View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8523_low_13 (Length: 258)

Name: NF8523_low_13
Description: NF8523
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8523_low_13
NF8523_low_13
[»] chr7 (52 HSPs)
chr7 (1-130)||(33691477-33691606)
chr7 (1-104)||(9709610-9709713)
chr7 (1-130)||(13880382-13880511)
chr7 (1-104)||(14426792-14426895)
chr7 (1-80)||(30944157-30944236)
chr7 (1-130)||(30026169-30026298)
chr7 (6-130)||(2500308-2500432)
chr7 (1-104)||(16542814-16542916)
chr7 (1-104)||(16622746-16622848)
chr7 (1-104)||(28622143-28622246)
chr7 (10-103)||(16111660-16111754)
chr7 (11-100)||(15088777-15088866)
chr7 (10-103)||(35952449-35952542)
chr7 (1-89)||(10882965-10883053)
chr7 (1-89)||(11319683-11319771)
chr7 (28-104)||(48236711-48236787)
chr7 (6-89)||(2913413-2913496)
chr7 (6-130)||(13648982-13649106)
chr7 (42-130)||(23279791-23279879)
chr7 (18-130)||(28409329-28409441)
chr7 (1-80)||(30945190-30945269)
chr7 (6-130)||(14193358-14193486)
chr7 (6-104)||(33605970-33606068)
chr7 (10-103)||(12174102-12174195)
chr7 (1-89)||(13137716-13137804)
chr7 (1-89)||(48800433-48800521)
chr7 (6-89)||(13692624-13692707)
chr7 (1-130)||(9069858-9069980)
chr7 (11-130)||(11793195-11793314)
chr7 (11-89)||(16316368-16316446)
chr7 (11-130)||(44467338-44467457)
chr7 (37-104)||(15469781-15469848)
chr7 (11-130)||(4494761-4494880)
chr7 (40-130)||(22577771-22577862)
chr7 (5-104)||(2265308-2265409)
chr7 (1-104)||(7339660-7339763)
chr7 (11-89)||(13303109-13303187)
chr7 (11-89)||(13730502-13730579)
chr7 (12-130)||(12366501-12366619)
chr7 (11-80)||(24788381-24788450)
chr7 (11-54)||(16556576-16556619)
chr7 (11-54)||(16609043-16609086)
chr7 (11-89)||(21695658-21695736)
chr7 (31-89)||(29935170-29935228)
chr7 (11-58)||(8183234-8183282)
chr7 (11-58)||(27871983-27872031)
chr7 (11-130)||(331938-332057)
chr7 (15-57)||(1293258-1293301)
chr7 (11-104)||(5826254-5826349)
chr7 (1-58)||(14425699-14425757)
chr7 (26-80)||(19710800-19710855)
chr7 (11-58)||(32264546-32264594)
[»] chr2 (46 HSPs)
chr2 (1-130)||(22317888-22318017)
chr2 (1-104)||(20151771-20151874)
chr2 (1-130)||(23235283-23235412)
chr2 (1-104)||(28711433-28711537)
chr2 (6-89)||(25829385-25829468)
chr2 (11-130)||(38781666-38781785)
chr2 (5-104)||(28700932-28701032)
chr2 (1-89)||(30667265-30667353)
chr2 (11-130)||(13963705-13963824)
chr2 (1-104)||(31800606-31800710)
chr2 (11-104)||(1586760-1586855)
chr2 (6-89)||(22260686-22260769)
chr2 (1-102)||(6573861-6573962)
chr2 (11-104)||(9015092-9015185)
chr2 (1-130)||(30621463-30621592)
chr2 (1-130)||(30624084-30624213)
chr2 (6-89)||(20568485-20568568)
chr2 (10-60)||(30557053-30557103)
chr2 (15-104)||(45086855-45086945)
chr2 (1-127)||(25036966-25037092)
chr2 (1-127)||(25041073-25041199)
chr2 (11-103)||(31327677-31327770)
chr2 (11-103)||(31334398-31334491)
chr2 (5-104)||(34321624-34321725)
chr2 (10-69)||(6392921-6392980)
chr2 (11-89)||(18376673-18376751)
chr2 (8-89)||(38631237-38631318)
chr2 (5-104)||(22802754-22802854)
chr2 (11-89)||(19540684-19540762)
chr2 (11-89)||(22187855-22187933)
chr2 (11-89)||(24850402-24850480)
chr2 (6-60)||(28140400-28140454)
chr2 (11-60)||(10009533-10009582)
chr2 (11-80)||(24377356-24377425)
chr2 (11-58)||(22776079-22776127)
chr2 (11-58)||(22781457-22781505)
chr2 (11-130)||(31967744-31967865)
chr2 (12-60)||(40782757-40782805)
chr2 (11-58)||(44840709-44840757)
chr2 (11-100)||(3277274-3277365)
chr2 (1-58)||(33074518-33074576)
chr2 (11-60)||(23184112-23184161)
chr2 (11-60)||(23595369-23595418)
chr2 (11-60)||(39037422-39037471)
chr2 (11-59)||(22454757-22454805)
chr2 (11-58)||(40332366-40332414)
[»] chr8 (44 HSPs)
chr8 (1-104)||(21933175-21933278)
chr8 (1-130)||(18120872-18121001)
chr8 (1-104)||(17441597-17441700)
chr8 (1-104)||(30421216-30421319)
chr8 (1-130)||(20382144-20382273)
chr8 (1-104)||(16189273-16189376)
chr8 (1-104)||(23185016-23185119)
chr8 (1-89)||(20255357-20255445)
chr8 (11-130)||(22745754-22745873)
chr8 (1-89)||(19156456-19156544)
chr8 (28-103)||(16207556-16207631)
chr8 (5-104)||(1237946-1238046)
chr8 (6-89)||(16681095-16681176)
chr8 (5-104)||(45538228-45538328)
chr8 (5-103)||(9320864-9320963)
chr8 (10-104)||(24832828-24832923)
chr8 (11-104)||(15335815-15335909)
chr8 (11-104)||(15424880-15424974)
chr8 (11-104)||(15516184-15516278)
chr8 (5-130)||(40845118-40845245)
chr8 (1-89)||(17267745-17267833)
chr8 (1-104)||(17797695-17797800)
chr8 (2-89)||(39693810-39693897)
chr8 (1-130)||(6407991-6408122)
chr8 (7-85)||(17525523-17525601)
chr8 (6-80)||(29693596-29693670)
chr8 (5-104)||(36105504-36105605)
chr8 (11-130)||(14989205-14989325)
chr8 (1-89)||(17914733-17914821)
chr8 (11-103)||(19943520-19943613)
chr8 (11-130)||(18151410-18151530)
chr8 (17-104)||(19927335-19927423)
chr8 (11-104)||(13430406-13430501)
chr8 (31-130)||(602483-602582)
chr8 (11-130)||(24646621-24646740)
chr8 (6-60)||(33083135-33083189)
chr8 (10-104)||(3598102-3598198)
chr8 (6-89)||(17702005-17702088)
chr8 (1-60)||(18680073-18680131)
chr8 (11-130)||(18320939-18321058)
chr8 (8-100)||(2811103-2811194)
chr8 (4-60)||(18719244-18719299)
chr8 (10-58)||(24551588-24551636)
chr8 (11-58)||(45292894-45292942)
[»] chr6 (42 HSPs)
chr6 (1-104)||(32544550-32544653)
chr6 (1-130)||(18435856-18435985)
chr6 (1-130)||(26971948-26972077)
chr6 (1-104)||(21235379-21235482)
chr6 (1-104)||(22802407-22802510)
chr6 (1-104)||(16264930-16265033)
chr6 (1-104)||(15954969-15955073)
chr6 (1-104)||(20730484-20730587)
chr6 (11-129)||(19689008-19689126)
chr6 (1-89)||(9718125-9718213)
chr6 (6-130)||(21625385-21625509)
chr6 (6-104)||(34451448-34451546)
chr6 (1-126)||(13435814-13435939)
chr6 (6-130)||(15531361-15531485)
chr6 (1-103)||(20487666-20487768)
chr6 (1-104)||(29918283-29918388)
chr6 (1-89)||(19086432-19086520)
chr6 (5-104)||(19832764-19832864)
chr6 (11-89)||(13602447-13602525)
chr6 (10-99)||(139136-139225)
chr6 (10-99)||(147157-147246)
chr6 (5-100)||(17381716-17381812)
chr6 (1-89)||(19624244-19624332)
chr6 (1-89)||(24117110-24117198)
chr6 (11-104)||(16877506-16877600)
chr6 (5-130)||(21618521-21618648)
chr6 (1-130)||(33351681-33351812)
chr6 (11-104)||(12349254-12349349)
chr6 (11-104)||(12423514-12423609)
chr6 (11-104)||(22058344-22058439)
chr6 (6-80)||(12715223-12715297)
chr6 (11-80)||(18378545-18378614)
chr6 (6-89)||(15302458-15302541)
chr6 (11-104)||(14100237-14100330)
chr6 (5-104)||(16336440-16336540)
chr6 (13-89)||(15987488-15987564)
chr6 (11-89)||(25597754-25597832)
chr6 (11-86)||(19065805-19065882)
chr6 (15-130)||(20112452-20112567)
chr6 (28-80)||(17608107-17608160)
chr6 (36-89)||(18383955-18384008)
chr6 (11-60)||(23284855-23284904)
[»] chr3 (49 HSPs)
chr3 (1-104)||(18121396-18121499)
chr3 (1-104)||(47207991-47208094)
chr3 (1-130)||(28582388-28582517)
chr3 (1-104)||(2561455-2561564)
chr3 (1-130)||(31303670-31303799)
chr3 (1-104)||(11223828-11223931)
chr3 (6-100)||(47405230-47405324)
chr3 (10-104)||(50300508-50300602)
chr3 (8-104)||(11869374-11869470)
chr3 (1-130)||(52920686-52920815)
chr3 (11-100)||(20627258-20627347)
chr3 (1-104)||(53056502-53056606)
chr3 (11-104)||(40800117-40800210)
chr3 (1-130)||(6091013-6091142)
chr3 (1-89)||(41495255-41495343)
chr3 (6-104)||(14969600-14969698)
chr3 (5-101)||(29855711-29855808)
chr3 (10-130)||(49553237-49553359)
chr3 (131-215)||(25631909-25631993)
chr3 (11-89)||(17238744-17238822)
chr3 (3-89)||(20646438-20646524)
chr3 (10-103)||(33583552-33583645)
chr3 (10-103)||(33598172-33598265)
chr3 (1-89)||(13948617-13948705)
chr3 (1-130)||(14392755-14392884)
chr3 (1-89)||(15903480-15903568)
chr3 (10-104)||(38177464-38177558)
chr3 (11-89)||(49642569-49642647)
chr3 (5-104)||(2785381-2785482)
chr3 (5-104)||(5216272-5216373)
chr3 (5-104)||(14955743-14955843)
chr3 (5-89)||(37467587-37467671)
chr3 (5-104)||(24775273-24775375)
chr3 (11-104)||(12726038-12726131)
chr3 (1-89)||(12962891-12962979)
chr3 (6-50)||(16658475-16658519)
chr3 (11-104)||(40851252-40851347)
chr3 (1-92)||(13824313-13824406)
chr3 (11-80)||(22141034-22141104)
chr3 (11-58)||(2028576-2028624)
chr3 (11-58)||(21606325-21606373)
chr3 (11-104)||(21605417-21605514)
chr3 (11-104)||(21636433-21636530)
chr3 (1-47)||(1727858-1727904)
chr3 (11-89)||(22803891-22803969)
chr3 (35-100)||(46349606-46349672)
chr3 (1-58)||(46796196-46796254)
chr3 (12-104)||(49666171-49666265)
chr3 (3-43)||(18142619-18142659)
[»] chr4 (39 HSPs)
chr4 (1-104)||(13575877-13575980)
chr4 (1-104)||(10073198-10073301)
chr4 (11-130)||(37435228-37435347)
chr4 (1-89)||(3395901-3395989)
chr4 (1-104)||(14604640-14604743)
chr4 (6-130)||(45833676-45833800)
chr4 (1-104)||(54680173-54680276)
chr4 (20-104)||(3497928-3498012)
chr4 (1-130)||(56034834-56034963)
chr4 (1-104)||(29121649-29121753)
chr4 (1-130)||(19884964-19885095)
chr4 (3-130)||(19620799-19620926)
chr4 (11-104)||(3793376-3793469)
chr4 (6-89)||(9141143-9141226)
chr4 (1-104)||(22675283-22675386)
chr4 (5-104)||(55732074-55732173)
chr4 (10-89)||(14904067-14904146)
chr4 (11-130)||(12810901-12811020)
chr4 (11-104)||(16853765-16853858)
chr4 (11-88)||(55380528-55380605)
chr4 (6-89)||(12601381-12601464)
chr4 (5-104)||(6517766-6517868)
chr4 (5-77)||(8105950-8106023)
chr4 (1-89)||(16632714-16632802)
chr4 (5-104)||(17247539-17247639)
chr4 (1-89)||(29680306-29680394)
chr4 (1-130)||(3105157-3105288)
chr4 (12-104)||(25650872-25650966)
chr4 (1-104)||(16940237-16940346)
chr4 (10-104)||(10693137-10693233)
chr4 (10-104)||(10906903-10906999)
chr4 (11-58)||(14571312-14571360)
chr4 (11-58)||(22191126-22191174)
chr4 (6-130)||(14153685-14153811)
chr4 (11-89)||(40846368-40846447)
chr4 (5-104)||(413283-413387)
chr4 (6-80)||(14833673-14833747)
chr4 (13-104)||(39419471-39419564)
chr4 (11-52)||(40860961-40861002)
[»] chr1 (38 HSPs)
chr1 (2-130)||(32785622-32785750)
chr1 (6-130)||(22599851-22599975)
chr1 (6-130)||(36134460-36134584)
chr1 (1-89)||(1900614-1900702)
chr1 (1-130)||(22154155-22154284)
chr1 (1-130)||(22427028-22427157)
chr1 (8-130)||(16234981-16235103)
chr1 (6-104)||(29216069-29216167)
chr1 (5-104)||(2834975-2835075)
chr1 (5-104)||(25448228-25448328)
chr1 (6-89)||(38282869-38282952)
chr1 (11-89)||(1578124-1578202)
chr1 (6-104)||(2268814-2268912)
chr1 (10-103)||(2327104-2327198)
chr1 (1-104)||(2267337-2267440)
chr1 (28-104)||(39200720-39200796)
chr1 (11-89)||(19717796-19717874)
chr1 (3-104)||(22464486-22464588)
chr1 (15-89)||(28492146-28492220)
chr1 (5-130)||(44821212-44821339)
chr1 (11-102)||(10251283-10251376)
chr1 (1-50)||(35040431-35040480)
chr1 (6-104)||(7310090-7310185)
chr1 (12-80)||(20954174-20954242)
chr1 (11-130)||(21703121-21703242)
chr1 (1-60)||(12284720-12284779)
chr1 (11-89)||(10757696-10757773)
chr1 (6-80)||(33256072-33256146)
chr1 (6-80)||(33276244-33276318)
chr1 (1-104)||(21204625-21204730)
chr1 (11-58)||(23025053-23025101)
chr1 (11-104)||(21120764-21120859)
chr1 (11-104)||(21984863-21984958)
chr1 (11-104)||(30572457-30572552)
chr1 (4-89)||(30893346-30893432)
chr1 (11-89)||(48704491-48704569)
chr1 (47-104)||(35402146-35402203)
chr1 (11-58)||(21134907-21134955)
[»] scaffold0251 (1 HSPs)
scaffold0251 (1-130)||(7971-8100)
[»] scaffold0217 (3 HSPs)
scaffold0217 (1-104)||(19316-19419)
scaffold0217 (2-104)||(21841-21945)
scaffold0217 (11-104)||(9853-9948)
[»] scaffold0007 (1 HSPs)
scaffold0007 (1-130)||(143372-143501)
[»] scaffold1359 (2 HSPs)
scaffold1359 (1-104)||(414-517)
scaffold1359 (1-58)||(1552-1610)
[»] chr5 (31 HSPs)
chr5 (1-103)||(33022926-33023028)
chr5 (1-130)||(7745393-7745522)
chr5 (1-104)||(5430146-5430249)
chr5 (1-104)||(31118138-31118241)
chr5 (6-89)||(21910809-21910892)
chr5 (1-80)||(14086333-14086412)
chr5 (6-80)||(26784624-26784698)
chr5 (3-98)||(33933582-33933678)
chr5 (6-89)||(17815250-17815333)
chr5 (5-104)||(15517252-15517353)
chr5 (1-104)||(29138163-29138268)
chr5 (11-130)||(20551149-20551269)
chr5 (5-98)||(26759462-26759556)
chr5 (1-89)||(89224-89312)
chr5 (1-80)||(4887284-4887364)
chr5 (11-130)||(9089199-9089320)
chr5 (11-89)||(6512235-6512313)
chr5 (11-104)||(11994202-11994296)
chr5 (12-89)||(21072028-21072105)
chr5 (3-60)||(41566248-41566305)
chr5 (5-104)||(42243979-42244079)
chr5 (11-104)||(3245194-3245289)
chr5 (11-104)||(30115645-30115740)
chr5 (11-89)||(23412778-23412856)
chr5 (1-104)||(28139849-28139954)
chr5 (5-99)||(30743293-30743388)
chr5 (11-60)||(12352635-12352684)
chr5 (11-58)||(10849054-10849102)
chr5 (11-104)||(25929933-25930027)
chr5 (11-60)||(21198838-21198887)
chr5 (23-59)||(6499520-6499556)
[»] scaffold1331 (1 HSPs)
scaffold1331 (1-104)||(336-439)
[»] scaffold0023 (1 HSPs)
scaffold0023 (6-130)||(103843-103967)
[»] scaffold0003 (1 HSPs)
scaffold0003 (1-104)||(89797-89900)
[»] scaffold0005 (3 HSPs)
scaffold0005 (1-104)||(212635-212738)
scaffold0005 (11-58)||(246016-246064)
scaffold0005 (6-80)||(5952-6026)
[»] scaffold0227 (1 HSPs)
scaffold0227 (11-104)||(22952-23045)
[»] scaffold0171 (1 HSPs)
scaffold0171 (1-130)||(27145-27274)
[»] scaffold0485 (1 HSPs)
scaffold0485 (1-104)||(9103-9205)
[»] scaffold0359 (1 HSPs)
scaffold0359 (1-130)||(5391-5521)
[»] scaffold0116 (1 HSPs)
scaffold0116 (11-104)||(20697-20790)
[»] scaffold0334 (1 HSPs)
scaffold0334 (1-130)||(10075-10204)
[»] scaffold0022 (2 HSPs)
scaffold0022 (1-89)||(39693-39781)
scaffold0022 (1-89)||(137753-137841)
[»] scaffold0012 (1 HSPs)
scaffold0012 (5-104)||(215206-215306)
[»] scaffold0439 (1 HSPs)
scaffold0439 (11-130)||(6408-6528)
[»] scaffold0026 (2 HSPs)
scaffold0026 (6-89)||(8183-8266)
scaffold0026 (6-130)||(60302-60426)
[»] scaffold0861 (1 HSPs)
scaffold0861 (1-90)||(4687-4776)
[»] scaffold0452 (1 HSPs)
scaffold0452 (5-104)||(1593-1693)
[»] scaffold0290 (1 HSPs)
scaffold0290 (1-89)||(18362-18450)
[»] scaffold0043 (1 HSPs)
scaffold0043 (1-104)||(78090-78194)
[»] scaffold0426 (1 HSPs)
scaffold0426 (6-89)||(13898-13981)
[»] scaffold0243 (1 HSPs)
scaffold0243 (11-89)||(4751-4829)
[»] scaffold0146 (1 HSPs)
scaffold0146 (11-89)||(15377-15455)
[»] scaffold0083 (1 HSPs)
scaffold0083 (11-89)||(25733-25811)
[»] scaffold0065 (1 HSPs)
scaffold0065 (1-87)||(1985-2071)
[»] scaffold0479 (1 HSPs)
scaffold0479 (11-104)||(10228-10321)
[»] scaffold0771 (1 HSPs)
scaffold0771 (1-89)||(757-845)
[»] scaffold0337 (1 HSPs)
scaffold0337 (1-89)||(14943-15031)
[»] scaffold0028 (1 HSPs)
scaffold0028 (5-104)||(5311-5411)
[»] scaffold1434 (1 HSPs)
scaffold1434 (6-65)||(552-611)
[»] scaffold0411 (1 HSPs)
scaffold0411 (10-130)||(12501-12621)
[»] scaffold0210 (1 HSPs)
scaffold0210 (9-96)||(1920-2007)
[»] scaffold0084 (2 HSPs)
scaffold0084 (6-89)||(32759-32842)
scaffold0084 (6-90)||(49605-49688)
[»] scaffold0247 (1 HSPs)
scaffold0247 (1-58)||(23350-23408)
[»] scaffold0066 (1 HSPs)
scaffold0066 (11-130)||(60585-60704)
[»] scaffold0471 (1 HSPs)
scaffold0471 (5-104)||(3621-3722)
[»] scaffold0527 (2 HSPs)
scaffold0527 (11-104)||(162-256)
scaffold0527 (11-104)||(8225-8319)
[»] scaffold0161 (1 HSPs)
scaffold0161 (11-130)||(9838-9956)
[»] scaffold0120 (2 HSPs)
scaffold0120 (23-130)||(36476-36583)
scaffold0120 (23-130)||(42422-42529)
[»] scaffold0004 (3 HSPs)
scaffold0004 (11-89)||(377317-377395)
scaffold0004 (11-89)||(30612-30689)
scaffold0004 (11-89)||(220528-220607)
[»] scaffold0607 (1 HSPs)
scaffold0607 (1-104)||(7196-7301)
[»] scaffold0015 (1 HSPs)
scaffold0015 (5-104)||(61090-61191)
[»] scaffold0035 (2 HSPs)
scaffold0035 (11-130)||(19174-19294)
scaffold0035 (15-104)||(98901-98992)
[»] scaffold0275 (1 HSPs)
scaffold0275 (1-74)||(8566-8640)
[»] scaffold0414 (1 HSPs)
scaffold0414 (11-104)||(6862-6958)
[»] scaffold0045 (1 HSPs)
scaffold0045 (11-104)||(87325-87420)
[»] scaffold0261 (1 HSPs)
scaffold0261 (11-89)||(5695-5773)
[»] scaffold0193 (1 HSPs)
scaffold0193 (6-60)||(16066-16120)
[»] scaffold0047 (1 HSPs)
scaffold0047 (6-80)||(30507-30581)
[»] scaffold0395 (1 HSPs)
scaffold0395 (12-89)||(13275-13352)
[»] scaffold0324 (1 HSPs)
scaffold0324 (11-60)||(10229-10278)
[»] scaffold0249 (1 HSPs)
scaffold0249 (11-58)||(17544-17592)
[»] scaffold0011 (1 HSPs)
scaffold0011 (11-58)||(65198-65246)


Alignment Details
Target: chr7 (Bit Score: 89; Significance: 5e-43; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 33691606 - 33691477
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgt 100  Q
    |||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||    
T  33691606 agcactttgtcttcaggagcagttctcttcagacgctttaaacttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgt 33691507  T
Q  101 caaannnnnnnctatggtcctgtacacttg 130  Q
    ||||       |||||||||||||||||||    
T  33691506 caaatttttgtctatggtcctgtacacttg 33691477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 9709713 - 9709610
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgt 100  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||  |||||||||||||||    
T  9709713 agcactttgtcttcaggagcagttttcttcagacgctttaagcttcctttttgttgattcatttgctctctattgttcttccaagacctttttaagatgt 9709614  T
Q  101 caaa 104  Q
    ||||    
T  9709613 caaa 9709610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 13880382 - 13880511
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgt 100  Q
    ||||||||| |||||| |||| |||| ||||||||||||||||||||||||||||||||| ||| |||||| |||||||| |||||||| ||||||||||    
T  13880382 agcactttgacttcagaagcacttctcttcagacgctttaagcttcctttttgttgattcctttgctctcttttgttcttccagaacctatttaagatgt 13880481  T
Q  101 caaannnnnnnctatggtcctgtacacttg 130  Q
    ||||       |||||||||||||||||||    
T  13880482 caaatttatgtctatggtcctgtacacttg 13880511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 14426792 - 14426895
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgt 100  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| ||| |||| |||||||||| ||  |||||||||||||||    
T  14426792 agcactttgtcttcaggagcagttttcttcagacgctttaagcttcctttttgttgattcctttgctctttattgttcttccaagacctttttaagatgt 14426891  T
Q  101 caaa 104  Q
    ||||    
T  14426892 caaa 14426895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 30944236 - 30944157
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctt 80  Q
    |||||||||||||||||||||||| | |||| |||||||||||||||||||||||||||||||| |||| ||||||||||    
T  30944236 agcactttgtcttcaggagcagttttcttcaaacgctttaagcttcctttttgttgattcatttgctctttattgttctt 30944157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 30026169 - 30026298
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgt 100  Q
    ||||||||  |||||| |||| |||| |||||| |||| ||||||||||||||||||||| ||| |||||| |||||||| || ||||| ||||||||||    
T  30026169 agcacttttacttcagaagcacttctcttcagatgcttcaagcttcctttttgttgattcctttgctctcttttgttcttccataacctatttaagatgt 30026268  T
Q  101 caaannnnnnnctatggtcctgtacacttg 130  Q
    ||||       |||||||||||||||||||    
T  30026269 caaatttttgtctatggtcctgtacacttg 30026298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 6 - 130
Target Start/End: Original strand, 2500308 - 2500432
Alignment:
Q  6 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaan 105  Q
    |||||||||||||||| |||| |||||| |||| ||||||||||||||||||||| ||  |||||| |||||||| || ||||| ||||||||||||||     
T  2500308 tttgtcttcaggagcacttctcttcagatgcttcaagcttcctttttgttgattccttagctctcttttgttcttccataacctatttaagatgtcaaat 2500407  T
Q  106 nnnnnnctatggtcctgtacacttg 130  Q
          |||||||| ||||||||||    
T  2500408 ttttgtctatggtcttgtacacttg 2500432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 16542916 - 16542814
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgt 100  Q
    |||||||||||||||| ||||||| | ||||||||||| ||||||||||||||||||||| ||| |||| |||||||||| ||  ||||||||||||||     
T  16542916 agcactttgtcttcagaagcagttttcttcagacgctt-aagcttcctttttgttgattcctttgctctttattgttcttccaacacctttttaagatga 16542818  T
Q  101 caaa 104  Q
    ||||    
T  16542817 caaa 16542814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 16622746 - 16622848
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgt 100  Q
    |||||||||||||||| ||||||| | ||||||||||| ||||||||||||||||||||| ||| |||| |||||||||| ||  ||||||||||||||     
T  16622746 agcactttgtcttcagaagcagttttcttcagacgctt-aagcttcctttttgttgattcctttgctctttattgttcttccaacacctttttaagatga 16622844  T
Q  101 caaa 104  Q
    ||||    
T  16622845 caaa 16622848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 28622246 - 28622143
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgt 100  Q
    ||||||||||||||| |||||||  | |||| |||||||||||||| ||||||||||||| ||| |||| |||||||||| ||  |||||||||||||||    
T  28622246 agcactttgtcttcatgagcagtattcttcatacgctttaagcttcatttttgttgattcctttgctctttattgttcttccaagacctttttaagatgt 28622147  T
Q  101 caaa 104  Q
    ||||    
T  28622146 caaa 28622143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 103
Target Start/End: Complemental strand, 16111754 - 16111660
Alignment:
Q  10 tcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttc-agaacctttttaagatgtcaa 103  Q
    |||||||||||| || | ||||||||||||||||||||||||||||||||| |||||||| |||||||||| | ||| | |||||||||||||||    
T  16111754 tcttcaggagcatttttcttcagacgctttaagcttcctttttgttgattccttttctctttattgttcttccaagaccttttttaagatgtcaa 16111660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 100
Target Start/End: Original strand, 15088777 - 15088866
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgt 100  Q
    ||||||||||| |||| |||||| |||| ||||||||||||||||||||| ||| |||||| |||||||| |||||||| ||||||||||    
T  15088777 cttcaggagcacttctcttcagatgcttcaagcttcctttttgttgattcctttgctctcttttgttcttccagaacctatttaagatgt 15088866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 10 - 103
Target Start/End: Complemental strand, 35952542 - 35952449
Alignment:
Q  10 tcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 103  Q
    |||||| |||||||| | ||||||||||||||||||||||||||||||||| ||| |||| |||||||||| ||   |||||||||||||||||    
T  35952542 tcttcaagagcagttttcttcagacgctttaagcttcctttttgttgattcctttgctctttattgttcttccaaggcctttttaagatgtcaa 35952449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 10883053 - 10882965
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 89  Q
    ||||||||| |||||| |||| |||| ||||||||||||||||||| ||||||||||||| ||| |||||| |||||||| ||||||||    
T  10883053 agcactttgacttcagtagcacttctcttcagacgctttaagcttcatttttgttgattcctttgctctcttttgttcttccagaacct 10882965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 11319683 - 11319771
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 89  Q
    ||||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||   || |||||| |||||||| ||||||||    
T  11319683 agcactttggcttcaggagcacttctcttcagacgctttaagcttcctttttgttgatttcattgctctcttttgttcttccagaacct 11319771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 48236787 - 48236711
Alignment:
Q  28 ttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 104  Q
    ||||||||||||||||||||||||||||||||| ||| |||| |||||||||| ||  |||||||||||||||||||    
T  48236787 ttcagacgctttaagcttcctttttgttgattcctttactctttattgttcttccaagacctttttaagatgtcaaa 48236711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 2913496 - 2913413
Alignment:
Q  6 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 89  Q
    |||||||||||||||| |||| |||| | |||||||||||||||||||||||||| ||| |||||| |||||||| ||||||||    
T  2913496 tttgtcttcaggagcacttctcttcatatgctttaagcttcctttttgttgattcctttgctctcttttgttcttccagaacct 2913413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 6 - 130
Target Start/End: Original strand, 13648982 - 13649106
Alignment:
Q  6 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaan 105  Q
    |||||||||||||||| |||| ||||||||| |||| |||||||||||||||||| ||| |||||| ||||||||  |||||||  | ||||| |||||     
T  13648982 tttgtcttcaggagcacttctcttcagacgccttaaacttcctttttgttgattcctttgctctcttttgttcttctagaacctaataaagatatcaaat 13649081  T
Q  106 nnnnnnctatggtcctgtacacttg 130  Q
          |||||||||||||||||||    
T  13649082 ttttgtctatggtcctgtacacttg 13649106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 42 - 130
Target Start/End: Complemental strand, 23279879 - 23279791
Alignment:
Q  42 gcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnnnctatggtcctgtacacttg 130  Q
    ||||||||||||||||||| ||| ||||||||||||||| ||||||||||||| |||||||||       |||||||||||||||||||    
T  23279879 gcttcctttttgttgattcttttgctctctattgttcttccagaacctttttatgatgtcaaatttttgtctatggtcctgtacacttg 23279791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 18 - 130
Target Start/End: Original strand, 28409329 - 28409441
Alignment:
Q  18 agcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnnnctatgg 117  Q
    |||| |||| ||||||||||| || |||||||||||| ||||||||| |||||| |||||||| |||||||| ||||||||||||||       ||||||    
T  28409329 agcacttctcttcagacgcttcaaacttcctttttgtcgattcatttgctctcttttgttcttacagaacctatttaagatgtcaaatttttgtctatgg 28409428  T
Q  118 tcctgtacacttg 130  Q
    ||| |||||||||    
T  28409429 tccagtacacttg 28409441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 30945269 - 30945190
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctt 80  Q
    |||||||||||||||||||||||| | |||||||| ||||||||||||||||||||| |||||| |||| | ||||||||    
T  30945269 agcactttgtcttcaggagcagttttcttcagacgttttaagcttcctttttgttgactcatttgctcttttttgttctt 30945190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 6 - 130
Target Start/End: Original strand, 14193358 - 14193486
Alignment:
Q  6 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattc----attttctctctattgttctttcagaacctttttaagatgtc 101  Q
    |||||||||||||||  |||| ||||||||||| ||||||| |||||||||||||    |||  |||||| |||||||| ||||||||||||||||||||    
T  14193358 tttgtcttcaggagcgcttctcttcagacgcttcaagcttcatttttgttgattctttaattagctctcttttgttcttccagaacctttttaagatgtc 14193457  T
Q  102 aaannnnnnnctatggtcctgtacacttg 130  Q
    |||       |||||||| ||||||||||    
T  14193458 aaatttttgtctatggtcttgtacacttg 14193486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 6 - 104
Target Start/End: Original strand, 33605970 - 33606068
Alignment:
Q  6 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 104  Q
    ||||||||||||| ||||| | |||||| | ||||||||||||| |||||||||| ||| |||| |||||||||| ||  |||||||||||||||||||    
T  33605970 tttgtcttcaggaacagttttcttcagatgttttaagcttccttattgttgattcctttgctctttattgttcttccaagacctttttaagatgtcaaa 33606068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 103
Target Start/End: Complemental strand, 12174195 - 12174102
Alignment:
Q  10 tcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 103  Q
    |||||||||| |||| | |||||||| |||||||||| ||||||||||||| ||| |||| |||||||||| ||  ||||||||||||||||||    
T  12174195 tcttcaggagtagttttcttcagacgttttaagcttcttttttgttgattcctttgctctttattgttcttccaagacctttttaagatgtcaa 12174102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 13137804 - 13137716
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 89  Q
    ||||||||| ||||||||||| |||| |||||| |||| ||||||||||||||||||||| ||  |||||| |||||||| ||||||||    
T  13137804 agcactttgacttcaggagcacttctcttcagatgcttcaagcttcctttttgttgattccttacctctcttttgttcttccagaacct 13137716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 48800521 - 48800433
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 89  Q
    ||||||||| ||||||||||| |||| |||||| |||| |||||||||||||||||||||  || |||||| |||||||| ||||||||    
T  48800521 agcactttgacttcaggagcacttctcttcagatgcttcaagcttcctttttgttgattccattgctctcttttgttcttccagaacct 48800433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 13692624 - 13692707
Alignment:
Q  6 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 89  Q
    |||||||||||||||| |||| ||||||||| |||||||||||||||  |||||| ||| |||||| |||||||| ||||||||    
T  13692624 tttgtcttcaggagcacttctcttcagacgccttaagcttcctttttcctgattcctttgctctcttttgttcttccagaacct 13692707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 9069858 - 9069980
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgt 100  Q
    ||||||||| |||||||||||||||| || |||||||||||||||       |||||||   || ||||||||||||| | |||||||||||||||||||    
T  9069858 agcactttgacttcaggagcagttctctttagacgctttaagctt-------gttgatttcattgctctctattgttcatccagaacctttttaagatgt 9069950  T
Q  101 caaannnnnnnctatggtcctgtacacttg 130  Q
    ||||       |||||||||||||||||||    
T  9069951 caaatttttgtctatggtcctgtacacttg 9069980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 11 - 130
Target Start/End: Original strand, 11793195 - 11793314
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnn 110  Q
    ||||||||||| ||||||||||| |||| ||||||||||||||||||||| ||  |||||| |||||||| | ||||||  | ||||| |||||          
T  11793195 cttcaggagcacttcttttcagatgcttcaagcttcctttttgttgattccttcgctctcttttgttcttcctgaacctaataaagatatcaaatttttg 11793294  T
Q  111 nctatggtcctgtacacttg 130  Q
     |||||||||||||||||||    
T  11793295 tctatggtcctgtacacttg 11793314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 16316446 - 16316368
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 89  Q
    ||||||||||| |||| || |||||||| ||||||||||||||||||||| ||  |||||| |||||||||||||||||    
T  16316446 cttcaggagcacttctctttagacgcttcaagcttcctttttgttgattccttagctctcttttgttctttcagaacct 16316368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 11 - 130
Target Start/End: Original strand, 44467338 - 44467457
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnn 110  Q
    ||||||||||| |||| |||||| |||| || ||||||||||||||||||  || |||| | |||||||| |||||||| |||| |||||||||          
T  44467338 cttcaggagcacttctcttcagatgcttcaaacttcctttttgttgattccattgctctattttgttcttccagaacctatttatgatgtcaaatttttg 44467437  T
Q  111 nctatggtcctgtacacttg 130  Q
     |||||||||||||||||||    
T  44467438 tctatggtcctgtacacttg 44467457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 37 - 104
Target Start/End: Original strand, 15469781 - 15469848
Alignment:
Q  37 tttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 104  Q
    |||||||||| | ||||||||||| ||| ||||||||||||||| || ||||||||||||||||||||    
T  15469781 tttaagcttcgtatttgttgattcctttgctctctattgttcttccataacctttttaagatgtcaaa 15469848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 130
Target Start/End: Original strand, 4494761 - 4494880
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnn 110  Q
    ||||||||||| |||| || ||| |||| ||||||||||||||||||||   || |||||| | |||||| |||||||| ||||||||||||||          
T  4494761 cttcaggagcacttctctttagatgcttcaagcttcctttttgttgatttcattgctctctttcgttcttccagaacctatttaagatgtcaaatttttg 4494860  T
Q  111 nctatggtcctgtacacttg 130  Q
     |||||||||| ||||||||    
T  4494861 tctatggtcctatacacttg 4494880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 40 - 130
Target Start/End: Complemental strand, 22577862 - 22577771
Alignment:
Q  40 aagcttcctttttgttgattcattttctct-ctattgttctttcagaacctttttaagatgtcaaannnnnnnctatggtcctgtacacttg 130  Q
    ||||||||||||||||||||||||| |||| || |||||||| |||||||| ||||||||||||||       |||||||| ||||||||||    
T  22577862 aagcttcctttttgttgattcatttgctctccttttgttcttccagaacctatttaagatgtcaaatttttttctatggtcatgtacacttg 22577771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 104
Target Start/End: Complemental strand, 2265409 - 2265308
Alignment:
Q  5 ctttgtcttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtca 102  Q
    |||| ||||||||||||||| | |||||||||||||||||| |||||||||||||  |||  |||| || |||||||| ||  |||||||||||||||||    
T  2265409 ctttatcttcaggagcagttttcttcagacgctttaagcttccctttttgttgatgtattagctctttatttgttcttccaagacctttttaagatgtca 2265310  T
Q  103 aa 104  Q
    ||    
T  2265309 aa 2265308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 7339763 - 7339660
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgt 100  Q
    |||||||| |||||| || || || | |||||||||||||||| |||||||| || |||||||| |||| |||||||||| ||  || |||||||||||     
T  7339763 agcactttttcttcatgaacacttttcttcagacgctttaagcatcctttttttttattcatttgctctttattgttcttccaagacatttttaagatga 7339664  T
Q  101 caaa 104  Q
    ||||    
T  7339663 caaa 7339660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 13303109 - 13303187
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 89  Q
    ||||||||||| |||| |||||||||||||| |||| ||||||||||||  ||| |||||| |||||||| || |||||    
T  13303109 cttcaggagcacttctcttcagacgctttaaacttcttttttgttgatttctttgctctcttttgttcttccataacct 13303187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 13730579 - 13730502
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 89  Q
    ||||||||||| |||| ||| ||||| ||||| ||||||||||||||||| ||| |||||| |||||||| ||||||||    
T  13730579 cttcaggagcacttctcttc-gacgccttaagtttcctttttgttgattcctttgctctcttttgttcttccagaacct 13730502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 130
Target Start/End: Complemental strand, 12366619 - 12366501
Alignment:
Q  12 ttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnnn 111  Q
    |||||||||| |||| || ||| |||| |||||||||||||||||||||  || |||||| || ||||| ||||||||  | ||||| |||||           
T  12366619 ttcaggagcacttctctttagatgcttcaagcttcctttttgttgattccattgctctctttttttcttccagaacctaataaagatatcaaatttttgt 12366520  T
Q  112 ctatggtcctgtacacttg 130  Q
    |||||||||||||||||||    
T  12366519 ctatggtcctgtacacttg 12366501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 80
Target Start/End: Original strand, 24788381 - 24788450
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctt 80  Q
    ||||||||||| |||| |||||| |||| |||||||| |||||||||||||||| |||||| ||| ||||    
T  24788381 cttcaggagcacttctcttcagatgcttcaagcttccattttgttgattcatttgctctcttttggtctt 24788450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 54
Target Start/End: Complemental strand, 16556619 - 16556576
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttcctttttgt 54  Q
    |||||||||||||| | |||||||||||||||||||||||||||    
T  16556619 cttcaggagcagttttcttcagacgctttaagcttcctttttgt 16556576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 54
Target Start/End: Original strand, 16609043 - 16609086
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttcctttttgt 54  Q
    |||||||||||||| | |||||||||||||||||||||||||||    
T  16609043 cttcaggagcagttttcttcagacgctttaagcttcctttttgt 16609086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 21695658 - 21695736
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 89  Q
    ||||| ||||| |||| |||| ||| || ||||||||||||||||||||| ||  |||||| |||||||| ||||||||    
T  21695658 cttcaagagcacttctcttcaaacgattcaagcttcctttttgttgattccttaactctcttttgttcttccagaacct 21695736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 29935228 - 29935170
Alignment:
Q  31 agacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 89  Q
    ||||| |||||||||||||||||||||||| ||  |||||| |||||||| ||||||||    
T  29935228 agacgatttaagcttcctttttgttgattccttagctctcttttgttcttccagaacct 29935170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 58
Target Start/End: Original strand, 8183234 - 8183282
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagctt-cctttttgttgat 58  Q
    |||||||||||||| | |||||||||||||||||| |||||||||||||    
T  8183234 cttcaggagcagttttattcagacgctttaagcttccctttttgttgat 8183282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 58
Target Start/End: Original strand, 27871983 - 27872031
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagctt-cctttttgttgat 58  Q
    |||||||||||||| | |||||||||||||||||| |||||||||||||    
T  27871983 cttcaggagcagttttcttcagacgctttaagcttccctttttgttgat 27872031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 130
Target Start/End: Original strand, 331938 - 332057
Alignment:
Q  11 cttcaggagcagttctt-ttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnn 109  Q
    |||||||||||||||   |||||| ||||||||||||| |||||||| ||| ||  |||||| |||||||| |||||||  | ||||||||||||         
T  331938 cttcaggagcagttcgacttcagatgctttaagcttcc-ttttgttgtttccttagctctcttttgttcttccagaaccaatataagatgtcaaattttt 332036  T
Q  110 nnctatggtcctgtacacttg 130  Q
      |||||||| ||||||||||    
T  332037 gtctatggtcttgtacacttg 332057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 1293258 - 1293301
Alignment:
Q  15 aggagcagttcttttcagacgctttaagctt-cctttttgttga 57  Q
    |||||||||| |||||||||||||||||||| ||||||||||||    
T  1293258 aggagcagtttttttcagacgctttaagcttccctttttgttga 1293301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 104
Target Start/End: Original strand, 5826254 - 5826349
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtcaaa 104  Q
    |||||||||||||| | |||| | ||||||||||| |||||||||||||  |||| |||| || |||||||| ||  ||| |||||||||||||||    
T  5826254 cttcaggagcagttttcttcatatgctttaagcttccctttttgttgatgtatttgctctttatttgttcttccaagaccattttaagatgtcaaa 5826349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 14425699 - 14425757
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagctt-cctttttgttgat 58  Q
    |||||||||||||| | ||||||| | ||||||| |||||||||| |||||||||||||    
T  14425699 agcactttgtcttcngtagcagttttcttcagacactttaagcttccctttttgttgat 14425757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 26 - 80
Target Start/End: Complemental strand, 19710855 - 19710800
Alignment:
Q  26 ttttcagacgctttaagcttc-ctttttgttgattcattttctctctattgttctt 80  Q
    |||||||| |||||| ||||| |||||||||||||||||| |||||| ||||||||    
T  19710855 ttttcagatgctttaggcttctctttttgttgattcatttgctctcttttgttctt 19710800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 58
Target Start/End: Complemental strand, 32264594 - 32264546
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagctt-cctttttgttgat 58  Q
    |||||||||||||| | |||||||||||||| ||| |||||||||||||    
T  32264594 cttcaggagcagttttcttcagacgctttaaacttccctttttgttgat 32264546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 85; Significance: 1e-40; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 22317888 - 22318017
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgt 100  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||||||||  ||||||||||||||||||    
T  22317888 agcactttgacttcaggagcagttctcttcagacgctttaagcttcctttttgttgattcctttgctctctattgttcttctagaacctttttaagatgt 22317987  T
Q  101 caaannnnnnnctatggtcctgtacacttg 130  Q
    ||||       |||||||||||||||||||    
T  22317988 caaatttttgtctatggtcctgtacacttg 22318017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 20151874 - 20151771
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgt 100  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||||||||| |||  ||| ||||||||||||||| ||  |||||||||||||||    
T  20151874 agcactttgtcttcaggagcagttttcttcagacgctttaagcttcctttttgttaattactttgctctctattgttcttccaagacctttttaagatgt 20151775  T
Q  101 caaa 104  Q
    ||||    
T  20151774 caaa 20151771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 23235283 - 23235412
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgt 100  Q
    ||||||||| ||||| ||||| |||| |||||||||||||||||| ||||||||||||||| || |||||| ||||||||  ||||||| ||||||||||    
T  23235283 agcactttgacttcaagagcacttctcttcagacgctttaagcttactttttgttgattcaattgctctcttttgttcttctagaacctatttaagatgt 23235382  T
Q  101 caaannnnnnnctatggtcctgtacacttg 130  Q
    ||||       |||||||||||||||||||    
T  23235383 caaatttttgtctatggtcctgtacacttg 23235412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 28711537 - 28711433
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcct-ttttgttgattcattttctctctattgttctttcagaacctttttaagatg 99  Q
    |||||||||||||||||||||||| | |||| |||||||||||||||| |||||||||||| ||| |||| |||||||||| ||  ||||||||||||||    
T  28711537 agcactttgtcttcaggagcagttttcttcaaacgctttaagcttccttttttgttgattcctttgctctttattgttcttccaagacctttttaagatg 28711438  T
Q  100 tcaaa 104  Q
    |||||    
T  28711437 tcaaa 28711433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 25829385 - 25829468
Alignment:
Q  6 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 89  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||| |||||| |||||||| ||||||||    
T  25829385 tttgtcttcaggagcacttctcttcagacgctttaagcttcctttttgttgattcctttgctctcttttgttcttccagaacct 25829468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 11 - 130
Target Start/End: Original strand, 38781666 - 38781785
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnn 110  Q
    ||||||||||  |||| |||||| |||| |||||||||||||||||||||| || |||||| |||||||| |||||||||||||||||| ||||          
T  38781666 cttcaggagcgcttctcttcagatgcttcaagcttcctttttgttgattcaattgctctcttttgttcttccagaacctttttaagatgacaaatttttg 38781765  T
Q  111 nctatggtcctgtacacttg 130  Q
     |||||||||||||||||||    
T  38781766 tctatggtcctgtacacttg 38781785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 5 - 104
Target Start/End: Complemental strand, 28701032 - 28700932
Alignment:
Q  5 ctttgtcttcaggagcagttcttttcagacgctttaagcttcc-tttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 103  Q
    |||| ||||||||||||||| | |||||||||||||||||||| ||||||||||||| ||| |||| |||||||||| ||  ||||||||||||||||||    
T  28701032 ctttatcttcaggagcagttttcttcagacgctttaagcttccctttttgttgattcctttgctctttattgttcttccaagacctttttaagatgtcaa 28700933  T
Q  104 a 104  Q
    |    
T  28700932 a 28700932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 30667265 - 30667353
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 89  Q
    ||||||||| |||| |||||| |||| |||||| |||| |||||||||||||||||||||| || ||||||||||||||| ||||||||    
T  30667265 agcactttgacttcgggagcacttctcttcagatgcttcaagcttcctttttgttgattcaattgctctctattgttcttccagaacct 30667353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 11 - 130
Target Start/End: Complemental strand, 13963824 - 13963705
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnn 110  Q
    ||||||||||| ||||||||||| | || || | |||||||||||||||| ||| |||||| |||||||| |||||||| ||||||||||||||          
T  13963824 cttcaggagcacttcttttcagatgtttcaaacgtcctttttgttgattcctttgctctcttttgttcttccagaacctatttaagatgtcaaatttttg 13963725  T
Q  111 nctatggtcctgtacacttg 130  Q
     |||||||| ||||||||||    
T  13963724 tctatggtcatgtacacttg 13963705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 31800710 - 31800606
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctctattgttctttcagaacctttttaagatg 99  Q
    |||||||| ||||||||||||||| | |||||||||||||||||| ||||||||||||||| |||  ||| |||||||||| ||  || ||||||| |||    
T  31800710 agcactttatcttcaggagcagttttcttcagacgctttaagcttccctttttgttgattcctttgttctttattgttcttccaagacatttttaatatg 31800611  T
Q  100 tcaaa 104  Q
    |||||    
T  31800610 tcaaa 31800606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 104
Target Start/End: Complemental strand, 1586855 - 1586760
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtcaaa 104  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||||  |||| |||| || |||||||| ||  |||||||||||||||||||    
T  1586855 cttcaggagcagtttttttcagacgctttaagcttccctttttgttgatgtatttgctctttatttgttcttccaagacctttttaagatgtcaaa 1586760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 22260686 - 22260769
Alignment:
Q  6 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 89  Q
    |||||||||||||||| |||| ||||||||| |||| |||||||||||||||||| ||| |||||| ||||||||  |||||||    
T  22260686 tttgtcttcaggagcacttctcttcagacgccttaaacttcctttttgttgattcctttgctctcttttgttcttctagaacct 22260769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 6573962 - 6573861
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgt 100  Q
    |||||||||||||||| |||| || | |||||| | ||||||||||||||||||| |||| ||| ||| ||||||||||| ||  | |||||||||||||    
T  6573962 agcactttgtcttcagaagcatttttcttcagatgttttaagcttcctttttgttaattcctttgctccctattgttcttccaagatctttttaagatgt 6573863  T
Q  101 ca 102  Q
    ||    
T  6573862 ca 6573861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 11 - 104
Target Start/End: Complemental strand, 9015185 - 9015092
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 104  Q
    ||||| ||||| |||| |||||| |||| |||||||| |||||||||||| ||| |||||| |||||||| |||||||| |||||||| |||||    
T  9015185 cttcaagagcacttctcttcagatgcttcaagcttccattttgttgattcctttgctctcttttgttcttccagaacctatttaagatttcaaa 9015092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 30621463 - 30621592
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgt 100  Q
    ||||||||| ||||  ||||| |||| || ||| |||| |||||||||||||||||||||  || ||||||||||||||| ||||||||  | ||||| |    
T  30621463 agcactttgacttcgagagcacttctctttagatgcttgaagcttcctttttgttgattccattgctctctattgttcttccagaacctaataaagatat 30621562  T
Q  101 caaannnnnnnctatggtcctgtacacttg 130  Q
    ||||       |||||||||||||||||||    
T  30621563 caaatttatgtctatggtcctgtacacttg 30621592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 30624084 - 30624213
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgt 100  Q
    ||||||||| ||||  ||||| |||| || ||| |||| |||||||||||||||||||||  || ||||||||||||||| ||||||||  | ||||| |    
T  30624084 agcactttgacttcgagagcacttctctttagatgcttgaagcttcctttttgttgattccattgctctctattgttcttccagaacctaataaagatat 30624183  T
Q  101 caaannnnnnnctatggtcctgtacacttg 130  Q
    ||||       |||||||||||||||||||    
T  30624184 caaatttatgtctatggtcctgtacacttg 30624213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 20568568 - 20568485
Alignment:
Q  6 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 89  Q
    |||||||||||||||| || | ||||||||  ||||||||||||||||||||||| ||| |||||| ||||||||  |||||||    
T  20568568 tttgtcttcaggagcacttatcttcagacgtcttaagcttcctttttgttgattcctttactctcttttgttcttcaagaacct 20568485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 60
Target Start/End: Complemental strand, 30557103 - 30557053
Alignment:
Q  10 tcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattc 60  Q
    ||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  30557103 tcttcaggagcagttttcttcagacgctttaagcttcctttttgttgattc 30557053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 104
Target Start/End: Complemental strand, 45086945 - 45086855
Alignment:
Q  15 aggagcagttcttttcagacgctttaagcttcc-tttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 104  Q
    |||||||||| | |||||||||||||||||||| |||||||||| |  ||| |||| |||||||||| || |||||||||||||| |||||    
T  45086945 aggagcagttttcttcagacgctttaagcttccctttttgttgacttctttgctctttattgttcttccaaaacctttttaagatatcaaa 45086855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 25037092 - 25036966
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgt 100  Q
    |||| |||| ||||| ||||| |||| |||||| |||||||||||| ||||||||||||| ||| |||||| || ||||| ||||||||  | ||||| |    
T  25037092 agcattttgacttcatgagcacttctcttcagatgctttaagcttcgtttttgttgattcctttgctctctttttttcttccagaacctaataaagatat 25036993  T
Q  101 caaannnnnnnctatggtcctgtacac 127  Q
    ||||       ||||||||||||||||    
T  25036992 caaatttctgtctatggtcctgtacac 25036966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 25041199 - 25041073
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgt 100  Q
    |||| |||| ||||| ||||| |||| |||||| |||||||||||| ||||||||||||| ||| |||||| || ||||| ||||||||  | ||||| |    
T  25041199 agcattttgacttcatgagcacttctcttcagatgctttaagcttcgtttttgttgattcctttgctctctttttttcttccagaacctaataaagatat 25041100  T
Q  101 caaannnnnnnctatggtcctgtacac 127  Q
    ||||       ||||||||||||||||    
T  25041099 caaatttctgtctatggtcctgtacac 25041073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 103
Target Start/End: Complemental strand, 31327770 - 31327677
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttc-ctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 103  Q
    |||||||||||||| | ||||| ||| ||||||||| |||||||||||| | ||| |||| |||||||||| ||| ||||||||||||| ||||    
T  31327770 cttcaggagcagttttcttcaggcgcgttaagcttctctttttgttgatgcctttgctctttattgttcttccaggacctttttaagatatcaa 31327677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 103
Target Start/End: Complemental strand, 31334491 - 31334398
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttc-ctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 103  Q
    |||||||||||||| | ||||| ||| ||||||||| |||||||||||| | ||| |||| |||||||||| ||| ||||||||||||| ||||    
T  31334491 cttcaggagcagttttcttcaggcgcgttaagcttctctttttgttgatgcctttgctctttattgttcttccaggacctttttaagatatcaa 31334398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 104
Target Start/End: Complemental strand, 34321725 - 34321624
Alignment:
Q  5 ctttgtcttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtca 102  Q
    |||| ||||||||||||||| | |||||||||||||| ||| |||||||||||||  |||| |||| || |||||||| ||  |||||||||||||||||    
T  34321725 ctttatcttcaggagcagttttcttcagacgctttaaacttccctttttgttgatgtatttgctctttatttgttcttccaagacctttttaagatgtca 34321626  T
Q  103 aa 104  Q
    ||    
T  34321625 aa 34321624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 10 - 69
Target Start/End: Original strand, 6392921 - 6392980
Alignment:
Q  10 tcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctct 69  Q
    ||||||||||||||| | ||||||||||||||||||||||| ||||||||| ||| ||||    
T  6392921 tcttcaggagcagttttcttcagacgctttaagcttcctttgtgttgattcctttgctct 6392980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 18376751 - 18376673
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 89  Q
    ||||||||||| || | |||||| |||| ||||||||||||||||||||| ||  |||||| |||||||| ||||||||    
T  18376751 cttcaggagcatttttcttcagatgcttcaagcttcctttttgttgattccttagctctcttttgttcttccagaacct 18376673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 38631237 - 38631318
Alignment:
Q  8 tgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 89  Q
    |||||||||||||| |||| |||||| |||| ||||||| ||||||||||||  ||| |||||| ||||| || ||||||||    
T  38631237 tgtcttcaggagcacttctcttcagatgcttcaagcttcatttttgttgatttctttgctctcttttgtttttccagaacct 38631318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 104
Target Start/End: Original strand, 22802754 - 22802854
Alignment:
Q  5 ctttgtcttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 103  Q
    |||| |||||| ||||| || | |||||||||||||||||| ||||||||||||||   || |||| |||||||||| ||  ||||||||||||| ||||    
T  22802754 ctttatcttcatgagcaattttcttcagacgctttaagcttccctttttgttgatttcattactctttattgttcttccaagacctttttaagatatcaa 22802853  T
Q  104 a 104  Q
    |    
T  22802854 a 22802854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 19540684 - 19540762
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 89  Q
    |||||||| || || | |||||||||||||||||| |||||||||||||| ||  |||||| |||||||| || |||||    
T  19540684 cttcaggaacacttttcttcagacgctttaagctttctttttgttgattccttagctctcttttgttcttccaaaacct 19540762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 22187933 - 22187855
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 89  Q
    ||||||||||| |||| |||||| |||| |||||||||||||| |||||| ||| |||| | |||||||| || |||||    
T  22187933 cttcaggagcacttctcttcagatgcttcaagcttcctttttgctgattcctttgctctattttgttcttccataacct 22187855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 24850480 - 24850402
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 89  Q
    ||||||||||| || | |||||| |||| ||||||||||||||||||||| ||  |||||| ||||||||  |||||||    
T  24850480 cttcaggagcacttttcttcagatgcttcaagcttcctttttgttgattccttagctctcttttgttcttcgagaacct 24850402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 28140454 - 28140400
Alignment:
Q  6 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattc 60  Q
    |||| ||||||||||| |||| |||||||| | ||||||||||||||||||||||    
T  28140454 tttgacttcaggagcacttctcttcagacgttctaagcttcctttttgttgattc 28140400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 60
Target Start/End: Complemental strand, 10009582 - 10009533
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattc 60  Q
    ||||||||||| |||| |||||| |||| |||||||||||||||||||||    
T  10009582 cttcaggagcacttctcttcagatgcttcaagcttcctttttgttgattc 10009533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 80
Target Start/End: Original strand, 24377356 - 24377425
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctt 80  Q
    ||||||||||| |||| |||||| ||||  ||||||||||||||||||||  || |||||| ||||||||    
T  24377356 cttcaggagcacttctcttcagatgcttctagcttcctttttgttgattctattgctctcttttgttctt 24377425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 58
Target Start/End: Complemental strand, 22776127 - 22776079
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagctt-cctttttgttgat 58  Q
    |||||||||||||| | |||||||||||||||||| |||||||||||||    
T  22776127 cttcaggagcagttttcttcagacgctttaagcttccctttttgttgat 22776079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 58
Target Start/End: Complemental strand, 22781505 - 22781457
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagctt-cctttttgttgat 58  Q
    |||||||||||||| | |||||||||||||||||| |||||||||||||    
T  22781505 cttcaggagcagttttcttcagacgctttaagcttccctttttgttgat 22781457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 130
Target Start/End: Complemental strand, 31967865 - 31967744
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtcaaannnn 108  Q
    |||||| ||||||| | |||| ||||||||||||| |||||||||||||  |||| |||| || |||||||||||  |||  ||||||||||||||        
T  31967865 cttcagaagcagttttcttcaaacgctttaagcttccctttttgttgatgtatttgctctttatttgttctttcaagaccaatttaagatgtcaaatttt 31967766  T
Q  109 nnnctatggtcctgtacacttg 130  Q
       |||| ||||||||||||||    
T  31967765 tgtctatagtcctgtacacttg 31967744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 60
Target Start/End: Original strand, 40782757 - 40782805
Alignment:
Q  12 ttcaggagcagttcttttcagacgctttaagcttcctttttgttgattc 60  Q
    |||||||||| |||| |||||| |||| |||||||||||||||||||||    
T  40782757 ttcaggagcacttctcttcagatgcttcaagcttcctttttgttgattc 40782805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 58
Target Start/End: Original strand, 44840709 - 44840757
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagctt-cctttttgttgat 58  Q
    |||||||||||||| | |||||||||||||||||| |||||||||||||    
T  44840709 cttcaggagcagttttcttcagacgctttaagcttccctttttgttgat 44840757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 100
Target Start/End: Original strand, 3277274 - 3277365
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgt 100  Q
    |||||||||||||| | |||| | ||||||||||| |||||||||||||  |||| |||| || |||||||| ||  |||||||||||||||    
T  3277274 cttcaggagcagttttcttcataagctttaagcttccctttttgttgatgtatttgctctttatttgttcttccaagacctttttaagatgt 3277365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 33074518 - 33074576
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagctt-cctttttgttgat 58  Q
    |||||||| |||||||||||| || | |||||||| ||||||||| |||||||||||||    
T  33074518 agcactttatcttcaggagcaattttcttcagacgttttaagcttccctttttgttgat 33074576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 11 - 60
Target Start/End: Complemental strand, 23184161 - 23184112
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattc 60  Q
    ||||||||||| || | |||||| |||| |||||||||||||||||||||    
T  23184161 cttcaggagcacttttcttcagatgcttcaagcttcctttttgttgattc 23184112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 11 - 60
Target Start/End: Complemental strand, 23595418 - 23595369
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattc 60  Q
    ||||||||||| || | |||||| |||| |||||||||||||||||||||    
T  23595418 cttcaggagcacttttcttcagatgcttcaagcttcctttttgttgattc 23595369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 11 - 60
Target Start/End: Complemental strand, 39037471 - 39037422
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattc 60  Q
    |||||| |||| |||| |||||| |||| |||||||||||||||||||||    
T  39037471 cttcagtagcacttctcttcagatgcttcaagcttcctttttgttgattc 39037422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 59
Target Start/End: Complemental strand, 22454805 - 22454757
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgatt 59  Q
    ||||||||||| || | |||||| |||| ||||||||||||||||||||    
T  22454805 cttcaggagcacttttcttcagatgcttcaagcttcctttttgttgatt 22454757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 58
Target Start/End: Original strand, 40332366 - 40332414
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagctt-cctttttgttgat 58  Q
    ||||| |||||||| | |||||||||||||||||| |||||||||||||    
T  40332366 cttcaagagcagttttcttcagacgctttaagcttccctttttgttgat 40332414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 84; Significance: 5e-40; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 21933175 - 21933278
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgt 100  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||    
T  21933175 agcactttgacttcaggagcagttctcttcagacgctttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgt 21933274  T
Q  101 caaa 104  Q
    ||||    
T  21933275 caaa 21933278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 18121001 - 18120872
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgt 100  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| |||||| |||||||| |||||||| || | ||| |    
T  18121001 agcactttgtcttcaggagcagttctcttcaaacgctttaagcttcctttttgttgattcatttgctctcttttgttcttccagaacctattgatgatct 18120902  T
Q  101 caaannnnnnnctatggtcctgtacacttg 130  Q
    ||||       |||||||||||||||||||    
T  18120901 caaatttttgtctatggtcctgtacacttg 18120872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 17441700 - 17441597
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgt 100  Q
    ||||||||| ||||||||||| |||| |||||||||||||||||||||||| |||||||| ||| |||||| |||||||| |||||||| ||||||||||    
T  17441700 agcactttgacttcaggagcacttctcttcagacgctttaagcttccttttcgttgattcctttgctctcttttgttcttccagaacctatttaagatgt 17441601  T
Q  101 caaa 104  Q
    ||||    
T  17441600 caaa 17441597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 30421319 - 30421216
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgt 100  Q
    |||| ||||||||||||||||||| | |||||||||||||||||||||||||||| |||| ||| ||||||||||||||| ||  |||||||||||||||    
T  30421319 agcagtttgtcttcaggagcagttttgttcagacgctttaagcttcctttttgttaattcctttgctctctattgttcttccaagacctttttaagatgt 30421220  T
Q  101 caaa 104  Q
    ||||    
T  30421219 caaa 30421216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 20382273 - 20382144
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgt 100  Q
    ||||||||| ||||||||||| |||| ||||||||||| |||||||||||||||||||||  || |||||| |||||||||||||||||  | |||||||    
T  20382273 agcactttgacttcaggagcacttctcttcagacgcttcaagcttcctttttgttgattccattactctcttttgttctttcagaacctaataaagatgt 20382174  T
Q  101 caaannnnnnnctatggtcctgtacacttg 130  Q
    ||||       |||||||||||||||||||    
T  20382173 caaatttttgtctatggtcctgtacacttg 20382144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 16189273 - 16189376
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgt 100  Q
    |||||| || ||||| ||||| |||| ||||||||||| ||||||||||||||||||||||||| |||||| |||||||| |||||||| ||||||||||    
T  16189273 agcactgtgacttcaagagcacttctcttcagacgcttcaagcttcctttttgttgattcatttgctctcttttgttcttccagaacctatttaagatgt 16189372  T
Q  101 caaa 104  Q
    ||||    
T  16189373 caaa 16189376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 23185119 - 23185016
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgt 100  Q
    ||||||||||||||| |||||  | | ||||||||||||||||||||||||||||  ||||||| ||||||||||||||| || || |||||||||||||    
T  23185119 agcactttgtcttcaagagcaaatttcttcagacgctttaagcttcctttttgttagttcatttgctctctattgttcttccaaaatctttttaagatgt 23185020  T
Q  101 caaa 104  Q
    ||||    
T  23185019 caaa 23185016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 20255445 - 20255357
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 89  Q
    ||||||||| |||||||||||||||| |||||||||||||| |||||||||||||||||| ||| |||||| ||||| || ||||||||    
T  20255445 agcactttgacttcaggagcagttctcttcagacgctttaaacttcctttttgttgattcctttgctctcttttgttgttccagaacct 20255357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 130
Target Start/End: Original strand, 22745754 - 22745873
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnn 110  Q
    ||||| ||||| |||| ||||||| ||||||||||||||||||||||||| ||| |||| | |||||||| |||||||| ||||||||||||||          
T  22745754 cttcatgagcacttctcttcagacactttaagcttcctttttgttgattcctttgctcttttttgttcttccagaacctatttaagatgtcaaatttttg 22745853  T
Q  111 nctatggtcctgtacacttg 130  Q
     |||| ||||||||||||||    
T  22745854 tctatcgtcctgtacacttg 22745873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 19156456 - 19156544
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 89  Q
    ||||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||| | ||| |||||| ||||||||  |||||||    
T  19156456 agcactttgacttcaggagcacttctcttcagacgctttaagcttcctttttgttgatccctttgctctcttttgttcttctagaacct 19156544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 28 - 103
Target Start/End: Original strand, 16207556 - 16207631
Alignment:
Q  28 ttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 103  Q
    |||||| |||| ||| ||||||||||||||||||||| |||||| |||||||| ||||||||||||||||||||||    
T  16207556 ttcagatgcttcaagattcctttttgttgattcatttgctctcttttgttcttccagaacctttttaagatgtcaa 16207631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 104
Target Start/End: Original strand, 1237946 - 1238046
Alignment:
Q  5 ctttgtcttcaggagcagttcttttcagacgctttaagcttcc-tttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 103  Q
    |||| |||||| |||||||| | |||||| ||||||||||||| ||||||||||||| ||| |||| |||||||||| ||  ||||||||||||||||||    
T  1237946 ctttatcttcatgagcagttttcttcagatgctttaagcttccctttttgttgattcctttgctctttattgttcttccaagacctttttaagatgtcaa 1238045  T
Q  104 a 104  Q
    |    
T  1238046 a 1238046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 16681176 - 16681095
Alignment:
Q  6 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 89  Q
    |||||||||||||||| |||| ||||||||||||||||||| ||||||||||||||||| || ||  |||||||| ||||||||    
T  16681176 tttgtcttcaggagcacttctcttcagacgctttaagcttcatttttgttgattcatttgctatc--ttgttcttccagaacct 16681095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 104
Target Start/End: Complemental strand, 45538328 - 45538228
Alignment:
Q  5 ctttgtcttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 103  Q
    |||| ||||||||||||||| | |||||||||||||||||| ||||||||||||||  ||| |||| |||||||||| ||  ||||||||||| ||||||    
T  45538328 ctttatcttcaggagcagttttcttcagacgctttaagcttccctttttgttgatttctttgctctttattgttcttccaagacctttttaagttgtcaa 45538229  T
Q  104 a 104  Q
    |    
T  45538228 a 45538228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 103
Target Start/End: Original strand, 9320864 - 9320963
Alignment:
Q  5 ctttgtcttcaggagcagttcttttcagacgctttaagcttcc-tttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 103  Q
    |||| |||||||||| |||| | |||||||||||||| ||||| ||||||||||||| ||| |||| |||||||||| ||  ||||||||||||||||||    
T  9320864 ctttatcttcaggagtagttttcttcagacgctttaatcttccctttttgttgattcctttgctctttattgttcttccaagacctttttaagatgtcaa 9320963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 104
Target Start/End: Complemental strand, 24832923 - 24832828
Alignment:
Q  10 tcttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 104  Q
    ||||||||||||||| | |||||||||||||||||| ||||||||||||||  ||| |||| |||||||||| ||  ||||||||||||| |||||    
T  24832923 tcttcaggagcagttttcttcagacgctttaagcttccctttttgttgatttctttgctctttattgttcttccaagacctttttaagatatcaaa 24832828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 11 - 104
Target Start/End: Complemental strand, 15335909 - 15335815
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttcc-tttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 104  Q
    |||||||||||||| | ||||||| |||||||||||| ||||||||||||| ||| |||| |||||||||| ||  ||||||||||||| |||||    
T  15335909 cttcaggagcagttttcttcagacactttaagcttccctttttgttgattcctttgctctttattgttcttccaagacctttttaagatatcaaa 15335815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 11 - 104
Target Start/End: Complemental strand, 15424974 - 15424880
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttcc-tttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 104  Q
    |||||||||||||| | ||||||| |||||||||||| ||||||||||||| ||| |||| |||||||||| ||  ||||||||||||| |||||    
T  15424974 cttcaggagcagttttcttcagacactttaagcttccctttttgttgattcctttgctctttattgttcttccaagacctttttaagatatcaaa 15424880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 11 - 104
Target Start/End: Complemental strand, 15516278 - 15516184
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttcc-tttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 104  Q
    |||||||||||||| | ||||||| |||||||||||| ||||||||||||| ||| |||| |||||||||| ||  ||||||||||||| |||||    
T  15516278 cttcaggagcagttttcttcagacactttaagcttccctttttgttgattcctttgctctttattgttcttccaagacctttttaagatatcaaa 15516184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 130
Target Start/End: Complemental strand, 40845245 - 40845118
Alignment:
Q  5 ctttgtcttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtca 102  Q
    |||| ||||||||||||||| | |||||||||||||||||| |||||||||||||  |||| |||| || |||||||| ||  |||||||||||||||||    
T  40845245 ctttatcttcaggagcagttttcttcagacgctttaagcttccctttttgttgatgtatttgctctttatttgttcttccaagacctttttaagatgtca 40845146  T
Q  103 aannnnnnnctatggtcctgtacacttg 130  Q
    ||       |||| ||||||||||||||    
T  40845145 aatttttgtctatagtcctgtacacttg 40845118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 17267745 - 17267833
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 89  Q
    ||||||||| |||||||  || |||| |||||| |||| ||||||||||||||||||||| ||| |||||| |||||||| ||||||||    
T  17267745 agcactttgacttcaggcacacttctcttcagatgcttcaagcttcctttttgttgattcctttgctctcttttgttcttccagaacct 17267833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 17797695 - 17797800
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcc---tttttgttgattcattttctctctattgttctttcagaacctttttaaga 97  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||   ||||||||||||| ||| || | |||| ||||| ||  | ||||||||||    
T  17797695 agcactttgtcttcaggagcagtt-ttttcagatgctttaagcttccttttttttgttgattcctttgctatttattattcttccaagatctttttaaga 17797793  T
Q  98 tgtcaaa 104  Q
    |||||||    
T  17797794 tgtcaaa 17797800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 39693810 - 39693897
Alignment:
Q  2 gcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 89  Q
    |||||||| |||||| |||| |||| ||| || |||||||||||| ||||||||||||||||| |||||| | |||||| ||||||||    
T  39693810 gcactttgacttcagaagcacttctcttcggatgctttaagcttcttttttgttgattcatttgctctctttcgttcttccagaacct 39693897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 6407991 - 6408122
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagat 98  Q
    ||||||||  |||||||||||||| | |||| ||||||||||||| |||||||||||||  |||| |||| || |||||||| ||  |||||||||||||    
T  6407991 agcactttaacttcaggagcagttttcttcaaacgctttaagcttccctttttgttgatgtatttgctctttatttgttcttccaagacctttttaagat 6408090  T
Q  99 gtcaaannnnnnnctatggtcctgtacacttg 130  Q
    ||||||       |||| ||||||||||||||    
T  6408091 gtcaaatttttgtctatagtcctgtacacttg 6408122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 85
Target Start/End: Complemental strand, 17525601 - 17525523
Alignment:
Q  7 ttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcaga 85  Q
    ||||||||||||||| ||||||||||| |||| || |||| ||||||||||||  ||| |||||| |||||||||||||    
T  17525601 ttgtcttcaggagcacttcttttcagatgcttcaatcttcatttttgttgatttctttgctctcttttgttctttcaga 17525523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 80
Target Start/End: Original strand, 29693596 - 29693670
Alignment:
Q  6 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctt 80  Q
    |||||||||| ||||| |||| |||||| |||||||||||||||||||||||||| | | |||||| ||||||||    
T  29693596 tttgtcttcaagagcacttctcttcagatgctttaagcttcctttttgttgattcctctgctctcttttgttctt 29693670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 104
Target Start/End: Original strand, 36105504 - 36105605
Alignment:
Q  5 ctttgtcttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtca 102  Q
    |||| ||||||||||||||| | ||||||| |||||||||| |||||||||||||  |||| |||| || |||||||| ||  |||||||||||||||||    
T  36105504 ctttatcttcaggagcagttttcttcagacactttaagcttccctttttgttgatgtatttgctctttatttgttcttccaatacctttttaagatgtca 36105603  T
Q  103 aa 104  Q
    ||    
T  36105604 aa 36105605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 130
Target Start/End: Complemental strand, 14989325 - 14989205
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttcc-tttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtcaaannnn 108  Q
    |||||||||||||| | |||||||||||||||||||| |||||||||||  |||| |||| || ||||||||||| |  |||||||||||||||||        
T  14989325 cttcaggagcagttttcttcagacgctttaagcttccatttttgttgatgtatttgctctttacttgttctttca-agactttttaagatgtcaaatttt 14989227  T
Q  109 nnnctatggtcctgtacacttg 130  Q
       |||| ||||||||||||||    
T  14989226 tgtctatagtcctgtacacttg 14989205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 17914733 - 17914821
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 89  Q
    ||||||||| ||| ||||||| |||| |||||| |||| ||||||||||| ||||||||| ||| |||||| || ||||| ||||||||    
T  17914733 agcactttgactttaggagcacttctcttcagatgcttcaagcttcctttctgttgattcctttgctctcttttattcttccagaacct 17914821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 103
Target Start/End: Original strand, 19943520 - 19943613
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttcctttttg-ttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 103  Q
    ||||||||||| |||| |||||| |||| ||||||| |||||| |||||||  || |||||| ||||||||  ||||||| |||||||||||||    
T  19943520 cttcaggagcacttctcttcagatgcttcaagcttcttttttggttgattccattactctcttttgttcttctagaacctatttaagatgtcaa 19943613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 130
Target Start/End: Complemental strand, 18151530 - 18151410
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttcc-tttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtcaaannnn 108  Q
    |||||||||||||| | |||||||||||||||||||| |||||||||||  |||| |||| || ||||||||||| |  ||||||||| |||||||        
T  18151530 cttcaggagcagttttcttcagacgctttaagcttccatttttgttgatgtatttgctctttacttgttctttca-agactttttaagttgtcaaatttt 18151432  T
Q  109 nnnctatggtcctgtacacttg 130  Q
       |||| ||||||||||||||    
T  18151431 tgtctatagtcctgtacacttg 18151410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 19927335 - 19927423
Alignment:
Q  17 gagcagttcttttcagacgctttaagcttcc-tttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 104  Q
    |||||||| | || ||||||||||||||||| ||||||||| ||| ||| |||| |||||||||| ||  ||||||||||||| |||||    
T  19927335 gagcagttttctttagacgctttaagcttccctttttgttggttcctttgctctttattgttcttccaagacctttttaagatatcaaa 19927423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 104
Target Start/End: Complemental strand, 13430501 - 13430406
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtcaaa 104  Q
    |||||||||||||| | |||||||||||||||||| |||||||||||||  | || |||| || |||||||||||  |||  ||||||||||||||    
T  13430501 cttcaggagcagttttcttcagacgctttaagcttccctttttgttgatgtacttgctctttatttgttctttcaagaccaatttaagatgtcaaa 13430406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 130
Target Start/End: Complemental strand, 602582 - 602483
Alignment:
Q  31 agacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnnnctatggtcctgtacacttg 130  Q
    |||||||| || |||||||||||||||||| ||  |||||| |||||||| ||||||||  | ||||| |||||       |||||||||||||||||||    
T  602582 agacgcttcaaacttcctttttgttgattccttagctctcttttgttcttccagaacctaataaagatatcaaatttttgtctatggtcctgtacacttg 602483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 130
Target Start/End: Original strand, 24646621 - 24646740
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnn 110  Q
    ||||||||||| |||| |  ||| |||| |||||||||||||||||||||  ||  | ||| |||||||| || ||||| ||||||||||||||          
T  24646621 cttcaggagcacttctctctagatgcttcaagcttcctttttgttgattccattggtatcttttgttcttccaaaacctatttaagatgtcaaatttttt 24646720  T
Q  111 nctatggtcctgtacacttg 130  Q
     ||||||||||||| |||||    
T  24646721 tctatggtcctgtatacttg 24646740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 33083135 - 33083189
Alignment:
Q  6 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattc 60  Q
    |||| ||||| ||||| |||| ||||||||||||||||||| |||||||||||||    
T  33083135 tttgacttcaagagcacttctcttcagacgctttaagcttcttttttgttgattc 33083189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 104
Target Start/End: Complemental strand, 3598198 - 3598102
Alignment:
Q  10 tcttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctctattgttctttc-agaacctttttaagatgtcaaa 104  Q
    ||||||||||||||| | ||||||||||||||| || ||| ||||||||||| |||  ||| |||||||||| | ||| | ||||||| ||||||||    
T  3598198 tcttcaggagcagttttcttcagacgctttaagtttccctctttgttgattcctttgttctgtattgttcttccaagatcttttttaaaatgtcaaa 3598102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 17702005 - 17702088
Alignment:
Q  6 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 89  Q
    |||| |||||| |||| |||| |||||| |||| |||||||||||||||||||||  |  |||||| ||||| || ||||||||    
T  17702005 tttgacttcagaagcacttctcttcagatgcttcaagcttcctttttgttgattccataactctcttttgttattccagaacct 17702088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 18680073 - 18680131
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattc 60  Q
    ||||||||| ||||||||||| | || |||||| |||| |||||||||||||||||||||    
T  18680073 agcactttgacttcaggagcact-ctcttcagatgcttaaagcttcctttttgttgattc 18680131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 130
Target Start/End: Complemental strand, 18321058 - 18320939
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnn 110  Q
    ||||||||||| |||| |||||| |||| ||||||| |||||||||||||  |  || ||| |||||||| |||||| |  | ||||| |||||          
T  18321058 cttcaggagcacttctcttcagatgcttcaagcttcttttttgttgattccatagctatcttttgttcttccagaacgtaataaagatatcaaatttttg 18320959  T
Q  111 nctatggtcctgtacacttg 130  Q
     |||||||||||||||||||    
T  18320958 tctatggtcctgtacacttg 18320939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 100
Target Start/End: Original strand, 2811103 - 2811194
Alignment:
Q  8 tgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgt 100  Q
    |||||||| || || |||| |||||| ||||||||||||| |||||||||||  ||| |||| | || ||| |||| ||||| ||||||||||    
T  2811103 tgtcttcatgaacacttctcttcagatgctttaagcttcc-ttttgttgatttctttgctcttttttattcattcataacctatttaagatgt 2811194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 18719244 - 18719299
Alignment:
Q  4 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattc 60  Q
    |||||| ||||||||||| | || |||||| |||| |||||||||||||||||||||    
T  18719244 actttgacttcaggagcact-ctcttcagatgcttaaagcttcctttttgttgattc 18719299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 58
Target Start/End: Original strand, 24551588 - 24551636
Alignment:
Q  10 tcttcaggagcagttcttttcagacgctttaagcttcctttttgttgat 58  Q
    |||||||||||||||   |||| |||||||||| |||||||||||||||    
T  24551588 tcttcaggagcagtttgcttcaaacgctttaagtttcctttttgttgat 24551636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 58
Target Start/End: Original strand, 45292894 - 45292942
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagctt-cctttttgttgat 58  Q
    ||||||| |||||| | |||||||||||||||||| |||||||||||||    
T  45292894 cttcaggtgcagttttcttcagacgctttaagcttccctttttgttgat 45292942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 84; Significance: 5e-40; HSPs: 42)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 32544550 - 32544653
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgt 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||||| || ||||||||||||||||    
T  32544550 agcactttgtcttcaggagcagttctcttcagacgctttaagcttcctttttgttgattcctttgctctctattgttcttccataacctttttaagatgt 32544649  T
Q  101 caaa 104  Q
    ||||    
T  32544650 caaa 32544653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 18435856 - 18435985
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgt 100  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||  || |||||||||||     
T  18435856 agcactttgtcttcaggagcagttctcttcagatgctttaagcttcctttttgttgattccttttctctctattgttcttccaatacatttttaagatga 18435955  T
Q  101 caaannnnnnnctatggtcctgtacacttg 130  Q
    ||||       |||||||||||||||||||    
T  18435956 caaatttttgtctatggtcctgtacacttg 18435985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 26972077 - 26971948
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgt 100  Q
    ||||||||| |||||| ||||||||| ||||||||||||||| ||||||||||||||||| ||| ||||| ||||||||| |||||||||||||||||||    
T  26972077 agcactttgacttcagaagcagttctcttcagacgctttaagattcctttttgttgattcctttgctctccattgttcttccagaacctttttaagatgt 26971978  T
Q  101 caaannnnnnnctatggtcctgtacacttg 130  Q
    ||||        ||||||||||||||||||    
T  26971977 caaatttttgtttatggtcctgtacacttg 26971948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 21235379 - 21235482
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgt 100  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||| ||| ||||||||||||||| ||  |||||||||||||||    
T  21235379 agcactttgtcttcaggagcagttttcttcagacgctttaagcttcctttttgtagattcctttgctctctattgttcttccaagacctttttaagatgt 21235478  T
Q  101 caaa 104  Q
    ||||    
T  21235479 caaa 21235482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 22802407 - 22802510
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgt 100  Q
    ||||||||||||||||||||||||  ||||||||| |||||||||||||||||||||||| ||| ||||||||||||||| ||  |||||||||||||||    
T  22802407 agcactttgtcttcaggagcagtttatttcagacgttttaagcttcctttttgttgattcctttcctctctattgttcttccaagacctttttaagatgt 22802506  T
Q  101 caaa 104  Q
    ||||    
T  22802507 caaa 22802510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 16265033 - 16264930
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgt 100  Q
    |||||||||||||||||||||||| | |||||| |||||| | ||||||||||||||||| ||| ||||||||||||||||||  |||||||||||||||    
T  16265033 agcactttgtcttcaggagcagttttcttcagatgctttaggattcctttttgttgattcctttgctctctattgttctttcaagacctttttaagatgt 16264934  T
Q  101 caaa 104  Q
    ||||    
T  16264933 caaa 16264930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 15954969 - 15955073
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctctattgttctttcagaacctttttaagatg 99  Q
    ||||||||||||| |||||||||| |||||||||||||||||||| ||||||||||||||| ||| |||| |||||||||| ||  ||||||||||||||    
T  15954969 agcactttgtcttaaggagcagtttttttcagacgctttaagcttccctttttgttgattcctttgctctttattgttcttccaagacctttttaagatg 15955068  T
Q  100 tcaaa 104  Q
    |||||    
T  15955069 tcaaa 15955073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 20730587 - 20730484
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgt 100  Q
    ||||||||||||||| |||||||| | ||||||||||| ||||||||||||||||||||  ||| ||||||||||||||| ||  |||||||||||||||    
T  20730587 agcactttgtcttcatgagcagttttcttcagacgcttaaagcttcctttttgttgatttctttgctctctattgttcttccaagacctttttaagatgt 20730488  T
Q  101 caaa 104  Q
    ||||    
T  20730487 caaa 20730484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 11 - 129
Target Start/End: Original strand, 19689008 - 19689126
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnn 110  Q
    |||||||||||  ||| ||||||||||| || |||||||||||||||||||||| |||||| |||||||| |||||||| ||||||||||||||          
T  19689008 cttcaggagcacatctcttcagacgcttcaaacttcctttttgttgattcatttgctctcttttgttcttccagaacctatttaagatgtcaaatttttg 19689107  T
Q  111 nctatggtcctgtacactt 129  Q
     ||||||||||||||||||    
T  19689108 tctatggtcctgtacactt 19689126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 9718125 - 9718213
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 89  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| ||| |||||| ||||||||  |||||||    
T  9718125 agcactttgtcttcaggagtagttctcttcagacgctttaagcttcctttttgttgattcctttgctctcttttgttcttctagaacct 9718213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 6 - 130
Target Start/End: Original strand, 21625385 - 21625509
Alignment:
Q  6 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaan 105  Q
    ||||||||||| |||  |||| |||||| |||| ||||||||| |||||||||||||||||||||| ||||||||  ||||||||| ||||||||||||     
T  21625385 tttgtcttcagaagcgcttctcttcagatgcttcaagcttcctatttgttgattcattttctctcttttgttcttcgagaacctttctaagatgtcaaat 21625484  T
Q  106 nnnnnnctatggtcctgtacacttg 130  Q
          |||||||||||||||||||    
T  21625485 ttttgtctatggtcctgtacacttg 21625509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 6 - 104
Target Start/End: Complemental strand, 34451546 - 34451448
Alignment:
Q  6 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 104  Q
    |||||||||||||||  |||| |||||| |||| |||||||||||||| |||||| ||| |||||| |||||||| |||||||||||||||||||||||    
T  34451546 tttgtcttcaggagcgcttctcttcagatgcttcaagcttcctttttgctgattcctttgctctcttttgttcttccagaacctttttaagatgtcaaa 34451448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 13435814 - 13435939
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgt 100  Q
    ||||||||  ||| ||||||| |||| |||||| |||| |||||||||||||||||||||  || |||||| ||||||||||||||||| ||||||||||    
T  13435814 agcacttttactttaggagcacttctcttcagatgcttcaagcttcctttttgttgattccattgctctcttttgttctttcagaacctatttaagatgt 13435913  T
Q  101 caaannnnnnnctatggtcctgtaca 126  Q
    ||||       |||||||||||||||    
T  13435914 caaatttttgtctatggtcctgtaca 13435939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 6 - 130
Target Start/End: Complemental strand, 15531485 - 15531361
Alignment:
Q  6 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaan 105  Q
    ||||||| |||||||  |||| |||||| ||||||||||| |||||||||||||||||| |||| | ||||| || |||||| ||||||||||||||||     
T  15531485 tttgtctacaggagcgcttctcttcagatgctttaagctttctttttgttgattcatttgctcttttttgttattccagaacttttttaagatgtcaaat 15531386  T
Q  106 nnnnnnctatggtcctgtacacttg 130  Q
          |||||||||||||||||||    
T  15531385 ttttatctatggtcctgtacacttg 15531361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 20487768 - 20487666
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgt 100  Q
    ||||| || ||||||||||||||| | ||||||||||||||||||| ||||||||||||| ||| || | |||||||||| ||  |||||||||||||||    
T  20487768 agcaccttatcttcaggagcagttttcttcagacgctttaagcttcttttttgttgattcctttgctttttattgttcttccaagacctttttaagatgt 20487669  T
Q  101 caa 103  Q
    |||    
T  20487668 caa 20487666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 29918283 - 29918388
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctt--tttgttgattcattttctctctattgttctttcagaacctttttaagat 98  Q
    |||||||||||||||| ||||||| | |||| |||||||||||||||||  ||||||||||| ||| ||||||||| ||||| ||  |||||||||||||    
T  29918283 agcactttgtcttcagaagcagttttcttcatacgctttaagcttccttgatttgttgattcctttgctctctattattcttccaagacctttttaagat 29918382  T
Q  99 gtcaaa 104  Q
    ||||||    
T  29918383 gtcaaa 29918388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 19086432 - 19086520
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 89  Q
    ||||||||| ||||||||||| |||| ||||||||||| ||||||||||||||||||||| ||  |||||| |||||||| ||||||||    
T  19086432 agcactttgacttcaggagcacttctcttcagacgcttcaagcttcctttttgttgattccttagctctcttttgttcttccagaacct 19086520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 104
Target Start/End: Complemental strand, 19832864 - 19832764
Alignment:
Q  5 ctttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtcaa 103  Q
    |||| ||||||||||||||| | |||||||||||||||||||||||||||||||  |||| |||| || |||||||| ||  ||||||||||||||||||    
T  19832864 ctttatcttcaggagcagttttcttcagacgctttaagcttcctttttgttgatgtatttgctctttatttgttcttccaagacctttttaagatgtcaa 19832765  T
Q  104 a 104  Q
    |    
T  19832764 a 19832764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 13602447 - 13602525
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 89  Q
    ||||||||||| |||| |||| ||| |||||||||||||||||||||||| |||||||||| |||||||| ||||||||    
T  13602447 cttcaggagcacttctcttcaaacggtttaagcttcctttttgttgattccttttctctcttttgttcttccagaacct 13602525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 99
Target Start/End: Complemental strand, 139225 - 139136
Alignment:
Q  10 tcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatg 99  Q
    ||||||||||||||| | |||||||||||||||||| |||||||||||||| ||| |||| ||||||||||  |  ||||||||||||||    
T  139225 tcttcaggagcagttttcttcagacgctttaagctttctttttgttgattcctttgctctttattgttcttctaagacctttttaagatg 139136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 99
Target Start/End: Complemental strand, 147246 - 147157
Alignment:
Q  10 tcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatg 99  Q
    ||||||||||||||| | |||||||||||||||||| |||||||||||||| ||| |||| ||||||||||  |  ||||||||||||||    
T  147246 tcttcaggagcagttttcttcagacgctttaagctttctttttgttgattcctttgctctttattgttcttctaagacctttttaagatg 147157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 17381716 - 17381812
Alignment:
Q  5 ctttgtcttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctctattgttctttcagaacctttttaagatgt 100  Q
    |||| ||||||||||||||| | |||||||||||||||||| ||||||||||||||| | | |||| |||||||||| ||  |||||||||||||||    
T  17381716 ctttatcttcaggagcagttttcttcagacgctttaagcttccctttttgttgattcctatgctctttattgttcttccaagacctttttaagatgt 17381812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 19624244 - 19624332
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 89  Q
    ||||||||| ||||||||||| |||| |||||| |||| ||||||||||||||||||||| ||  |||||| |||||||| ||||||||    
T  19624244 agcactttgacttcaggagcacttctcttcagatgcttcaagcttcctttttgttgattccttagctctcttttgttcttccagaacct 19624332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 24117110 - 24117198
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 89  Q
    ||||||||| ||||||||||| |||| |||||| |||||||||||||||||||||||||| ||  |||||| |||||||| || |||||    
T  24117110 agcactttgacttcaggagcacttctcttcagatgctttaagcttcctttttgttgattccttagctctcttttgttcttccataacct 24117198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 11 - 104
Target Start/End: Original strand, 16877506 - 16877600
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttcc-tttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 104  Q
    |||||||||||||| | |||||||||||||||| ||| |||||||| |||| ||| |||| |||||||||| ||| ||||||||||||| |||||    
T  16877506 cttcaggagcagttttcttcagacgctttaagcctccctttttgttaattcctttgctctttattgttcttccaggacctttttaagatatcaaa 16877600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 130
Target Start/End: Original strand, 21618521 - 21618648
Alignment:
Q  5 ctttgtcttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtca 102  Q
    |||| ||||||||||||||| | |||||||||||||||||| |||||||||||||  |||| |||| || |||||||| ||  |||||||||||||||||    
T  21618521 ctttatcttcaggagcagttttcttcagacgctttaagcttccctttttgttgatgtatttgctctttatttgttcttccaagacctttttaagatgtca 21618620  T
Q  103 aannnnnnnctatggtcctgtacacttg 130  Q
    ||       |||| ||||||||||||||    
T  21618621 aacttttgtctatagtcctgtacacttg 21618648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 33351812 - 33351681
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagat 98  Q
    |||||||||||||||||||||||| | |||||||||||||||||| |||||||||||||  | || ||||||| |||||||| ||  |||  ||||||||    
T  33351812 agcactttgtcttcaggagcagttttcttcagacgctttaagcttccctttttgttgatgtacttgctctctatttgttcttccaagaccactttaagat 33351713  T
Q  99 gtcaaannnnnnnctatggtcctgtacacttg 130  Q
    ||||||       |||| ||||||||||||||    
T  33351712 gtcaaatttttatctatagtcctgtacacttg 33351681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 11 - 104
Target Start/End: Original strand, 12349254 - 12349349
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtcaaa 104  Q
    |||||||||||||| | |||||||||||||||||| |||||||||||||  |||| |||| || |||||||| ||  |||||||||||||||||||    
T  12349254 cttcaggagcagttttcttcagacgctttaagcttccctttttgttgatgtatttgctctttatttgttcttccaagacctttttaagatgtcaaa 12349349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 11 - 104
Target Start/End: Original strand, 12423514 - 12423609
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttc-ctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtcaaa 104  Q
    |||||||||||||| | ||||||||||||||||||| ||||||||||||  |||| |||| || |||||||| ||  |||||||||||||||||||    
T  12423514 cttcaggagcagttttcttcagacgctttaagcttcactttttgttgatgtatttgctctttatttgttcttccaagacctttttaagatgtcaaa 12423609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 11 - 104
Target Start/End: Complemental strand, 22058439 - 22058344
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtcaaa 104  Q
    ||||||||||| |||| |||||||||||||||||| |||||||||||||  |||| |||| || |||||||| ||  |||||||||||||||||||    
T  22058439 cttcaggagcaattctcttcagacgctttaagcttccctttttgttgatgtatttgctctttatttgttcttccaagacctttttaagatgtcaaa 22058344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 80
Target Start/End: Complemental strand, 12715297 - 12715223
Alignment:
Q  6 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctt 80  Q
    |||||||||||||||| |||| |||||| |||| ||||||||||||||||||||  ||| |||||| ||||||||    
T  12715297 tttgtcttcaggagcacttctcttcagatgcttcaagcttcctttttgttgatttctttgctctcttttgttctt 12715223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 80
Target Start/End: Original strand, 18378545 - 18378614
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctt 80  Q
    ||||||||||| |||| || ||||| |||||||||||||||||||||||| ||| |||||| ||||||||    
T  18378545 cttcaggagcacttctcttaagacgttttaagcttcctttttgttgattcctttactctcttttgttctt 18378614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 15302458 - 15302541
Alignment:
Q  6 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 89  Q
    |||||||||||||||| |||| ||||||||| ||||| |||| |||||||||||| ||| |||||| || |||||  |||||||    
T  15302458 tttgtcttcaggagcacttctcttcagacgccttaagtttccattttgttgattcctttgctctctttttttcttctagaacct 15302541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 104
Target Start/End: Complemental strand, 14100330 - 14100237
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 104  Q
    ||||||||| | |||| | |||| |||| |||||||||||||||||||||  || |||||| |||||||| |||||||| ||||| || |||||    
T  14100330 cttcaggagtacttctctccagatgcttcaagcttcctttttgttgattccattgctctcttttgttcttccagaacctatttaatatatcaaa 14100237  T

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Target: chr6; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 104
Target Start/End: Original strand, 16336440 - 16336540
Alignment:
Q  5 ctttgtcttcaggagcagttcttttcagacgctttaagcttc-ctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtca 102  Q
    |||| ||||||||||||||| | ||||||||||||||||||| ||||||||||||  |||| |||| || |||||||| ||  ||| |||||||||||||    
T  16336440 ctttatcttcaggagcagttttcttcagacgctttaagcttcactttttgttgatgtatttgctctttatttgttcttccaagacc-ttttaagatgtca 16336538  T
Q  103 aa 104  Q
    ||    
T  16336539 aa 16336540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 15987488 - 15987564
Alignment:
Q  13 tcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 89  Q
    ||||||||| || | |||||| |||| ||||||||||||||||||||| ||  |||||| ||||| |||||||||||    
T  15987488 tcaggagcacttttcttcagatgcttcaagcttcctttttgttgattccttagctctcttttgttttttcagaacct 15987564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 25597754 - 25597832
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 89  Q
    ||||||||||| |||| |||||| ||||| ||||||||||||||||||||  || |||||| || |||||  |||||||    
T  25597754 cttcaggagcacttctcttcagatgcttttagcttcctttttgttgattccattgctctcttttattcttctagaacct 25597832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 86
Target Start/End: Complemental strand, 19065882 - 19065805
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttc-ctttttgttgattcattttctctcta-ttgttctttcagaa 86  Q
    |||||||||||||| | ||||||||||| ||||||| ||||||||||||  | ||||||| || ||||||||||||||    
T  19065882 cttcaggagcagttttcttcagacgcttgaagcttctctttttgttgatatactttctctttatttgttctttcagaa 19065805  T

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Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 130
Target Start/End: Complemental strand, 20112567 - 20112452
Alignment:
Q  15 aggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnnncta 114  Q
    ||||||| |||| || ||| |||| |||||||||||||||||||||  |  | |||| |||||||| ||||||||  | ||||| |||||       |||    
T  20112567 aggagcacttctctttagatgcttcaagcttcctttttgttgattccatagccctctcttgttcttccagaacctaataaagatatcaaatttttgtcta 20112468  T
Q  115 tggtcctgtacacttg 130  Q
    ||||||||||||||||    
T  20112467 tggtcctgtacacttg 20112452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 17608160 - 17608107
Alignment:
Q  28 ttcagacgctttaagcttc-ctttttgttgattcattttctctctattgttctt 80  Q
    |||||| |||||| ||||| |||||||||||||||||| |||||| ||||||||    
T  17608160 ttcagatgctttaggcttctctttttgttgattcatttgctctcttttgttctt 17608107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 36 - 89
Target Start/End: Original strand, 18383955 - 18384008
Alignment:
Q  36 ctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 89  Q
    |||||| |||| ||||||||||||| ||| |||||| |||||||| ||||||||    
T  18383955 ctttaaacttcttttttgttgattcctttgctctcttttgttcttccagaacct 18384008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 11 - 60
Target Start/End: Original strand, 23284855 - 23284904
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattc 60  Q
    ||||||||||| |||| |||||| | || |||||||||||||||||||||    
T  23284855 cttcaggagcacttctcttcagatgtttcaagcttcctttttgttgattc 23284904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 84; Significance: 5e-40; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 18121499 - 18121396
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgt 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||| ||||||||||||||| |||||||||||||||||||    
T  18121499 agcactttgtcttcaggagcagttctcttcagacgctttaagcttcatttttgttgcttcatttgctctctattgttcttccagaacctttttaagatgt 18121400  T
Q  101 caaa 104  Q
    ||||    
T  18121399 caaa 18121396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 47207991 - 47208094
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgt 100  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||  |||||||||||||||    
T  47207991 agcactttgtcttcaggagcagttttcttcagacgctttaagcttcctttttgttgattcatttgctctctattgttcttccaatacctttttaagatgt 47208090  T
Q  101 caaa 104  Q
    ||||    
T  47208091 caaa 47208094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 28582388 - 28582517
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgt 100  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||  ||| ||||||||||||||| ||||||||||||||||| |    
T  28582388 agcactttgtcttcaggagcagttctcttcagacgttttaagcttcctttttgttgatttctttactctctattgttcttccagaacctttttaagattt 28582487  T
Q  101 caaannnnnnnctatggtcctgtacacttg 130  Q
    ||||       |||||||| ||||||||||    
T  28582488 caaatttttgtctatggtcatgtacacttg 28582517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 2561455 - 2561564
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgatt------cattttctctctattgttctttcagaaccttttta 94  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||      ||||| ||||||||||||||| |||||||||||||    
T  2561455 agcactttgtcttcaggagcagttctcttcagacgctttaagcttcctttttgttgattcatttgcatttgctctctattgttcttccagaaccttttta 2561554  T
Q  95 agatgtcaaa 104  Q
    ||||||||||    
T  2561555 agatgtcaaa 2561564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 31303670 - 31303799
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgt 100  Q
    ||||||||| ||||||||||| |||| |||||| |||||||||||||||||||||||||| ||| |||||| |||||||| ||||| || ||||||||||    
T  31303670 agcactttgacttcaggagcacttctcttcagatgctttaagcttcctttttgttgattcttttgctctcttttgttcttccagaaactatttaagatgt 31303769  T
Q  101 caaannnnnnnctatggtcctgtacacttg 130  Q
    ||||       |||||||| ||||||||||    
T  31303770 caaatttttgtctatggtcatgtacacttg 31303799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 11223828 - 11223931
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgt 100  Q
    |||||||||||||||||||||||||| |||||| ||||||| |||||||||||||||||| ||| |||| |||| ||||| ||  |||||||||||||||    
T  11223828 agcactttgtcttcaggagcagttctcttcagatgctttaaacttcctttttgttgattcctttgctctttattattcttccaagacctttttaagatgt 11223927  T
Q  101 caaa 104  Q
    ||||    
T  11223928 caaa 11223931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 100
Target Start/End: Complemental strand, 47405324 - 47405230
Alignment:
Q  6 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgt 100  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||  || ||||||||||||    
T  47405324 tttgtcttcaggagcagttttcttcagacgctttaagcttcctttttgttgattcctttgctctctattgttcttccaagacgtttttaagatgt 47405230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 104
Target Start/End: Original strand, 50300508 - 50300602
Alignment:
Q  10 tcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 104  Q
    |||||||||| |||| | ||||||||||||||||||||||||||||||||| ||| |||| |||||||||| || ||||||||||||||||||||    
T  50300508 tcttcaggagtagttttcttcagacgctttaagcttcctttttgttgattcctttgctctttattgttcttccaaaacctttttaagatgtcaaa 50300602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 8 - 104
Target Start/End: Original strand, 11869374 - 11869470
Alignment:
Q  8 tgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 104  Q
    ||||||||||||||||| | || |||||||||||||||||||||||||||||| ||| |||| |||||||||| ||  |||||||||||||||||||    
T  11869374 tgtcttcaggagcagttttctttagacgctttaagcttcctttttgttgattcctttgctctttattgttcttccaagacctttttaagatgtcaaa 11869470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 52920686 - 52920815
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgt 100  Q
    ||||||||  ||||||||||| |||| |||||| |||| ||||||||||||||||||||| ||  |||||| |||||||| |||||||||||||||||||    
T  52920686 agcacttttacttcaggagcacttctcttcagatgcttcaagcttcctttttgttgattccttagctctcttttgttcttccagaacctttttaagatgt 52920785  T
Q  101 caaannnnnnnctatggtcctgtacacttg 130  Q
    ||||       ||||| |||||||||||||    
T  52920786 caaatttttgtctatgatcctgtacacttg 52920815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 100
Target Start/End: Complemental strand, 20627347 - 20627258
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgt 100  Q
    |||||| ||||||| | ||||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||  |||||||||||||||    
T  20627347 cttcagaagcagttttgttcagacgctttaagcttcctttttgttgattcctttgctctctattgttcttccaagacctttttaagatgt 20627258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 53056606 - 53056502
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctctattgttctttcagaacctttttaagatg 99  Q
    |||||||||||||||||||||||| | |||| ||||||||||||| ||||||||||||||| ||| || | |||||||||| ||  ||||||||||||||    
T  53056606 agcactttgtcttcaggagcagttttcttcaaacgctttaagcttccctttttgttgattcctttgctttttattgttcttccaagacctttttaagatg 53056507  T
Q  100 tcaaa 104  Q
    |||||    
T  53056506 tcaaa 53056502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 104
Target Start/End: Original strand, 40800117 - 40800210
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 104  Q
    ||||||||||| || | ||||||||||||||||||||||||||||||||  ||| ||||||||| ||||| ||  |||||||||||||||||||    
T  40800117 cttcaggagcacttttcttcagacgctttaagcttcctttttgttgatttctttgctctctattattcttccaagacctttttaagatgtcaaa 40800210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 6091013 - 6091142
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgt 100  Q
    ||||||||  ||||||||||| |||| |||||| |||| ||||||| ||||||||||||   || |||||| |||||||| |||||||| ||||||||||    
T  6091013 agcactttaacttcaggagcacttctcttcagatgcttcaagcttcatttttgttgatttcattgctctcttttgttcttccagaacctatttaagatgt 6091112  T
Q  101 caaannnnnnnctatggtcctgtacacttg 130  Q
    ||||       |||||||||||||||||||    
T  6091113 caaatttttgtctatggtcctgtacacttg 6091142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 41495255 - 41495343
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 89  Q
    ||||||||| |||||| |||| |||| |||||| |||||||||||||||||||||||||| ||| |||||| |||||||| ||||||||    
T  41495255 agcactttgacttcagaagcacttctcttcagatgctttaagcttcctttttgttgattcctttgctctcttttgttcttccagaacct 41495343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 6 - 104
Target Start/End: Original strand, 14969600 - 14969698
Alignment:
Q  6 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 104  Q
    |||||||| ||||||  |||| |||||| |||| ||| ||||||||||||||||||||| |||||  |||||||| || ||||||||||||||||||||    
T  14969600 tttgtcttaaggagcgattctcttcagatgcttcaagattcctttttgttgattcatttgctctcgtttgttcttccataacctttttaagatgtcaaa 14969698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 101
Target Start/End: Original strand, 29855711 - 29855808
Alignment:
Q  5 ctttgtcttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtc 101  Q
    |||| ||||||||||||||| | |||||||||||||||||| ||||||||||||||| |||  ||| |||||||||| ||  ||||||||||||||||    
T  29855711 ctttatcttcaggagcagttttcttcagacgctttaagcttccctttttgttgattcctttgttctttattgttcttccaagacctttttaagatgtc 29855808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 130
Target Start/End: Complemental strand, 49553359 - 49553237
Alignment:
Q  10 tcttcaggagcagttctt-ttcagacgctttaagcttcctttttgttgattcattttctct-ctattgttctttcagaacctttttaagatgtcaaannn 107  Q
    |||||||||||| ||||  ||||||||||| ||||||||||||||||||||||||| |||| || |||||||| |||||| | ||||||||||||||       
T  49553359 tcttcaggagcacttctacttcagacgcttcaagcttcctttttgttgattcatttgctctcctgttgttcttccagaacttatttaagatgtcaaattt 49553260  T
Q  108 nnnnctatggtcctgtacacttg 130  Q
        |||||||| ||||||||||    
T  49553259 ttgtctatggtcatgtacacttg 49553237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 131 - 215
Target Start/End: Original strand, 25631909 - 25631993
Alignment:
Q  131 ttcattattttgcttttgatctctgcattatactcaacattgaatttgcagtgtagaatagtgaaggtggttgctacctgctggt 215  Q
    ||||| |||||||||||  ||||||||||||||||||||| ||||||||||||||||||| | | ||| ||||||||||| ||||    
T  25631909 ttcatgattttgcttttactctctgcattatactcaacatcgaatttgcagtgtagaataataacggtcgttgctacctggtggt 25631993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 17238822 - 17238744
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 89  Q
    ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||  |||||| ||||||||  |||||||    
T  17238822 cttcaggagcacttctcttcagacgctttaagcttcctttttgttgattccttagctctcttttgttcttaaagaacct 17238744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 20646438 - 20646524
Alignment:
Q  3 cactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 89  Q
    ||||||| ||||||||||| |||| |||| ||||||||||||||| |||||||||||| ||| |||||| ||||||||  |||||||    
T  20646438 cactttgacttcaggagcacttctcttcaaacgctttaagcttccattttgttgattcctttgctctcttttgttcttctagaacct 20646524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 103
Target Start/End: Original strand, 33583552 - 33583645
Alignment:
Q  10 tcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 103  Q
    ||||||||||||||| | |||| | | ||||| |||||||||||||||||| ||| |||| |||||||||| ||  ||||||||||||||||||    
T  33583552 tcttcaggagcagttttcttcatatgttttaaacttcctttttgttgattcctttgctctttattgttcttccaagacctttttaagatgtcaa 33583645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 103
Target Start/End: Original strand, 33598172 - 33598265
Alignment:
Q  10 tcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 103  Q
    ||||||||||||||| | |||| | | ||||| |||||||||||||||||| ||| |||| |||||||||| ||  ||||||||||||||||||    
T  33598172 tcttcaggagcagttttcttcatatgttttaaacttcctttttgttgattcctttgctctttattgttcttccaagacctttttaagatgtcaa 33598265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 13948617 - 13948705
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 89  Q
    |||| |||| ||||| ||||| |||| |||||| |||||||||||||||||||||||||| ||| |||||| ||||| || ||||||||    
T  13948617 agcattttgacttcaagagcacttctcttcagatgctttaagcttcctttttgttgattcctttgctctcttttgtttttccagaacct 13948705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 14392884 - 14392755
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgt 100  Q
    ||||||||  ||||||||||| |||| |||||| |||| ||||||||||| ||||||||| ||  |||||| |||||||| ||||||||  | ||||| |    
T  14392884 agcactttaacttcaggagcacttctcttcagatgcttcaagcttcctttctgttgattccttagctctcttttgttcttccagaacctaataaagatat 14392785  T
Q  101 caaannnnnnnctatggtcctgtacacttg 130  Q
    ||||       |||||||||||||||||||    
T  14392784 caaatttttgtctatggtcctgtacacttg 14392755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 15903480 - 15903568
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 89  Q
    ||||||||| ||| ||||||| |||| |||||| |||| |||||||||||||||||||||  || |||||| |||||||| ||||||||    
T  15903480 agcactttgacttaaggagcacttctcttcagatgcttcaagcttcctttttgttgattccattgctctcttttgttcttccagaacct 15903568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 10 - 104
Target Start/End: Complemental strand, 38177558 - 38177464
Alignment:
Q  10 tcttcaggagcagttctt-ttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 104  Q
    |||||||||||| ||||  |||||| | || ||||||||||||||||||||||||| |||| | || ||||| |||||||||||||||||||||||    
T  38177558 tcttcaggagcacttctcattcagatgtttcaagcttcctttttgttgattcatttgctct-tttttttcttccagaacctttttaagatgtcaaa 38177464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 49642647 - 49642569
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 89  Q
    ||||||||||| |||| |||||| |||| |||||||||||||||||||||  || |||||| |||||||| ||||||||    
T  49642647 cttcaggagcacttctcttcagatgcttcaagcttcctttttgttgattccattgctctcttttgttcttccagaacct 49642569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 104
Target Start/End: Original strand, 2785381 - 2785482
Alignment:
Q  5 ctttgtcttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtca 102  Q
    |||| ||||||||| ||||| | |||||||||||||||||| |||||||||||||  |||| |||| || |||||||| ||  |||||||||||||||||    
T  2785381 ctttatcttcaggaacagttttcttcagacgctttaagcttccctttttgttgatgtatttgctctttatttgttcttccaagacctttttaagatgtca 2785480  T
Q  103 aa 104  Q
    ||    
T  2785481 aa 2785482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 104
Target Start/End: Original strand, 5216272 - 5216373
Alignment:
Q  5 ctttgtcttcaggagcagttcttttcagacgctttaagc-ttcctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtca 102  Q
    |||| ||||||||||||||| | |||||| ||||||||| |||||||||||||||  |||| |||| || |||||||| ||  |||||||||||||||||    
T  5216272 ctttatcttcaggagcagttttcttcagaagctttaagctttcctttttgttgatgtatttgctctttatttgttcttccaagacctttttaagatgtca 5216371  T
Q  103 aa 104  Q
    ||    
T  5216372 aa 5216373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 104
Target Start/End: Original strand, 14955743 - 14955843
Alignment:
Q  5 ctttgtcttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 103  Q
    |||| ||| ||||||||||| | |||||||||||||||||| |||||||||| |||  ||| |||| |||||||||| ||  ||||||||||||| ||||    
T  14955743 ctttatctgcaggagcagttttcttcagacgctttaagcttccctttttgttaatttctttgctctttattgttcttccaagacctttttaagatatcaa 14955842  T
Q  104 a 104  Q
    |    
T  14955843 a 14955843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 37467587 - 37467671
Alignment:
Q  5 ctttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 89  Q
    ||||| ||||||||||| || | |||||| |||| |||||||||||||||||||||  ||  ||||| |||||||||||||||||    
T  37467587 ctttgacttcaggagcacttatcttcagatgcttcaagcttcctttttgttgattccattgttctcttttgttctttcagaacct 37467671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 5 - 104
Target Start/End: Complemental strand, 24775375 - 24775273
Alignment:
Q  5 ctttgtcttcaggagcagttcttttcagacgctttaagcttcc-tttttgttgattcattttctct--ctattgttctttcagaacctttttaagatgtc 101  Q
    |||| |||||||||||| || | |||| ||||||||||||||| ||||||||||||| ||| ||||  || |||||||| ||| ||||||||||||| ||    
T  24775375 ctttatcttcaggagcatttttcttcaaacgctttaagcttccatttttgttgattcctttgctcttacttttgttcttccagtacctttttaagatatc 24775276  T
Q  102 aaa 104  Q
    |||    
T  24775275 aaa 24775273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 104
Target Start/End: Complemental strand, 12726131 - 12726038
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 104  Q
    ||||||||||| |||| || |||  ||| ||||||||||||| ||||||| ||   ||||| |||||||| |||||||| ||||||||||||||    
T  12726131 cttcaggagcaattctctttagatccttcaagcttcctttttattgattctttagatctcttttgttcttccagaacctatttaagatgtcaaa 12726038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 12962979 - 12962891
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 89  Q
    ||||||||| |||||  |||| |||| ||||||||||| ||||||||||||||||||||| ||    |||| |||||||| ||||||||    
T  12962979 agcactttgacttcaatagcacttctcttcagacgcttcaagcttcctttttgttgattccttagtcctcttttgttcttccagaacct 12962891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 50
Target Start/End: Complemental strand, 16658519 - 16658475
Alignment:
Q  6 tttgtcttcaggagcagttcttttcagacgctttaagcttccttt 50  Q
    |||||||||||||||| |||| |||||||||||||||||||||||    
T  16658519 tttgtcttcaggagcacttctcttcagacgctttaagcttccttt 16658475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 104
Target Start/End: Original strand, 40851252 - 40851347
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtcaaa 104  Q
    |||||||||||||| | |||||||||||||||||| |||||||||||||  | || |||| || |||||||||||  |||  ||||||||||||||    
T  40851252 cttcaggagcagttttcttcagacgctttaagcttccctttttgttgatgtacttgctctttatttgttctttcaagaccaatttaagatgtcaaa 40851347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 13824313 - 13824406
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgc--tttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttt 92  Q
    ||||||||  ||||||||||| |||| |||||  ||  || |||||||||||||||||||||  || |||||| |||||||| |||||||||||    
T  13824313 agcacttttacttcaggagcacttctcttcaggagcacttcaagcttcctttttgttgattccattgctctcttttgttcttccagaacctttt 13824406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 80
Target Start/End: Original strand, 22141034 - 22141104
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctctattgttctt 80  Q
    |||||||||||||| | ||||||| |||||||||| ||||||||||||||| ||| ||||  |||||||||    
T  22141034 cttcaggagcagttttcttcagacactttaagcttccctttttgttgattcctttgctcttaattgttctt 22141104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 58
Target Start/End: Original strand, 2028576 - 2028624
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagctt-cctttttgttgat 58  Q
    |||||||||||||| | |||||||||||||||||| |||||||||||||    
T  2028576 cttcaggagcagttttcttcagacgctttaagcttccctttttgttgat 2028624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 58
Target Start/End: Original strand, 21606325 - 21606373
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagctt-cctttttgttgat 58  Q
    |||||||||||||| | |||||||||||||||||| |||||||||||||    
T  21606325 cttcaggagcagttttcttcagacgctttaagcttccctttttgttgat 21606373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 104
Target Start/End: Complemental strand, 21605514 - 21605417
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttcc---tttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtcaaa 104  Q
    |||||||||||||| | |||||||||||||||||| |   |||||||||||  |||| |||| || |||||| | ||  |||||||||||||||||||    
T  21605514 cttcaggagcagttttcttcagacgctttaagctttcctttttttgttgatgtatttgctctttatttgttcatccaagacctttttaagatgtcaaa 21605417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 104
Target Start/End: Complemental strand, 21636530 - 21636433
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttcc---tttttgttgattcattttctctctat-tgttctttcagaacctttttaagatgtcaaa 104  Q
    ||||| |||||||| | ||||||||||||||||||||   |||||||||||  |||| |||| ||| |||||||  |  |||||||||||||||||||    
T  21636530 cttcacgagcagttttcttcagacgctttaagcttccctttttttgttgatgtatttgctctttatatgttcttctaagacctttttaagatgtcaaa 21636433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 1727904 - 1727858
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcc 47  Q
    ||||||||||||||||||||| || | ||||||| ||||||||||||    
T  1727904 agcactttgtcttcaggagcacttttcttcagacactttaagcttcc 1727858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 22803969 - 22803891
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 89  Q
    ||||||||||| |||| |||| | | || |||||||||||||||||||||  || |||||| ||||||||  |||||||    
T  22803969 cttcaggagcacttctcttcaaatgtttcaagcttcctttttgttgattccattgctctcttttgttcttctagaacct 22803891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 100
Target Start/End: Complemental strand, 46349672 - 46349606
Alignment:
Q  35 gctttaagcttcc-tttttgttgattcattttctctctattgttctttcagaacctttttaagatgt 100  Q
    ||||||||||||| ||||||||||||| ||| |||| |||||||||| ||  ||||||||| |||||    
T  46349672 gctttaagcttccctttttgttgattcctttgctctttattgttcttccaagacctttttaggatgt 46349606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 46796254 - 46796196
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagctt-cctttttgttgat 58  Q
    ||||||||  |||||||||||||| | ||||||| |||||||||| |||||||||||||    
T  46796254 agcactttaacttcaggagcagttttcttcagacactttaagcttccctttttgttgat 46796196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 104
Target Start/End: Complemental strand, 49666265 - 49666171
Alignment:
Q  12 ttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtcaaa 104  Q
    |||| |||||||| | |||||||||||||||||| |||||||||||||  | || |||| || |||||||| ||  ||| |||||||||||||||    
T  49666265 ttcaagagcagttttcttcagacgctttaagcttccctttttgttgatgtaattgctctttatttgttcttccaagaccattttaagatgtcaaa 49666171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 18142659 - 18142619
Alignment:
Q  3 cactttgtcttcaggagcagttcttttcagacgctttaagc 43  Q
    |||||||||||||||||||||| | |||| |||||||||||    
T  18142659 cactttgtcttcaggagcagttttcttcaaacgctttaagc 18142619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 80; Significance: 1e-37; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 13575980 - 13575877
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgt 100  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||  |||||||||||||||    
T  13575980 agcactttgtcttcaggagcagttttcttcagacgctttaagcttcctttttgttgattcatttgctctctattgttcttccaagacctttttaagatgt 13575881  T
Q  101 caaa 104  Q
    ||||    
T  13575880 caaa 13575877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 10073198 - 10073301
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgt 100  Q
    ||||||||||||||||||||| || | ||||||||||||||||||||||||||||||||| ||| ||||||||||||||| || ||||||||||||||||    
T  10073198 agcactttgtcttcaggagcacttttcttcagacgctttaagcttcctttttgttgattcctttgctctctattgttcttccataacctttttaagatgt 10073297  T
Q  101 caaa 104  Q
    ||||    
T  10073298 caaa 10073301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 11 - 130
Target Start/End: Complemental strand, 37435347 - 37435228
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnn 110  Q
    ||||||||||| |||| |||||| |||| ||||||||||||||||||||||||| |||||| |||||||| |||||||| ||||||||||||||          
T  37435347 cttcaggagcacttctcttcagatgcttcaagcttcctttttgttgattcatttgctctcttttgttcttccagaacctatttaagatgtcaaatttttg 37435248  T
Q  111 nctatggtcctgtacacttg 130  Q
     |||||||||||||||||||    
T  37435247 tctatggtcctgtacacttg 37435228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 3395901 - 3395989
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 89  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| ||| |||||| |||||||| ||||||||    
T  3395901 agcactttgacttcaggagcagttctcttcagacgctttaagcttcctttttgttgattcctttgctctcttttgttcttccagaacct 3395989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 14604743 - 14604640
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgt 100  Q
    ||||||||| ||||||||||| |||| |||||||| || ||||||||||||||||||||| ||  |||||| |||||||| |||||||||||||||||||    
T  14604743 agcactttgacttcaggagcacttctcttcagacgtttcaagcttcctttttgttgattccttagctctcttttgttcttccagaacctttttaagatgt 14604644  T
Q  101 caaa 104  Q
    ||||    
T  14604643 caaa 14604640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 6 - 130
Target Start/End: Original strand, 45833676 - 45833800
Alignment:
Q  6 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaan 105  Q
    |||||||||||||||  ||||||||||| |||| ||||||||||||||||||||| ||| |||||| |||||||| || ||||||||||||||||||||     
T  45833676 tttgtcttcaggagcgcttcttttcagatgcttcaagcttcctttttgttgattcgtttgctctcttttgttcttccaaaacctttttaagatgtcaaat 45833775  T
Q  106 nnnnnnctatggtcctgtacacttg 130  Q
          |||||||| ||||||||||    
T  45833776 ttttgtctatggtcatgtacacttg 45833800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 54680173 - 54680276
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgt 100  Q
    ||||||||||||||||||||| || | ||||||||||||||||||||||||||||||||| ||| |||| |||||||||| ||  ||||||||||||||     
T  54680173 agcactttgtcttcaggagcaattttcttcagacgctttaagcttcctttttgttgattcctttgctctttattgttcttccaagacctttttaagatga 54680272  T
Q  101 caaa 104  Q
    ||||    
T  54680273 caaa 54680276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 20 - 104
Target Start/End: Original strand, 3497928 - 3498012
Alignment:
Q  20 cagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 104  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||| |||| |||||||||| || ||||||||||||||||||||    
T  3497928 cagttctcttcagacgctttaagcttcctttttgttgattcctttgctctatattgttcttccaaaacctttttaagatgtcaaa 3498012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 56034834 - 56034963
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgt 100  Q
    ||||||||  |||||||| || || | ||||||||||| |||||| |||||||||||||||||| |||||| |||||||| |||||||||||||||||||    
T  56034834 agcacttttacttcaggatcacttttcttcagacgcttcaagctttctttttgttgattcatttgctctcttttgttcttccagaacctttttaagatgt 56034933  T
Q  101 caaannnnnnnctatggtcctgtacacttg 130  Q
    ||||       |||||||| ||||||||||    
T  56034934 caaatttttgtctatggtcatgtacacttg 56034963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 29121649 - 29121753
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcc-tttttgttgattcattttctctctattgttctttcagaacctttttaagatg 99  Q
    ||||||||||||||||| |||||| | |||||||| ||||||||||| ||||||||||||| ||| |||| |||||||||| ||  ||||||||||||||    
T  29121649 agcactttgtcttcaggtgcagttttcttcagacgttttaagcttccctttttgttgattcctttgctctttattgttcttccaagacctttttaagatg 29121748  T
Q  100 tcaaa 104  Q
    |||||    
T  29121749 tcaaa 29121753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 19884964 - 19885095
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctt--tttgttgattcattttctctctattgttctttcagaacctttttaagat 98  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||  |||||||||||  || ||||||||| ||||| ||  ||| |||||||||    
T  19884964 agcactttgtcttcaggagcagttttcttcagacgctttaagcttccttggtttgttgattccattgctctctattattcttccaagaccattttaagat 19885063  T
Q  99 gtcaaannnnnnnctatggtcctgtacacttg 130  Q
    ||||||       |||| ||||||||||||||    
T  19885064 gtcaaatttttgtctatagtcctgtacacttg 19885095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 130
Target Start/End: Complemental strand, 19620926 - 19620799
Alignment:
Q  3 cactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtca 102  Q
    ||||||| |||||||||||  ||| |||||| |||||||||||||||||||||||||| ||| |||||| |||||||| ||||||||  | ||||| |||    
T  19620926 cactttgacttcaggagcacgtctcttcagatgctttaagcttcctttttgttgattcctttgctctcttttgttcttccagaacctaataaagatatca 19620827  T
Q  103 aannnnnnnctatggtcctgtacacttg 130  Q
    ||       |||||||||||||||||||    
T  19620826 aatttttgtctatggtcctgtacacttg 19620799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 104
Target Start/End: Original strand, 3793376 - 3793469
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 104  Q
    |||||||||||||| | ||||||| |||||||||| |||||||||||||| ||| |||| |||||||||| ||  |||||||||||||||||||    
T  3793376 cttcaggagcagttttcttcagacactttaagctttctttttgttgattcctttgctctttattgttcttccaagacctttttaagatgtcaaa 3793469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 9141143 - 9141226
Alignment:
Q  6 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 89  Q
    |||||||||||||||| |||| ||||||||| ||||||||||||||||||||||| ||| |||||| |||||||| || |||||    
T  9141143 tttgtcttcaggagcacttctcttcagacgccttaagcttcctttttgttgattcctttgctctcttttgttcttccataacct 9141226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 22675386 - 22675283
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgt 100  Q
    ||||||||||||| ||||| |||| | ||||||||||||||| |||  |||||||||||| ||| ||||||||||||||| ||  |||| ||||||||||    
T  22675386 agcactttgtctttaggagaagttttcttcagacgctttaagattcaattttgttgattcctttgctctctattgttcttccaagacctctttaagatgt 22675287  T
Q  101 caaa 104  Q
    ||||    
T  22675286 caaa 22675283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 5 - 104
Target Start/End: Original strand, 55732074 - 55732173
Alignment:
Q  5 ctttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 104  Q
    |||| ||||||||||||||| | |||||||||||||||||||| |||||||||||  ||| |||| |||||||||| ||  ||||||||||||| |||||    
T  55732074 ctttatcttcaggagcagttttcttcagacgctttaagcttcccttttgttgatttctttgctctttattgttcttccaagacctttttaagatatcaaa 55732173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 14904146 - 14904067
Alignment:
Q  10 tcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 89  Q
    ||||||| || |||||| ||||||||||||||||||| |||||||| |||||||| |||||| |||||||| ||||||||    
T  14904146 tcttcagaaggagttctcttcagacgctttaagcttcttttttgtttattcatttgctctcttttgttcttccagaacct 14904067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 11 - 130
Target Start/End: Complemental strand, 12811020 - 12810901
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnn 110  Q
    |||||| |||| ||||  ||||| |||  |||||||||||||||||||||  || |||||| |||||||| |||||||| ||||||||||||||          
T  12811020 cttcagaagcacttctgctcagatgctacaagcttcctttttgttgattccattgctctcttttgttcttccagaacctatttaagatgtcaaatttttg 12810921  T
Q  111 nctatggtcctgtacacttg 130  Q
     |||||||||||||||||||    
T  12810920 tctatggtcctgtacacttg 12810901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 11 - 104
Target Start/End: Original strand, 16853765 - 16853858
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 104  Q
    |||||||||||| | | ||||||||||||||||||||||||||||||||| ||| ||||  |||||||||  |  ||||||||||||| |||||    
T  16853765 cttcaggagcagatttcttcagacgctttaagcttcctttttgttgattcctttgctcttaattgttcttcaaagacctttttaagatatcaaa 16853858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 11 - 88
Target Start/End: Original strand, 55380528 - 55380605
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacc 88  Q
    ||||||||||| |||| ||||||||||| ||||||||||||||||||||| ||  |||||| ||||| ||||||||||    
T  55380528 cttcaggagcacttctcttcagacgcttcaagcttcctttttgttgattccttagctctcttttgttttttcagaacc 55380605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 12601381 - 12601464
Alignment:
Q  6 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 89  Q
    |||||||| |||| || |||| |||||| || ||||||||||||||||||||||| ||| |||||| |||||||| ||||||||    
T  12601381 tttgtcttaaggaacacttctcttcagatgccttaagcttcctttttgttgattcctttgctctcttttgttcttccagaacct 12601464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 104
Target Start/End: Original strand, 6517766 - 6517868
Alignment:
Q  5 ctttgtcttcaggagcagttctt-ttcagacgctttaagctt-cctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtc 101  Q
    |||| ||||||||||||||| || |||||||||||||||||| |||||||||||||  |||| |||| || |||||||| ||  ||||||||||||||||    
T  6517766 ctttatcttcaggagcagtttttcttcagacgctttaagcttccctttttgttgatgtatttgctctttatttgttcttccaagacctttttaagatgtc 6517865  T
Q  102 aaa 104  Q
    |||    
T  6517866 aaa 6517868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 8105950 - 8106023
Alignment:
Q  5 ctttgtcttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctctattgtt 77  Q
    |||| ||||||||||||||| | |||||||||||||||||| ||||||||||||||| ||| |||| |||||||    
T  8105950 ctttatcttcaggagcagttttcttcagacgctttaagcttccctttttgttgattcctttgctctttattgtt 8106023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 16632714 - 16632802
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 89  Q
    ||||||||| ||| ||||||| |||| |||||| |||| |||||||||||||||||||||  || |||||| ||||| || ||||||||    
T  16632714 agcactttgactttaggagcacttctcttcagatgcttcaagcttcctttttgttgattccattgctctcttttgtttttccagaacct 16632802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 104
Target Start/End: Original strand, 17247539 - 17247639
Alignment:
Q  5 ctttgtcttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 103  Q
    |||||||||||||||||||| | |  |||| |||||||||| ||||||||||||||| ||| |||| | |||||||| ||  ||||||||| ||||||||    
T  17247539 ctttgtcttcaggagcagttttctggagacactttaagctttcctttttgttgattcctttgctctttgttgttcttccaagacctttttaggatgtcaa 17247638  T
Q  104 a 104  Q
    |    
T  17247639 a 17247639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 29680394 - 29680306
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 89  Q
    ||||||||| |||||||| || |||| ||||||  ||| ||||||||||||||||||||| ||| |||||| ||||||||  |||||||    
T  29680394 agcactttgacttcaggaacacttctcttcagatacttcaagcttcctttttgttgattcctttgctctcttttgttcttctagaacct 29680306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 3105288 - 3105157
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagat 98  Q
    ||||| |||||||||||||||||| | ||||||| |||||||||| |||||||||||||  | || |||| || |||||||| || ||||  ||||||||    
T  3105288 agcaccttgtcttcaggagcagttttcttcagacactttaagcttccctttttgttgatgtacttgctctttatttgttcttccaaaaccaatttaagat 3105189  T
Q  99 gtcaaannnnnnnctatggtcctgtacacttg 130  Q
    ||||||       |||| ||||||||||||||    
T  3105188 gtcaaatttttgtctatagtcctgtacacttg 3105157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 104
Target Start/End: Complemental strand, 25650966 - 25650872
Alignment:
Q  12 ttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtcaaa 104  Q
    ||||||||||||| | |||||||||||||||||| |||||||||||||  |||| |||| || |||||||| ||  ||||| |||||||||||||    
T  25650966 ttcaggagcagttttcttcagacgctttaagcttccctttttgttgatgtatttgctctttatttgttcttccaataccttcttaagatgtcaaa 25650872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 16940237 - 16940346
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttccttttt-----gttgattcattttctctctatt-gttctttcagaaccttttta 94  Q
    ||||||||  |||||||||||||| | |||||||||||||||||||||||||     ||||||  |||| |||| |||| |||||| ||  |||||||||    
T  16940237 agcactttaacttcaggagcagttttcttcagacgctttaagcttccttttttttttgttgatgtatttgctctttatttgttcttccaagaccttttta 16940336  T
Q  95 agatgtcaaa 104  Q
    ||||||||||    
T  16940337 agatgtcaaa 16940346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 104
Target Start/End: Original strand, 10693137 - 10693233
Alignment:
Q  10 tcttcaggagcagttcttttcagacgctttaagcttcc-tttttgttgattcattttctctctattgttctttc-agaacctttttaagatgtcaaa 104  Q
    |||||| |||| ||| | |||| ||||||||||||||| ||||||||||||| ||| |||| ||||||| || | ||| | ||||||||||||||||    
T  10693137 tcttcatgagctgttttcttcaaacgctttaagcttccctttttgttgattcctttgctctttattgtttttccaagaccttttttaagatgtcaaa 10693233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 104
Target Start/End: Original strand, 10906903 - 10906999
Alignment:
Q  10 tcttcaggagcagttcttttcagacgctttaagcttcc-tttttgttgattcattttctctctattgttctttc-agaacctttttaagatgtcaaa 104  Q
    |||||| |||| ||| | |||| ||||||||||||||| ||||||||||||| ||| |||| ||||||| || | ||| | ||||||||||||||||    
T  10906903 tcttcatgagctgttttcttcaaacgctttaagcttccctttttgttgattcctttgctctttattgtttttccaagaccttttttaagatgtcaaa 10906999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 58
Target Start/End: Original strand, 14571312 - 14571360
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagctt-cctttttgttgat 58  Q
    |||||||||||||| | |||||||||||||||||| |||||||||||||    
T  14571312 cttcaggagcagttttcttcagacgctttaagcttccctttttgttgat 14571360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 58
Target Start/End: Original strand, 22191126 - 22191174
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagctt-cctttttgttgat 58  Q
    |||||||||||||| | |||||||||||||||||| |||||||||||||    
T  22191126 cttcaggagcagttttcttcagacgctttaagcttccctttttgttgat 22191174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 130
Target Start/End: Complemental strand, 14153811 - 14153685
Alignment:
Q  6 tttgtcttcaggagcagttctt-ttcaga--cgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtca 102  Q
    |||||||||||||||||||||| ||||||  |||||||||||||| ||| |||| ||| ||  |||||| |||| |  ||||||||| |||||||||| |    
T  14153811 tttgtcttcaggagcagttcttcttcagaagcgctttaagcttcc-tttcgttgtttccttagctctcttttgtccaatcagaacctctttaagatgtta 14153713  T
Q  103 aannnnnnnctatggtcctgtacacttg 130  Q
    ||       ||||||||||||| |||||    
T  14153712 aatttttgtctatggtcctgtatacttg 14153685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 40846368 - 40846447
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctcta-ttgttctttcagaacct 89  Q
    ||||||||||| || | |||||| |||| |||||||||||||||||||||  |  ||||| | |||||||||||||||||    
T  40846368 cttcaggagcacttttcttcagatgcttcaagcttcctttttgttgattccataactctcaatttgttctttcagaacct 40846447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 104
Target Start/End: Original strand, 413283 - 413387
Alignment:
Q  5 ctttgtcttcaggagcagttcttttcagacgctttaag------cttcctttttgttgattcattttctctctattgttctttcagaacctttttaagat 98  Q
    |||||||||||||||||||| | |||||||||||||||       ||  ||||||||||||| ||| |||| |||||||||| ||  |||||||||| ||    
T  413283 ctttgtcttcaggagcagttttcttcagacgctttaagttttttttttttttttgttgattcctttgctctttattgttcttccaagacctttttaa-at 413381  T
Q  99 gtcaaa 104  Q
    ||||||    
T  413382 gtcaaa 413387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 80
Target Start/End: Original strand, 14833673 - 14833747
Alignment:
Q  6 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctt 80  Q
    |||||||||||||||| |||  |||||| |||| ||| || |||||||||||||  ||| |||||| ||||||||    
T  14833673 tttgtcttcaggagcacttcgcttcagatgcttcaagttttctttttgttgatttctttgctctcttttgttctt 14833747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 104
Target Start/End: Complemental strand, 39419564 - 39419471
Alignment:
Q  13 tcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtcaaa 104  Q
    |||||||||||| | ||||||||||| |||||| ||||||||||||   | || |||| || |||||||||||| |||  ||||||||||||||    
T  39419564 tcaggagcagttttcttcagacgcttgaagcttccctttttgttgaaatacttgctctttatttgttctttcaggaccaatttaagatgtcaaa 39419471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 11 - 52
Target Start/End: Original strand, 40860961 - 40861002
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttccttttt 52  Q
    |||||||||||||| | |||||||||||||||||||| ||||    
T  40860961 cttcaggagcagttttcttcagacgctttaagcttccctttt 40861002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 80; Significance: 1e-37; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 2 - 130
Target Start/End: Complemental strand, 32785750 - 32785622
Alignment:
Q  2 gcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtc 101  Q
    |||||||| |||||||||||||| | ||||||||||||||||||||||||||||||||||||| || |||||||||||| ||||||||||||||||||||    
T  32785750 gcactttgccttcaggagcagttttcttcagacgctttaagcttcctttttgttgattcatttgctttctattgttcttccagaacctttttaagatgtc 32785651  T
Q  102 aaannnnnnnctatggtcctgtacacttg 130  Q
    |||       ||||||||||||| |||||    
T  32785650 aaatttttgtctatggtcctgtatacttg 32785622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 6 - 130
Target Start/End: Complemental strand, 22599975 - 22599851
Alignment:
Q  6 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaan 105  Q
    |||||||||||||||  |||| |||||| |||| ||||||||||||||||||||||||| |||||| |||||||| || ||||||||||||||||||||     
T  22599975 tttgtcttcaggagcgcttctcttcagatgcttcaagcttcctttttgttgattcatttgctctcttttgttcttccaaaacctttttaagatgtcaaat 22599876  T
Q  106 nnnnnnctatggtcctgtacacttg 130  Q
          |||||||||||||||||||    
T  22599875 ttttgtctatggtcctgtacacttg 22599851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 6 - 130
Target Start/End: Original strand, 36134460 - 36134584
Alignment:
Q  6 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaan 105  Q
    |||||||||||||||  |||| |||||| |||| ||||||||||||||||||||| ||| |||||| |||||||| |||||||||||||||||||||||     
T  36134460 tttgtcttcaggagcgcttctcttcagatgcttcaagcttcctttttgttgattcctttgctctcttttgttcttccagaacctttttaagatgtcaaat 36134559  T
Q  106 nnnnnnctatggtcctgtacacttg 130  Q
          |||||||||||||||||||    
T  36134560 ttttgtctatggtcctgtacacttg 36134584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 1900614 - 1900702
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 89  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| ||| |||||| |||||||| ||||||||    
T  1900614 agcactttgtcttcaggagcagttctcttcagacgttttaagcttcctttttgttgattcctttgctctcttttgttcttccagaacct 1900702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 22154155 - 22154284
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgt 100  Q
    |||||| || ||||||||||| |||| ||||||||||| ||||||| ||||||||||||||||| |||||| |||||||| |||||||| ||||||||||    
T  22154155 agcactgtgacttcaggagcacttctcttcagacgcttcaagcttcatttttgttgattcatttgctctcttttgttcttccagaacctatttaagatgt 22154254  T
Q  101 caaannnnnnnctatggtcctgtacacttg 130  Q
    ||||       |||||||| ||||||||||    
T  22154255 caaatttttgtctatggtcatgtacacttg 22154284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 22427157 - 22427028
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgt 100  Q
    ||||||| |||||| ||||||||| | ||||||| |||||||||| |||||||||||||| ||| ||||||||||||||||||  |||||||||||||||    
T  22427157 agcacttggtcttcgggagcagttttcttcagacactttaagctttctttttgttgattcctttgctctctattgttctttcaagacctttttaagatgt 22427058  T
Q  101 caaannnnnnnctatggtcctgtacacttg 130  Q
    ||||       | |||||||||||||||||    
T  22427057 caaatttttgtcaatggtcctgtacacttg 22427028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 8 - 130
Target Start/End: Complemental strand, 16235103 - 16234981
Alignment:
Q  8 tgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannn 107  Q
    |||||||||||||| ||||||||||| |||| |||||||||||||||||||||  || |||||| |||||||| |||||||||||||| ||| ||||       
T  16235103 tgtcttcaggagcacttcttttcagatgcttcaagcttcctttttgttgattccattgctctcttttgttcttccagaacctttttaatatgacaaattt 16235004  T
Q  108 nnnnctatggtcctgtacacttg 130  Q
        |||||||||||||||||||    
T  16235003 ttgtctatggtcctgtacacttg 16234981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 6 - 104
Target Start/End: Original strand, 29216069 - 29216167
Alignment:
Q  6 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 104  Q
    ||||||||||||| ||||| | ||||||||||||||||||||||||||||||||| |||  |||||||||||||| ||  ||||||||| |||||||||    
T  29216069 tttgtcttcaggaacagttttcttcagacgctttaagcttcctttttgttgattcttttgatctctattgttcttccaagacctttttaggatgtcaaa 29216167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 5 - 104
Target Start/End: Original strand, 2834975 - 2835075
Alignment:
Q  5 ctttgtcttcaggagcagttcttttcagacgctttaagcttcc-tttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 103  Q
    ||||||||||||||||| || | |||| ||||||||||||||| ||||||||||||| ||| |||| |||||||||| || |||||||||||||||||||    
T  2834975 ctttgtcttcaggagcaattttcttcaaacgctttaagcttccctttttgttgattcctttgctctttattgttcttccaaaacctttttaagatgtcaa 2835074  T
Q  104 a 104  Q
    |    
T  2835075 a 2835075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 5 - 104
Target Start/End: Complemental strand, 25448328 - 25448228
Alignment:
Q  5 ctttgtcttcaggagcagttcttttcagacgctttaagcttcc-tttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 103  Q
    |||| ||||||||||||||| | |||||||||||||||||||| ||||||||||||| ||| ||||||||||||||| ||  ||||||||||||| ||||    
T  25448328 ctttatcttcaggagcagttttcttcagacgctttaagcttccctttttgttgattcctttgctctctattgttcttccaagacctttttaagatatcaa 25448229  T
Q  104 a 104  Q
    |    
T  25448228 a 25448228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 38282869 - 38282952
Alignment:
Q  6 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 89  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| |||| | ||||||||  |||||||    
T  38282869 tttgtcttcaggagcagttctcttcagacgctttaagcttcctttttattgattcatttgctctattttgttcttctagaacct 38282952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 1578124 - 1578202
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 89  Q
    ||||||||||| |||| |||||| |||||||||||||||||||||||||| ||| |||||| |||||||||||||||||    
T  1578124 cttcaggagcacttctcttcagatgctttaagcttcctttttgttgattcctttgctctcttttgttctttcagaacct 1578202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 6 - 104
Target Start/End: Original strand, 2268814 - 2268912
Alignment:
Q  6 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 104  Q
    |||||||||||||||  |||| |||||| |||  || ||||||||||| |||||||||| |||||| |||||||| |||||||||||||||||||||||    
T  2268814 tttgtcttcaggagcgcttctcttcagatgctacaaacttcctttttgatgattcatttgctctcttttgttcttccagaacctttttaagatgtcaaa 2268912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 103
Target Start/End: Complemental strand, 2327198 - 2327104
Alignment:
Q  10 tcttcaggagcagttcttttcagacgctttaagcttcc-tttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 103  Q
    ||||||||||||||| | |||||||||||||||||||| ||||||||||||| ||| |||| |||||||||| ||  ||||||||||||||||||    
T  2327198 tcttcaggagcagttttcttcagacgctttaagcttccctttttgttgattcctttgctctttattgttcttccaagacctttttaagatgtcaa 2327104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 2267337 - 2267440
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgt 100  Q
    |||||| ||||||||| ||||||| | |||| | |||||||||||||||||||||||||  ||| ||||||||||||||| ||  |||||||||| ||||    
T  2267337 agcactatgtcttcagaagcagttttcttcatatgctttaagcttcctttttgttgatttctttactctctattgttcttccaagacctttttaaaatgt 2267436  T
Q  101 caaa 104  Q
    ||||    
T  2267437 caaa 2267440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 39200796 - 39200720
Alignment:
Q  28 ttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 104  Q
    |||| |||||||||||||||||||||||||||| ||| |||| |||||||||| ||  |||||||||||||||||||    
T  39200796 ttcatacgctttaagcttcctttttgttgattcctttgctctttattgttcttccaagacctttttaagatgtcaaa 39200720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 19717796 - 19717874
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 89  Q
    ||||||||||| |||| ||||||||||||||||||||||||| ||||||| ||| | |||| |||||||| ||||||||    
T  19717796 cttcaggagcacttctcttcagacgctttaagcttcctttttattgattcctttgccctcttttgttcttccagaacct 19717874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 104
Target Start/End: Complemental strand, 22464588 - 22464486
Alignment:
Q  3 cactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttc-agaacctttttaagatgtc 101  Q
    |||||||||||||||||||||| | |||| |  ||||||||||||||||||||||||| ||| |||| |||||||||| | |||   |||||||||||||    
T  22464588 cactttgtcttcaggagcagttttcttcatatactttaagcttcctttttgttgattcctttgctctatattgttcttccaagactttttttaagatgtc 22464489  T
Q  102 aaa 104  Q
    |||    
T  22464488 aaa 22464486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 28492220 - 28492146
Alignment:
Q  15 aggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 89  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||||||  ||||| || ||||| ||||||||    
T  28492220 aggagcacttctcttcagacgctttaagcttcctttttgttgattcatttgttctcttttattcttccagaacct 28492146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 130
Target Start/End: Complemental strand, 44821339 - 44821212
Alignment:
Q  5 ctttgtcttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtca 102  Q
    |||| ||||||||||||||| | |||||||||||||||||| |||||||||||||  |||| |||| || |||||||| ||  |||||||||||||||||    
T  44821339 ctttatcttcaggagcagttttcttcagacgctttaagcttccctttttgttgatgtatttgctctttatttgttcttccaagacctttttaagatgtca 44821240  T
Q  103 aannnnnnnctatggtcctgtacacttg 130  Q
    ||       |||| ||||||||||||||    
T  44821239 aatttttgtctatagtcctgtacacttg 44821212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 102
Target Start/End: Original strand, 10251283 - 10251376
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttcc-tttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtca 102  Q
    |||||||||||||| | |||||||||||||||||||| |||||||||||  |||| |||| || |||||||| ||  |||||||||||||||||    
T  10251283 cttcaggagcagttttcttcagacgctttaagcttccatttttgttgatgtatttgctctttatttgttcttccaagacctttttaagatgtca 10251376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 35040431 - 35040480
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttccttt 50  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||||    
T  35040431 agcactttgtcttcaggagcagttttcttcagacgctttaagcttccttt 35040480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 104
Target Start/End: Original strand, 7310090 - 7310185
Alignment:
Q  6 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 104  Q
    |||||||||||||||| |||| |||||| ||| ||||||||||    |||||||| ||  |||||| |||||||| |||||||| ||||||||||||||    
T  7310090 tttgtcttcaggagcacttctcttcagatgctataagcttccta---gttgattctttagctctcttttgttcttccagaacctatttaagatgtcaaa 7310185  T

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Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 80
Target Start/End: Complemental strand, 20954242 - 20954174
Alignment:
Q  12 ttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctt 80  Q
    |||||||||| |||| |||||| |||| ||||||||||||||||||||| ||| |||||| ||||||||    
T  20954242 ttcaggagcacttctcttcagatgcttcaagcttcctttttgttgattcctttgctctcttttgttctt 20954174  T

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Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 130
Target Start/End: Original strand, 21703121 - 21703242
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttc-ctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtcaaannnn 108  Q
    |||||||||||||| | ||||||||||||||||||| ||||| ||||||  |||| |||| || |||||||| ||  ||| |||||||||||||||        
T  21703121 cttcaggagcagttttcttcagacgctttaagcttctcttttggttgatgtatttgctctttatttgttcttccaagaccattttaagatgtcaaatttt 21703220  T
Q  109 nnnctatggtcctgtacacttg 130  Q
       |||| ||||||||||||||    
T  21703221 tgtctatagtcctgtacacttg 21703242  T

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Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 12284720 - 12284779
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattc 60  Q
    ||||||||| ||||||||||| |||| |||||| | || |||||||||||||||||||||    
T  12284720 agcactttgacttcaggagcacttctcttcagatgtttcaagcttcctttttgttgattc 12284779  T

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Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 10757696 - 10757773
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 89  Q
    ||||| ||||| |||| |||| |||||| |||||||||||| |||||||| ||  |||||| |||||||||||||||||    
T  10757696 cttcaagagcacttctcttcaaacgcttcaagcttcctttt-gttgattccttagctctcttttgttctttcagaacct 10757773  T

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Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 80
Target Start/End: Complemental strand, 33256146 - 33256072
Alignment:
Q  6 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctt 80  Q
    |||||||||| ||||| |||| |||| |||| ||||||||| ||||||||||||| ||| ||||||  |||||||    
T  33256146 tttgtcttcaagagcacttctcttcaaacgccttaagcttcatttttgttgattcctttgctctcttctgttctt 33256072  T

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Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 80
Target Start/End: Complemental strand, 33276318 - 33276244
Alignment:
Q  6 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctt 80  Q
    |||||||||| ||||| |||| |||| |||| ||||||||| ||||||||||||| ||| ||||||  |||||||    
T  33276318 tttgtcttcaagagcacttctcttcaaacgccttaagcttcatttttgttgattcctttgctctcttctgttctt 33276244  T

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Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 21204730 - 21204625
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagat 98  Q
    ||||| ||||||||||||||| || | || ||||||||||||||| |||||||||||||  | || |||| || |||||||||||  |||  ||||||||    
T  21204730 agcacgttgtcttcaggagcacttttctttagacgctttaagcttccctttttgttgatgtacttgctctttatttgttctttcaagaccaatttaagat 21204631  T
Q  99 gtcaaa 104  Q
    ||||||    
T  21204630 gtcaaa 21204625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 58
Target Start/End: Original strand, 23025053 - 23025101
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagctt-cctttttgttgat 58  Q
    |||||||||||||| | |||||||||||||||||| |||||||||||||    
T  23025053 cttcaggagcagttttcttcagacgctttaagcttccctttttgttgat 23025101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 104
Target Start/End: Complemental strand, 21120859 - 21120764
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtcaaa 104  Q
    |||||||||||||| | ||||||||||| |||||| |||||||||||||  | || |||| || |||||||||||  |||  ||||||||||||||    
T  21120859 cttcaggagcagttttcttcagacgcttaaagcttccctttttgttgatatacttgctctttatttgttctttcaagaccaatttaagatgtcaaa 21120764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 104
Target Start/End: Original strand, 21984863 - 21984958
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtcaaa 104  Q
    |||||||||||||| | ||||||||||| |||||| |||||||||||||  | || |||| || |||||||||||  |||  ||||||||||||||    
T  21984863 cttcaggagcagttttcttcagacgcttaaagcttccctttttgttgatgtacttgctctttatttgttctttcaagaccaatttaagatgtcaaa 21984958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 104
Target Start/End: Original strand, 30572457 - 30572552
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtcaaa 104  Q
    |||||||||||||| | |||||||||||||| ||| |||||||||||||  |||| |||| || || ||||| ||  ||| |||||||||||||||    
T  30572457 cttcaggagcagttttcttcagacgctttaaacttccctttttgttgatgtatttgctctttatttattcttccaagaccattttaagatgtcaaa 30572552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 89
Target Start/End: Original strand, 30893346 - 30893432
Alignment:
Q  4 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctcta-ttgttctttcagaacct 89  Q
    |||||| ||||||||||| |||| |||||| |||| ||| ||||| ||||||||||| ||  ||||| | ||| |||||||||||||    
T  30893346 actttgacttcaggagcacttctcttcagatgcttcaagtttcctctttgttgattccttagctctcaatttgctctttcagaacct 30893432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 48704491 - 48704569
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 89  Q
    ||||||||||| |||| || ||| |||| ||||||| ||||||||||||   || |||||| |||||||| ||||||||    
T  48704491 cttcaggagcacttctctttagatgcttcaagcttcatttttgttgatttcattgctctcttttgttcttccagaacct 48704569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 104
Target Start/End: Original strand, 35402146 - 35402203
Alignment:
Q  47 ctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 104  Q
    ||||||||||||||  || |||||| |||||||| || ||||||||||||||| ||||    
T  35402146 ctttttgttgattccattgctctcttttgttcttccataacctttttaagatgacaaa 35402203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 58
Target Start/End: Complemental strand, 21134955 - 21134907
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagctt-cctttttgttgat 58  Q
    |||||||||||||| | ||||||||||| |||||| |||||||||||||    
T  21134955 cttcaggagcagttttcttcagacgcttaaagcttccctttttgttgat 21134907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 77; Significance: 8e-36; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 7971 - 8100
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgt 100  Q
    ||||||||||||||||||||| || | |||||||||||||||||| |||||||||||||| ||| ||||||||||||||| |||||||||||||||||||    
T  7971 agcactttgtcttcaggagcaattttcttcagacgctttaagctttctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgt 8070  T
Q  101 caaannnnnnnctatggtcctgtacacttg 130  Q
    ||||       ||||| |||||||||||||    
T  8071 caaagttttgtctatgatcctgtacacttg 8100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 76; Significance: 3e-35; HSPs: 3)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 19316 - 19419
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgt 100  Q
    |||||||||| ||||||||||||| | |||||| |||||||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||    
T  19316 agcactttgtgttcaggagcagttttcttcagatgctttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgt 19415  T
Q  101 caaa 104  Q
    ||||    
T  19416 caaa 19419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 104
Target Start/End: Complemental strand, 21945 - 21841
Alignment:
Q  2 gcactttgtcttcaggagcagttcttttcagacgctttaagcttc-ctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatg 99  Q
    ||||||||||||||||||||||  | |||||||  |||||||||| ||||||||||||  |||| |||| || |||||||| ||  ||||||||||||||    
T  21945 gcactttgtcttcaggagcagtattcttcagacattttaagcttcactttttgttgatgtatttgctctttatttgttcttccaagacctttttaagatg 21846  T
Q  100 tcaaa 104  Q
    |||||    
T  21845 tcaaa 21841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 104
Target Start/End: Original strand, 9853 - 9948
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtcaaa 104  Q
    |||||||||||||| | ||| |||||||||||||| |||||||||||||  | || |||| || |||||||| ||  |||||||||||||||||||    
T  9853 cttcaggagcagttttcttctgacgctttaagcttccctttttgttgatgtacttgctctttatttgttcttccaagacctttttaagatgtcaaa 9948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 143372 - 143501
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgt 100  Q
    ||||||||||||||| |||||||| | ||||||||||||||||||||||||| ||||||| ||| ||||||||||||||| |||||||||||||| ||||    
T  143372 agcactttgtcttcaagagcagttttcttcagacgctttaagcttcctttttcttgattcctttgctctctattgttcttccagaacctttttaatatgt 143471  T
Q  101 caaannnnnnnctatggtcctgtacacttg 130  Q
    ||||       |||||||||| ||||||||    
T  143472 caaatttttgtctatggtcctatacacttg 143501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1359 (Bit Score: 72; Significance: 8e-33; HSPs: 2)
Name: scaffold1359
Description:

Target: scaffold1359; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 517 - 414
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgt 100  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| ||| |||| |||||||||| ||  |||||||||||||||    
T  517 agcactttgtcttcaggagcagttttcttcagacgctttaagcttcctttttgttgattcctttgctctttattgttcttccaagacctttttaagatgt 418  T
Q  101 caaa 104  Q
    ||||    
T  417 caaa 414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1359; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 1610 - 1552
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagctt-cctttttgttgat 58  Q
    |||||||||||||| | ||||||| | ||||||| |||||||||| |||||||||||||    
T  1610 agcactttgtcttctgtagcagttttcttcagacactttaagcttccctttttgttgat 1552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 71; Significance: 3e-32; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 33022926 - 33023028
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgt 100  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||| ||||| ||||||||| ||  |||||||||||||||    
T  33022926 agcactttgtcttcaggagcagtttttttcagacgttttaagcttcctttttgttgattcctttgctctcgattgttcttccaagacctttttaagatgt 33023025  T
Q  101 caa 103  Q
    |||    
T  33023026 caa 33023028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 7745522 - 7745393
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgt 100  Q
    |||||| || ||| ||||||| |||| ||||||||||| ||||||||||||||||||| ||||| |||||| ||||||||||||||||| ||||||||||    
T  7745522 agcactatgactttaggagcacttctcttcagacgcttcaagcttcctttttgttgatccatttgctctcttttgttctttcagaacctatttaagatgt 7745423  T
Q  101 caaannnnnnnctatggtcctgtacacttg 130  Q
    ||||       ||||||| |||||||||||    
T  7745422 caaatttttgtctatggttctgtacacttg 7745393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 5430146 - 5430249
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgt 100  Q
    ||||||||||||||||||||| || | ||| ||||||||||||||||||||||||||||| ||| |||| |||||||||| ||  |||||||||||||||    
T  5430146 agcactttgtcttcaggagcacttttcttcggacgctttaagcttcctttttgttgattcctttgctctttattgttcttccaagacctttttaagatgt 5430245  T
Q  101 caaa 104  Q
    ||||    
T  5430246 caaa 5430249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 31118138 - 31118241
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgt 100  Q
    ||||||||||||||| ||| |||| | ||||||||||||||||||||||||||||||||| ||| |||| |||||||||| ||  |||||||||||||||    
T  31118138 agcactttgtcttcatgagtagttttcttcagacgctttaagcttcctttttgttgattcctttgctctttattgttcttccaagacctttttaagatgt 31118237  T
Q  101 caaa 104  Q
    ||||    
T  31118238 caaa 31118241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 21910809 - 21910892
Alignment:
Q  6 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 89  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| |||||| ||||||||  |||||||    
T  21910809 tttgtcttcaggagcacttctcttcagacgctttaagcttcctttttgttgattcatttgctctcttttgttcttctagaacct 21910892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 14086412 - 14086333
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctt 80  Q
    |||||||||||||||||||||||| | |||| |||||||||||||||||||||||||||| ||| |||| ||||||||||    
T  14086412 agcactttgtcttcaggagcagttttcttcatacgctttaagcttcctttttgttgattcctttgctctttattgttctt 14086333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 6 - 80
Target Start/End: Original strand, 26784624 - 26784698
Alignment:
Q  6 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctt 80  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||| |||||| ||||||||    
T  26784624 tttgtcttcaggagcacttctcttcagacgctttaagcttcctttttgttgattcctttgctctcttttgttctt 26784698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 98
Target Start/End: Original strand, 33933582 - 33933678
Alignment:
Q  3 cactttgtcttcaggagcagttcttttcagacgctttaagcttc-ctttttgttgattcattttctctctattgttctttcagaacctttttaagat 98  Q
    |||||| ||||||||||||||| | |||||||| |||||||||| |||||||||||||| ||| ||||||||||||||| ||  |||||||||||||    
T  33933582 cactttttcttcaggagcagttttcttcagacgatttaagcttctctttttgttgattcctttgctctctattgttcttccaagacctttttaagat 33933678  T

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Target: chr5; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 17815250 - 17815333
Alignment:
Q  6 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 89  Q
    |||||||||||||||| |||| |||||| | |||||||||||||||||||||||| ||| |||||| |||||||| ||||||||    
T  17815250 tttgtcttcaggagcacttctcttcagatgttttaagcttcctttttgttgattcctttactctcttttgttcttccagaacct 17815333  T

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Target: chr5; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 104
Target Start/End: Original strand, 15517252 - 15517353
Alignment:
Q  5 ctttgtcttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtca 102  Q
    |||| ||||||||||||||| | |||||||||||||||||| |||||||||||||  |||| |||| || |||||||||||  |||||||||||||||||    
T  15517252 ctttatcttcaggagcagttttcttcagacgctttaagcttccctttttgttgatgtatttgctctttatttgttctttcaagacctttttaagatgtca 15517351  T
Q  103 aa 104  Q
    ||    
T  15517352 aa 15517353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 29138268 - 29138163
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcc-tttttgttgattcattttctctcta-ttgttctttcagaacctttttaagat 98  Q
    |||||||||||||||||| ||||| | |||||||||||||||||||| |||||||||||  |||| |||| || |||||||| ||  |||||||||||||    
T  29138268 agcactttgtcttcaggaacagttttcttcagacgctttaagcttccatttttgttgatgtatttgctctttacttgttcttccaagacctttttaagat 29138169  T
Q  99 gtcaaa 104  Q
    ||||||    
T  29138168 gtcaaa 29138163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 130
Target Start/End: Original strand, 20551149 - 20551269
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttcctttt-tgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnn 109  Q
    ||||||||||| |||| |||||| |||| |||||||||||| |||||||||  || |||||| |||||||| |||||||| ||||||||||||||         
T  20551149 cttcaggagcacttctcttcagatgcttcaagcttccttttttgttgattccattgctctcttttgttcttccagaacctatttaagatgtcaaattttt 20551248  T
Q  110 nnctatggtcctgtacacttg 130  Q
      |||||||||| ||||||||    
T  20551249 gtctatggtcctctacacttg 20551269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 98
Target Start/End: Original strand, 26759462 - 26759556
Alignment:
Q  5 ctttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagat 98  Q
    |||| ||||||||||||||| | |||||||||||||||||||||||||||||||  |||| |||| || |||||||| ||  |||||||||||||    
T  26759462 ctttatcttcaggagcagttttcttcagacgctttaagcttcctttttgttgatgtatttgctctttatttgttcttccaagacctttttaagat 26759556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 89312 - 89224
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 89  Q
    ||||||||| |||||| |||| |||| ||||||| ||| ||||||||||||||||||||| ||  |||||| |||||||| ||||||||    
T  89312 agcactttgacttcagaagcacttctcttcagacacttcaagcttcctttttgttgattccttagctctcttttgttcttccagaacct 89224  T

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Target: chr5; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 4887284 - 4887364
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctctattgttctt 80  Q
    |||||||| |||| |||| ||||| | |||||||||||||||||| ||||||||||||||| ||| |||||||||||||||    
T  4887284 agcactttatctttaggaacagttttcttcagacgctttaagcttccctttttgttgattcctttgctctctattgttctt 4887364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 130
Target Start/End: Original strand, 9089199 - 9089320
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtcaaannnn 108  Q
    |||||||||||||| | |||||||||||||||||| |||||||||||||  |||| |||| || |||||||| ||  |||||||||||||||||||        
T  9089199 cttcaggagcagttttcttcagacgctttaagcttccctttttgttgatgtatttgctctttatttgttcttccaagacctttttaagatgtcaaatttt 9089298  T
Q  109 nnnctatggtcctgtacacttg 130  Q
       |||| ||||||||||||||    
T  9089299 tgtctatagtcctgtacacttg 9089320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 6512313 - 6512235
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 89  Q
    |||||||| || |||| ||||||||| ||||||||||||||||||||||||||| || ||| ||||||||  |||||||    
T  6512313 cttcaggaacatttctcttcagacgccttaagcttcctttttgttgattcatttgctatcttttgttcttcaagaacct 6512235  T

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Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 104
Target Start/End: Original strand, 11994202 - 11994296
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttcc-tttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 104  Q
    |||||||||||||| | |||||| ||||||||||||| ||||||||||||| ||| ||||  ||||||||| ||  ||||||||||||| |||||    
T  11994202 cttcaggagcagttttcttcagatgctttaagcttccctttttgttgattcctttgctcttaattgttcttccaagacctttttaagatatcaaa 11994296  T

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Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 12 - 89
Target Start/End: Complemental strand, 21072105 - 21072028
Alignment:
Q  12 ttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 89  Q
    |||| ||||| |||| ||||||||||| ||||||||||||||||||||| ||  |||| | |||||||||||||||||    
T  21072105 ttcatgagcacttctcttcagacgcttcaagcttcctttttgttgattccttagctcttttttgttctttcagaacct 21072028  T

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Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 41566305 - 41566248
Alignment:
Q  3 cactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattc 60  Q
    |||||||||||||||||||||||| |||||||| ||||| |||| |||||||||||||    
T  41566305 cactttgtcttcaggagcagttctcttcagacgttttaaccttcatttttgttgattc 41566248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 104
Target Start/End: Original strand, 42243979 - 42244079
Alignment:
Q  5 ctttgtcttcaggagcagttcttttcagacgctttaagcttcc-tttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 103  Q
    |||| ||||||||||| ||| | |||| ||||||||||||||| ||||||||||||  ||| |||| |||||||||| ||  ||||||||||||| ||||    
T  42243979 ctttatcttcaggagctgttttcttcatacgctttaagcttccctttttgttgatttctttgctctttattgttcttccaatacctttttaagatatcaa 42244078  T
Q  104 a 104  Q
    |    
T  42244079 a 42244079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 11 - 104
Target Start/End: Complemental strand, 3245289 - 3245194
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtcaaa 104  Q
    |||||||||||||| | |||||||||||||||||| |||||||||||||  |||| |||| || |||||||| ||  ||| |||||||||||||||    
T  3245289 cttcaggagcagttttcttcagacgctttaagcttccctttttgttgatgtatttgctctttatttgttcttccaagaccattttaagatgtcaaa 3245194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 11 - 104
Target Start/End: Complemental strand, 30115740 - 30115645
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtcaaa 104  Q
    |||||||||||||| | |||||||||||||||||| |||||||||||||  |||| |||| || |||||||| ||  ||| |||||||||||||||    
T  30115740 cttcaggagcagttttcttcagacgctttaagcttccctttttgttgatgtatttgctctttatttgttcttccaataccattttaagatgtcaaa 30115645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 23412856 - 23412778
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 89  Q
    ||||||||||| |||| |||||| |||| |||||||||||||||||||||  || |||||| ||| |||| ||||||||    
T  23412856 cttcaggagcacttctcttcagatgcttcaagcttcctttttgttgattccattgctctcttttgctcttccagaacct 23412778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 28139849 - 28139954
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagat 98  Q
    |||| ||| ||||||||||||||| | |||||| ||||||||||| |||| ||||||||  |||| |||| || |||||||| ||  |||||||||||||    
T  28139849 agcagtttatcttcaggagcagttttcttcagatgctttaagcttcccttgttgttgatgtatttgctctttatttgttcttccaatacctttttaagat 28139948  T
Q  99 gtcaaa 104  Q
    ||||||    
T  28139949 gtcaaa 28139954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 99
Target Start/End: Original strand, 30743293 - 30743388
Alignment:
Q  5 ctttgtcttcaggagcagttcttttcagacgctttaagc-ttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatg 99  Q
    |||| |||||||||| |||| | |||||||||||||||| |||||||||| ||| |  ||| |||| |||||||||| ||  ||||||||||||||    
T  30743293 ctttatcttcaggagtagttttcttcagacgctttaagctttcctttttgctgagttctttgctctttattgttcttccaagacctttttaagatg 30743388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 60
Target Start/End: Complemental strand, 12352684 - 12352635
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattc 60  Q
    ||||||||||| |||| |||||| |||| |||||||||||||||||||||    
T  12352684 cttcaggagcacttctcttcagatgcttcaagcttcctttttgttgattc 12352635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 58
Target Start/End: Original strand, 10849054 - 10849102
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagctt-cctttttgttgat 58  Q
    |||||||||||||| | |||||||||||||||||| |||||||||||||    
T  10849054 cttcaggagcagttttcttcagacgctttaagcttccctttttgttgat 10849102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 104
Target Start/End: Complemental strand, 25930027 - 25929933
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttcc-tttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtcaaa 104  Q
    ||||| |||||||| | |||||||||||||| ||||| |||||||||||  |||| |||| || ||||||||||| |  |||||||||||||||||    
T  25930027 cttcaagagcagttttcttcagacgctttaaccttccatttttgttgatgtatttgctctttacttgttctttca-agactttttaagatgtcaaa 25929933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 11 - 60
Target Start/End: Complemental strand, 21198887 - 21198838
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattc 60  Q
    |||||||||||||  | |||||| |||| |||||||||||||||||||||    
T  21198887 cttcaggagcagtattcttcagatgcttcaagcttcctttttgttgattc 21198838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 6499520 - 6499556
Alignment:
Q  23 ttcttttcagacgctttaagcttcctttttgttgatt 59  Q
    ||||||||||| |||| ||||||||||||||||||||    
T  6499520 ttcttttcagatgcttcaagcttcctttttgttgatt 6499556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1331 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold1331
Description:

Target: scaffold1331; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 439 - 336
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgt 100  Q
    ||||||||| |||||||||||||| | ||||||||||||||||||||||||| ||||||||||| |||| | |||||||| || ||||||||||||||||    
T  439 agcactttgccttcaggagcagttttcttcagacgctttaagcttcctttttattgattcatttgctctttgttgttcttccaaaacctttttaagatgt 340  T
Q  101 caaa 104  Q
    ||||    
T  339 caaa 336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 6 - 130
Target Start/End: Original strand, 103843 - 103967
Alignment:
Q  6 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaan 105  Q
    |||||||||||||||  |||| |||||| |||| ||||||||| ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||     
T  103843 tttgtcttcaggagcgcttctcttcagatgcttcaagcttcctatttgttgattcatttgctctcttttgttctttcagaacctttttaagatgtcaaat 103942  T
Q  106 nnnnnnctatggtcctgtacacttg 130  Q
          ||| |||||||||||||||    
T  103943 ttttgtctaaggtcctgtacacttg 103967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 89900 - 89797
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgt 100  Q
    |||||||||||||||||| || || | ||||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||  |||||||||||||||    
T  89900 agcactttgtcttcaggaacaattttcttcagacgctttaagcttcctttttgttgattcctttgctctctattgttcttccaagacctttttaagatgt 89801  T
Q  101 caaa 104  Q
    ||||    
T  89800 caaa 89797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 64; Significance: 4e-28; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 212635 - 212738
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgt 100  Q
    ||||||||| ||||||||||| |||| |||||||| || ||||||||||||||||||||| ||  |||||| |||||||| |||||||||||||||||||    
T  212635 agcactttgacttcaggagcacttctcttcagacgtttcaagcttcctttttgttgattccttagctctcttttgttcttccagaacctttttaagatgt 212734  T
Q  101 caaa 104  Q
    ||||    
T  212735 caaa 212738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 58
Target Start/End: Complemental strand, 246064 - 246016
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagctt-cctttttgttgat 58  Q
    |||||||||||||| | |||||||||||||||||| |||||||||||||    
T  246064 cttcaggagcagttttcttcagacgctttaagcttccctttttgttgat 246016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 80
Target Start/End: Complemental strand, 6026 - 5952
Alignment:
Q  6 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctt 80  Q
    |||||||||||||||| |||  |||||| |||| ||| || |||||||||||||  ||| |||||| ||||||||    
T  6026 tttgtcttcaggagcacttcgcttcagatgcttcaagttttctttttgttgatttctttgctctcttttgttctt 5952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 11 - 104
Target Start/End: Original strand, 22952 - 23045
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 104  Q
    ||||||||| |||||| ||||||||||||||||||| ||||||||||||| ||| ||||||||||||||| ||  |||||||||||||||||||    
T  22952 cttcaggagtagttctcttcagacgctttaagcttcatttttgttgattcttttgctctctattgttcttccaagacctttttaagatgtcaaa 23045  T

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Target: scaffold0171 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 27274 - 27145
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgt 100  Q
    ||||||||| |||||| |||| |||| |||||| |||| ||||||||||||||||||||| ||| |||||| ||||| ||||||||||| ||||||||||    
T  27274 agcactttgccttcagaagcacttctcttcagatgcttcaagcttcctttttgttgattcctttgctctcttttgttatttcagaacctatttaagatgt 27175  T
Q  101 caaannnnnnnctatggtcctgtacacttg 130  Q
     | |       |||||||||||||||||||    
T  27174 tagatatttttctatggtcctgtacacttg 27145  T

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Target: scaffold0485 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0485
Description:

Target: scaffold0485; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 9205 - 9103
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgt 100  Q
    |||||| || |||||||| || |||| ||||||||||| |||||||||||| |||||||||||| |||||| |||||||| |||||||| ||||||||||    
T  9205 agcactgtgacttcaggatcacttctcttcagacgcttcaagcttcctttt-gttgattcatttgctctcttttgttcttccagaacctatttaagatgt 9107  T
Q  101 caaa 104  Q
    ||||    
T  9106 caaa 9103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 5521 - 5391
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctc-tattgttctttcagaacctttttaagatg 99  Q
    ||||||||  ||||||||||| |||| ||||||||||| ||| |||||||| |||||||||||| ||||| | |||||||| |||||||| |||||||||    
T  5521 agcacttttacttcaggagcacttctcttcagacgcttcaaggttccttttagttgattcatttgctctcattttgttcttccagaacctatttaagatg 5422  T
Q  100 tcaaannnnnnnctatggtcctgtacacttg 130  Q
    |||||       |||||||||||||| ||||    
T  5421 tcaaatttttgtctatggtcctgtacgcttg 5391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 104
Target Start/End: Complemental strand, 20790 - 20697
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 104  Q
    ||||||||||| |||| ||||||||||| || |||||||||||||||||| ||  |||||| |||||||| |||||||| ||||||||||||||    
T  20790 cttcaggagcacttctcttcagacgcttcaaacttcctttttgttgattccttagctctcttttgttcttccagaacctatttaagatgtcaaa 20697  T

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Target: scaffold0334 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 10075 - 10204
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgt 100  Q
    ||||||||| |||||| |||| |||| |||||| |||| |||||||||||||||||||||  || |||||| ||||||||||||||||| || ||||| |    
T  10075 agcactttgacttcagaagcatttctcttcagatgcttcaagcttcctttttgttgattccattcctctcttttgttctttcagaacctattgaagatat 10174  T
Q  101 caaannnnnnnctatggtcctgtacacttg 130  Q
    ||||       |||||||| ||||||||||    
T  10175 caaatttttgtctatggtcatgtacacttg 10204  T

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Target: scaffold0022 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 39693 - 39781
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 89  Q
    ||||||||| ||||||||||| |||| |||||| |||| ||||||||||||||||||||| ||| |||||| |||||||| ||||||||    
T  39693 agcactttgacttcaggagcacttctcttcagatgcttcaagcttcctttttgttgattcctttgctctcttttgttcttccagaacct 39781  T

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Target: scaffold0022; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 137753 - 137841
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 89  Q
    ||||||||| ||||||||||| |||| |||||| |||| ||||||||||||||||||||| ||| |||||| |||||||| ||||||||    
T  137753 agcactttgacttcaggagcacttctcttcagatgcttcaagcttcctttttgttgattcctttgctctcttttgttcttccagaacct 137841  T

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Target: scaffold0012 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 104
Target Start/End: Complemental strand, 215306 - 215206
Alignment:
Q  5 ctttgtcttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 103  Q
    |||| ||||||||||||||| | |||||||||||||||||| ||||||||||||||| ||| |||| |||||||||| ||  | ||||||||||||||||    
T  215306 ctttatcttcaggagcagttttcttcagacgctttaagcttccctttttgttgattcctttgctctttattgttcttccaagatctttttaagatgtcaa 215207  T
Q  104 a 104  Q
    |    
T  215206 a 215206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 11 - 130
Target Start/End: Complemental strand, 6528 - 6408
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttcc-tttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnn 109  Q
    |||||||||||||| | |||||||||||||||||||| ||||||||||||| ||| |||| |||||||||| ||  ||||||||||||| |||||         
T  6528 cttcaggagcagttttcttcagacgctttaagcttccctttttgttgattcctttgctctttattgttcttccaagacctttttaagatatcaaattttt 6429  T
Q  110 nnctatggtcctgtacacttg 130  Q
      |||| ||||||||||||||    
T  6428 gtctatagtcctgtacacttg 6408  T

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Target: scaffold0026 (Bit Score: 52; Significance: 7e-21; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 8183 - 8266
Alignment:
Q  6 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 89  Q
    |||||||||||||||| |||| ||||||||| |||||||| |||||||||||||| ||| |||||| |||||||| ||||||||    
T  8183 tttgtcttcaggagcacttctcttcagacgccttaagcttactttttgttgattcctttgctctcttttgttcttccagaacct 8266  T

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Target: scaffold0026; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 6 - 130
Target Start/End: Original strand, 60302 - 60426
Alignment:
Q  6 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaan 105  Q
    |||||||||| ||||| |||| ||||||||| ||||||||| ||||||||||||| ||| |||||| |||||||| ||||||||  | | |||||||||     
T  60302 tttgtcttcaagagcatttctcttcagacgccttaagcttcatttttgttgattcctttgctctcttttgttcttccagaacctaataatgatgtcaaat 60401  T
Q  106 nnnnnnctatggtcctgtacacttg 130  Q
          |||||||||||||||||||    
T  60402 ttttgtctatggtcctgtacacttg 60426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0861 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0861
Description:

Target: scaffold0861; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 4776 - 4687
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctt 90  Q
    ||||||||| ||||||||||| |||| |||||| |||| || |||||||||||||||||| ||| |||||| |||||||| |||||||||    
T  4776 agcactttgacttcaggagcacttctcttcagatgcttcaaacttcctttttgttgattcctttgctctcttttgttcttccagaacctt 4687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0452 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0452
Description:

Target: scaffold0452; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 104
Target Start/End: Complemental strand, 1693 - 1593
Alignment:
Q  5 ctttgtcttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 103  Q
    |||| ||||||||||||||| | |||||||||||||||||| ||||||||||||||| ||| |||| ||||||||||  |  ||||||||||||| ||||    
T  1693 ctttatcttcaggagcagttttcttcagacgctttaagcttccctttttgttgattcctttgctctttattgttcttctaagacctttttaagatatcaa 1594  T
Q  104 a 104  Q
    |    
T  1593 a 1593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 18450 - 18362
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 89  Q
    ||||||||| ||||||||||| |||| |||||| |||| ||||||||||||||||||||| ||| |||||| |||||||| || |||||    
T  18450 agcactttgacttcaggagcacttctcttcagatgcttcaagcttcctttttgttgattcctttgctctcttttgttcttccaaaacct 18362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 78194 - 78090
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctctattgttctttcagaacctttttaagatg 99  Q
    |||||| | ||||||||||||||| | |||||||||||||| ||| ||||||||||||||| ||| |||| |||||||||| ||  | ||||||||||||    
T  78194 agcactatatcttcaggagcagttttcttcagacgctttaatctttcctttttgttgattcctttgctctttattgttcttccaagatctttttaagatg 78095  T
Q  100 tcaaa 104  Q
    |||||    
T  78094 tcaaa 78090  T

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Target: scaffold0426 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 13898 - 13981
Alignment:
Q  6 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 89  Q
    |||||||||||||||| |||| ||| ||||| |||||||||||||| |||||||| ||| |||||| |||||||| ||||||||    
T  13898 tttgtcttcaggagcacttctcttctgacgcattaagcttccttttcgttgattcctttgctctcttttgttcttccagaacct 13981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 4829 - 4751
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 89  Q
    ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||| ||| || ||||||||  |||||||    
T  4829 cttcaggagcacttctcttcagacgctttaagcttcctttttgttgattcctttgctcccttttgttcttctagaacct 4751  T

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Target: scaffold0146 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 15377 - 15455
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 89  Q
    ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||  |||||| ||||||||  |||||||    
T  15377 cttcaggagcacttctcttcagacgctttaagcttcctttttgttgattccttagctctcttttgttcttaaagaacct 15455  T

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Target: scaffold0083 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 25811 - 25733
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 89  Q
    ||||||||||| |||| ||||||||| |||| |||||||||||||||||| ||| |||||| |||||||| ||||||||    
T  25811 cttcaggagcacttctcttcagacgccttaatcttcctttttgttgattcctttgctctcttttgttcttccagaacct 25733  T

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Target: scaffold0065 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 1985 - 2071
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaac 87  Q
    ||||||||| ||||||||||| |||| ||||||| ||||||||||| ||||||||||||| ||  |||||| |||||||| ||||||    
T  1985 agcactttgacttcaggagcacttctcttcagacactttaagcttcatttttgttgattccttcgctctcttttgttcttccagaac 2071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0479 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0479
Description:

Target: scaffold0479; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 11 - 104
Target Start/End: Original strand, 10228 - 10321
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 104  Q
    ||||||||||| |||| |||||| |||| ||||||||||||| ||||||| ||   ||||| |||||||| |||||||| ||||||||||||||    
T  10228 cttcaggagcacttctcttcagatgcttcaagcttcctttttattgattctttagatctcttttgttcttccagaacctatttaagatgtcaaa 10321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0771 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0771
Description:

Target: scaffold0771; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 757 - 845
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 89  Q
    |||| |||| ||||| ||||| |||| |||||| |||||||||||||||||||||||||| ||| |||||| ||||| || ||||||||    
T  757 agcattttgacttcaagagcacttctcttcagatgctttaagcttcctttttgttgattcctttgctctcttttgtttttccagaacct 845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 14943 - 15031
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 89  Q
    ||||||||| ||| ||||||| |||| ||||||| ||||||||||| ||||||||||||| ||  |||||| |||||||| ||||||||    
T  14943 agcactttgacttaaggagcacttctcttcagacactttaagcttcatttttgttgattccttcgctctcttttgttcttccagaacct 15031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 104
Target Start/End: Complemental strand, 5411 - 5311
Alignment:
Q  5 ctttgtcttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 103  Q
    |||| ||||||||||||||| | |||| ||||||||||||| ||||||||||||||| ||| |||| |||||||||| ||  |||||||||| || ||||    
T  5411 ctttatcttcaggagcagttttcttcaaacgctttaagcttccctttttgttgattcctttgctctttattgttcttccaagacctttttaaaatatcaa 5312  T
Q  104 a 104  Q
    |    
T  5311 a 5311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1434 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold1434
Description:

Target: scaffold1434; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 65
Target Start/End: Complemental strand, 611 - 552
Alignment:
Q  6 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcatttt 65  Q
    |||||||||||||||| |||| ||||||| ||||||||||||||||||||||||| ||||    
T  611 tttgtcttcaggagcacttctcttcagacactttaagcttcctttttgttgattcctttt 552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0411 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 10 - 130
Target Start/End: Original strand, 12501 - 12621
Alignment:
Q  10 tcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnn 109  Q
    |||||||||| | || | |||| | |||| |||||||||||||||||||||  || |||||| |||||||| |||||||| ||||||||||||||         
T  12501 tcttcaggagaacttttattcaaatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacctatttaagatgtcaaattttt 12600  T
Q  110 nnctatggtcctgtacacttg 130  Q
      |||||||| ||||||||||    
T  12601 gtctatggtcttgtacacttg 12621  T

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Target: scaffold0210 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 1920 - 2007
Alignment:
Q  9 gtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaag 96  Q
    ||||||||||||| |||| | |||| |||||||||||||||||| ||||||| ||| |||||| |||||||| ||| |||| ||||||    
T  1920 gtcttcaggagcacttctctgcagatgctttaagcttcctttttattgattcctttgctctcttttgttcttccaggacctatttaag 2007  T

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Target: scaffold0084 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 32759 - 32842
Alignment:
Q  6 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 89  Q
    ||||||||||| |||| || | ||||||||| ||||||||||||||||||||||| ||| |||||| ||||||||  |||||||    
T  32759 tttgtcttcagaagcacttttcttcagacgccttaagcttcctttttgttgattcctttactctcttttgttcttctagaacct 32842  T

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Target: scaffold0084; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 49605 - 49688
Alignment:
Q  6 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctt 90  Q
    |||||||||| ||||| |||| ||| ||||| ||||||||||||||||||||||| ||| |||||| |||||||| ||| |||||    
T  49605 tttgtcttcaagagcacttctcttc-gacgccttaagcttcctttttgttgattcctttgctctcttttgttcttccagcacctt 49688  T

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Target: scaffold0247 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 23408 - 23350
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagctt-cctttttgttgat 58  Q
    |||||||||||||||||||||||| | |||||||||||||||||| |||||||||||||    
T  23408 agcactttgtcttcaggagcagttttcttcagacgctttaagcttccctttttgttgat 23350  T

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Target: scaffold0066 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 130
Target Start/End: Complemental strand, 60704 - 60585
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnn 110  Q
    ||||||||||| |||| ||||||||||| ||||||||||||||||||||| ||  ||  || || ||||||||||||||  | ||||| |||||          
T  60704 cttcaggagcacttctcttcagacgcttcaagcttcctttttgttgattccttagcttcctttttttctttcagaacctaataaagatatcaaatttttg 60605  T
Q  111 nctatggtcctgtacacttg 130  Q
     |||||||||||||||||||    
T  60604 tctatggtcctgtacacttg 60585  T

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Target: scaffold0471 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 104
Target Start/End: Original strand, 3621 - 3722
Alignment:
Q  5 ctttgtcttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtca 102  Q
    |||| ||||||||||||||| | ||||||| |||||||||| |||||||||||||  |||| |||| || |||||||| ||  |||||||||||||||||    
T  3621 ctttatcttcaggagcagttttcttcagacactttaagcttccctttttgttgatgtatttgctctttatttgttcttccaatacctttttaagatgtca 3720  T
Q  103 aa 104  Q
    ||    
T  3721 aa 3722  T

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Target: scaffold0527 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0527
Description:

Target: scaffold0527; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 104
Target Start/End: Original strand, 162 - 256
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtcaaa 104  Q
    |||||||||||||| | |||||||||||||||||||| ||||||||||  |||| |||| || |||||||| ||  ||| ||||||| |||||||    
T  162 cttcaggagcagttttcttcagacgctttaagcttcccttttgttgatgtatttgctctttatttgttcttccaagaccattttaagttgtcaaa 256  T

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Target: scaffold0527; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 104
Target Start/End: Original strand, 8225 - 8319
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtcaaa 104  Q
    |||||||||||||| | |||||||||||||||||||| ||||||||||  |||| |||| || |||||||| ||  ||| ||||||| |||||||    
T  8225 cttcaggagcagttttcttcagacgctttaagcttcccttttgttgatgtatttgctctttatttgttcttccaagaccattttaagttgtcaaa 8319  T

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Target: scaffold0161 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 130
Target Start/End: Complemental strand, 9956 - 9838
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnn 110  Q
    ||||||||||| |||| |||| |  ||| |||||||||||||||||||||  || |||||| |||||||| ||||| || ||||||||||||||          
T  9956 cttcaggagcacttctcttcatattcttcaagcttcctttttgttgattccattgctctcttttgttcttccagaa-ctatttaagatgtcaaatttttg 9858  T
Q  111 nctatggtcctgtacacttg 130  Q
      ||||||||||||||||||    
T  9857 tttatggtcctgtacacttg 9838  T

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Target: scaffold0120 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 130
Target Start/End: Complemental strand, 36583 - 36476
Alignment:
Q  23 ttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnnnctatggtcctg 122  Q
    |||| |||||| |||| ||||||||||||  |||||||  || |||||| |||||||| || ||||| ||||||||||||||       |||||||||||    
T  36583 ttctcttcagatgcttcaagcttccttttatttgattccattgctctcttttgttcttccataacctatttaagatgtcaaatttttgtctatggtcctg 36484  T
Q  123 tacacttg 130  Q
    ||||||||    
T  36483 tacacttg 36476  T

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Target: scaffold0120; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 42422 - 42529
Alignment:
Q  23 ttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnnnctatggtcctg 122  Q
    |||| |||||| |||| ||||||||||||  |||||||  || |||||| |||||||| || ||||| ||||||||||||||       |||||||||||    
T  42422 ttctcttcagatgcttcaagcttccttttatttgattccattgctctcttttgttcttccataacctatttaagatgtcaaatttttgtctatggtcctg 42521  T
Q  123 tacacttg 130  Q
    ||||||||    
T  42522 tacacttg 42529  T

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Target: scaffold0004 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 377395 - 377317
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 89  Q
    ||||||||||| | || ||||||| |||||||||||||||| |||||||| ||  |||||| |||||||| ||||||||    
T  377395 cttcaggagcactactcttcagacactttaagcttccttttagttgattccttagctctcttttgttcttccagaacct 377317  T

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Target: scaffold0004; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 30689 - 30612
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 89  Q
    ||||||||||| || | ||||||||  |||||||||| |||||||||||| ||| |||||| |||||||| ||||||||    
T  30689 cttcaggagcaatt-tcttcagacgtcttaagcttccattttgttgattcctttgctctcttttgttcttccagaacct 30612  T

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Target: scaffold0004; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 220528 - 220607
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctcta-ttgttctttcagaacct 89  Q
    ||||||||||| || | ||||||||||| ||| |||||||||||||||||  |  ||||| | |||||||||||||||||    
T  220528 cttcaggagcacttttcttcagacgcttcaaggttcctttttgttgattccatagctctcaatttgttctttcagaacct 220607  T

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Target: scaffold0607 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 7196 - 7301
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagat 98  Q
    |||||||||||||||| ||||||| | |||||| ||||||||||| |||||| ||||||  |||| |||  || |||||||| ||  |||||||||||||    
T  7196 agcactttgtcttcagtagcagttttcttcagatgctttaagcttcccttttggttgatgtatttgctccttatttgttcttccaagacctttttaagat 7295  T
Q  99 gtcaaa 104  Q
    ||||||    
T  7296 gtcaaa 7301  T

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Target: scaffold0015 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 104
Target Start/End: Original strand, 61090 - 61191
Alignment:
Q  5 ctttgtcttcaggagcagttcttttcagacgctttaagcttc-ctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtca 102  Q
    |||| ||||||||||||||| | |||||| |||||||||| | ||||||||||||  |||| |||| || |||||||| ||  |||||||||||||||||    
T  61090 ctttatcttcaggagcagttttcttcagatgctttaagctccactttttgttgatgtatttgctctttatttgttcttccaagacctttttaagatgtca 61189  T
Q  103 aa 104  Q
    ||    
T  61190 aa 61191  T

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Target: scaffold0035 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 130
Target Start/End: Complemental strand, 19294 - 19174
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttcct-ttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnn 109  Q
    ||||||||||| |||| ||||||||||| ||||||||| ||||||||| || ||  |||||| |||||||| || |||||  | ||||| |||||         
T  19294 cttcaggagcacttctcttcagacgcttcaagcttccttttttgttgactccttagctctcttttgttcttccataacctaataaagatatcaaattttt 19195  T
Q  110 nnctatggtcctgtacacttg 130  Q
      |||||||||||||||||||    
T  19194 gtctatggtcctgtacacttg 19174  T

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Target: scaffold0035; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 15 - 104
Target Start/End: Complemental strand, 98992 - 98901
Alignment:
Q  15 aggagcagttcttttcagacgctttaagcttc-ctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtcaaa 104  Q
    |||||||||| | |||||| |||||||||||| |||||||| |||  |||| |||| || |||||||| ||  |||||||||||||||||||    
T  98992 aggagcagttttcttcagaagctttaagcttcactttttgtcgatgtatttgctctttacttgttcttccaagacctttttaagatgtcaaa 98901  T

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Target: scaffold0275 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 8566 - 8640
Alignment:
Q  1 agcactttgtcttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctctatt 74  Q
    ||||||||  |||||||||||||| | ||||||| |||||||||| |||||||||||||  ||||||||| ||||    
T  8566 agcactttaacttcaggagcagttttcttcagacactttaagcttccctttttgttgatgtattttctctttatt 8640  T

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Target: scaffold0414 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0414
Description:

Target: scaffold0414; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 104
Target Start/End: Complemental strand, 6958 - 6862
Alignment:
Q  11 cttcaggagcagttcttttcagacgc-tttaagctt-cctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtcaaa 104  Q
    |||||||||||||| | ||||||||| ||||||||| |||||||||||||   ||| |||| || |||||||| ||  |||||||||||||||||||    
T  6958 cttcaggagcagttttcttcagacgcttttaagcttccctttttgttgatgtgtttgctctttatttgttcttccaagacctttttaagatgtcaaa 6862  T

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Target: scaffold0045 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 104
Target Start/End: Complemental strand, 87420 - 87325
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtcaaa 104  Q
    |||||||||||||| | |||||||||||||||||| |||||||| ||||  | || |||| || |||||||||||  |||  ||||||||||||||    
T  87420 cttcaggagcagttttcttcagacgctttaagcttccctttttgctgatatacttgctctttatttgttctttcaagaccaatttaagatgtcaaa 87325  T

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Target: scaffold0261 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 5773 - 5695
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 89  Q
    ||||| ||||| || | |||||| |||| || |||||||||||||||||| ||  |||||| |||||||| ||||||||    
T  5773 cttcatgagcacttttcttcagatgcttcaaacttcctttttgttgattccttagctctcttttgttcttccagaacct 5695  T

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Target: scaffold0193 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 16066 - 16120
Alignment:
Q  6 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattc 60  Q
    |||| |||||||||||  ||| |||||| |||| |||||||||||||||||||||    
T  16066 tttgacttcaggagcacatctcttcagatgcttcaagcttcctttttgttgattc 16120  T

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Target: scaffold0047 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 80
Target Start/End: Original strand, 30507 - 30581
Alignment:
Q  6 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctt 80  Q
    |||||||||||||||| |||  |||||| |||| ||| || |||||||||||||  ||| |||||| ||||||||    
T  30507 tttgtcttcaggagcacttcgcttcagatgcttcaagttttctttttgttgatttctttgctctcttttgttctt 30581  T

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Target: scaffold0395 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 89
Target Start/End: Complemental strand, 13352 - 13275
Alignment:
Q  12 ttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 89  Q
    |||||||||| |||| |||||| |||| ||||||| ||||||||||||| ||  || ||| ||| | |||||||||||    
T  13352 ttcaggagcacttctcttcagatgcttcaagcttcttttttgttgattctttagctttcttttggtttttcagaacct 13275  T

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Target: scaffold0324 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 11 - 60
Target Start/End: Original strand, 10229 - 10278
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattc 60  Q
    ||||||||||| || | ||||||||||| |||||||||||||||| ||||    
T  10229 cttcaggagcacttttcttcagacgcttcaagcttcctttttgtttattc 10278  T

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Target: scaffold0249 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 58
Target Start/End: Complemental strand, 17592 - 17544
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagctt-cctttttgttgat 58  Q
    |||||||| ||||| | |||||||||||||||||| |||||||||||||    
T  17592 cttcaggatcagttttcttcagacgctttaagcttccctttttgttgat 17544  T

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Target: scaffold0011 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 58
Target Start/End: Complemental strand, 65246 - 65198
Alignment:
Q  11 cttcaggagcagttcttttcagacgctttaagctt-cctttttgttgat 58  Q
    |||||| ||||||| | |||||||||||||||||| |||||||||||||    
T  65246 cttcagaagcagttttcttcagacgctttaagcttccctttttgttgat 65198  T

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