccctcccttcccctcttaaaccctccatccaaacac 47391095  T
Q  324 accct 328  Q
    |||||    
T  47391096 accct 47391100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 87 - 294
Target Start/End: Complemental strand, 34228560 - 34228352
Alignment:
Q  87 gtgtgtttgaatcgaaaggtttagaagg-gaagagaggagagggtttaattttcttttttaaattgcg-aactatgcaataagtttttataaaataaatt 184  Q
    |||||||||||| ||| ||||||| ||| |||| |||| |||| |||| ||||| |||| ||||| || ||||||  || | |||||| |||||||||||    
T  34228560 gtgtgtttgaattgaa-ggtttaggaggagaagggaggggaggatttacttttcattttaaaattacggaactatataacatgtttttctaaaataaatt 34228462  T
Q  185 atgtgtgattgaactattatatgattgtttatcatactaatatgttaact-ttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaat 283  Q
    | ||||||||||| ||||||||||||| |||||||| ||||||||||||| ||||| ||| ||| ||| | |||||||||||  | |||| |||||||||    
T  34228461 aagtgtgattgaagtattatatgattgcttatcatattaatatgttaacttttttataaaacat-tcatagtgtccgtaattacaaaatgtaaagtaaat 34228363  T
Q  284 cctcccatccc 294  Q
    | |||| ||||    
T  34228362 cttcccctccc 34228352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 113 - 296
Target Start/End: Original strand, 25887221 - 25887405
Alignment:
Q  113 gggaagagaggagagggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgt 212  Q
    |||||| |||| |||| |||  ||||||||| |||||  || |||||  || | |||||| |||||||||||| ||||||||| | ||||||||||||||    
T  25887221 gggaagggaggggaggatttgtttttcttttataaatcacggactatataacatgtttttctaaaataaattaagtgtgattggagtattatatgattgt 25887320  T
Q  213 ttatcatactaatatgttaactttt-taaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaatcctcccatccctt 296  Q
    |||||||| ||||||||||||||||  ||||| ||| |||  || | |||||||||| ||||||| |||||  ||||| ||||||    
T  25887321 ttatcatattaatatgttaacttttaaaaaaaacatttcatgattttcgtaatttaaaaatgaaatgtaaactctcccctccctt 25887405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 125 - 325
Target Start/End: Original strand, 43230277 - 43230476
Alignment:
Q  125 gagggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaa 224  Q
    ||||||||| |||||||||||||||| || | |||  || | |||||| |||||||||||| ||| |||||||  |||||| ||| |||||||||  |||    
T  43230277 gagggtttacttttcttttttaaattacggattatataacatgtttttctaaaataaattaagtgcgattgaagaattatacgatcgtttatcatgttaa 43230376  T
Q  225 tatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaatcctcccatccctttctctcataaatcctgcatccaaataca 324  Q
    ||||||||||||| |||||  |  ||| | |||||||||||||| ||| |||||||||  ||||| | | || |||||||||| ||| |||||||| |||    
T  43230377 tatgttaacttttaaaaaaaaaattca-agtgtccgtaatttaaaaataaaaagtaaactctccccttctttcctctcataaaccctacatccaaacaca 43230475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 167 - 268
Target Start/End: Complemental strand, 22163270 - 22163170
Alignment:
Q  167 gtttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaattt 266  Q
    |||||| |||||||||||| ||||||||||| ||||||||||| |||||||||  ||||||||| ||||| |||||| ||| ||| | ||||||||||||    
T  22163270 gtttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcatgttaatatgtt-actttctaaaaaacatttcatagtgtccgtaattt 22163172  T
Q  267 aa 268  Q
    ||    
T  22163171 aa 22163170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 167 - 268
Target Start/End: Complemental strand, 22221978 - 22221878
Alignment:
Q  167 gtttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaattt 266  Q
    |||||| |||||||||||| ||||||||||| ||||||||||| |||||||||  ||||||||| ||||| |||||| ||| ||| | ||||||||||||    
T  22221978 gtttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcatgttaatatgtt-actttctaaaaaacatttcatagtgtccgtaattt 22221880  T
Q  267 aa 268  Q
    ||    
T  22221879 aa 22221878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 192 - 328
Target Start/End: Complemental strand, 30592389 - 30592253
Alignment:
Q  192 attgaactattatatgattgtttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaatcctcccat 291  Q
    |||||| |||||||||||| |||||||||  | ||| | || |||||||||| ||| | | | |||| ||||||||| || |||||||||  |||||| |    
T  30592389 attgaagtattatatgattatttatcatatgattatttcaattttttaaaaatcattttatagtgtctgtaatttaaaaaagaaaagtaagccctccctt 30592290  T
Q  292 ccctttctctcataaatcctgcatccaaatacaccct 328  Q
    ||||||| ||| |||||||| ||||||||||||||||    
T  30592289 ccctttccctcctaaatcctccatccaaatacaccct 30592253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 76 - 218
Target Start/End: Complemental strand, 39856117 - 39855975
Alignment:
Q  76 aaactttaagtgtgtgtttgaatcgaaaggtttagaaggg-aagagaggagagggtttaattttcttttttaaattgcgaactatgcaataagtttttat 174  Q
    |||||||||| ||||||||| || ||  ||||||| |||| ||| |||| ||||||||| |||||||||||||||| || |||||  || | |||||| |    
T  39856117 aaactttaagggtgtgtttggattgag-ggtttaggaggggaagggaggggagggtttacttttcttttttaaattacggactatataacatgtttttct 39856019  T
Q  175 aaaataaattatgtgtgattgaactattatatgattgtttatca 218  Q
    ||||||||||| |||||| | || |||||||||||  |||||||    
T  39856018 aaaataaattaagtgtgacttaagtattatatgatcatttatca 39855975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 187 - 284
Target Start/End: Original strand, 10315736 - 10315833
Alignment:
Q  187 gtgtgattgaactattatatgattgtttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaatc 284  Q
    ||||||||||| |||||||| || ||||||| |  ||||||||||| |||||||||| ||| ||| | |||||||| ||||| |||||||| ||||||    
T  10315736 gtgtgattgaagtattatataatcgtttatcttgttaatatgttaaatttttaaaaaacatttcatagtgtccgtattttaaaaatgaaaaataaatc 10315833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 174 - 282
Target Start/End: Complemental strand, 32872935 - 32872827
Alignment:
Q  174 taaaataaattatgtgtgattgaactattatatgattgtttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatg 273  Q
    |||||||||||| || | ||||||  || |||||| ||||||||||  ||||||||||||||||||||||| || | | ||| | |||||||||| || |    
T  32872935 taaaataaattaagtttaattgaaagatgatatgagtgtttatcatgttaatatgttaactttttaaaaagtattttataatattcgtaatttaaaaaag 32872836  T
Q  274 aaaagtaaa 282  Q
    |||||||||    
T  32872835 aaaagtaaa 32872827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 135 - 237
Target Start/End: Original strand, 41008233 - 41008334
Alignment:
Q  135 ttttcttttttaaattgcgaactatgcaataagtttttat-aaaataaattatgtgtgattgaactattatatgattgtttatcatactaatatgttaac 233  Q
    |||||||||||||||| || |||||  || | |||||| | ||||||||||| ||||||||||| |  ||||||||||||||||||  ||||||||||||    
T  41008233 ttttcttttttaaattacggactatataacatgttttttttaaaataaattaagtgtgattgaagt--tatatgattgtttatcatgttaatatgttaac 41008330  T
Q  234 tttt 237  Q
    ||||    
T  41008331 tttt 41008334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 168 - 243
Target Start/End: Complemental strand, 13425280 - 13425205
Alignment:
Q  168 tttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaatatgttaactttttaaaaa 243  Q
    |||||| ||||||||||| |||||| |||| ||| |||||||||||||||||  ||||||||| |||||| |||||    
T  13425280 tttttaaaaaataaattaagtgtgaatgaagtataatatgattgtttatcatgttaatatgttgacttttgaaaaa 13425205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 126 - 282
Target Start/End: Original strand, 42306376 - 42306528
Alignment:
Q  126 agggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaat 225  Q
    ||||||| ||||||||||||||||| |  |||||  || | || ||| |||||||||||| | ||||||| | |||||||||    ||||| |   ||||    
T  42306376 agggtttgattttcttttttaaattaccgactatataacatgtatttctaaaataaattaagcgtgattggagtattatatg----tttatgaggttaat 42306471  T
Q  226 atgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaa 282  Q
    ||| |||||||||||||| ||| ||| | |||||||||||||| |||||||| ||||    
T  42306472 atgctaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaattaaa 42306528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 120 - 281
Target Start/End: Original strand, 17852907 - 17853067
Alignment:
Q  120 gaggagagggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgtttatcat 219  Q
    |||| ||||| ||| |||||||||||||||| || | ||   || | |||||| |||||||||||| ||||||||||  ||||||||||| |||||||||    
T  17852907 gaggggagggattacttttcttttttaaattacggattaaataacatgtttttctaaaataaattaagtgtgattgaggtattatatgatcgtttatcat 17853006  T
Q  220 actaatatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaa 281  Q
      |  ||| ||| ||||||||||| | | ||| | ||  |||||||||| ||||||||||||    
T  17853007 gttgttattttatctttttaaaaa-cttttcatagtgctcgtaatttaaaaatgaaaagtaa 17853067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 128 - 239
Target Start/End: Complemental strand, 37417833 - 37417722
Alignment:
Q  128 ggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaatat 227  Q
    |||||| ||||| |||||||||  || |||||  || | ||||||  ||| ||| ||| ||||||||||| ||||||||||| |||||||||   |||||    
T  37417833 ggtttacttttcatttttaaataacggactatataacatgtttttcaaaattaagttaagtgtgattgaagtattatatgatcgtttatcatgtgaatat 37417734  T
Q  228 gttaacttttta 239  Q
    ||||||||||||    
T  37417733 gttaacttttta 37417722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 129 - 219
Target Start/End: Original strand, 26365813 - 26365903
Alignment:
Q  129 gtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgtttatcat 219  Q
    ||||| |||||||||||| ||| | ||||||  || |  ||||| ||||||||| || ||||||||||| |||||||||||||||| ||||    
T  26365813 gtttacttttcttttttatattacaaactatataacatatttttctaaaataaactaggtgtgattgaagtattatatgattgtttctcat 26365903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 135 - 243
Target Start/End: Complemental strand, 40572427 - 40572319
Alignment:
Q  135 ttttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaatatgttaact 234  Q
    |||| ||||| ||||| || |||||  |||| |||| | |||||||||||| | |||||| || ||||||||||   ||||||||  |||||||||||||    
T  40572427 ttttatttttaaaattacggactatataatatgtttctctaaaataaattaagcgtgattaaagtattatatgaccttttatcatgttaatatgttaact 40572328  T
Q  235 ttttaaaaa 243  Q
    ||| |||||    
T  40572327 tttaaaaaa 40572319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 168 - 219
Target Start/End: Complemental strand, 18063721 - 18063670
Alignment:
Q  168 tttttataaaataaattatgtgtgattgaactattatatgattgtttatcat 219  Q
    ||||| |||||||||||| ||||||||||| |||||||||||  ||||||||    
T  18063721 tttttttaaaataaattaagtgtgattgaagtattatatgatcatttatcat 18063670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 268
Target Start/End: Complemental strand, 31553287 - 31553242
Alignment:
Q  223 aatatgttaactttttaaaaagcatctcacaatgtccgtaatttaa 268  Q
    ||||||||||||||||||||| ||| ||| ||||||||| ||||||    
T  31553287 aatatgttaactttttaaaaaacatttcataatgtccgttatttaa 31553242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 243
Target Start/End: Original strand, 42087085 - 42087154
Alignment:
Q  174 taaaataaattatgtgtgattgaactattatatgattgtttatcatactaatatgttaactttttaaaaa 243  Q
    |||||||||||| |||| |||||| |||||||| || |||| |||   ||||||| ||||||||||||||    
T  42087085 taaaataaattaagtgtaattgaattattatataatcgtttgtcacgttaatatgctaactttttaaaaa 42087154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 240
Target Start/End: Complemental strand, 47229973 - 47229920
Alignment:
Q  187 gtgtgattgaactattatatgattgtttatcatactaatatgttaactttttaa 240  Q
    ||||||||||| ||||| |||||||||||||||  |||||||||  ||||||||    
T  47229973 gtgtgattgaattattacatgattgtttatcatgttaatatgttcgctttttaa 47229920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 330
Target Start/End: Complemental strand, 48881633 - 48881556
Alignment:
Q  253 aatgtccgtaatttaacaatgaaaagtaaatcctcccatccctttctctcataaatcctgcatccaaatacaccctaa 330  Q
    |||||||||||||||| || |||||||||  | |||| |||||| | ||| |||| ||| |||||||| |||||||||    
T  48881633 aatgtccgtaatttaaaaaagaaaagtaagccatcccctcccttcccctcctaaaccctccatccaaacacaccctaa 48881556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 256 - 328
Target Start/End: Original strand, 39856037 - 39856109
Alignment:
Q  256 gtccgtaatttaacaatgaaaagtaaatcctcccatccctttctctcataaatcctgcatccaaatacaccct 328  Q
    ||||||||||||| || |||||||||| |||||| |||||| | ||| |||| |||  ||||||| |||||||    
T  39856037 gtccgtaatttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 39856109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 85; Significance: 3e-40; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 113 - 325
Target Start/End: Complemental strand, 9719245 - 9719034
Alignment:
Q  113 gggaagagaggagagggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgt 212  Q
    ||||||||||| | |||||||||||||||||||||||| || |||||  || | | |||| |||| ||||||  ||||||||||| ||||||||||||||    
T  9719245 gggaagagaggggtgggtttaattttcttttttaaattccggactatataacatgctttt-taaattaaatttagtgtgattgaagtattatatgattgt 9719147  T
Q  213 ttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaatcctcccatccctttctctcataaatcctg 312  Q
    |||||| | |||||||||||||||||||||| |||  || | |||||||||||||| |||||||| ||||||||||| |||||| | ||| |||| |||     
T  9719146 ttatcaaattaatatgttaactttttaaaaaacattccatagtgtccgtaatttaaaaatgaaaaataaatcctcccctcccttcccctcctaaaccctc 9719047  T
Q  313 catccaaatacac 325  Q
     ||||||| ||||    
T  9719046 aatccaaacacac 9719034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 125 - 328
Target Start/End: Complemental strand, 30487508 - 30487306
Alignment:
Q  125 gagggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaa 224  Q
    ||||||||| |||| ||||||||| | || |||||  || | ||||||||||||||||| | ||||||||||| |||||||| ||||||||||||  |||    
T  30487508 gagggtttagttttattttttaaactacggactatataacatgtttttataaaataaatcaagtgtgattgaagtattatattattgtttatcatgttaa 30487409  T
Q  225 tatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaatcctcccatccctttctctcataaatcctgcatccaaataca 324  Q
    |||||| |||||||||||  ||| ||| | ||||| ||||||||||||||||||| || |||||| |||||| | ||| |||| ||| |||||||| |||    
T  30487408 tatgttgactttttaaaagacatttcatactgtcc-taatttaacaatgaaaagtgaaccctcccctcccttcccctcctaaaccctccatccaaacaca 30487310  T
Q  325 ccct 328  Q
    ||||    
T  30487309 ccct 30487306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 129 - 328
Target Start/End: Original strand, 33235996 - 33236194
Alignment:
Q  129 gtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaatatg 228  Q
    ||||| |||||||||||||||| || |||||  || | |||||| |||||||||||| |  ||||||||  ||||||||||||||||||||  |||||||    
T  33235996 gtttacttttcttttttaaattacggactatataacatgtttttctaaaataaattaagactgattgaagaattatatgattgtttatcatgttaatatg 33236095  T
Q  229 ttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaatcctcccatccctttctctcataaatcctgcatccaaatacaccct 328  Q
    |||||||||||||||  || ||| | |||||||||||||| ||||||||||||   ||||| ||| || ||||||||||  || ||||||||||||||||    
T  33236096 ttaactttttaaaaa-aatttcatagtgtccgtaatttaaaaatgaaaagtaatctctcccctcctttcctctcataaactctccatccaaatacaccct 33236194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 110 - 296
Target Start/End: Complemental strand, 9721355 - 9721170
Alignment:
Q  110 gaagggaagagaggagagggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgat 209  Q
    ||||| |||||||| | |||||||||||||||||||||||| || || ||  || | |||||| |||| |||| |  ||||||||||| |||||||||||    
T  9721355 gaaggtaagagaggggtgggtttaattttcttttttaaattccggaccatataacatgttttt-taaattaaagttagtgtgattgaagtattatatgat 9721257  T
Q  210 tgtttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaatcctcccatccctt 296  Q
    ||||||||| | |||||||||||||||||||||| |||  || | |||||||||||||| |||||||| |||| |||||| ||||||    
T  9721256 tgtttatcaaattaatatgttaactttttaaaaaacattccatagtgtccgtaatttaaaaatgaaaaataaaccctcccctccctt 9721170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 175 - 281
Target Start/End: Complemental strand, 4097665 - 4097559
Alignment:
Q  175 aaaataaattatgtgtgattgaactattatatgattgtttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatga 274  Q
    ||||||||||| ||||||||||| ||||||||||| |||||||||  |||||||||||||||||||||| ||| ||| | |||||||||||||| ||| |    
T  4097665 aaaataaattaagtgtgattgaagtattatatgatcgtttatcatgttaatatgttaactttttaaaaaacatttcaaagtgtccgtaatttaaaaatta 4097566  T
Q  275 aaagtaa 281  Q
    |||||||    
T  4097565 aaagtaa 4097559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 178 - 289
Target Start/End: Original strand, 1300714 - 1300825
Alignment:
Q  178 ataaattatgtgtgattgaactattatatgattgtttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaa 277  Q
    |||||||| ||||||||||| ||||||||||||||||||||   |||||||||||||||||| |||  || ||| | |||||||||||||| ||||||||    
T  1300714 ataaattaagtgtgattgaagtattatatgattgtttatcaggttaatatgttaactttttataaaatatttcatattgtccgtaatttaaaaatgaaaa 1300813  T
Q  278 gtaaatcctccc 289  Q
    ||||| ||||||    
T  1300814 gtaaaccctccc 1300825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 136 - 289
Target Start/End: Complemental strand, 21607036 - 21606883
Alignment:
Q  136 tttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaatatgttaactt 235  Q
    |||| |||||||||| | ||||||   ||| |||||| |||||||||| | |||||| |||| ||||||| ||| |||||||||  ||||||||||||||    
T  21607036 tttcgtttttaaattacaaactatattatatgtttttctaaaataaataaagtgtgactgaagtattatacgatcgtttatcatgttaatatgttaactt 21606937  T
Q  236 tttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaatcctccc 289  Q
    |||| ||| ||| ||| | | |||||||||||| ||||||||||||| ||||||    
T  21606936 tttataaaacatttcatagtttccgtaatttaaaaatgaaaagtaaaccctccc 21606883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 113 - 289
Target Start/End: Original strand, 31849139 - 31849315
Alignment:
Q  113 gggaagagaggagagggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgt 212  Q
    |||||| |||| ||||||||| |||||||||||||| | |  |||||  || |  ||||| |||||||||| | ||||||||||| |||||||| |||||    
T  31849139 gggaagggaggggagggtttagttttcttttttaaactacagactatataacatatttttctaaaataaatcaagtgtgattgaagtattatattattgt 31849238  T
Q  213 ttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaatcctccc 289  Q
    ||||||   ||||||||||| |||||||||  ||| | | | |||||||||||||| |||||||||| || ||||||    
T  31849239 ttatcacgttaatatgttaattttttaaaagacattttatagtgtccgtaatttaaaaatgaaaagtgaaccctccc 31849315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 113 - 331
Target Start/End: Original strand, 1390348 - 1390566
Alignment:
Q  113 gggaagagaggagagggtttaattttcttttttaaattgcgaactatgcaataagttt-ttataaaataaattatgtgtgattgaactattatatgattg 211  Q
    ||||||||  |||||  ||||||||||||||| ||||| || |||||| || | |||| || |||||||||||| || |||||||| |||||| ||||      
T  1390348 gggaagagcagagagaatttaattttctttttaaaattacggactatgtaacatgtttattctaaaataaattaagtttgattgaaatattat-tgatca 1390446  T
Q  212 tttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaatcctcccatccctttctctcataaatcct 311  Q
    ||||||||  ||||||||||||||||||||||  || ||| | |||| ||||||||| ||||||||||||| || | | ||| || | ||| |||| |||    
T  1390447 tttatcatgttaatatgttaactttttaaaaaatatttcatagtgtcagtaatttaaaaatgaaaagtaaaacccctcctccattcccctcctaaaccct 1390546  T
Q  312 gcatccaaatacaccctaaa 331  Q
     |||||||| ||||| ||||    
T  1390547 tcatccaaacacaccttaaa 1390566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 130 - 283
Target Start/End: Complemental strand, 2892801 - 2892649
Alignment:
Q  130 tttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaatatgt 229  Q
    |||| |||||||||||||| | || |||||  || | |||||| |||||||||||  ||||||||||| |||||||||||||||||||||  || ||| |    
T  2892801 tttacttttcttttttaaactacggactatataacacgtttttctaaaataaatttagtgtgattgaaatattatatgattgtttatcatgttattattt 2892702  T
Q  230 taactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaat 283  Q
    ||| ||||||||||  |||||| | ||| |||||||||||||  ||||||||||    
T  2892701 taa-tttttaaaaaatatctcatagtgtgcgtaatttaacaacaaaaagtaaat 2892649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 188 - 295
Target Start/End: Original strand, 10818320 - 10818427
Alignment:
Q  188 tgtgattgaactattatatgattgtttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaatcctc 287  Q
    |||||||||| |||||||||||  ||||||||  |||||||||||  ||||||||| ||| ||| | |||||||||||||| ||||||||||||| ||||    
T  10818320 tgtgattgaagtattatatgatcatttatcatgttaatatgttaatattttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaaccctc 10818419  T
Q  288 ccatccct 295  Q
    || |||||    
T  10818420 ccctccct 10818427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 168 - 282
Target Start/End: Original strand, 1395720 - 1395834
Alignment:
Q  168 tttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaattta 267  Q
    |||||||||||||||||| ||||||||||| || || |||||  |||||||| |||||||||||| |||||||||| |||   ||| |||  ||||||||    
T  1395720 tttttataaaataaattaagtgtgattgaaataatacatgatcatttatcatgctaatatgttaattttttaaaaaacattctacagtgttagtaattta 1395819  T
Q  268 acaatgaaaagtaaa 282  Q
    | |||||||||||||    
T  1395820 aaaatgaaaagtaaa 1395834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 113 - 282
Target Start/End: Complemental strand, 19278252 - 19278080
Alignment:
Q  113 gggaagagaggagagggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgt 212  Q
    |||||| |||| ||||||||| |||||||||||||||| || |||||  || | |||||| |||||||||||  || |||||||| ||| ||||||| ||    
T  19278252 gggaagggaggggagggttta-ttttcttttttaaattacggactatataacatgtttttctaaaataaatttagtctgattgaagtatcatatgatcgt 19278154  T
Q  213 ttatcatacta----atatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaa 282  Q
    |||||||  ||    |||||| |||||||||||||  || | | | |||| ||||||||| |||||||||||||    
T  19278153 ttatcatgttaatatatatgtcaactttttaaaaaatattttatagtgtcagtaatttaaaaatgaaaagtaaa 19278080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 167 - 325
Target Start/End: Complemental strand, 5585463 - 5585304
Alignment:
Q  167 gtttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaattt 266  Q
    |||||| |||||||||||| ||||||||||| |||| ||| || |||||| ||  |||||||||| ||||||||||| ||| ||| | ||| ||||||||    
T  5585463 gtttttctaaaataaattaagtgtgattgaaatattgtataatcgtttattatgttaatatgttacctttttaaaaaacatttcatagtgttcgtaattt 5585364  T
Q  267 aacaatg-aaaagtaaatcctcccatccctttctctcataaatcctgcatccaaatacac 325  Q
    || || | |||||||||  || |||| |||| | ||| |||| ||| |||||||| ||||    
T  5585363 aaaaaagaaaaagtaaactcttccattccttcccctcctaaaccctccatccaaacacac 5585304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 167 - 331
Target Start/End: Original strand, 34176418 - 34176581
Alignment:
Q  167 gtttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaattt 266  Q
    |||||| |||||||||| | ||||||||| | ||||||| ||| |||||| ||  |||||||||||||||  |||||  || ||| | ||||||||||||    
T  34176418 gtttttctaaaataaatcaagtgtgattgcagtattatacgatcgtttattatgttaatatgttaactttaaaaaaaatatttcatagtgtccgtaattt 34176517  T
Q  267 aacaatgaaaagtaaatcctcccatccct-ttctctcataaatcctgcatccaaatacaccctaaa 331  Q
    || |||||||| ||||  ||| |||| || ||| |||||||| ||| |||||||| ||||| ||||    
T  34176518 aaaaatgaaaactaaa--ctctcatctctcttccctcataaaccctccatccaaacacaccataaa 34176581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 168 - 324
Target Start/End: Complemental strand, 10348958 - 10348804
Alignment:
Q  168 tttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaattta 267  Q
    ||||| |||||||| | | ||| ||||||| |||||||| || ||||||| || |||||||||||||||||||||   || ||| | | |||||||||||    
T  10348958 tttttttaaaataattcaagtgcgattgaagtattatattatcgtttatcgtattaatatgttaactttttaaaagatatttcatattatccgtaattta 10348859  T
Q  268 acaatgaaaagtaaatcctcccatccctttctctcataaatcctgcatccaaataca 324  Q
    | |||| ||||| |||| |||| |||| ||| |||||||| ||| ||| ||||||||    
T  10348858 aaaatg-aaagtgaatcatcccctccc-ttccctcataaaccctccattcaaataca 10348804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 167 - 243
Target Start/End: Original strand, 25741490 - 25741566
Alignment:
Q  167 gtttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaatatgttaactttttaaaaa 243  Q
    |||||| |||||||||||| | |||| |||| | ||||||||| |||||||||| || |||||||||||||||||||    
T  25741490 gtttttttaaaataaattaagcgtgactgaagttttatatgatcgtttatcatattattatgttaactttttaaaaa 25741566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 199 - 282
Target Start/End: Original strand, 2900025 - 2900108
Alignment:
Q  199 tattatatgattgtttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaa 282  Q
    |||||||||||||||||||||  |||||||||||||| ||| ||| ||| ||| | ||||  |||||||| |||||||||||||    
T  2900025 tattatatgattgtttatcatgttaatatgttaacttcttataaaacatttcatagtgtctataatttaaaaatgaaaagtaaa 2900108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 120 - 327
Target Start/End: Complemental strand, 16738204 - 16737997
Alignment:
Q  120 gaggagagggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgtttatcat 219  Q
    |||| ||| ||||| |||||||||||||||| |  | |||  || | |||||| ||||||||| || |||| ||| || ||||||||||| || ||||||    
T  16738204 gaggggagagtttacttttcttttttaaattacagattatataaaatgtttttctaaaataaagtaagtgttatttaagtattatatgatcgtatatcat 16738105  T
Q  220 actaatatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaatcctcccatccctttctctcataaatcctgcatccaa 319  Q
      || ||| |||| || | ||||| ||| ||| | | ||| |||||||| || |||||||||||| |||| || ||| ||||| |||| ||| |||||||    
T  16738104 gttattattttaatttatcaaaaaacatttcatagtttccataatttaaaaacgaaaagtaaatcttcccctctcttcctctcttaaaccctccatccaa 16738005  T
Q  320 atacaccc 327  Q
    | ||||||    
T  16738004 acacaccc 16737997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 113 - 219
Target Start/End: Complemental strand, 12811195 - 12811090
Alignment:
Q  113 gggaagagaggagagggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgt 212  Q
    ||||||||||| ||||| ||| ||||||| ||||||||    |||||  |||| |||||| |||||||||||| ||||||||||| ||  ||||||||||    
T  12811195 gggaagagaggggagggattacttttcttctttaaattagagactatataatatgtttttctaaaataaattaagtgtgattgaagta-gatatgattgt 12811097  T
Q  213 ttatcat 219  Q
    |||||||    
T  12811096 ttatcat 12811090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 113 - 330
Target Start/End: Original strand, 14515502 - 14515717
Alignment:
Q  113 gggaagagaggagagggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgt 212  Q
    |||||| |||| ||||||||  |||||||||||||||| || ||||   |||  |||| | |||||||||||| |||||| |||| |||||||| ||  |    
T  14515502 gggaagggaggggagggtttgtttttcttttttaaattacggactagataat--gtttctctaaaataaattaagtgtgaatgaagtattatattatcat 14515599  T
Q  213 ttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaatcctcccatccctttctctcataaatcctg 312  Q
    |||||||  | ||||||||||| || |||||  || | | | ||| | |||||||| |||||||  |||| |||||| | |||| | ||| |||| |||     
T  14515600 ttatcatgttcatatgttaactcttcaaaaaatattttatagtgttcataatttaaaaatgaaatctaaaccctccctttccttcccctcctaaaccctc 14515699  T
Q  313 catccaaatacaccctaa 330  Q
    |||||||| |||||||||    
T  14515700 catccaaacacaccctaa 14515717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 167 - 243
Target Start/End: Original strand, 13583802 - 13583878
Alignment:
Q  167 gtttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaatatgttaactttttaaaaa 243  Q
    |||||| |||||||||||| ||||||||||| |||||||||||  ||||| ||  ||| ||||||| ||||||||||    
T  13583802 gtttttctaaaataaattaagtgtgattgaaatattatatgatcatttattatgttaacatgttaattttttaaaaa 13583878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 224 - 294
Target Start/End: Original strand, 9298625 - 9298696
Alignment:
Q  224 atatgttaactttttaaaaag-catctcacaatgtccgtaatttaacaatgaaaagtaaatcctcccatccc 294  Q
    ||||||||||||||||||||  ||| ||| |||||||||||||||| | ||||||||||| |||||| ||||    
T  9298625 atatgttaactttttaaaaaaacatttcataatgtccgtaatttaaaattgaaaagtaaaccctcccctccc 9298696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 212 - 289
Target Start/End: Original strand, 33041590 - 33041667
Alignment:
Q  212 tttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaatcctccc 289  Q
    ||||||||  |||||||||||||||||||||| ||| ||| | | |||||||||||| ||| |||| |||||| ||||    
T  33041590 tttatcatgttaatatgttaactttttaaaaaacatttcatagtatccgtaatttaaaaataaaaaataaatcttccc 33041667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 197
Target Start/End: Complemental strand, 6034276 - 6034203
Alignment:
Q  124 agagggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaa 197  Q
    ||||| |||| ||||||||||||||||||  ||| |  || | |||||| |||||||||||| |||||||||||    
T  6034276 agaggatttacttttcttttttaaattgcagactgtataacatgtttttctaaaataaattaagtgtgattgaa 6034203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 173 - 328
Target Start/End: Complemental strand, 665996 - 665841
Alignment:
Q  173 ataaaataaattatgtgtgattgaactattatatgattgtttatcatactaatatgtt-aactttttaaaaagcatctcacaatgtccgtaatttaacaa 271  Q
    |||||| |||||| ||||| ||||| |||||||| ||  ||||||||  ||||||||| || |||||||||  ||| ||| ||| | | |||||||| ||    
T  665996 ataaaaaaaattaagtgtggttgaagtattatatcatcatttatcatgttaatatgttaaaatttttaaaagacatttcataatattcataatttaaaaa 665897  T
Q  272 tgaaaagtaaatcctcccatccctttctctcataaatcctgcatccaaatacaccct 328  Q
    |||||| | || |||||| || ||| | ||| |||| ||| |||||||| |||||||    
T  665896 tgaaaaatgaaccctcccctcacttcccctcctaaaccct-catccaaacacaccct 665841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 84; Significance: 1e-39; HSPs: 2)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 104 - 289
Target Start/End: Complemental strand, 39415 - 39226
Alignment:
Q  104 ggtttagaagggaa-gagaggagagggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaac---t 199  Q
    |||||||||||||| | |||| ||||||||| |||||||||||||||| || |||||| || | |||||| |||||||||||| |||||||||||    |    
T  39415 ggtttagaagggaaagggaggggagggtttacttttcttttttaaattacggactatgtaacatgtttttctaaaataaattaagtgtgattgaagaagt 39316  T
Q  200 attatatgattgtttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaatcctccc 289  Q
    ||||||||||  ||||||||  |||||||||||||||||||||| ||| ||| | |||||||||||||| ||||||||||||| ||||||    
T  39315 attatatgatcatttatcatgttaatatgttaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaaccctccc 39226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 256 - 328
Target Start/End: Original strand, 39362 - 39434
Alignment:
Q  256 gtccgtaatttaacaatgaaaagtaaatcctcccatccctttctctcataaatcctgcatccaaatacaccct 328  Q
    ||||||||||||| || |||||||||| |||||| |||||||| ||  |||| |||  ||||||| |||||||    
T  39362 gtccgtaatttaaaaaagaaaagtaaaccctcccctccctttcccttctaaaccctcaatccaaacacaccct 39434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 82; Significance: 2e-38; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 115 - 320
Target Start/End: Complemental strand, 11575619 - 11575415
Alignment:
Q  115 gaagagaggagagggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgttt 214  Q
    |||| |||| ||||||||| ||||| |||||||||| | || |||  || | |||||| |||||||||||| |||||||| || ||||||||||| ||||    
T  11575619 gaagggaggggagggtttacttttcatttttaaattacaaattatataacatgtttttctaaaataaattaagtgtgattaaagtattatatgatcgttt 11575520  T
Q  215 atcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaatcctcccatccctttctctcataaatcctgca 314  Q
    |||||  |||||||||||||||||||||| ||| ||| | | ||| |||||||| ||||||||||||| |||||| |||||| ||||| |||||||| ||    
T  11575519 atcatgttaatatgttaactttttaaaaaacatttcatagtatccttaatttaagaatgaaaagtaaaccctccc-tcccttcctctcctaaatcctcca 11575421  T
Q  315 tccaaa 320  Q
    ||||||    
T  11575420 tccaaa 11575415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 125 - 325
Target Start/End: Original strand, 16652990 - 16653190
Alignment:
Q  125 gagggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaa 224  Q
    ||||||||| |||||||||||||||| || |||||  || | ||||||||||||||||| | ||||||||||| ||||||||||| ||||||  |  |||    
T  16652990 gagggtttacttttcttttttaaattacggactatataacatgtttttataaaataaatcaagtgtgattgaagtattatatgatcgtttattttgttaa 16653089  T
Q  225 tatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaatcctcccatccctttctctcataaatcctgcatccaaataca 324  Q
    |||||||||||||| |||| ||| ||| |||||||||||||||| |||||||| |||| |||| | |||||| | ||| |||| | | |||||||| |||    
T  16653090 tatgttaactttttcaaaaacatttcataatgtccgtaatttaaaaatgaaaattaaaccctctcctcccttcccctcttaaaccattcatccaaacaca 16653189  T
Q  325 c 325  Q
    |    
T  16653190 c 16653190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 113 - 320
Target Start/End: Complemental strand, 31543287 - 31543080
Alignment:
Q  113 gggaagagaggagagggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgt 212  Q
    |||||| |||| ||||||||| ||||||||||||||||  | || ||  || | |||||| |||||||||||| ||||||||||| ||||||||||  ||    
T  31543287 gggaagggaggggagggtttacttttcttttttaaattatggaccatataacatgtttttctaaaataaattaagtgtgattgaagtattatatgaccgt 31543188  T
Q  213 ttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaatcctcccatccctttctctcataaatcctg 312  Q
    |||| ||  ||||||||||||||||| |||| ||| ||| | | |||||||||||| ||||||||||||| |||||| |||||| | ||| |||| |||     
T  31543187 ttatgatgttaatatgttaacttttttaaaaacatttcatagtttccgtaatttaaaaatgaaaagtaaaccctcccctcccttcccctcttaaaccctc 31543088  T
Q  313 catccaaa 320  Q
    ||||||||    
T  31543087 catccaaa 31543080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 120 - 330
Target Start/End: Original strand, 11785562 - 11785772
Alignment:
Q  120 gaggagagggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgtttatcat 219  Q
    |||| ||| ||||| ||||||||||||||||  |||||||  || | |||||| ||||||| ||||  || ||||||| ||||||||| |||||||||||    
T  11785562 gaggggagagtttacttttcttttttaaattatgaactatataacatgtttttctaaaatacattaattgcgattgaagtattatatgtttgtttatcat 11785661  T
Q  220 actaatatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaatcctcccatccctttctctcataaatcctgcatccaa 319  Q
      ||||||| ||||||||||||||  || ||| |||||||||||||||| ||||||||  ||| |||||| || ||| | ||| |||| ||| |||||||    
T  11785662 gttaatatgctaactttttaaaaaatatttcataatgtccgtaatttaaaaatgaaaatcaaaccctcccttctcttaccctcctaaaccctccatccaa 11785761  T
Q  320 atacaccctaa 330  Q
    | |||||||||    
T  11785762 acacaccctaa 11785772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 168 - 320
Target Start/End: Original strand, 36308927 - 36309079
Alignment:
Q  168 tttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaattta 267  Q
    ||||||||||||||| || ||||||||||| |||||||||||||||||||||  ||||||||| |||||| ||||   || ||||||||| |||||||||    
T  36308927 tttttataaaataaactaagtgtgattgaagtattatatgattgtttatcatgttaatatgtttacttttaaaaatatatttcacaatgtacgtaattta 36309026  T
Q  268 acaatgaaaagtaaatcctcccatccctttctctcataaatcctgcatccaaa 320  Q
    |  |||||||||||| |||||| |||||| | ||| |||| ||| ||||||||    
T  36309027 aagatgaaaagtaaaccctcccctcccttcccctcctaaaccctccatccaaa 36309079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 113 - 296
Target Start/End: Original strand, 1281172 - 1281355
Alignment:
Q  113 gggaagagaggagagggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgt 212  Q
    |||||| || ||||||||||| |||||||||||||||| || || ||  || | |||||| ||| |||||| | ||||| ||||| |||||||| || ||    
T  1281172 gggaagggatgagagggtttacttttcttttttaaattacggacgatataacatgtttttctaagataaatcaagtgtggttgaagtattatattatcgt 1281271  T
Q  213 ttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaatcctcccatccctt 296  Q
    |||| ||  ||||||||||||||||||||||  || ||| | |||||||||||||| |||||||| ||||||||||| ||||||    
T  1281272 ttattatgttaatatgttaactttttaaaaaatatttcatagtgtccgtaatttaaaaatgaaaactaaatcctcccctccctt 1281355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 110 - 289
Target Start/End: Complemental strand, 1027066 - 1026888
Alignment:
Q  110 gaagggaagagaggagagggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgat 209  Q
    ||||||||| ||||  |||||| | |||||||||||||||| || |||||  || | |||||| |||||||||||| || |||||||| |||||||||||    
T  1027066 gaagggaagggagggaagggttcacttttcttttttaaattacggactatataa-atgtttttctaaaataaattaagtatgattgaagtattatatgat 1026968  T
Q  210 tgtttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaatcctccc 289  Q
     |||||||||  |||||||||||||||| | |||  || ||| | |||||| ||||||| ||||||||||||| ||||||    
T  1026967 cgtttatcatgttaatatgttaacttttgataaaatatttcatagtgtccgcaatttaaaaatgaaaagtaaaccctccc 1026888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 129 - 277
Target Start/End: Complemental strand, 9718678 - 9718530
Alignment:
Q  129 gtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaatatg 228  Q
    ||||| ||||||||||||||||  |||||||  || |  ||||| ||||||  ||||  |||||||||| |||||||||||||||||||||  |||||||    
T  9718678 gtttacttttcttttttaaattatgaactatataacatatttttctaaaattcattaattgtgattgaagtattatatgattgtttatcatgttaatatg 9718579  T
Q  229 ttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaa 277  Q
     |||||||||||||| ||| ||| | |||||||||||||| ||||||||    
T  9718578 ctaactttttaaaaaccatttcatagtgtccgtaatttaaaaatgaaaa 9718530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 104 - 282
Target Start/End: Original strand, 7979159 - 7979338
Alignment:
Q  104 ggtttagaag-ggaagagaggagagggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactatt 202  Q
    |||||||||| ||||| |||  ||| ||||| |||||||||||||||| || |||||  || | |||||| |||||||||| | |||  |||||| ||||    
T  7979159 ggtttagaagaggaagggagaggagagtttacttttcttttttaaattacggactatataacatgtttttctaaaataaatcaagtgcaattgaagtatt 7979258  T
Q  203 atatgattgtttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaa 282  Q
    |||||||| ||||||||  ||||| |||||  |||||| || ||| ||||  |||||||||||||| |||||||||||||    
T  7979259 atatgattatttatcatgttaataagttaaacttttaataaacatttcacggtgtccgtaatttaaaaatgaaaagtaaa 7979338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 120 - 294
Target Start/End: Complemental strand, 7503162 - 7502988
Alignment:
Q  120 gaggagagggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgtttatcat 219  Q
    |||| ||||||||| ||||| ||||||||||  | | |||  || | |||||| |||||||||||| |||||||| || |||||||||||||||||||||    
T  7503162 gaggggagggtttacttttcgtttttaaattatggattatataacatgtttttctaaaataaattaagtgtgattaaagtattatatgattgtttatcat 7503063  T
Q  220 actaatatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaatcctcccatccc 294  Q
      |||||||||||||||||| ||| ||| ||| | | |  ||||||||| |||| |||| ||| |||||| ||||    
T  7503062 gttaatatgttaactttttataaaacatttcatagttttggtaatttaaaaatggaaagcaaaccctcccctccc 7502988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 127 - 284
Target Start/End: Original strand, 11033460 - 11033618
Alignment:
Q  127 gggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaata 226  Q
    ||||||| |||||||||||||||  || |||||  |  | |||||| ||||||||||||||||||||||||  |||||||||| |||||||||  |||||    
T  11033460 gggtttacttttcttttttaaataacggactatatatcatgtttttctaaaataaattatgtgtgattgaataattatatgatcgtttatcatgttaata 11033559  T
Q  227 tgttaacttttt-aaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaatc 284  Q
    |||||| ||||| ||||| ||| ||| ||| | | |||||||| | |||||||||||||    
T  11033560 tgttaattttttaaaaaaacatttcataatattcataatttaaaattgaaaagtaaatc 11033618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 129 - 243
Target Start/End: Original strand, 37032424 - 37032538
Alignment:
Q  129 gtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaatatg 228  Q
    ||||| |||||||||||||||| |  |||||  || | |||||| |||||||||||| |||||||| || ||||||||||| |||||||||  |||||||    
T  37032424 gtttatttttcttttttaaattacagactatataacatgtttttttaaaataaattaagtgtgattaaagtattatatgatagtttatcatcttaatatg 37032523  T
Q  229 ttaactttttaaaaa 243  Q
    |||||||||||||||    
T  37032524 ttaactttttaaaaa 37032538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 130 - 282
Target Start/End: Original strand, 30664407 - 30664559
Alignment:
Q  130 tttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaatatgt 229  Q
    |||| ||||||||||||||||||  ||| |  || | ||||||  ||||||||||| ||||||||||| |||||||| |  |||||||||| ||||||||    
T  30664407 tttatttttcttttttaaattgcagactttataacatgtttttcaaaaataaattaagtgtgattgaagtattatataaccgtttatcatattaatatgt 30664506  T
Q  230 taactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaa 282  Q
    ||||||||||||||  || |   |||||||||||||||| | |||||| ||||    
T  30664507 taactttttaaaaaatattttgtaatgtccgtaatttaaaactgaaaaataaa 30664559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 129 - 243
Target Start/End: Original strand, 33922565 - 33922679
Alignment:
Q  129 gtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaatatg 228  Q
    ||||| |||||||||||||||| || |||||  || |  ||||| |||||||||||  || |||||||| ||| |||||||||||||||||  |||||||    
T  33922565 gtttacttttcttttttaaattccggactatataacatatttttttaaaataaatttagtatgattgaagtatgatatgattgtttatcatgataatatg 33922664  T
Q  229 ttaactttttaaaaa 243  Q
    |||||||||||||||    
T  33922665 ttaactttttaaaaa 33922679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 114 - 243
Target Start/End: Complemental strand, 40990398 - 40990269
Alignment:
Q  114 ggaagagaggagagggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgtt 213  Q
    ||||| |||||||| ||||  |||||||||||||||| || |||||  || | |||| | |||||||||||| || |||||||| ||||||||||| | |    
T  40990398 ggaagggaggagagagtttgtttttcttttttaaattacggactatataacatgtttctttaaaataaattaagtctgattgaagtattatatgatcgct 40990299  T
Q  214 tatcatactaatatgttaactttttaaaaa 243  Q
    ||||||  ||||||||||||| ||||||||    
T  40990298 tatcatgttaatatgttaactctttaaaaa 40990269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 167 - 277
Target Start/End: Original strand, 6315145 - 6315255
Alignment:
Q  167 gtttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaattt 266  Q
    |||||| |||||||||||| ||||||||||| ||||||| ||| ||||||||   ||||||||||| ||||| |||| ||| ||| | |||||||| |||    
T  6315145 gtttttctaaaataaattaagtgtgattgaagtattatacgatcgtttatcaagttaatatgttaatttttttaaaaacatttcatagtgtccgtatttt 6315244  T
Q  267 aacaatgaaaa 277  Q
    || ||||||||    
T  6315245 aaaaatgaaaa 6315255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 125 - 219
Target Start/End: Complemental strand, 41103709 - 41103615
Alignment:
Q  125 gagggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgtttatcat 219  Q
    ||||||||| |||||||||||||||| | | ||||  || | |||||| |||||||||||| ||||||||||| ||||||||||| |||||||||    
T  41103709 gagggtttacttttcttttttaaattacaagctatataacatgtttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcat 41103615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 167 - 320
Target Start/End: Complemental strand, 30479878 - 30479725
Alignment:
Q  167 gtttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaattt 266  Q
    |||||| |||||||||| | ||||||||||| |||||||| ||  |||||||   |||||||||||||||||||||  ||| ||| | |||| |||||||    
T  30479878 gtttttctaaaataaatcaagtgtgattgaagtattatattatcatttatcaccttaatatgttaactttttaaaagacatttcatagtgtctgtaattt 30479779  T
Q  267 aacaatgaaaagtaaatcctcccatccctttctctcataaatcctgcatccaaa 320  Q
    || |||||||||| ||  ||||| ||| |  | ||| |||||||| ||||||||    
T  30479778 aaaaatgaaaagtgaactctcccctccatccccctcctaaatcctccatccaaa 30479725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 167 - 243
Target Start/End: Complemental strand, 4247678 - 4247602
Alignment:
Q  167 gtttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaatatgttaactttttaaaaa 243  Q
    |||||| |||||||||||| || ||||| || ||||||||||| ||||||||| ||||||||||||||| |||||||    
T  4247678 gtttttttaaaataaattaagtatgatttaagtattatatgatcgtttatcatgctaatatgttaacttcttaaaaa 4247602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 126 - 282
Target Start/End: Complemental strand, 37923280 - 37923124
Alignment:
Q  126 agggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaat 225  Q
    |||||||||| ||  |||||||||| |  |||||  || | |||||| |||||||||||| ||| |||| || |||||||||||  ||||||||  ||||    
T  37923280 agggtttaatatttatttttaaattacagactatataacatgtttttctaaaataaattaagtgcgattaaaatattatatgatcatttatcatgttaat 37923181  T
Q  226 atgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaa 282  Q
    || |||||| |||||||| ||| ||| | ||| | |||||||| |||||||||||||    
T  37923180 attttaactctttaaaaaacatttcatagtgttcataatttaaaaatgaaaagtaaa 37923124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 113 - 268
Target Start/End: Original strand, 28083771 - 28083926
Alignment:
Q  113 gggaagagaggagagggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgt 212  Q
    |||||| ||||||||  |||  |||||||||||||||| |  || ||  || | |||| | |||||||||||| ||||||||| | ||||||||||||||    
T  28083771 gggaagggaggagagattttgtttttcttttttaaattacagacaatataacatgtttctctaaaataaattaagtgtgattggagtattatatgattgt 28083870  T
Q  213 ttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaatttaa 268  Q
    |||||||  | | ||||||||| |||||||| ||| ||| | | ||||||||||||    
T  28083871 ttatcatgttgacatgttaactctttaaaaaacatatcatagtatccgtaatttaa 28083926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 113 - 303
Target Start/End: Original strand, 2248481 - 2248671
Alignment:
Q  113 gggaagagaggagagggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgt 212  Q
    |||||| |||| ||| ||| ||||| |||||||||||| ||   |||  || | |||||| |||||||||| | ||||||||| | ||||||||||  ||    
T  2248481 gggaagggaggggagagttcaatttccttttttaaattacggtttatataacatgtttttctaaaataaatcaagtgtgattggaatattatatgaccgt 2248580  T
Q  213 ttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaatcctcccatccctttctctca 303  Q
    |||  ||  ||||| |||||||||| |||||  || ||| | |||||||||||||| ||| |||||| || |||||| |||||| ||||||    
T  2248581 ttacgatgttaataagttaacttttaaaaaaatatttcatagtgtccgtaatttaaaaataaaaagtgaaccctcccctcccttcctctca 2248671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 129 - 219
Target Start/End: Complemental strand, 42650535 - 42650445
Alignment:
Q  129 gtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgtttatcat 219  Q
    ||||| ||||| |||||||||| || | |||  || | |||||| |||||||||||| ||||||||||| |||||||||||||||||||||    
T  42650535 gtttacttttcgtttttaaattacggaatatataacatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcat 42650445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 177 - 330
Target Start/End: Original strand, 31738516 - 31738669
Alignment:
Q  177 aataaattatgtgtgattgaactattatatgattgtttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaa 276  Q
    ||||||||| |||| |||||| |||||||||||  ||||||||  ||||||||||||| || |||||  || | | | |||||||||||||| |||||||    
T  31738516 aataaattaagtgtaattgaagtattatatgatcatttatcatgttaatatgttaactcttcaaaaaatattttatagtgtccgtaatttaaaaatgaaa 31738615  T
Q  277 agtaaatcctcccatccctttctctcataaatcctgcatccaaatacaccctaa 330  Q
      |||| |||||| |  ||| | ||| |||| ||| |||||||| |||||||||    
T  31738616 tttaaaccctcccctttcttcccctcctaaaccctccatccaaacacaccctaa 31738669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 175 - 330
Target Start/End: Original strand, 43732778 - 43732933
Alignment:
Q  175 aaaataaattatgtgtgattgaactattatatgattgtttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatga 274  Q
    ||||||||||| ||||  ||||| |||||||||||  ||||||||| |  ||  | || |||  ||||| ||| | | |||||||||||||||| || ||    
T  43732778 aaaataaattaagtgtttttgaagtattatatgatcatttatcatattgttaattcaattttcaaaaaatcattttataatgtccgtaatttaaaaaaga 43732877  T
Q  275 aaagtaaatcctcccatccctttctctcataaatcctgcatccaaatacaccctaa 330  Q
    |||||||| |||||| |||||| | ||| |||| ||| |||||||| |||||||||    
T  43732878 aaagtaaaccctcccctcccttcccctcctaaaccctccatccaaacacaccctaa 43732933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 168 - 282
Target Start/End: Complemental strand, 29358499 - 29358386
Alignment:
Q  168 tttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaattta 267  Q
    ||||| || ||||||||| ||||||||||| ||||||| ||| |||||| ||  ||||||||||| ||||||||||  || | | | |||||||||||||    
T  29358499 tttttctagaataaattaagtgtgattgaagtattataggatcgtttataatgttaatatgttaa-tttttaaaaaatattttatagtgtccgtaattta 29358401  T
Q  268 acaatgaaaagtaaa 282  Q
    | ||| |||||||||    
T  29358400 aaaataaaaagtaaa 29358386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 167 - 283
Target Start/End: Original strand, 13405059 - 13405179
Alignment:
Q  167 gtttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaatatgtta----actttttaaaaagcatctcacaatgtccgta 262  Q
    |||||| ||||||||||||| | | |||||| ||||||||||| |||||||||  ||||| ||||    |||||| |||||  || |   ||||||||||    
T  13405059 gtttttctaaaataaattatatataattgaattattatatgatcgtttatcatgttaatacgttaattcacttttaaaaaaatattttttaatgtccgta 13405158  T
Q  263 atttaacaatgaaaagtaaat 283  Q
    |||||| ||||||||||||||    
T  13405159 atttaaaaatgaaaagtaaat 13405179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 120 - 331
Target Start/End: Complemental strand, 3727063 - 3726860
Alignment:
Q  120 gaggagagggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgtttatcat 219  Q
    |||| ||| ||||| |||||||||||| ||| |  |||||  || | |||||| |||||||||||| |  |||||||| ||||||||||  |||||||||    
T  3727063 gaggtgagagtttacttttcttttttagattacagactatataacatgtttttctaaaataaattaagcatgattgaaatattatatgaccgtttatcat 3726964  T
Q  220 actaatatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaatcctcccatccctttctctcataaatcctgcatccaa 319  Q
            ||||||| |||||||| |||  ||   |||||||||||||| |||||||| |||| | |||  |||||| | ||| |||| ||| |||||||    
T  3726963 --------gttaactatttaaaaaacattccatggtgtccgtaatttaaaaatgaaaaataaaccgtcctttcccttcccctcctaaaccctccatccaa 3726872  T
Q  320 atacaccctaaa 331  Q
    | ||||||||||    
T  3726871 acacaccctaaa 3726860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 187 - 243
Target Start/End: Complemental strand, 29691063 - 29691007
Alignment:
Q  187 gtgtgattgaactattatatgattgtttatcatactaatatgttaactttttaaaaa 243  Q
    ||||||||||| ||| ||||||| |||||||||  ||||||||||||||||| ||||    
T  29691063 gtgtgattgaagtatcatatgatcgtttatcatgttaatatgttaacttttttaaaa 29691007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 168 - 243
Target Start/End: Complemental strand, 35694915 - 35694840
Alignment:
Q  168 tttttataaaataaattatgtgtgattgaactattatatgattgtttatcata-ctaatatgttaactttttaaaaa 243  Q
    ||||| |||||||||| | ||||||||||| ||||||||||| | |||| |||  ||||||||||||||||||||||    
T  35694915 tttttttaaaataaatcaagtgtgattgaagtattatatgatcg-ttattatatttaatatgttaactttttaaaaa 35694840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 201 - 328
Target Start/End: Original strand, 34634260 - 34634387
Alignment:
Q  201 ttatatgattgtttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaatcctcccatccctttctc 300  Q
    |||||| ||||||||  ||  |||||||||||||||||||||   || ||| | |||||||||||||| ||| |||| | || |||| |||||||| | |    
T  34634260 ttatattattgtttacaatgttaatatgttaactttttaaaagatatttcatagtgtccgtaatttaaaaataaaaaatgaaccctcacatcccttcccc 34634359  T
Q  301 tcataaatcctgcatccaaatacaccct 328  Q
    || ||||  || |||||||| |||||||    
T  34634360 tcctaaactctccatccaaacacaccct 34634387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 135 - 296
Target Start/End: Complemental strand, 12022336 - 12022175
Alignment:
Q  135 ttttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaatatgttaact 234  Q
    |||| ||||||||||| || || ||| || | |||||| |||||||||||| ||||  ||||| |||||||||||  ||||||||  |  ||  | || |    
T  12022336 ttttattttttaaattacggacaatgtaaaatgtttttttaaaataaattaagtgtttttgaagtattatatgatcatttatcatgttgttaattcaatt 12022237  T
Q  235 ttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaatcctcccatccctt 296  Q
    || |||||| ||| | | ||||| |||||||||| || |||||||||  |||||| ||||||    
T  12022236 ttctaaaaatcattttataatgttcgtaatttaaaaaagaaaagtaagccctcccctccctt 12022175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 150
Target Start/End: Complemental strand, 16653164 - 16653127
Alignment:
Q  113 gggaagagaggagagggtttaattttcttttttaaatt 150  Q
    |||||| |||||||||||||||||||| ||||||||||    
T  16653164 gggaagggaggagagggtttaattttcatttttaaatt 16653127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 77; Significance: 2e-35; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 113 - 329
Target Start/End: Complemental strand, 2859147 - 2858931
Alignment:
Q  113 gggaagagaggagagggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgt 212  Q
    |||||| |||| ||||||||| |||| ||||||||||| || |||||  || | ||||||  ||||||||||| ||||||||||| ||||||||||||||    
T  2859147 gggaagggaggggagggtttacttttattttttaaattacggactatataacatgtttttcaaaaataaattaagtgtgattgaagtattatatgattgt 2859048  T
Q  213 ttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaatcctcccatccctttctctcataaatcctg 312  Q
    |||| ||   | ||||||||||||||||| | ||| ||| |  ||| ||||||||  ||||||||||||| |||||| |||||||| ||| |||| |||     
T  2859047 ttataatgtaagtatgttaactttttaaataacatttcatagggtctgtaatttagaaatgaaaagtaaaccctcccctccctttccctcctaaaccctc 2858948  T
Q  313 catccaaatacacccta 329  Q
    |||||||| ||||||||    
T  2858947 catccaaacacacccta 2858931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 113 - 296
Target Start/End: Original strand, 41498433 - 41498616
Alignment:
Q  113 gggaagagaggagagggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgt 212  Q
    |||||| |||| ||||||||| ||||| ||||||||||  |||||||  || | | |||| ||  |||| ||| ||||||||||| ||||||||||| ||    
T  41498433 gggaagtgaggggagggtttacttttcgtttttaaattatgaactatttaacatgattttctacgataagttaagtgtgattgaagtattatatgatcgt 41498532  T
Q  213 ttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaatcctcccatccctt 296  Q
    |||||||  |||||||||||||||||| ||| ||| ||| | |||||||||||||| |||||||||||||||||||| ||||||    
T  41498533 ttatcatgttaatatgttaactttttataaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaatcctcccctccctt 41498616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 120 - 282
Target Start/End: Original strand, 8529835 - 8529997
Alignment:
Q  120 gaggagagggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgtttatcat 219  Q
    |||| ||||||||| |||||||||||||||| | ||||||  || | |||||| | |||||||||| ||||||||||| ||||||||||| ||||| |||    
T  8529835 gaggggagggtttacttttcttttttaaattacaaactatataacatgttttttttaaataaattaagtgtgattgaagtattatatgatcgtttaccat 8529934  T
Q  220 actaatatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaa 282  Q
      ||||||||||||||||||||||  || ||| | |||||||||||||| |||||||||||||    
T  8529935 gttaatatgttaactttttaaaaaatatttcatagtgtccgtaatttaaaaatgaaaagtaaa 8529997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 168 - 330
Target Start/End: Complemental strand, 40095093 - 40094931
Alignment:
Q  168 tttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaattta 267  Q
    ||||| |||||||||||| ||||||||||| ||||||||||| |||||||||  |||| ||||||||||||| ||| ||| ||| | |||||||||||||    
T  40095093 tttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcatgttaatttgttaactttttataaaacatttcatagtgtccgtaattta 40094994  T
Q  268 acaatgaaaagtaaatcctcccatccctttctctcataaatcctgcatccaaatacaccctaa 330  Q
    | ||||||||||||| |||||| | |||| | ||| |||| ||| |||||||| |||||||||    
T  40094993 aaaatgaaaagtaaaccctccccttccttcccctcctaaaccctccatccaaacacaccctaa 40094931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 114 - 284
Target Start/End: Original strand, 51597698 - 51597868
Alignment:
Q  114 ggaagagaggagagggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgtt 213  Q
    ||||| |||| ||| ||||| |||||||||||||||  || |||||  || | |||||| |||||||||||| ||||||||||| |||||||||||||||    
T  51597698 ggaagggaggggagagtttacttttcttttttaaatcacggactatataacatgtttttttaaaataaattaagtgtgattgaagtattatatgattgtt 51597797  T
Q  214 tatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaatc 284  Q
    ||||||  |||||||||||||||||||||| ||| ||| | ||| | |||||||| | |||||||||||||    
T  51597798 tatcatcttaatatgttaactttttaaaaaccatttcatagtgttcataatttaaaattgaaaagtaaatc 51597868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 113 - 328
Target Start/End: Original strand, 30010361 - 30010576
Alignment:
Q  113 gggaagagaggagagggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgt 212  Q
    |||||| |||| |||| |||| ||||||| |||||||| || |||||  || | |||||| |||||||||||| ||||| ||||| ||||||||||| ||    
T  30010361 gggaagggaggggaggatttacttttcttgtttaaattacggactatataacatgtttttctaaaataaattaagtgtggttgaagtattatatgatcgt 30010460  T
Q  213 ttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaatcctcccatccctttctctcataaatcctg 312  Q
    |||| ||  ||||||||||||| |||||||| ||| ||  | |||||||||||| | ||||||||||||| |||||| |||||| | ||  |||| |||     
T  30010461 ttataatgttaatatgttaactatttaaaaaacatttcgtagtgtccgtaatttcaaaatgaaaagtaaaccctcccctcccttccccttctaaaccctc 30010560  T
Q  313 catccaaatacaccct 328  Q
    |||||||| |||||||    
T  30010561 catccaaacacaccct 30010576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 113 - 332
Target Start/End: Complemental strand, 38510109 - 38509890
Alignment:
Q  113 gggaagagaggagagggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgt 212  Q
    |||||| |||| ||||||||| |||||||||||||| | || |||||  || | |||||| |||||||||| | ||||||||||| |||||||| || ||    
T  38510109 gggaagggaggggagggtttagttttcttttttaaactacggactatataacatgtttttctaaaataaatcaagtgtgattgaagtattatattatcgt 38510010  T
Q  213 ttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaatcctcccatccctttctctcataaatcctg 312  Q
    ||||| |  ||| ||||||| |||||||||  ||| ||| | |||||||||||||| |||||||||| || |||||  |||||| | ||| |||| |||     
T  38510009 ttatcgtgttaagatgttaattttttaaaagacatttcatagtgtccgtaatttaaaaatgaaaagtgaaccctcctctcccttcccctcctaaaccctc 38509910  T
Q  313 catccaaatacaccctaaag 332  Q
     ||||||| |||||||||||    
T  38509909 tatccaaacacaccctaaag 38509890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 114 - 280
Target Start/End: Complemental strand, 32951532 - 32951366
Alignment:
Q  114 ggaagagaggagagggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgtt 213  Q
    ||||| |||| ||| ||||| ||||| |||||||||| || |||||  || | |||||| |||||||||||| ||||||||||| ||||||| ||| |||    
T  32951532 ggaagggaggggagagtttacttttcgtttttaaattacggactatagaacatgtttttctaaaataaattaagtgtgattgaagtattatacgatcgtt 32951433  T
Q  214 tatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagta 280  Q
    ||||||  |||||||||||||||||| ||| ||| |||   |||||||||||||| |||||||||||    
T  32951432 tatcatgttaatatgttaactttttataaaacatttcattgtgtccgtaatttaaaaatgaaaagta 32951366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 113 - 289
Target Start/End: Complemental strand, 35349677 - 35349503
Alignment:
Q  113 gggaagagaggagagggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgt 212  Q
    |||||| |||| ||||||||| ||||| |||||||||| || |||||  || |  ||||| ||||||||| || | || |||||| ||||||||||||||    
T  35349677 gggaagggaggggagggtttacttttcgtttttaaattacggactatataacatttttttctaaaataaactaagggttattgaagtattatatgattgt 35349578  T
Q  213 ttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaatcctccc 289  Q
    |||||||  |||||||||||||||||| ||| ||| |  || |||||||||||||| ||||||||||||| ||||||    
T  35349577 ttatcatgttaatatgttaactttttataaaacattt--cagtgtccgtaatttaaaaatgaaaagtaaaccctccc 35349503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 120 - 288
Target Start/End: Complemental strand, 50744489 - 50744320
Alignment:
Q  120 gaggagagggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgtttatcat 219  Q
    |||| ||||||||  |||||||||||||||| || |||||  || | |||| | |||||||||||| ||||||||||| ||||||||||| |||||||||    
T  50744489 gaggggagggtttgtttttcttttttaaattacggactatataacaggtttctctaaaataaattaagtgtgattgaagtattatatgatcgtttatcat 50744390  T
Q  220 actaatatgttaact-ttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaatcctcc 288  Q
      ||||||||||||| ||| ||||| ||| ||| | |||||||||||||| |||||||  ||||||||||    
T  50744389 gttaatatgttaactctttaaaaaaacatttcatagtgtccgtaatttaaaaatgaaatctaaatcctcc 50744320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 113 - 332
Target Start/End: Original strand, 12234039 - 12234258
Alignment:
Q  113 gggaagagaggagagggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgt 212  Q
    |||||| ||||  |||| |||||||||||||||||||| || |||||  || | |||||| |||||||||| | ||||||||||  ||| |||||||  |    
T  12234039 gggaagggagggtagggcttaattttcttttttaaattacggactatataacatgtttttctaaaataaatcaagtgtgattgatgtataatatgatcat 12234138  T
Q  213 ttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaatcctcccatccctttctctcataaatcctg 312  Q
     ||| ||  ||||||| ||||||| |||||| ||| ||  | |||||||||||||| |||||||| |||| |||||| |||||| | ||| |||| |||     
T  12234139 atattatgttaatatgctaactttataaaaaacatttcgtagtgtccgtaatttaaaaatgaaaactaaaccctcccctcccttcccctcctaaaccctc 12234238  T
Q  313 catccaaatacaccctaaag 332  Q
    |||||||| ||||| |||||    
T  12234239 catccaaacacaccataaag 12234258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 120 - 243
Target Start/End: Original strand, 10391908 - 10392031
Alignment:
Q  120 gaggagagggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgtttatcat 219  Q
    |||| ||||||||| ||||| |||||||||| || |||||   | | |||||| ||||||||||||  ||||||| || ||||||||||  |||||||||    
T  10391908 gaggggagggtttacttttcatttttaaattacggactatattacatgtttttctaaaataaattaattgtgattaaagtattatatgaccgtttatcat 10392007  T
Q  220 actaatatgttaactttttaaaaa 243  Q
      ||||||||||||||||||||||    
T  10392008 gttaatatgttaactttttaaaaa 10392031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 187 - 289
Target Start/End: Original strand, 7444598 - 7444700
Alignment:
Q  187 gtgtgattgaactattatatgattgtttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaatcct 286  Q
    ||||||||||| ||||||||||| |||||| ||  |||||||||||||||||||||| ||| | | | |||||||||||| | |||||||| |||| |||    
T  7444598 gtgtgattgaagtattatatgatcgtttattatgttaatatgttaactttttaaaaatcattttatagtgtccgtaattttaaaatgaaaactaaaccct 7444697  T
Q  287 ccc 289  Q
    |||    
T  7444698 ccc 7444700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 167 - 243
Target Start/End: Complemental strand, 36285735 - 36285659
Alignment:
Q  167 gtttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaatatgttaactttttaaaaa 243  Q
    |||||| ||||||| || | ||||||||||| ||||||||||| |||||||||  ||||||||||||||||||||||    
T  36285735 gtttttttaaaatatatcaagtgtgattgaagtattatatgatcgtttatcatgttaatatgttaactttttaaaaa 36285659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 167 - 287
Target Start/End: Complemental strand, 49946749 - 49946629
Alignment:
Q  167 gtttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaattt 266  Q
    |||||| ||||||||||||  |||||||||| |||||||||||  ||||||||  |||||||||||||||| |||||  || | | | ||||||||||||    
T  49946749 gtttttttaaaataaattaaatgtgattgaagtattatatgataatttatcatgttaatatgttaacttttaaaaaaatattttatagtgtccgtaattt 49946650  T
Q  267 aacaatgaaaagtaaatcctc 287  Q
    || ||||| || |||| ||||    
T  49946649 aaaaatgacaaataaaccctc 49946629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 168 - 289
Target Start/End: Original strand, 41676363 - 41676486
Alignment:
Q  168 tttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaatatgttaactt--tttaaaaagcatctcacaatgtccgtaatt 265  Q
    ||||| |||||||||||| ||||||||| | ||||||||||| |||||||||  ||||||||||| ||     ||||| ||| | | | |||||||||||    
T  41676363 tttttctaaaataaattaagtgtgattgtagtattatatgatcgtttatcatgttaatatgttaatttaaaaaaaaaaacattttatagtgtccgtaatt 41676462  T
Q  266 taacaatgaaaagtaaatcctccc 289  Q
    ||| ||||||||||||| ||||||    
T  41676463 taaaaatgaaaagtaaaccctccc 41676486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 175 - 243
Target Start/End: Original strand, 42230629 - 42230697
Alignment:
Q  175 aaaataaattatgtgtgattgaactattatatgattgtttatcatactaatatgttaactttttaaaaa 243  Q
    ||||||||||| ||||||||||| |||||||||||||||||| ||  |||||| |||||||| ||||||    
T  42230629 aaaataaattaagtgtgattgaagtattatatgattgtttattatgttaatattttaactttataaaaa 42230697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 167 - 243
Target Start/End: Complemental strand, 45585846 - 45585770
Alignment:
Q  167 gtttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaatatgttaactttttaaaaa 243  Q
    |||||| |||||||||||| ||||||| ||| || |||||||| |||||||||  |||||||||||||||| |||||    
T  45585846 gtttttttaaaataaattaagtgtgatcgaagtactatatgatcgtttatcatgttaatatgttaacttttaaaaaa 45585770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 190 - 330
Target Start/End: Complemental strand, 20576269 - 20576131
Alignment:
Q  190 tgattgaactattatatgattgtttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaatcctccc 289  Q
    |||||||| ||||||||||| |||||||||  |||||| |||||| |||||||| ||| |  || |||||||||||||| |||||||  ||||  |||||    
T  20576269 tgattgaagtattatatgatcgtttatcatgttaatatattaactctttaaaaaacattt--cagtgtccgtaatttaaaaatgaaatctaaactctccc 20576172  T
Q  290 atccctttctctcataaatcctgcatccaaatacaccctaa 330  Q
     |||||| | ||| |||| |||  ||||||| |||| ||||    
T  20576171 ctcccttcccctcctaaaccctctatccaaacacactctaa 20576131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 167 - 219
Target Start/End: Complemental strand, 44211066 - 44211014
Alignment:
Q  167 gtttttataaaataaattatgtgtgattgaactattatatgattgtttatcat 219  Q
    |||||| |||||||||||| ||||||||||| ||||||||||| |||||||||    
T  44211066 gtttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcat 44211014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 256 - 331
Target Start/End: Original strand, 35349634 - 35349709
Alignment:
Q  256 gtccgtaatttaacaatgaaaagtaaatcctcccatccctttctctcataaatcctgcatccaaatacaccctaaa 331  Q
    ||||||||||||| || |||||||||| |||||| |||||| | |||||||| |||  ||||||| ||||||||||    
T  35349634 gtccgtaatttaaaaacgaaaagtaaaccctcccctcccttcccctcataaacccttaatccaaacacaccctaaa 35349709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 135 - 328
Target Start/End: Complemental strand, 1085683 - 1085489
Alignment:
Q  135 ttttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaatatgttaact 234  Q
    |||| ||||||||||| ||||| ||| || | |||||| |||||||||||| ||||  ||||| |||||||||||  |||||||| ||  ||  | || |    
T  1085683 ttttattttttaaattacgaaccatgtaaaatgtttttttaaaataaattaagtgtttttgaagtattatatgatcatttatcatgctgttagttcaatt 1085584  T
Q  235 ttttaaaaagcatctcacaatgtccgtaattt-aacaatgaaaagtaaatcctcccatccctttctctcataaatcctgcatccaaatacaccct 328  Q
    || |||||| ||| |   |||||||||||||| || || ||||||||| ||||||| ||| |  | ||| |||| ||| |||||||| |||||||    
T  1085583 ttctaaaaatcattttctaatgtccgtaatttaaaaaaggaaaagtaagtcctcccctccatccccctcctaaaccctccatccaaacacaccct 1085489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 125 - 243
Target Start/End: Original strand, 6563619 - 6563735
Alignment:
Q  125 gagggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaa 224  Q
    ||||||||| |||||||||||||||  |  |||||  || | || ||| ||||||||||||||||| |||||| |||||||||| | ||||||||  |||    
T  6563619 gagggttta-ttttcttttttaaatgacagactatataacatgtctttctaaaataaattatgtgtcattgaattattatatga-tctttatcatgttaa 6563716  T
Q  225 tatgttaactttttaaaaa 243  Q
    ||| ||||||| |||||||    
T  6563717 tatattaacttcttaaaaa 6563735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 167 - 292
Target Start/End: Complemental strand, 26941004 - 26940879
Alignment:
Q  167 gtttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaattt 266  Q
    |||||| |||||||||| | ||||||||||| |||||||||| ||||||  ||  ||||| |||||||||| || ||  || ||| | ||||  ||||||    
T  26941004 gtttttctaaaataaatcaagtgtgattgaagtattatatgactgtttacgatgttaataagttaacttttaaacaaatatttcatagtgtctataattt 26940905  T
Q  267 aacaatgaaaagtaaatcctcccatc 292  Q
    || ||| |||||| || |||||||||    
T  26940904 aaaaataaaaagtgaaccctcccatc 26940879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 256 - 330
Target Start/End: Complemental strand, 30010404 - 30010330
Alignment:
Q  256 gtccgtaatttaacaatgaaaagtaaatcctcccatccctttctctcataaatcctgcatccaaatacaccctaa 330  Q
    |||||||||||||  | ||||||||||||||||| |||||| | ||| |||| |||  ||||||| |||||||||    
T  30010404 gtccgtaatttaaacaagaaaagtaaatcctcccctcccttcccctcctaaaccctcaatccaaacacaccctaa 30010330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 211 - 293
Target Start/End: Complemental strand, 43552109 - 43552031
Alignment:
Q  211 gtttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaatcctcccatcc 293  Q
    |||||||||  |||||||||||||||||||||| ||| ||| ||    |||||||||| |||||||| |||| |||| |||||    
T  43552109 gtttatcatgttaatatgttaactttttaaaaaacatttcataa----cgtaatttaaaaatgaaaaataaaccctcacatcc 43552031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 76; Significance: 7e-35; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 104 - 282
Target Start/End: Original strand, 15969 - 16148
Alignment:
Q  104 ggtttagaagggaa-gagaggagagggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactatt 202  Q
    ||||||| |||||| |||| ||||| ||||| |||||||||||||||| |  |||||  || | |||||| ||||| |||||||||||||||||| ||||    
T  15969 ggtttaggagggaacgagatgagagagtttacttttcttttttaaattacagactatataacatgtttttttaaaaaaaattatgtgtgattgaagtatt 16068  T
Q  203 atatgattgtttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaa 282  Q
     ||| ||||||| ||||| |||||||||||||||||||||| ||| ||| ||| |||||||||||| |||||||| ||||    
T  16069 ttataattgtttttcatattaatatgttaactttttaaaaaacatttcataatatccgtaatttaaaaatgaaaaataaa 16148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 73; Significance: 5e-33; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 120 - 328
Target Start/End: Original strand, 23748131 - 23748339
Alignment:
Q  120 gaggagagggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgtttatcat 219  Q
    |||| ||||||||| |||||||||||||| | || |||||  || | ||||||  ||||||||| | ||||||||||| |||||||| || |||||||||    
T  23748131 gaggggagggtttagttttcttttttaaactacggactatataacatgtttttcaaaaataaatcaagtgtgattgaagtattatattatcgtttatcat 23748230  T
Q  220 actaatatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaatcctcccatccctttctctcataaatcctgcatccaa 319  Q
      |||||||||||||||||||||  ||| ||| | |||||||| ||||| |||||||||| || |||||| |||||| | ||| |||| ||| |||||||    
T  23748231 gttaatatgttaactttttaaaagacatttcatagtgtccgtagtttaaaaatgaaaagtgaaccctcccctcccttcccctcctaaaccctccatccaa 23748330  T
Q  320 atacaccct 328  Q
    | |||||||    
T  23748331 acacaccct 23748339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 113 - 282
Target Start/End: Complemental strand, 15224909 - 15224740
Alignment:
Q  113 gggaagagaggagagggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgt 212  Q
    |||||| |||| || |||||| |||||||||||||||| ||  ||||  || | |||||| || ||||||||| ||||||||||| |||||||||||  |    
T  15224909 gggaagggaggggatggtttacttttcttttttaaattacgggctatataacatgtttttctagaataaattaagtgtgattgaagtattatatgatcat 15224810  T
Q  213 ttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaa 282  Q
    |||||||  |||||||||| ||||||||||| ||| ||| | |||||||||||||| |||||||||||||    
T  15224809 ttatcatgttaatatgttagctttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaa 15224740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 129 - 328
Target Start/End: Complemental strand, 36347740 - 36347541
Alignment:
Q  129 gtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaatatg 228  Q
    ||||| |||||||||||||||| || |||||  || | |||||| |||||||||||| ||||||||||| |||||||| ||||||||||||  |||||||    
T  36347740 gtttacttttcttttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattatataattgtttatcatgttaatatg 36347641  T
Q  229 ttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaatcctcccatccctttctctcataaatcctgcatccaaatacaccct 328  Q
    |||||| ||||||||  || ||| | | |||||||| ||| |||||||||| ||  ||| | |||||| | ||| |||| ||| |||||||| |||||||    
T  36347640 ttaactatttaaaaaatatgtcatagtatccgtaatataaaaatgaaaagtgaactctctcttcccttcccctcctaaacccttcatccaaacacaccct 36347541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 167 - 289
Target Start/End: Complemental strand, 39732890 - 39732768
Alignment:
Q  167 gtttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaattt 266  Q
    |||||| |||||||||||| || |||||||| ||||||||||| |||||||||  |||||||||||||||||| ||| ||| ||| ||||| ||||||||    
T  39732890 gtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaattt 39732791  T
Q  267 aacaatgaaaagtaaatcctccc 289  Q
    || ||||||||||||| ||||||    
T  39732790 aaaaatgaaaagtaaaccctccc 39732768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 87 - 277
Target Start/End: Original strand, 9426988 - 9427179
Alignment:
Q  87 gtgtgtttgaatcgaaaggtttagaagggaagagaggagagggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattat 186  Q
    ||||||||| || ||||| ||  || |||||| ||||||||||||| ||||||||||||||||| | ||||||  || | ||||||  ||| ||||||||    
T  9426988 gtgtgtttggattgaaagtttaggaggggaagggaggagagggtttgattttcttttttaaattaccaactatataacatgtttttcaaaactaaattat 9427087  T
Q  187 gtgtgattgaactattatatgattgtttatcatactaatatgttaacttt-ttaaaaagcatctcacaatgtccgtaatttaacaatgaaaa 277  Q
    | ||||||||| ||||||||| ||||||||||| |||||||| |||||||   ||||| ||| | | | |||||||||||||| ||||||||    
T  9427088 gcgtgattgaagtattatatgtttgtttatcatgctaatatgctaactttaaaaaaaaacattttatagtgtccgtaatttaaaaatgaaaa 9427179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 167 - 282
Target Start/End: Original strand, 16565860 - 16565975
Alignment:
Q  167 gtttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaattt 266  Q
    |||||| |||||||||||| ||||||||||| ||||||||||| |||||||||| | |||||||||||||||||||| | | ||| | | ||||||||||    
T  16565860 gtttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcatatttatatgttaactttttaaaaaacgtttcatagtatccgtaattt 16565959  T
Q  267 aacaatgaaaagtaaa 282  Q
    || ||| |||||||||    
T  16565960 aaaaataaaaagtaaa 16565975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 167 - 296
Target Start/End: Complemental strand, 36567012 - 36566882
Alignment:
Q  167 gtttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaatatgttaacttttta-aaaagcatctcacaatgtccgtaatt 265  Q
    |||||| || |||||||||  |||||||||| |||||||||||  ||||||||  |||||||||||||||||| ||||   | ||| |||||||||||||    
T  36567012 gtttttctataataaattaattgtgattgaagtattatatgatcatttatcatgttaatatgttaactttttataaaaaactttcataatgtccgtaatt 36566913  T
Q  266 taacaatgaaaagtaaatcctcccatccctt 296  Q
    ||| |||||||||||||||||| ||||||||    
T  36566912 taaaaatgaaaagtaaatcctctcatccctt 36566882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 135 - 296
Target Start/End: Original strand, 40022421 - 40022585
Alignment:
Q  135 ttttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgtttatcata--ctaatatgttaa 232  Q
    |||| |||||||||||  |||||||  || | |||||| |||||||||||| ||||||||||| ||||||||||||||||| ||||   ||||||||| |    
T  40022421 tttttttttttaaattatgaactatataacatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgttta 40022520  T
Q  233 cttttt-aaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaatcctcccatccctt 296  Q
    |||||| ||||| ||| ||| | |||| ||||||||| ||||||| ||||| |||||| ||||||    
T  40022521 ctttttaaaaaaacatttcatagtgtctgtaatttaaaaatgaaatgtaaaccctcccctccctt 40022585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 169 - 266
Target Start/End: Original strand, 17379897 - 17379994
Alignment:
Q  169 ttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaattt 266  Q
    |||| |||||||||||| ||||||||| | |||||||||||||||||||||  ||||||| |||||||||||||| ||| ||| | ||||||||||||    
T  17379897 ttttctaaaataaattaagtgtgattggagtattatatgattgtttatcatgttaatatgctaactttttaaaaaacatttcatagtgtccgtaattt 17379994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 120 - 288
Target Start/End: Complemental strand, 19567029 - 19566860
Alignment:
Q  120 gaggagagggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgtttatcat 219  Q
    |||| |||||||||||||  ||||||||||| || |||||  || | |||||| |||||||||||| ||||||||||| ||||||| ||  |||||||||    
T  19567029 gaggggagggtttaatttcattttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattatacgaccgtttatcat 19566930  T
Q  220 actaatatgttaacttttta-aaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaatcctcc 288  Q
      ||||||| |||||||||| |||| ||| ||| | |||| ||||||||| | ||| ||||||| |||||    
T  19566929 tttaatatgctaactttttaaaaaaacatttcatagtgtctgtaatttaaaactgagaagtaaaccctcc 19566860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 113 - 243
Target Start/End: Original strand, 2241439 - 2241569
Alignment:
Q  113 gggaagagaggagagggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgt 212  Q
    |||||| |||| ||| ||||| |||| | || |||||| || |||||  |||| |||||| |||||||||||| |||| |||||| ||||||||||||||    
T  2241439 gggaagggaggggagagtttacttttttattataaattacggactatataatacgtttttctaaaataaattaagtgtaattgaagtattatatgattgt 2241538  T
Q  213 ttatcatactaatatgttaactttttaaaaa 243  Q
    |||||||  ||||||||||| |||| |||||    
T  2241539 ttatcatgttaatatgttaaattttaaaaaa 2241569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 167 - 325
Target Start/End: Complemental strand, 31795930 - 31795772
Alignment:
Q  167 gtttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaattt 266  Q
    |||||| |||||||||||| ||||||||||| ||||||||||| |||||||||  |  ||| |||  |||| ||||| | | ||| | ||||||||||||    
T  31795930 gtttttttaaaataaattaagtgtgattgaagtattatatgatcgtttatcatgttgttattttattttttaaaaaaacttttcatagtgtccgtaattt 31795831  T
Q  267 aacaatgaaaagtaaatcctcccatccctttctctcataaatcctgcatccaaatacac 325  Q
    || || ||||||||| ||||||| ||||||   |||||||| ||| |||||||| ||||    
T  31795830 aaaaacgaaaagtaagtcctcccctcccttcacctcataaaccctccatccaaacacac 31795772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 180 - 281
Target Start/End: Original strand, 34209560 - 34209661
Alignment:
Q  180 aaattatgtgtgattgaactattatatgattgtttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagt 279  Q
    |||||| ||||||||||| | |||||||||||||||||||  ||||||||||||||||||||||  || ||| | |||  ||||||||| ||||||||||    
T  34209560 aaattaagtgtgattgaagtgttatatgattgtttatcatgttaatatgttaactttttaaaaaatatttcatagtgtttgtaatttaaaaatgaaaagt 34209659  T
Q  280 aa 281  Q
    ||    
T  34209660 aa 34209661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 176 - 328
Target Start/End: Original strand, 9631652 - 9631804
Alignment:
Q  176 aaataaattatgtgtgattgaactattatatgattgtttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaa 275  Q
    |||||||| | |||||| |||| |||||||| || |||||||||  ||||||||||||||||||||   ||| |||   |||||||||||||| || |||    
T  9631652 aaataaatcaagtgtgaatgaagtattatattatcgtttatcatgttaatatgttaactttttaaaggacatttcatggtgtccgtaatttaaaaacgaa 9631751  T
Q  276 aagtaaatcctcccatccctttctctcataaatcctgcatccaaatacaccct 328  Q
    |||| || ||||   |||||||| ||| |||| ||| |||||||| |||||||    
T  9631752 aagttaaccctcttctccctttccctcctaaaccctccatccaaacacaccct 9631804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 168 - 243
Target Start/End: Complemental strand, 37740051 - 37739976
Alignment:
Q  168 tttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaatatgttaactttttaaaaa 243  Q
    ||||| |||||||||||| ||||||||||| ||||||||||| |||||||||  |||||| |||||||||| ||||    
T  37740051 tttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcatgttaatatcttaactttttgaaaa 37739976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 187 - 282
Target Start/End: Complemental strand, 42316905 - 42316810
Alignment:
Q  187 gtgtgattgaactattatatgattgtttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaa 282  Q
    ||||||||||| ||||||||||| |||||||||  ||||| |||||||||||||||| ||| ||| | |||  | ||||||| |||||||||||||    
T  42316905 gtgtgattgaagtattatatgatcgtttatcatgttaatacgttaactttttaaaaaacatttcatagtgtttgcaatttaaaaatgaaaagtaaa 42316810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 167 - 326
Target Start/End: Complemental strand, 8427032 - 8426881
Alignment:
Q  167 gtttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaattt 266  Q
    |||||| |||||||||||| ||| ||||||| |||||||||||  ||||||||        |||||||||||||||| ||| ||| | ||||| ||||||    
T  8427032 gtttttctaaaataaattaagtgcgattgaagtattatatgatcatttatcat--------gttaactttttaaaaaacatttcatagtgtccttaattt 8426941  T
Q  267 aacaatgaaaagtaaatcctcccatccctttctctcataaatcctgcatccaaatacacc 326  Q
    || ||| ||||||||| |||||| |||||| | ||| ||||  || ||| ||||||||||    
T  8426940 aaaaattaaaagtaaaccctcccttcccttcccctcctaaactctccattcaaatacacc 8426881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 135 - 243
Target Start/End: Original strand, 12541816 - 12541925
Alignment:
Q  135 ttttcttttttaaattgcgaactatgcaata-agtttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaatatgttaac 233  Q
    |||||||||||||||| || |||||  || | | ||||| |||||||||||| ||| ||||||| || |||||||| |||||||||  |||| |||||||    
T  12541816 ttttcttttttaaattacggactatataaaatattttttctaaaataaattaagtgcgattgaagtactatatgatcgtttatcatgttaatgtgttaac 12541915  T
Q  234 tttttaaaaa 243  Q
    ||||||||||    
T  12541916 tttttaaaaa 12541925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 128 - 327
Target Start/End: Complemental strand, 36046402 - 36046205
Alignment:
Q  128 ggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaatat 227  Q
    |||||| |||| ||||||||||| || || ||  || | | ||||||||||||||||  | ||||||||| |||||| ||||  |||| |||  ||||||    
T  36046402 ggtttacttttgttttttaaattacggacgatataacatgcttttataaaataaatt--gagtgattgaagtattatgtgatcatttaacatgttaatat 36046305  T
Q  228 gttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaatcctcccatccctttctctcataaatcctgcatccaaatacaccc 327  Q
    |||||||||||||||| ||| |   | |||||||||||||| |||||||| ||||  ||||| ||  || | ||| |||| ||| |||||||| ||||||    
T  36046304 gttaactttttaaaaaacattttctagtgtccgtaatttaaaaatgaaaaataaactctcccctcatttcccctcctaaaccctccatccaaacacaccc 36046205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 169 - 219
Target Start/End: Original strand, 18811413 - 18811463
Alignment:
Q  169 ttttataaaataaattatgtgtgattgaactattatatgattgtttatcat 219  Q
    |||| |||||||||||| ||||||||||| |||||||||||||||||||||    
T  18811413 ttttttaaaataaattaagtgtgattgaaatattatatgattgtttatcat 18811463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 129 - 243
Target Start/End: Complemental strand, 28262642 - 28262528
Alignment:
Q  129 gtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaatatg 228  Q
    ||||| ||||||||||||||||    |||||  || | |||||| ||||||||||||  |||||||||| ||||| ||||| |||||||||  || |||     
T  28262642 gtttacttttcttttttaaattattgactatataacatgtttttctaaaataaattacatgtgattgaaatattacatgatcgtttatcatgttattata 28262543  T
Q  229 ttaactttttaaaaa 243  Q
    |||||||||||||||    
T  28262542 ttaactttttaaaaa 28262528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 167 - 289
Target Start/End: Original strand, 39821752 - 39821874
Alignment:
Q  167 gtttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaattt 266  Q
    |||||| |||||||||||| ||| |||| || ||||||| |||  ||||||||  ||||||||||||| |||||| |  || ||| | ||||||||||||    
T  39821752 gtttttctaaaataaattaagtgcgatttaagtattataagatcatttatcatgttaatatgttaactctttaaatattatttcatagtgtccgtaattt 39821851  T
Q  267 aacaatgaaaagtaaatcctccc 289  Q
    || || ||||| |||| ||||||    
T  39821852 aaaaaagaaaactaaaccctccc 39821874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 887001 - 887053
Alignment:
Q  169 ttttataaaataaattatgtgtgattgaactattatatgattgtttatcatac 221  Q
    |||| |||||||||||||||||||||||| |||||||||||  ||||||||||    
T  887001 ttttttaaaataaattatgtgtgattgaagtattatatgatcatttatcatac 887053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 168 - 289
Target Start/End: Original strand, 12751899 - 12752020
Alignment:
Q  168 tttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaattta 267  Q
    ||||| |||||||| ||| ||||||||||| ||||||||||| |||||| ||| || ||| |||| |||| |||||  || ||| | ||||| ||||||     
T  12751899 tttttctaaaataatttaagtgtgattgaagtattatatgatcgtttattatattattatattaatttttaaaaaaatatttcatagtgtccataatttt 12751998  T
Q  268 acaatgaaaagtaaatcctccc 289  Q
    | || |||||| ||| ||||||    
T  12751999 aaaacgaaaagcaaaccctccc 12752020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 130 - 236
Target Start/End: Complemental strand, 29525931 - 29525823
Alignment:
Q  130 tttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgat--tgtttatcatactaatat 227  Q
    |||| |||||||||||||||  || | |||  |||| |||||| ||||||||||||  |||||||||| |||||||| ||  | ||||||||  ||||||    
T  29525931 tttatttttcttttttaaatcacggaatatataatatgtttttttaaaataaattaaatgtgattgaagtattatataatactttttatcatgttaatat 29525832  T
Q  228 gttaacttt 236  Q
    |||||||||    
T  29525831 gttaacttt 29525823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 125 - 218
Target Start/End: Original strand, 41841723 - 41841816
Alignment:
Q  125 gagggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgtttatca 218  Q
    |||||||| ||||||||||||||||| | ||||||  || |  ||||  |||||||||||| | ||||||| | |||||||||||| |||||||    
T  41841723 gagggtttgattttcttttttaaattaccaactatataacatattttcctaaaataaattaagggtgattggagtattatatgattttttatca 41841816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 229 - 289
Target Start/End: Original strand, 1583222 - 1583282
Alignment:
Q  229 ttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaatcctccc 289  Q
    ||||||||||||||| ||| ||| | |||||||||||||| |||||||||| || ||||||    
T  1583222 ttaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagtgaaccctccc 1583282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 135 - 219
Target Start/End: Complemental strand, 3094546 - 3094462
Alignment:
Q  135 ttttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgtttatcat 219  Q
    |||| ||||||||||| | ||||||| || | |||||| |||||||||||  ||||  ||||| |||||||||||| ||||||||    
T  3094546 ttttattttttaaattacaaactatgtaaaatgtttttctaaaataaatttcgtgtttttgaagtattatatgattatttatcat 3094462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 168 - 289
Target Start/End: Original strand, 7681332 - 7681449
Alignment:
Q  168 tttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaattta 267  Q
    ||||| |||||||||||| ||||||||||| ||||||||||| |||| |     ||  |||||||||||| |||||  || ||| ||| |||| ||||||    
T  7681332 tttttgtaaaataaattaagtgtgattgaagtattatatgatcgtttgt----atatcatgttaacttttaaaaaaatatttcataatatccgcaattta 7681427  T
Q  268 acaatgaaaagtaaatcctccc 289  Q
    | ||| ||||||||| ||||||    
T  7681428 aaaataaaaagtaaaccctccc 7681449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 209
Target Start/End: Original strand, 35736204 - 35736300
Alignment:
Q  113 gggaagagaggagagggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgat 209  Q
    |||||| |||| ||||| |||||||||||||||||||  || ||||   || | |||||| |||||||||| | |||||| |||| |||||||||||    
T  35736204 gggaagggaggggaggggttaattttcttttttaaatcacggactagataacatgtttttctaaaataaatgaagtgtgactgaagtattatatgat 35736300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 168 - 239
Target Start/End: Original strand, 32503243 - 32503314
Alignment:
Q  168 tttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaatatgttaacttttta 239  Q
    ||||| |||||||||||| || ||||| || |||||||||||| ||||||||  | |||| |||||||||||    
T  32503243 tttttctaaaataaattaagtatgattaaaatattatatgattatttatcatctttatatattaacttttta 32503314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 253 - 331
Target Start/End: Original strand, 22356173 - 22356251
Alignment:
Q  253 aatgtccgtaatttaacaatgaaaagtaaatcctcccatccctttctctcataaatcctgcatccaaatacaccctaaa 331  Q
    |||||||||||||||| || ||||| | || |||||| |||||| | ||| ||||||||  ||||||| ||||||||||    
T  22356173 aatgtccgtaatttaaaaaagaaaaatgaaccctcccctcccttcccctcctaaatcctcaatccaaacacaccctaaa 22356251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 167 - 209
Target Start/End: Original strand, 41778856 - 41778898
Alignment:
Q  167 gtttttataaaataaattatgtgtgattgaactattatatgat 209  Q
    |||||| |||||||||||| ||||||||||| |||||||||||    
T  41778856 gtttttttaaaataaattaagtgtgattgaagtattatatgat 41778898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 887210 - 887251
Alignment:
Q  178 ataaattatgtgtgattgaactattatatgattgtttatcat 219  Q
    |||||| ||||||||||||| ||||||||||| |||||||||    
T  887210 ataaatcatgtgtgattgaagtattatatgatcgtttatcat 887251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 240
Target Start/End: Original strand, 27926668 - 27926709
Alignment:
Q  199 tattatatgattgtttatcatactaatatgttaactttttaa 240  Q
    ||||||||||| |||||||||  |||||||||||||||||||    
T  27926668 tattatatgatcgtttatcatgttaatatgttaactttttaa 27926709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 135 - 219
Target Start/End: Original strand, 31061410 - 31061494
Alignment:
Q  135 ttttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgtttatcat 219  Q
    |||| ||||||||||| ||||| ||| || | || ||| |||||||||||| ||||  ||||| |||||||||||  ||||||||    
T  31061410 ttttattttttaaattacgaacaatgtaaaatgtgtttttaaaataaattaagtgtttttgaaatattatatgatcatttatcat 31061494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 113 - 209
Target Start/End: Complemental strand, 42296518 - 42296422
Alignment:
Q  113 gggaagagaggagagggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgat 209  Q
    |||||| |||||||||||| | |||| ||||||||||| ||||| ||| || |  ||||| |||||| ||||| ||||  || || |||||||||||    
T  42296518 gggaagggaggagagggttcacttttattttttaaattacgaacgatgtaaaatatttttttaaaatgaattaagtgtttttaaattattatatgat 42296422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 68; Significance: 4e-30; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 125 - 320
Target Start/End: Complemental strand, 16499 - 16304
Alignment:
Q  125 gagggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaa 224  Q
    ||||||||| ||||| ||||||| |  || |||||  || | |||| | |||||||||||| ||||||||||| |||||||||||||||||||||  |||    
T  16499 gagggtttacttttcgtttttaactcacggactatataacatgtttgtctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaa 16400  T
Q  225 tatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaatcctcccatccctttctctcataaatcctgcatccaaa 320  Q
    ||||||||| ||||| ||| ||| ||| | ||| | |||||||| ||||||||||||| |||||| ||| |||| ||| |||| ||| ||||||||    
T  16399 tatgttaacgttttataaaacatttcatagtgttcataatttaaaaatgaaaagtaaaccctcccctccttttccctcctaaaccctccatccaaa 16304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 167 - 287
Target Start/End: Original strand, 15346 - 15465
Alignment:
Q  167 gtttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaattt 266  Q
    |||||| |||||||||||| ||||| ||||| ||||||||||||||||||||   ||||||||| || ||||||||| ||| ||| | ||||||||||||    
T  15346 gtttttctaaaataaattaagtgtggttgaagtattatatgattgtttatcacgttaatatgttgaccttttaaaaaacat-tcatagtgtccgtaattt 15444  T
Q  267 aacaatgaaaagtaaatcctc 287  Q
    || ||| ||||||| ||||||    
T  15445 aaaaataaaaagtagatcctc 15465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 113 - 282
Target Start/End: Original strand, 1201 - 1370
Alignment:
Q  113 gggaagagaggagagggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactat-tatatgattg 211  Q
    ||||||||||| ||| ||||| |||||||||||||||| || |||||| || | ||| || |||||| || ||||  |||  | | ||| |||||||| |    
T  1201 gggaagagaggggagagtttacttttcttttttaaattacggactatgtaacatgttattctaaaattaagtatgactgaa-gtattatatatatgatcg 1299  T
Q  212 tttatcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaa 282  Q
    ||||||||   ||||||||||||||||||||| ||| ||| | ||| | |||||||| |||||||||||||    
T  1300 tttatcatgacaatatgttaactttttaaaaaacatttcatagtgttcataatttaaaaatgaaaagtaaa 1370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 115 - 281
Target Start/End: Original strand, 6615 - 6780
Alignment:
Q  115 gaagagaggagagggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgttt 214  Q
    |||| |||| ||||||||| |||||||||||||||| |  |||||  ||   ||| || |||||||||||  ||||||||||| ||||||||||| ||||    
T  6615 gaagggaggggagggtttacttttcttttttaaattacagactatataacttgttattctaaaataaatttagtgtgattgaagtattatatgatcgttt 6714  T
Q  215 atcatactaatatgttaactttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaa 281  Q
    || ||  |||||| |||| ||||| ||||  || ||| | ||| |||||||||| || |||||||||    
T  6715 at-atgttaatattttaatttttttaaaaatatttcatagtgtgcgtaatttaaaaacgaaaagtaa 6780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 125 - 243
Target Start/End: Original strand, 18812 - 18928
Alignment:
Q  125 gagggtttaattttcttttttaaattgcgaactatgcaataagtttttataaaataaattatgtgtgattgaactattatatgattgtttatcatactaa 224  Q
    ||||||||| |||||||||||||||  |  |||||  || | || ||| ||||||||||||||||| |||||| |||||||||| | ||||||||  |||    
T  18812 gagggttta-ttttcttttttaaatgacagactatataacatgtctttctaaaataaattatgtgtcattgaattattatatga-tctttatcatgttaa 18909  T
Q  225 tatgttaactttttaaaaa 243  Q
    ||| ||||||| |||||||    
T  18910 tatattaacttcttaaaaa 18928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 234 - 329
Target Start/End: Original strand, 242366 - 242461
Alignment:
Q  234 tttttaaaaagcatctcacaatgtccgtaatttaacaatgaaaagtaaatcctcccatccctttctctcataaatcctgcatccaaatacacccta 329  Q
    |||||||||| ||| | | |||||||||||||||| || |||||||||| |||||| |||||| | || ||||| | | |||||||| ||| ||||    
T  242366 tttttaaaaatcattttataatgtccgtaatttaaaaaagaaaagtaaaccctcccctcccttccccttataaaccatccatccaaacacagccta 242461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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