View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8524_high_11 (Length: 330)

Name: NF8524_high_11
Description: NF8524
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8524_high_11
NF8524_high_11
[»] chr3 (31 HSPs)
chr3 (112-321)||(39901473-39901681)
chr3 (228-296)||(26550235-26550303)
chr3 (225-268)||(38363254-38363297)
chr3 (221-289)||(27168694-27168762)
chr3 (234-321)||(9326965-9327052)
chr3 (226-289)||(16267910-16267972)
chr3 (229-296)||(19150324-19150391)
chr3 (228-289)||(28920062-28920123)
chr3 (235-271)||(32596193-32596229)
chr3 (228-268)||(39350605-39350645)
chr3 (234-297)||(40419647-40419709)
chr3 (234-289)||(42477965-42478019)
chr3 (234-289)||(48789331-48789386)
chr3 (238-296)||(26772376-26772434)
chr3 (234-296)||(33939240-33939301)
chr3 (234-288)||(37754451-37754504)
chr3 (234-296)||(38693573-38693634)
chr3 (18-48)||(39901401-39901431)
chr3 (234-296)||(42672840-42672902)
chr3 (238-296)||(43143524-43143582)
chr3 (234-296)||(49021715-49021777)
chr3 (227-296)||(7220-7288)
chr3 (227-296)||(37894248-37894317)
chr3 (234-279)||(51137058-51137103)
chr3 (228-296)||(288723-288791)
chr3 (229-313)||(11225116-11225200)
chr3 (229-293)||(20096429-20096492)
chr3 (229-316)||(27646497-27646584)
chr3 (229-319)||(41448161-41448248)
chr3 (234-289)||(44027143-44027196)
chr3 (228-296)||(48405408-48405476)
[»] chr5 (30 HSPs)
chr5 (234-296)||(26686885-26686947)
chr5 (234-296)||(26956616-26956678)
chr5 (234-296)||(3674854-3674916)
chr5 (227-296)||(5996664-5996732)
chr5 (228-296)||(1079958-1080025)
chr5 (229-305)||(6940146-6940222)
chr5 (229-296)||(11880993-11881059)
chr5 (229-297)||(27005482-27005551)
chr5 (234-296)||(6538874-6538935)
chr5 (234-296)||(11432628-11432689)
chr5 (226-296)||(11954427-11954497)
chr5 (226-296)||(19844314-19844384)
chr5 (234-275)||(8681847-8681888)
chr5 (227-296)||(29803222-29803290)
chr5 (228-321)||(30838345-30838438)
chr5 (234-298)||(38097783-38097847)
chr5 (234-321)||(43170436-43170523)
chr5 (229-321)||(844035-844124)
chr5 (234-321)||(2629822-2629911)
chr5 (234-296)||(13309886-13309948)
chr5 (234-296)||(30103457-30103518)
chr5 (226-296)||(31626082-31626151)
chr5 (228-314)||(35464571-35464656)
chr5 (234-296)||(40829418-40829480)
chr5 (227-296)||(611861-611930)
chr5 (228-268)||(2429008-2429048)
chr5 (229-297)||(3154648-3154715)
chr5 (234-294)||(6529023-6529082)
chr5 (229-305)||(18695317-18695393)
chr5 (228-296)||(20985535-20985602)
[»] chr2 (41 HSPs)
chr2 (226-321)||(22966782-22966877)
chr2 (234-319)||(12994689-12994773)
chr2 (234-321)||(31629608-31629695)
chr2 (229-291)||(1907774-1907836)
chr2 (234-296)||(4952485-4952547)
chr2 (228-318)||(9979094-9979184)
chr2 (234-296)||(40210073-40210135)
chr2 (227-296)||(8352832-8352900)
chr2 (228-296)||(5427228-5427296)
chr2 (234-290)||(8805234-8805289)
chr2 (234-294)||(12784406-12784466)
chr2 (226-321)||(28481777-28481870)
chr2 (229-281)||(28494858-28494910)
chr2 (234-294)||(45693476-45693535)
chr2 (234-269)||(3771375-3771410)
chr2 (234-296)||(5361799-5361859)
chr2 (234-304)||(5962642-5962711)
chr2 (234-319)||(6328671-6328756)
chr2 (234-268)||(17917393-17917427)
chr2 (234-296)||(18876927-18876989)
chr2 (235-265)||(33846946-33846976)
chr2 (234-296)||(39147769-39147831)
chr2 (227-269)||(40358144-40358186)
chr2 (226-296)||(41353503-41353572)
chr2 (237-295)||(45420142-45420200)
chr2 (236-273)||(3358579-3358616)
chr2 (229-314)||(43820728-43820813)
chr2 (228-296)||(1052502-1052569)
chr2 (229-269)||(4319768-4319808)
chr2 (228-296)||(5031921-5031989)
chr2 (234-317)||(9695045-9695128)
chr2 (225-269)||(18531596-18531640)
chr2 (228-296)||(18737879-18737947)
chr2 (228-296)||(24766150-24766218)
chr2 (234-294)||(26481097-26481157)
chr2 (234-322)||(28544035-28544123)
chr2 (229-297)||(30192356-30192423)
chr2 (234-317)||(33857221-33857304)
chr2 (236-296)||(37003617-37003676)
chr2 (273-321)||(40602370-40602418)
chr2 (229-297)||(44484661-44484728)
[»] scaffold1625 (1 HSPs)
scaffold1625 (228-321)||(761-854)
[»] chr8 (31 HSPs)
chr8 (224-321)||(11728013-11728110)
chr8 (234-293)||(39031220-39031279)
chr8 (236-321)||(14127250-14127335)
chr8 (226-319)||(30170711-30170804)
chr8 (234-297)||(10344328-10344390)
chr8 (234-297)||(43186300-43186362)
chr8 (234-296)||(14548829-14548890)
chr8 (226-296)||(45405527-45405597)
chr8 (228-308)||(13592764-13592844)
chr8 (228-296)||(24798363-24798431)
chr8 (229-296)||(6972154-6972221)
chr8 (236-287)||(10128647-10128698)
chr8 (228-286)||(35792067-35792125)
chr8 (234-296)||(37942912-37942974)
chr8 (234-296)||(41406862-41406923)
chr8 (226-296)||(43285968-43286038)
chr8 (227-296)||(2730966-2731035)
chr8 (227-296)||(10692436-10692504)
chr8 (228-293)||(12655920-12655985)
chr8 (234-295)||(31806303-31806363)
chr8 (227-296)||(33605083-33605152)
chr8 (227-296)||(35067157-35067226)
chr8 (227-296)||(35564286-35564355)
chr8 (226-267)||(36023080-36023121)
chr8 (228-296)||(6440079-6440147)
chr8 (234-317)||(14228711-14228794)
chr8 (224-260)||(29107989-29108025)
chr8 (228-296)||(30608714-30608781)
chr8 (234-294)||(35153019-35153079)
chr8 (277-321)||(37568696-37568740)
chr8 (228-296)||(42716318-42716385)
[»] chr6 (18 HSPs)
chr6 (228-296)||(16368052-16368120)
chr6 (224-314)||(31204797-31204887)
chr6 (234-321)||(10840722-10840809)
chr6 (226-296)||(2242027-2242097)
chr6 (234-296)||(16743272-16743333)
chr6 (226-296)||(30423600-30423670)
chr6 (227-296)||(8505779-8505848)
chr6 (227-296)||(11785352-11785420)
chr6 (224-316)||(17417220-17417312)
chr6 (228-296)||(16337928-16337996)
chr6 (224-296)||(33651014-33651086)
chr6 (229-268)||(26396508-26396547)
chr6 (234-296)||(11635540-11635602)
chr6 (226-296)||(17551384-17551454)
chr6 (234-296)||(27612879-27612940)
chr6 (234-296)||(34570600-34570662)
chr6 (229-289)||(7636440-7636500)
chr6 (234-294)||(17182103-17182163)
[»] chr4 (45 HSPs)
chr4 (225-321)||(961271-961367)
chr4 (228-317)||(53662412-53662501)
chr4 (234-321)||(13140283-13140368)
chr4 (228-296)||(39158103-39158171)
chr4 (229-296)||(9472519-9472585)
chr4 (234-296)||(336813-336874)
chr4 (238-296)||(5466501-5466558)
chr4 (227-305)||(42815401-42815479)
chr4 (226-296)||(44257735-44257805)
chr4 (227-321)||(54222037-54222131)
chr4 (229-302)||(20056395-20056467)
chr4 (228-321)||(35748644-35748737)
chr4 (228-296)||(49584992-49585060)
chr4 (234-298)||(52372195-52372259)
chr4 (228-308)||(52697481-52697560)
chr4 (229-296)||(2004194-2004261)
chr4 (234-305)||(3078904-3078975)
chr4 (234-321)||(32871809-32871896)
chr4 (234-297)||(32901333-32901395)
chr4 (234-297)||(40721969-40722031)
chr4 (226-289)||(47288078-47288141)
chr4 (229-296)||(51107447-51107513)
chr4 (234-281)||(54251471-54251517)
chr4 (234-296)||(149490-149552)
chr4 (234-296)||(2738273-2738335)
chr4 (238-296)||(17805460-17805517)
chr4 (252-294)||(18624227-18624269)
chr4 (227-269)||(20760252-20760294)
chr4 (227-269)||(20766643-20766685)
chr4 (226-296)||(33820342-33820411)
chr4 (234-296)||(40308445-40308506)
chr4 (234-288)||(42135474-42135528)
chr4 (235-289)||(52263891-52263945)
chr4 (226-291)||(21392566-21392631)
chr4 (227-296)||(38864741-38864810)
chr4 (229-294)||(40629348-40629412)
chr4 (227-296)||(44272816-44272884)
chr4 (228-293)||(44496003-44496067)
chr4 (228-269)||(52204848-52204889)
chr4 (234-317)||(8680945-8681028)
chr4 (228-296)||(12241056-12241123)
chr4 (228-288)||(20381349-20381409)
chr4 (228-296)||(29577442-29577509)
chr4 (224-296)||(31559532-31559604)
chr4 (279-319)||(45652690-45652730)
[»] chr1 (44 HSPs)
chr1 (228-296)||(30535989-30536057)
chr1 (234-294)||(44723364-44723424)
chr1 (234-305)||(46281440-46281511)
chr1 (228-314)||(35883594-35883680)
chr1 (234-296)||(49931557-49931619)
chr1 (226-296)||(50775162-50775232)
chr1 (228-296)||(32216000-32216067)
chr1 (229-296)||(1689390-1689457)
chr1 (225-321)||(42577467-42577565)
chr1 (234-269)||(45430803-45430838)
chr1 (234-296)||(47113278-47113339)
chr1 (265-321)||(2279302-2279358)
chr1 (228-296)||(26547232-26547299)
chr1 (229-289)||(35846890-35846949)
chr1 (227-317)||(1156476-1156566)
chr1 (234-281)||(31974724-31974771)
chr1 (234-269)||(33173723-33173758)
chr1 (234-297)||(43056720-43056782)
chr1 (234-269)||(45863753-45863788)
chr1 (234-320)||(1922406-1922492)
chr1 (226-296)||(4213068-4213138)
chr1 (234-296)||(5043096-5043157)
chr1 (234-296)||(5771753-5771815)
chr1 (229-271)||(26101393-26101435)
chr1 (234-296)||(29359643-29359704)
chr1 (227-289)||(36750495-36750557)
chr1 (229-287)||(39128409-39128466)
chr1 (234-268)||(42615864-42615898)
chr1 (234-268)||(48325226-48325260)
chr1 (234-296)||(49621367-49621428)
chr1 (234-296)||(52437498-52437560)
chr1 (228-289)||(16987445-16987505)
chr1 (234-279)||(25672345-25672390)
chr1 (234-271)||(25994946-25994983)
chr1 (227-296)||(27352627-27352695)
chr1 (234-319)||(28501451-28501536)
chr1 (229-289)||(8905727-8905786)
chr1 (228-296)||(23554749-23554816)
chr1 (229-289)||(26501294-26501353)
chr1 (226-317)||(29632430-29632521)
chr1 (228-296)||(35369698-35369765)
chr1 (228-296)||(44672036-44672103)
chr1 (229-297)||(51193136-51193203)
chr1 (234-298)||(51231309-51231373)
[»] chr7 (29 HSPs)
chr7 (227-296)||(47012575-47012644)
chr7 (226-305)||(46829475-46829554)
chr7 (227-322)||(48395245-48395340)
chr7 (228-293)||(42552897-42552962)
chr7 (228-308)||(2849512-2849594)
chr7 (229-296)||(28249575-28249642)
chr7 (234-289)||(31467269-31467324)
chr7 (234-293)||(32529863-32529921)
chr7 (234-289)||(43159587-43159642)
chr7 (234-321)||(47925341-47925428)
chr7 (234-296)||(6269370-6269432)
chr7 (234-321)||(7212643-7212734)
chr7 (234-296)||(7295454-7295516)
chr7 (234-296)||(17039161-17039222)
chr7 (234-296)||(21153054-21153115)
chr7 (235-321)||(22588941-22589027)
chr7 (234-296)||(26018044-26018106)
chr7 (234-296)||(35212961-35213022)
chr7 (234-296)||(44496808-44496870)
chr7 (235-268)||(21588958-21588991)
chr7 (234-279)||(34690946-34690991)
chr7 (228-297)||(43255572-43255640)
chr7 (225-289)||(2300074-2300138)
chr7 (224-256)||(19510391-19510423)
chr7 (234-297)||(29723931-29723995)
chr7 (234-286)||(33057383-33057435)
chr7 (224-296)||(34978290-34978362)
chr7 (225-297)||(37385238-37385309)
chr7 (229-297)||(38990100-38990167)
[»] scaffold0163 (1 HSPs)
scaffold0163 (234-293)||(5923-5982)
[»] scaffold0522 (1 HSPs)
scaffold0522 (234-317)||(2488-2571)
[»] scaffold0178 (1 HSPs)
scaffold0178 (233-321)||(11533-11621)
[»] scaffold0201 (1 HSPs)
scaffold0201 (234-296)||(8476-8538)
[»] scaffold0056 (1 HSPs)
scaffold0056 (229-289)||(76632-76691)


Alignment Details
Target: chr3 (Bit Score: 137; Significance: 2e-71; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 112 - 321
Target Start/End: Original strand, 39901473 - 39901681
Alignment:
Q  112 cttttctcaataggcataacgagggtgacttgttatttgattgcacgattgcaannnnnnncttctttcattgttaagcctatctagaaaaagaagaaaa 211  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||| |||       |||| ||||||||||||||||||||||||||||||||||    
T  39901473 cttttctcaataggcataacgagggtgacttgttatttgattatacgattccaatttttttcttcgttcattgttaagcctatctagaaaaagaagaaaa 39901572  T
Q  212 aatggacaatacttaaaagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacatgtgattttattcact 311  Q
    ||| | ||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| | |||||||| ||||||||||    
T  39901573 aatcgtcaatacttaaaagagaaatgatatttgtacaatcattttttgataatttttggaacaactttctatctcatactaacatgtga-tttattcact 39901671  T
Q  312 ctcttcttct 321  Q
    ||||||||||    
T  39901672 ctcttcttct 39901681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 228 - 296
Target Start/End: Original strand, 26550235 - 26550303
Alignment:
Q  228 aagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    ||||| ||||||||||| ||||  ||||||||||||||||||  |||||||||| ||||||||||||||    
T  26550235 aagagaaatgatatttgcacaaccattttttaataatttttgtgacaactttctctctcatattcacat 26550303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 38363297 - 38363254
Alignment:
Q  225 taaaagagcaatgatatttgtacaattattttttaataattttt 268  Q
    |||||||| |||||||||||||||||||||||||||||||||||    
T  38363297 taaaagagaaatgatatttgtacaattattttttaataattttt 38363254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 221 - 289
Target Start/End: Complemental strand, 27168762 - 27168694
Alignment:
Q  221 tacttaaaagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcata 289  Q
    ||||| |||||| ||||||||||| ||||  ||||||||||||||||||  |||||||||| |||||||    
T  27168762 tacttcaaagagaaatgatatttgaacaaccattttttaataatttttgtgacaactttctctctcata 27168694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 234 - 321
Target Start/End: Complemental strand, 9327052 - 9326965
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacatgtgattttattcactctcttcttct 321  Q
    ||||||||||||||||| | ||||  | || ||||| ||||||  ||||||||||| ||||||||  |||||||| ||||||||||||    
T  9327052 aatgatatttgtacaatcaattttcgacaacttttgaaacaaccatctatctcatactcacatgtctttttattctctctcttcttct 9326965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 289
Target Start/End: Complemental strand, 16267972 - 16267910
Alignment:
Q  226 aaaagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcata 289  Q
    ||||||| ||||||||||||| ||| ||||| ||||||||||| |||||||||||| |||||||    
T  16267972 aaaagagaaatgatatttgtataatcattttctaataattttt-gaacaactttctctctcata 16267910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 229 - 296
Target Start/End: Complemental strand, 19150391 - 19150324
Alignment:
Q  229 agagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    |||| ||||||||||||||||| ||||||||| || |||||  |||||||||| ||||||||| ||||    
T  19150391 agagaaatgatatttgtacaatcattttttaacaacttttgtgacaactttctctctcatatttacat 19150324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 228 - 289
Target Start/End: Complemental strand, 28920123 - 28920062
Alignment:
Q  228 aagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcata 289  Q
    ||||| |||||||||||||||| |||||  ||||||||||||  |||||||||| |||||||    
T  28920123 aagagaaatgatatttgtacaactatttgataataatttttgtgacaactttctctctcata 28920062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 271
Target Start/End: Complemental strand, 32596229 - 32596193
Alignment:
Q  235 atgatatttgtacaattattttttaataatttttgga 271  Q
    |||||||||||||||||||||| ||||||||||||||    
T  32596229 atgatatttgtacaattattttgtaataatttttgga 32596193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 268
Target Start/End: Complemental strand, 39350645 - 39350605
Alignment:
Q  228 aagagcaatgatatttgtacaattattttttaataattttt 268  Q
    ||||| ||||||||||||||||||||||||||| |||||||    
T  39350645 aagagaaatgatatttgtacaattattttttaacaattttt 39350605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 234 - 297
Target Start/End: Complemental strand, 40419709 - 40419647
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacatg 297  Q
    ||||||||||||||||| ||||| | ||||||||| | |||| ||||| |||||||||||||||    
T  40419709 aatgatatttgtacaatcattttgtgataatttttag-acaattttctctctcatattcacatg 40419647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 234 - 289
Target Start/End: Original strand, 42477965 - 42478019
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcata 289  Q
    ||||||||||| ||||||||||||| ||||||||||  |||||||||||| |||||    
T  42477965 aatgatatttgaacaattatttttt-ataatttttgtgacaactttctatttcata 42478019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 234 - 289
Target Start/End: Original strand, 48789331 - 48789386
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcata 289  Q
    ||||||||||| ||||||||||| | ||||||||||  |||||||| |||||||||    
T  48789331 aatgatatttgaacaattattttctgataatttttgtgacaactttttatctcata 48789386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 296
Target Start/End: Original strand, 26772376 - 26772434
Alignment:
Q  238 atatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    ||||||| ||||  ||||| ||||||||||||  |||||||||| ||||||||||||||    
T  26772376 atatttgaacaaccattttataataatttttgtgacaactttctctctcatattcacat 26772434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 296
Target Start/End: Original strand, 33939240 - 33939301
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    ||||||||||| ||||  |||||||| |||||||||  |||||||||| ||||||||||||||    
T  33939240 aatgatatttgaacaaccatttttta-taatttttgtgacaactttctctctcatattcacat 33939301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 288
Target Start/End: Original strand, 37754451 - 37754504
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcat 288  Q
    |||||||||||||||  |||||| ||||||||||||| |||||||||| ||||||    
T  37754451 aatgatatttgtacatctattttataataatttttgg-acaactttctctctcat 37754504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 296
Target Start/End: Complemental strand, 38693634 - 38693573
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    ||||||||||| ||||||||| | | ||||||||||| |||| ||||| ||||||||||||||    
T  38693634 aatgatatttgcacaattattatgtgataatttttgg-acaattttctctctcatattcacat 38693573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 48
Target Start/End: Original strand, 39901401 - 39901431
Alignment:
Q  18 ctatttaatttgaatttgaagtatttagtgc 48  Q
    |||||||||||||||||||||||||||||||    
T  39901401 ctatttaatttgaatttgaagtatttagtgc 39901431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 296
Target Start/End: Complemental strand, 42672902 - 42672840
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    ||||||||||| |||| |||||||| ||||||||||  |||| ||| | ||||||||||||||    
T  42672902 aatgatatttgcacaactattttttgataatttttgtgacaaatttttctctcatattcacat 42672840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 296
Target Start/End: Original strand, 43143524 - 43143582
Alignment:
Q  238 atatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    ||||||||||||||||||||||  ||||||||  |||| ||||| ||||||||| ||||    
T  43143524 atatttgtacaattattttttatcaatttttgtgacaattttctctctcatatttacat 43143582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 296
Target Start/End: Original strand, 49021715 - 49021777
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    |||||||||||||||   |||||||||||| |||||  |||||||||| ||||||| ||||||    
T  49021715 aatgatatttgtacatccattttttaataacttttgtgacaactttctttctcatactcacat 49021777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 296
Target Start/End: Complemental strand, 7288 - 7220
Alignment:
Q  227 aaagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    |||||| ||||||||||||||||| ||||| | | || |||||| |||||||||| ||||||| ||||||    
T  7288 aaagagaaatgatatttgtacaatcattttctgacaacttttgg-acaactttctctctcatactcacat 7220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 296
Target Start/End: Complemental strand, 37894317 - 37894248
Alignment:
Q  227 aaagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    |||||| ||||||||||||||||  ||||| ||| || |||||  |||||||||| ||||||| ||||||    
T  37894317 aaagagaaatgatatttgtacaaccattttctaacaacttttgtgacaactttctctctcatactcacat 37894248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 279
Target Start/End: Complemental strand, 51137103 - 51137058
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaacttt 279  Q
    |||||||||||||||| ||||||||||||| |||||  ||||||||    
T  51137103 aatgatatttgtacaactattttttaataacttttgtgacaacttt 51137058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 296
Target Start/End: Original strand, 288723 - 288791
Alignment:
Q  228 aagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    ||||| ||||||||||| ||||  ||||||| |||| |||||  |||||||||| ||||||| ||||||    
T  288723 aagagaaatgatatttgaacaacaatttttttataacttttgtgacaactttctctctcatactcacat 288791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 313
Target Start/End: Complemental strand, 11225200 - 11225116
Alignment:
Q  229 agagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacatgtgattttattcactct 313  Q
    |||| |||||||||||||| |||||||||| |||| ||| | || ||||| || ||||||| ||| || || |||||||| ||||    
T  11225200 agagaaatgatatttgtacgattattttttgataactttcgaaataacttcctctctcatactcatatatgtttttattctctct 11225116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 293
Target Start/End: Complemental strand, 20096492 - 20096429
Alignment:
Q  229 agagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattca 293  Q
    |||| ||||||||||||| ||||||||| | ||||| ||| | |||||||||| |||||||||||    
T  20096492 agagaaatgatatttgtataattattttatgataatattttg-acaactttctctctcatattca 20096429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 316
Target Start/End: Original strand, 27646497 - 27646584
Alignment:
Q  229 agagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcaca-tgtgattttattcactctctt 316  Q
    |||| ||||||||||||||||| |||||  |||||||||||| |||||||| | ||||||  ||||| | || |||||||| |||||||    
T  27646497 agagaaatgatatttgtacaatcattttgcaataatttttgg-acaactttatctctcatgctcacattatgtttttattctctctctt 27646584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 319
Target Start/End: Complemental strand, 41448248 - 41448161
Alignment:
Q  229 agagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacatgtgattttattcactctcttctt 319  Q
    |||| ||||||||||||||||  |||||| || || ||||| ||||||  ||| ||||||| |||||||   |||||||| ||||||||||    
T  41448248 agagaaatgatatttgtacaaccatttttaaacaacttttgaaacaaccctctctctcatactcacatg---ttttattctctctcttctt 41448161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 234 - 289
Target Start/End: Complemental strand, 44027196 - 44027143
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcata 289  Q
    |||||||||||||||| |||||| ||||| ||||||  |||||||||| |||||||    
T  44027196 aatgatatttgtacaactattttataatattttttg--acaactttctctctcata 44027143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 296
Target Start/End: Original strand, 48405408 - 48405476
Alignment:
Q  228 aagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    ||||| ||||||||||||||||  ||||| | | || ||||| ||||||||||| ||||||| ||||||    
T  48405408 aagagaaatgatatttgtacaaccattttgtgacaacttttgtaacaactttctctctcatactcacat 48405476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 8e-18; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 234 - 296
Target Start/End: Original strand, 26686885 - 26686947
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    |||||||||| |||||||||||||||||||||||||  |||||||||| ||||||||||||||    
T  26686885 aatgatatttatacaattattttttaataatttttgtgacaactttctctctcatattcacat 26686947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 234 - 296
Target Start/End: Original strand, 26956616 - 26956678
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    |||||||||| |||||||||||||||||||||||||  |||||||||| ||||||||||||||    
T  26956616 aatgatatttatacaattattttttaataatttttgtgacaactttctctctcatattcacat 26956678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 234 - 296
Target Start/End: Complemental strand, 3674916 - 3674854
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    |||||||||||||||||||||| || ||||||||||| |||||||||| ||| ||| ||||||    
T  3674916 aatgatatttgtacaattatttcttgataatttttgggacaactttctctcttatactcacat 3674854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 296
Target Start/End: Original strand, 5996664 - 5996732
Alignment:
Q  227 aaagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    |||||| |||||||||||||||| |||||||||| ||||||| | |||| ||||| ||||||||||||||    
T  5996664 aaagagaaatgatatttgtacaactattttttaacaatttttag-acaattttctctctcatattcacat 5996732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 228 - 296
Target Start/End: Complemental strand, 1080025 - 1079958
Alignment:
Q  228 aagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    ||||| ||||||||||| ||||||||||||| | ||||||||  |||||||||| ||||||||||||||    
T  1080025 aagagaaatgatatttgaacaattatttttt-acaatttttgtgacaactttctctctcatattcacat 1079958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 229 - 305
Target Start/End: Complemental strand, 6940222 - 6940146
Alignment:
Q  229 agagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacatgtgatttta 305  Q
    |||| ||||||||||||||||  ||||| ||||||||||||  |||||||||| ||||||| |||||| || |||||    
T  6940222 agagaaatgatatttgtacaaccattttataataatttttgtgacaactttctctctcatactcacatatgttttta 6940146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 229 - 296
Target Start/End: Complemental strand, 11881059 - 11880993
Alignment:
Q  229 agagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    |||| ||||||||||||||||||||||||||| || |||| | |||||||||| ||||||| ||||||    
T  11881059 agagaaatgatatttgtacaattattttttaacaacttttag-acaactttctctctcatactcacat 11880993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 229 - 297
Target Start/End: Complemental strand, 27005551 - 27005482
Alignment:
Q  229 agagcaatgatatttgtacaattattttttaataatttttggaacaactt--tctatctcatattcacatg 297  Q
    |||| ||||||||||||||||||||||||| ||||||||| | |||||||  ||| |||||||||||||||    
T  27005551 agagaaatgatatttgtacaattattttttgataattttt-gtacaactttatctctctcatattcacatg 27005482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 234 - 296
Target Start/End: Original strand, 6538874 - 6538935
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    ||||||||||||||||||||||| | ||||||||| | |||||||||| | ||||||||||||    
T  6538874 aatgatatttgtacaattattttgtgataattttttg-acaactttctctttcatattcacat 6538935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 234 - 296
Target Start/End: Original strand, 11432628 - 11432689
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    ||||||| ||||||||| ||||||  ||||||||||| |||||||||||||| ||||||||||    
T  11432628 aatgatagttgtacaatcatttttgtataatttttgg-acaactttctatcttatattcacat 11432689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 226 - 296
Target Start/End: Original strand, 11954427 - 11954497
Alignment:
Q  226 aaaagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    ||||||| ||||||||||| |||| |||| ||| ||||||||||  |||||||||| ||||||| ||||||    
T  11954427 aaaagagaaatgatatttgaacaactattgttttataatttttgtgacaactttctctctcatactcacat 11954497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 226 - 296
Target Start/End: Complemental strand, 19844384 - 19844314
Alignment:
Q  226 aaaagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    ||||||| |||||||||||||||| |||||||| |||| |||||  | |||||||| |||||||| |||||    
T  19844384 aaaagagaaatgatatttgtacaactattttttgataacttttgtgataactttctctctcatatccacat 19844314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 234 - 275
Target Start/End: Original strand, 8681847 - 8681888
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaa 275  Q
    ||||||||||||||||| ||||||| ||||||||||||||||    
T  8681847 aatgatatttgtacaatcattttttgataatttttggaacaa 8681888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 227 - 296
Target Start/End: Original strand, 29803222 - 29803290
Alignment:
Q  227 aaagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    |||||| |||||||||||||||| |||||||| | || ||||  ||||||||||| ||||||||||||||    
T  29803222 aaagagaaatgatatttgtacaactattttttgacaactttt-aaacaactttctctctcatattcacat 29803290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 228 - 321
Target Start/End: Complemental strand, 30838438 - 30838345
Alignment:
Q  228 aagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacatgtgattttattcactctcttcttct 321  Q
    ||||| |||||||||||||||  || ||||| | || ||||| ||||||  ||| ||||||| ||||||||| |||||||| ||| ||||||||    
T  30838438 aagagaaatgatatttgtacatctactttttgacaacttttgaaacaaccatctctctcatactcacatgtgtttttattctctcccttcttct 30838345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 298
Target Start/End: Original strand, 38097783 - 38097847
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacatgt 298  Q
    |||||||| |||||||||||||||||| || ||||| ||||| | ||| ||||||| ||||||||    
T  38097783 aatgatatctgtacaattattttttaacaacttttgaaacaattatctctctcatactcacatgt 38097847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 234 - 321
Target Start/End: Original strand, 43170436 - 43170523
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacatgtgattttattcactctcttcttct 321  Q
    |||||||||||||||| || ||||| | ||||||| ||| ||| || ||||||||  | |||| || |||||||| ||||||||||||    
T  43170436 aatgatatttgtacaactactttttgacaatttttagaataacattttatctcatgcttacatatgtttttattctctctcttcttct 43170523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 321
Target Start/End: Original strand, 844035 - 844124
Alignment:
Q  229 agagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacatgtgattttattcactctcttcttct 321  Q
    |||| ||||||||||| ||||  ||||||| | || ||||| |||||   ||| |||||||||||||||||  ||||||| ||||||||||||    
T  844035 agagaaatgatatttgcacaaccattttttgacaacttttgaaacaa---tctctctcatattcacatgtgtatttattctctctcttcttct 844124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 321
Target Start/End: Original strand, 2629822 - 2629911
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctc--atattcacatgtgattttattcactctcttcttct 321  Q
    ||||||||||||||||  ||||||| | || ||||| |||||| |||| ||||  ||||||||||||  |||||||| ||||||| ||||    
T  2629822 aatgatatttgtacaaccattttttgacaacttttgaaacaaccttctctctctcatattcacatgtttttttattctctctctttttct 2629911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 296
Target Start/End: Original strand, 13309886 - 13309948
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    ||||||||||| |||| |||||||| | ||||||||  | |||||||| ||||||||||||||    
T  13309886 aatgatatttgaacaactattttttgacaatttttgtgataactttctctctcatattcacat 13309948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 296
Target Start/End: Complemental strand, 30103518 - 30103457
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    ||||||||||||||||| ||||||  ||||||||| | |||| ||||| ||||||||||||||    
T  30103518 aatgatatttgtacaatcatttttgtataattttt-gtacaattttctctctcatattcacat 30103457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 296
Target Start/End: Complemental strand, 31626151 - 31626082
Alignment:
Q  226 aaaagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    ||||||| ||||||||||||||||| |||||   ||||||||| | |||||||| ||||||||| ||||||    
T  31626151 aaaagagaaatgatatttgtacaatcattttggtataattttt-gtacaactttttatctcatactcacat 31626082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 314
Target Start/End: Complemental strand, 35464656 - 35464571
Alignment:
Q  228 aagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacatgtgattttattcactctc 314  Q
    ||||| |||||||||||||| |||||||||| ||||||||| |||||| ||||| | | ||| ||||| ||  |||||||| |||||    
T  35464656 aagagaaatgatatttgtacgattattttttgataattttt-gaacaattttctcttttatactcacacgtctttttattctctctc 35464571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 296
Target Start/End: Original strand, 40829418 - 40829480
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    ||||||||||||||||  ||||||||||||||||||  |||| ||| | ||||||| ||||||    
T  40829418 aatgatatttgtacaaccattttttaataatttttgtgacaattttttctctcatactcacat 40829480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 296
Target Start/End: Original strand, 611861 - 611930
Alignment:
Q  227 aaagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    |||||| ||||||||||| ||||||| ||||| | || |||||  |||||||||| ||||||| ||||||    
T  611861 aaagagaaatgatatttgaacaattactttttgacaacttttgtgacaactttctctctcatactcacat 611930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 268
Target Start/End: Original strand, 2429008 - 2429048
Alignment:
Q  228 aagagcaatgatatttgtacaattattttttaataattttt 268  Q
    ||||| |||||| |||||||||||||||||| |||||||||    
T  2429008 aagagaaatgatttttgtacaattattttttgataattttt 2429048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 297
Target Start/End: Complemental strand, 3154715 - 3154648
Alignment:
Q  229 agagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacatg 297  Q
    |||| |||||||||||||||| |||||| | |||| |||| | |||||||||| ||||||| |||||||    
T  3154715 agagtaatgatatttgtacaactattttatgataactttt-gtacaactttctctctcataatcacatg 3154648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 234 - 294
Target Start/End: Original strand, 6529023 - 6529082
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcac 294  Q
    ||||||||||||||||||||||| ||| ||||||| | |||||||| | ||||||| ||||    
T  6529023 aatgatatttgtacaattattttctaacaattttttg-acaactttttctctcatactcac 6529082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 305
Target Start/End: Original strand, 18695317 - 18695393
Alignment:
Q  229 agagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacatgtgatttta 305  Q
    |||| ||||||||||||||||  ||||| ||| || |||||  |||||||||| ||||||| |||||| || |||||    
T  18695317 agagaaatgatatttgtacaaccattttgtaacaacttttgtgacaactttctctctcatactcacatatgttttta 18695393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 296
Target Start/End: Complemental strand, 20985602 - 20985535
Alignment:
Q  228 aagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    ||||| ||||||||||||||||  ||||||  ||||||||| | |||||||||| ||||||| ||||||    
T  20985602 aagagaaatgatatttgtacaaccatttttgtataattttt-gtacaactttctctctcatactcacat 20985535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 5e-16; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 226 - 321
Target Start/End: Original strand, 22966782 - 22966877
Alignment:
Q  226 aaaagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacatgtgattttattcactctcttcttct 321  Q
    ||||||| ||||||||||||||||  | ||||| |||| ||||| ||||||  ||| ||||||||||||||||| |||||||| ||||||| ||||    
T  22966782 aaaagagaaatgatatttgtacaaccactttttgataacttttgaaacaaccctctctctcatattcacatgtgtttttattctctctctttttct 22966877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 234 - 319
Target Start/End: Complemental strand, 12994773 - 12994689
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacatg-tgattttattcactctcttctt 319  Q
    ||||||||||||||||||||||||| ||||||||   |||| |||||||||||||| ||||||| || | |||||| ||||||||||    
T  12994773 aatgatatttgtacaattattttttgataatttt--aaacagctttctatctcatagtcacatgatgttattattctctctcttctt 12994689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 234 - 321
Target Start/End: Original strand, 31629608 - 31629695
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacatgtgattttattcactctcttcttct 321  Q
    |||||||||||||||| || ||||| | || ||||||||||||  ||| ||| ||| ||||||||| |||||||| ||||||||||||    
T  31629608 aatgatatttgtacaactactttttgacaacttttggaacaaccatctctctaatactcacatgtgtttttattctctctcttcttct 31629695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 291
Target Start/End: Complemental strand, 1907836 - 1907774
Alignment:
Q  229 agagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatatt 291  Q
    |||| ||| |||||||||||| |||||||||||||||||||  |||||||| | |||||||||    
T  1907836 agagaaataatatttgtacaactattttttaataatttttgtgacaactttatctctcatatt 1907774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 234 - 296
Target Start/End: Complemental strand, 4952547 - 4952485
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    ||||||||||| ||| ||||||  | |||||||||| ||||||||||||| ||||||||||||    
T  4952547 aatgatatttgaacatttatttagtgataatttttgcaacaactttctatttcatattcacat 4952485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 228 - 318
Target Start/End: Original strand, 9979094 - 9979184
Alignment:
Q  228 aagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacatgtgattttattcactctcttct 318  Q
    ||||| ||||||||||||||||  | ||||| | ||||||||  |||||  ||| ||||||| ||||||||| |||||||| |||||||||    
T  9979094 aagagaaatgatatttgtacaaccactttttcacaatttttgtgacaaccatctctctcatactcacatgtgtttttattctctctcttct 9979184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 234 - 296
Target Start/End: Complemental strand, 40210135 - 40210073
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    ||||||||||| |||| ||||||| |||||||||||  |||||||||| ||||||| ||||||    
T  40210135 aatgatatttgaacaactatttttaaataatttttgtgacaactttctctctcatactcacat 40210073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 227 - 296
Target Start/End: Original strand, 8352832 - 8352900
Alignment:
Q  227 aaagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    |||||| |||||||||||||||| ||||||||||||| |||| | |||| ||||| ||||||| ||||||    
T  8352832 aaagagaaatgatatttgtacaactattttttaataacttttag-acaattttctctctcatactcacat 8352900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 296
Target Start/End: Complemental strand, 5427296 - 5427228
Alignment:
Q  228 aagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    ||||| ||||||| ||||||||||| ||||| ||||||||||  ||||||| || ||| ||||||||||    
T  5427296 aagagaaatgataattgtacaattaatttttgataatttttgtgacaacttcctctcttatattcacat 5427228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 290
Target Start/End: Original strand, 8805234 - 8805289
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcatat 290  Q
    |||||||| ||||||| |||||| | ||||||||||| |||||||||||||||||||    
T  8805234 aatgatatatgtacaactattttatgataatttttgg-acaactttctatctcatat 8805289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 294
Target Start/End: Complemental strand, 12784466 - 12784406
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcac 294  Q
    ||||||||||||||||  ||||| ||||||||||||  |||||||||| ||||||| ||||    
T  12784466 aatgatatttgtacaaccattttataataatttttgtgacaactttctctctcatactcac 12784406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 321
Target Start/End: Original strand, 28481777 - 28481870
Alignment:
Q  226 aaaagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacatgtgattttattcactctcttcttct 321  Q
    ||||||| ||| ||||||| ||||  ||||||| | || ||||||||||||| |||  |||||| ||||||||| ||||||||  |||||||||||    
T  28481777 aaaagagaaataatatttgaacaaccattttttgacaacttttggaacaactctct--ctcatactcacatgtgtttttattctatctcttcttct 28481870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 281
Target Start/End: Original strand, 28494858 - 28494910
Alignment:
Q  229 agagcaatgatatttgtacaattattttttaataatttttggaacaactttct 281  Q
    |||| |||||||||||||||| ||||||| || || |||||||||||||||||    
T  28494858 agagaaatgatatttgtacaactatttttaaacaacttttggaacaactttct 28494910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 294
Target Start/End: Complemental strand, 45693535 - 45693476
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcac 294  Q
    ||||||||||||||||||||||| | ||||||||| | |||||||| | ||||||||||||    
T  45693535 aatgatatttgtacaattattttatgataattttttg-acaactttttttctcatattcac 45693476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 234 - 269
Target Start/End: Original strand, 3771375 - 3771410
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttg 269  Q
    ||||||||||||||||| ||||||||||||||||||    
T  3771375 aatgatatttgtacaatcattttttaataatttttg 3771410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 234 - 296
Target Start/End: Original strand, 5361799 - 5361859
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    ||||||||||||||||| ||||| ||||||||||||  |||| ||||| ||||||| ||||||    
T  5361799 aatgatatttgtacaatcattttctaataatttttg--acaattttctctctcatactcacat 5361859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 304
Target Start/End: Original strand, 5962642 - 5962711
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacatgtgatttt 304  Q
    ||||||||||||||||| ||| | | ||||||||||| |||||||| | ||||||| ||||||| ||||||    
T  5962642 aatgatatttgtacaatcattatgtgataatttttgg-acaactttatttctcatactcacatgagatttt 5962711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 319
Target Start/End: Original strand, 6328671 - 6328756
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcaca-tgtgattttattcactctcttctt 319  Q
    ||||||||||||||||  |||||   |||||||||| | ||||||||| ||||||||||||| | || |||||||| ||||||||||    
T  6328671 aatgatatttgtacaaccattttggtataatttttgta-caactttctctctcatattcacattatgtttttattctctctcttctt 6328756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 268
Target Start/End: Original strand, 17917393 - 17917427
Alignment:
Q  234 aatgatatttgtacaattattttttaataattttt 268  Q
    ||||||||||||||||||||||||||| |||||||    
T  17917393 aatgatatttgtacaattattttttaacaattttt 17917427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 296
Target Start/End: Complemental strand, 18876989 - 18876927
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    ||||||||||| |||  |||||  ||||||||||||  |||||||||| ||||||||||||||    
T  18876989 aatgatatttgaacatctatttggtaataatttttgtgacaactttctctctcatattcacat 18876927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 265
Target Start/End: Original strand, 33846946 - 33846976
Alignment:
Q  235 atgatatttgtacaattattttttaataatt 265  Q
    |||||||||||||||||||||||||||||||    
T  33846946 atgatatttgtacaattattttttaataatt 33846976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 296
Target Start/End: Original strand, 39147769 - 39147831
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    ||||||| |||||||| |||||||| | || ||||| ||||||||||| | ||||||||||||    
T  39147769 aatgatacttgtacaactatttttttacaacttttgtaacaactttctctttcatattcacat 39147831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 227 - 269
Target Start/End: Complemental strand, 40358186 - 40358144
Alignment:
Q  227 aaagagcaatgatatttgtacaattattttttaataatttttg 269  Q
    |||||| |||||||||| ||||| |||||||||||||||||||    
T  40358186 aaagagaaatgatatttctacaactattttttaataatttttg 40358144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 296
Target Start/End: Complemental strand, 41353572 - 41353503
Alignment:
Q  226 aaaagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    ||||||| ||||||||||||||||| | ||| | |||||||||  ||||||||||| ||||||| ||||||    
T  41353572 aaaagagaaatgatatttgtacaatcaatttatgataattttt-taacaactttctctctcatactcacat 41353503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 295
Target Start/End: Original strand, 45420142 - 45420200
Alignment:
Q  237 gatatttgtacaattattttttaataatttttggaacaactttctatctcatattcaca 295  Q
    |||||||||||||  |||||||||||||||||   | |||||||||||||||| |||||    
T  45420142 gatatttgtacaaccattttttaataatttttatgataactttctatctcatactcaca 45420200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 273
Target Start/End: Original strand, 3358579 - 3358616
Alignment:
Q  236 tgatatttgtacaattattttttaataatttttggaac 273  Q
    ||||||||||||||||||||||| |||| |||||||||    
T  3358579 tgatatttgtacaattattttttgataagttttggaac 3358616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 314
Target Start/End: Complemental strand, 43820813 - 43820728
Alignment:
Q  229 agagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacatgtgattttattcactctc 314  Q
    |||| ||||||||||||||||| ||||||| | || ||||| ||||||  ||| ||||||| |||||| |  |||||||| |||||    
T  43820813 agagaaatgatatttgtacaatcatttttttacaacttttgaaacaaccatctttctcatactcacatatttttttattctctctc 43820728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 296
Target Start/End: Complemental strand, 1052569 - 1052502
Alignment:
Q  228 aagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    ||||| ||||||||||||||||  ||||||||| || |||| | |||||||| | ||||||||||||||    
T  1052569 aagagaaatgatatttgtacaaccattttttaacaacttttag-acaactttatctctcatattcacat 1052502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 269
Target Start/End: Original strand, 4319768 - 4319808
Alignment:
Q  229 agagcaatgatatttgtacaattattttttaataatttttg 269  Q
    |||| |||||||||||||||| |||||| ||||||||||||    
T  4319768 agagaaatgatatttgtacaactattttataataatttttg 4319808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 296
Target Start/End: Original strand, 5031921 - 5031989
Alignment:
Q  228 aagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    ||||| ||||||||||||||||  ||||| ||| || |||||  |||||||||| ||||||| ||||||    
T  5031921 aagagaaatgatatttgtacaaccattttgtaacaacttttgcgacaactttctctctcatactcacat 5031989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 234 - 317
Target Start/End: Complemental strand, 9695128 - 9695045
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacatgtgatt-ttattcactctcttc 317  Q
    ||||||||||||||||  ||| |   ||||||||||| |||||||||| ||||||| ||||||| |||| |||||| ||||||||    
T  9695128 aatgatatttgtacaaccattatgagataatttttgg-acaactttctctctcatactcacatgagattcttattctctctcttc 9695045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 269
Target Start/End: Original strand, 18531596 - 18531640
Alignment:
Q  225 taaaagagcaatgatatttgtacaattattttttaataatttttg 269  Q
    |||||||| |||||||||||||||| |||||||| | ||||||||    
T  18531596 taaaagagaaatgatatttgtacaactattttttgacaatttttg 18531640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 296
Target Start/End: Complemental strand, 18737947 - 18737879
Alignment:
Q  228 aagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    ||||| ||||||||||||| |   ||||||||| || |||||  |||||||||| ||||||||||||||    
T  18737947 aagagaaatgatatttgtatatccattttttaacaacttttgtgacaactttctctctcatattcacat 18737879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 296
Target Start/End: Original strand, 24766150 - 24766218
Alignment:
Q  228 aagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    ||||| ||||||||||||||||  |||||||||||| |||||  |||||||| | || |||| ||||||    
T  24766150 aagagaaatgatatttgtacaaccattttttaataacttttgtgacaactttatctcgcatactcacat 24766218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 234 - 294
Target Start/End: Complemental strand, 26481157 - 26481097
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcac 294  Q
    ||||||||||| ||||||||||||||| || |||||  |||| ||||| ||||||| ||||    
T  26481157 aatgatatttgaacaattattttttaacaacttttgtgacaattttctttctcatactcac 26481097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 234 - 322
Target Start/End: Original strand, 28544035 - 28544123
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacatgtgattttattcactctcttcttctc 322  Q
    |||||||||||||| |  ||||||| | || |||||  |||||  ||| ||||||  ||||||||| |||||||| |||||||||||||    
T  28544035 aatgatatttgtactaccattttttcacaacttttgtgacaaccatctctctcattctcacatgtgtttttattctctctcttcttctc 28544123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 297
Target Start/End: Complemental strand, 30192423 - 30192356
Alignment:
Q  229 agagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacatg 297  Q
    |||| |||||||||||| |||| ||||| ||| ||||||| |||||| ||||| ||||||| |||||||    
T  30192423 agagaaatgatatttgttcaatcattttgtaaaaattttt-gaacaattttctctctcatactcacatg 30192356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 234 - 317
Target Start/End: Original strand, 33857221 - 33857304
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacatgtgatt-ttattcactctcttc 317  Q
    |||||||||||||||||  |||| ||| ||||||| | |||||||||| ||||||| |||||||  ||| |||||| ||||||||    
T  33857221 aatgatatttgtacaatctttttctaacaattttttg-acaactttctctctcatactcacatgatattcttattctctctcttc 33857304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 296
Target Start/End: Original strand, 37003617 - 37003676
Alignment:
Q  236 tgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    ||||||||| |||| ||||||||||| |||||||  |||||||||| ||||||| ||||||    
T  37003617 tgatatttgaacaactattttttaat-atttttgtgacaactttctctctcatactcacat 37003676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 321
Target Start/End: Complemental strand, 40602418 - 40602370
Alignment:
Q  273 caactttctatctcatattcacatgtgattttattcactctcttcttct 321  Q
    |||| |||||||||||| |||||| || |||||||||||||||| ||||    
T  40602418 caaccttctatctcatactcacatatgtttttattcactctcttattct 40602370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 297
Target Start/End: Complemental strand, 44484728 - 44484661
Alignment:
Q  229 agagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacatg 297  Q
    |||| ||||||||||||||||  ||||| ||| ||||||| | |||||||||| ||||||| |||||||    
T  44484728 agagaaatgatatttgtacaaccattttgtaacaattttt-gtacaactttctctctcatactcacatg 44484661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1625 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold1625
Description:

Target: scaffold1625; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 228 - 321
Target Start/End: Complemental strand, 854 - 761
Alignment:
Q  228 aagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacatgtgattttattcactctcttcttct 321  Q
    ||||| ||||||||||||||||| ||||||| | || ||||| ||||||  ||| ||||||| ||||||||| ||| |||| ||||||||||||    
T  854 aagaggaatgatatttgtacaatcattttttgacaacttttgaaacaaccatctctctcatactcacatgtgttttaattctctctcttcttct 761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 224 - 321
Target Start/End: Original strand, 11728013 - 11728110
Alignment:
Q  224 ttaaaagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacatgtgattttattcactctcttcttct 321  Q
    ||||||||| |||||||||| ||||| ||||| |||| || ||||||||||||  ||||| ||||| ||||||||  ||| |||| ||||||||||||    
T  11728013 ttaaaagagaaatgatatttatacaaatatttcttaagaacttttggaacaaccatctatttcatactcacatgtcgtttcattcgctctcttcttct 11728110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 234 - 293
Target Start/End: Complemental strand, 39031279 - 39031220
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattca 293  Q
    ||||||||||||||||||||||||| |||| ||||| ||||| ||||| |||||||||||    
T  39031279 aatgatatttgtacaattatttttttataacttttgaaacaattttctctctcatattca 39031220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 236 - 321
Target Start/End: Original strand, 14127250 - 14127335
Alignment:
Q  236 tgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacatgtgattttattcactctcttcttct 321  Q
    ||||||||||||||  | ||||| | |||||||||||||||  ||| ||||||| ||||||||| ||| |||| ||||||||||||    
T  14127250 tgatatttgtacaaccactttttgacaatttttggaacaaccatctctctcatactcacatgtgttttaattctctctcttcttct 14127335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 226 - 319
Target Start/End: Complemental strand, 30170804 - 30170711
Alignment:
Q  226 aaaagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacatgtgattttattcactctcttctt 319  Q
    ||||||| ||||||||||||||||  | ||||| | || ||||| ||||||  ||| ||||||| ||||||||| |||||||| ||||||||||    
T  30170804 aaaagagaaatgatatttgtacaaccactttttgacaacttttgaaacaaccatctctctcatactcacatgtgtttttattctctctcttctt 30170711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 234 - 297
Target Start/End: Original strand, 10344328 - 10344390
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacatg 297  Q
    |||||||||||||||  |||||| ||||||||||||| |||||||||| ||||||| |||||||    
T  10344328 aatgatatttgtacatctattttataataatttttgg-acaactttctctctcatactcacatg 10344390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 234 - 297
Target Start/End: Original strand, 43186300 - 43186362
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacatg 297  Q
    ||||||||||||||||||||||| | ||||||||| | |||||||||| ||||||| |||||||    
T  43186300 aatgatatttgtacaattattttgtgataattttt-gtacaactttctctctcatactcacatg 43186362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 234 - 296
Target Start/End: Complemental strand, 14548890 - 14548829
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    ||||||||||||||||  ||||||||||||||||| | |||||||||| ||||||| ||||||    
T  14548890 aatgatatttgtacaaccattttttaataatttttag-acaactttctctctcatactcacat 14548829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 226 - 296
Target Start/End: Original strand, 45405527 - 45405597
Alignment:
Q  226 aaaagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    ||||||| |||||||| |||||||  ||||||||||||||||||  |||||||| | | ||||||||||||    
T  45405527 aaaagagaaatgatatatgtacaaccattttttaataatttttgtgacaactttttctttcatattcacat 45405597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 308
Target Start/End: Original strand, 13592764 - 13592844
Alignment:
Q  228 aagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacatgtgattttattc 308  Q
    ||||| |||||||||||||||  |||||||| | || ||||| ||||||| | | ||||||| ||||||||| ||||||||    
T  13592764 aagagaaatgatatttgtacacctattttttgacaacttttgaaacaactctatctctcatactcacatgtgtttttattc 13592844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 296
Target Start/End: Complemental strand, 24798431 - 24798363
Alignment:
Q  228 aagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    ||||| ||| ||||||||| ||||||||||| | |||||||  ||||||||||| ||||||| ||||||    
T  24798431 aagagaaattatatttgtataattattttttgacaatttttttaacaactttctctctcatactcacat 24798363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 229 - 296
Target Start/End: Original strand, 6972154 - 6972221
Alignment:
Q  229 agagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    |||| ||||||||||||||| | |||| |||| || |||||  |||||||||||||||||||| ||||    
T  6972154 agagaaatgatatttgtacagtcatttcttaacaacttttgtgacaactttctatctcatatttacat 6972221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 236 - 287
Target Start/End: Original strand, 10128647 - 10128698
Alignment:
Q  236 tgatatttgtacaattattttttaataatttttggaacaactttctatctca 287  Q
    ||||||||| ||||| ||||| |||||||||||| ||||||||||| |||||    
T  10128647 tgatatttgaacaataattttataataatttttgtaacaactttctttctca 10128698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 286
Target Start/End: Original strand, 35792067 - 35792125
Alignment:
Q  228 aagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctc 286  Q
    ||||| ||||||||||||||||| ||||||||| || |||||  |||||||||| ||||    
T  35792067 aagagaaatgatatttgtacaatcattttttaaaaacttttgtgacaactttctctctc 35792125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 296
Target Start/End: Complemental strand, 37942974 - 37942912
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    ||||||||||||||||||||||||| | ||||||||  |||||||| | | ||||||| ||||    
T  37942974 aatgatatttgtacaattattttttgacaatttttgtgacaactttttctttcatatttacat 37942912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 296
Target Start/End: Complemental strand, 41406923 - 41406862
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    ||||||||||||||||| ||||||| | |||||||  ||||||||||| ||||||| ||||||    
T  41406923 aatgatatttgtacaatcattttttgacaattttt-taacaactttctctctcatactcacat 41406862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 296
Target Start/End: Complemental strand, 43286038 - 43285968
Alignment:
Q  226 aaaagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    ||||||| ||||||||||| ||||  ||||| |||||| |||||  |||||||||| ||||||| ||||||    
T  43286038 aaaagagaaatgatatttggacaaccattttctaataacttttgtgacaactttctctctcatactcacat 43285968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 296
Target Start/End: Complemental strand, 2731035 - 2730966
Alignment:
Q  227 aaagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    |||||| ||||||||||| ||||  | ||||| | || ||||| ||||||||||| ||||||||||||||    
T  2731035 aaagagaaatgatatttgaacaaccactttttgacaacttttgtaacaactttctctctcatattcacat 2730966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 296
Target Start/End: Original strand, 10692436 - 10692504
Alignment:
Q  227 aaagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    |||||| ||||||||||| ||||| ||||||| ||||||||||  |||||||| | ||||||| ||||||    
T  10692436 aaagagaaatgatatttgaacaatcatttttt-ataatttttgtgacaactttatctctcatactcacat 10692504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 293
Target Start/End: Original strand, 12655920 - 12655985
Alignment:
Q  228 aagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattca 293  Q
    ||||| ||||||||||||||||  ||||| |||||| ||||| || |||||| | |||||||||||    
T  12655920 aagagaaatgatatttgtacaaccattttataataacttttgtaataactttttctctcatattca 12655985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 295
Target Start/End: Original strand, 31806303 - 31806363
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcaca 295  Q
    ||||||||||||||||  ||||| ||| ||||||| || ||||||||| |||||||||||||    
T  31806303 aatgatatttgtacaaccattttctaacaattttttga-caactttctctctcatattcaca 31806363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 296
Target Start/End: Complemental strand, 33605152 - 33605083
Alignment:
Q  227 aaagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    |||||| ||||||||||| ||||  ||||| | |||| ||||||||||| ||||| ||||||| ||||||    
T  33605152 aaagagaaatgatatttgaacaaccattttatgataacttttggaacaattttctctctcatactcacat 33605083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 296
Target Start/End: Original strand, 35067157 - 35067226
Alignment:
Q  227 aaagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    |||||| ||||||||||||||||  |||| |||| || |||||  |||||||||| ||||||| ||||||    
T  35067157 aaagagaaatgatatttgtacaaccatttcttaacaacttttgtgacaactttctctctcatactcacat 35067226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 296
Target Start/End: Original strand, 35564286 - 35564355
Alignment:
Q  227 aaagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    |||||| ||||||||||| |||   ||||  | |||||||||| ||||||||||||||||||| ||||||    
T  35564286 aaagagaaatgatatttgaacatccatttagtgataatttttgcaacaactttctatctcatactcacat 35564355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 36023080 - 36023121
Alignment:
Q  226 aaaagagcaatgatatttgtacaattattttttaataatttt 267  Q
    ||||||| ||||||||||| ||||||||||||||| ||||||    
T  36023080 aaaagagaaatgatatttgaacaattattttttaacaatttt 36023121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 296
Target Start/End: Original strand, 6440079 - 6440147
Alignment:
Q  228 aagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    ||||| |||||||||||||||| ||||| || | || |||||  |||||||||| ||||||| ||||||    
T  6440079 aagagaaatgatatttgtacaactatttctttacaacttttgtgacaactttctctctcatactcacat 6440147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 234 - 317
Target Start/End: Original strand, 14228711 - 14228794
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacatg-tgattttattcactctcttc 317  Q
    |||||||||||||||| |||||| | |||| |||| | |||||||||| ||||||| ||||||| || | |||||| ||||||||    
T  14228711 aatgatatttgtacaactattttgtgataactttt-gtacaactttctctctcatactcacatgatgttcttattctctctcttc 14228794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 224 - 260
Target Start/End: Original strand, 29107989 - 29108025
Alignment:
Q  224 ttaaaagagcaatgatatttgtacaattattttttaa 260  Q
    ||||||||| ||||||||||||||||| |||||||||    
T  29107989 ttaaaagagaaatgatatttgtacaatcattttttaa 29108025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 296
Target Start/End: Complemental strand, 30608781 - 30608714
Alignment:
Q  228 aagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    ||||| ||||||||||||||||| ||||||||| || |||| | | |||||||| | ||||||||||||    
T  30608781 aagagaaatgatatttgtacaataattttttaacaactttttg-ataactttctctttcatattcacat 30608714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 234 - 294
Target Start/End: Original strand, 35153019 - 35153079
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcac 294  Q
    ||||||||||| ||||| ||||| ||| ||||||||  |||||||| ||||||||| ||||    
T  35153019 aatgatatttgaacaatcattttgtaacaatttttgttacaactttttatctcatactcac 35153079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 321
Target Start/End: Complemental strand, 37568740 - 37568696
Alignment:
Q  277 tttctatctcatattcacatgtgattttattcactctcttcttct 321  Q
    ||||| ||| ||||||||||||| |||||||| ||||||||||||    
T  37568740 tttctctcttatattcacatgtgtttttattctctctcttcttct 37568696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 296
Target Start/End: Original strand, 42716318 - 42716385
Alignment:
Q  228 aagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    ||||| ||||||||||||||||  | ||||| ||||||||| | |||||||||| ||||||| ||||||    
T  42716318 aagagaaatgatatttgtacaaccactttttcataattttttg-acaactttctctctcatactcacat 42716385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 228 - 296
Target Start/End: Complemental strand, 16368120 - 16368052
Alignment:
Q  228 aagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    ||||| ||||||||||||||||  ||||| |||||||||||| ||||||||||| ||||||| ||||||    
T  16368120 aagagaaatgatatttgtacaaccattttataataatttttgtaacaactttctttctcatactcacat 16368052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 314
Target Start/End: Complemental strand, 31204887 - 31204797
Alignment:
Q  224 ttaaaagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacatgtgattttattcactctc 314  Q
    ||||||||| |||||||||| |||||  ||||||| |||| ||||| || |||| ||| ||||||||||| ||||| |||||||| |||||    
T  31204887 ttaaaagagaaatgatatttctacaaccattttttgataacttttgaaataactctctctctcatattcatatgtgtttttattctctctc 31204797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 234 - 321
Target Start/End: Original strand, 10840722 - 10840809
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacatgtgattttattcactctcttcttct 321  Q
    ||||||||||||||||||||||||| | || |||||||||||   ||| ||||||| |||| ||||  || |||| ||||||||||||    
T  10840722 aatgatatttgtacaattattttttgacaacttttggaacaatcctctctctcatactcacttgtgtattaattctctctcttcttct 10840809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 226 - 296
Target Start/End: Complemental strand, 2242097 - 2242027
Alignment:
Q  226 aaaagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    ||||||| ||||||||||| ||||| ||||||| | ||||||||  |||||||||| ||||||| ||||||    
T  2242097 aaaagagaaatgatatttgaacaatcattttttgacaatttttgtgacaactttctctctcatactcacat 2242027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 234 - 296
Target Start/End: Complemental strand, 16743333 - 16743272
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    ||||||||||||||||  ||||||||||||||||| | |||||||||| ||||||| ||||||    
T  16743333 aatgatatttgtacaaccattttttaataatttttag-acaactttctctctcatactcacat 16743272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 226 - 296
Target Start/End: Complemental strand, 30423670 - 30423600
Alignment:
Q  226 aaaagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    ||||||| ||||||||||| ||||||||||||| | |  ||||| ||||||||||| | ||||||||||||    
T  30423670 aaaagagaaatgatatttgaacaattattttttgacagcttttgtaacaactttctctatcatattcacat 30423600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 227 - 296
Target Start/End: Complemental strand, 8505848 - 8505779
Alignment:
Q  227 aaagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    |||||| ||||||||||| ||||| ||||||| | || |||||  |||||||||| ||||||||||||||    
T  8505848 aaagagaaatgatatttgaacaatcattttttgacaacttttgtgacaactttctctctcatattcacat 8505779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 227 - 296
Target Start/End: Original strand, 11785352 - 11785420
Alignment:
Q  227 aaagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    |||||| ||||||||||||||||  ||||| | | ||||||| || ||||||||||||||||||||||||    
T  11785352 aaagagaaatgatatttgtacaaccattttgtgacaattttttga-caactttctatctcatattcacat 11785420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 224 - 316
Target Start/End: Complemental strand, 17417312 - 17417220
Alignment:
Q  224 ttaaaagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacatgtgatt-ttattcactctctt 316  Q
    ||||||||| ||||||||||||||||| ||| | | | ||||||||| |||||||||| ||||||| ||||||  |||| |||||| |||||||    
T  17417312 ttaaaagagaaatgatatttgtacaatcattatgtgacaatttttgg-acaactttctctctcatactcacattagattcttattctctctctt 17417220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 296
Target Start/End: Complemental strand, 16337996 - 16337928
Alignment:
Q  228 aagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    ||||| ||||||||| ||||||  ||||| |||||| ||||| ||||||||||| ||||||| ||||||    
T  16337996 aagagaaatgatattggtacaaccattttataataacttttgtaacaactttctctctcatactcacat 16337928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 296
Target Start/End: Original strand, 33651014 - 33651086
Alignment:
Q  224 ttaaaagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    ||||||||| ||||||||||| |||  |||||| ||||||||||||  |||||||||| ||| ||| ||||||    
T  33651014 ttaaaagagaaatgatatttgaacatctattttgtaataatttttgtgacaactttctctctaatactcacat 33651086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 229 - 268
Target Start/End: Complemental strand, 26396547 - 26396508
Alignment:
Q  229 agagcaatgatatttgtacaattattttttaataattttt 268  Q
    |||| ||||||||||||||||||||||| |||||||||||    
T  26396547 agagaaatgatatttgtacaattattttataataattttt 26396508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 296
Target Start/End: Complemental strand, 11635602 - 11635540
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    ||||||||||| ||||| ||||||| | || |||||  |||||||||| ||||||||||||||    
T  11635602 aatgatatttgaacaatcattttttgacaacttttgtgacaactttctctctcatattcacat 11635540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 296
Target Start/End: Complemental strand, 17551454 - 17551384
Alignment:
Q  226 aaaagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    ||||||| ||||||||||| ||||  ||||||| | || ||||| ||||||||||| ||||||| ||||||    
T  17551454 aaaagagaaatgatatttgaacaaccattttttgacaacttttgtaacaactttctctctcatactcacat 17551384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 296
Target Start/End: Original strand, 27612879 - 27612940
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    ||||||||||| ||||||||||| ||||||||||  | |||| ||||| ||||||||||||||    
T  27612879 aatgatatttgaacaattattttataataattttatg-acaattttctctctcatattcacat 27612940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 296
Target Start/End: Complemental strand, 34570662 - 34570600
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    ||||||||||||||||  ||||| |||||| |||||  |||||||||| ||||||| ||||||    
T  34570662 aatgatatttgtacaaccattttgtaataacttttgtgacaactttctctctcatactcacat 34570600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 289
Target Start/End: Complemental strand, 7636500 - 7636440
Alignment:
Q  229 agagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcata 289  Q
    |||| ||||||||||||||||| ||||| |||||| |||| | |||||| ||| |||||||    
T  7636500 agagaaatgatatttgtacaatcattttataataactttttggacaactctctttctcata 7636440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 234 - 294
Target Start/End: Original strand, 17182103 - 17182163
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcac 294  Q
    ||||||||||  |||| |||||||| ||||||||||  |||| ||||| ||||||||||||    
T  17182103 aatgatattttaacaactattttttgataatttttgtgacaattttctctctcatattcac 17182163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 321
Target Start/End: Original strand, 961271 - 961367
Alignment:
Q  225 taaaagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacatgtgattttattcactctcttcttct 321  Q
    |||||||| ||| ||||||||||||| ||||||| |||| ||||| ||||||| ||| ||||||| ||||||||  ||| |||  ||||||||||||    
T  961271 taaaagagaaataatatttgtacaataattttttgataacttttgaaacaactctctctctcatactcacatgttttttcattatctctcttcttct 961367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 228 - 317
Target Start/End: Complemental strand, 53662501 - 53662412
Alignment:
Q  228 aagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacatg-tgattttattcactctcttc 317  Q
    ||||| |||||||||||||||| |||||| ||| ||||||| | |||||||||| ||||||||||||||| || | |||||| ||||||||    
T  53662501 aagagaaatgatatttgtacaactattttgtaacaattttt-gtacaactttctctctcatattcacatgatgttcttattctctctcttc 53662412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 234 - 321
Target Start/End: Complemental strand, 13140368 - 13140283
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacatgtgattttattcactctcttcttct 321  Q
    |||||||||||||||  |||||||| | || ||||| ||||||| |||  |||||| ||||||||| |||||||| ||||||||||||    
T  13140368 aatgatatttgtacatctattttttgacaacttttgaaacaactctct--ctcatactcacatgtgtttttattctctctcttcttct 13140283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 228 - 296
Target Start/End: Original strand, 39158103 - 39158171
Alignment:
Q  228 aagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    ||||| ||||||||||| ||||| ||||||| ||||||||||  |||||||||| ||||||| ||||||    
T  39158103 aagagaaatgatatttgaacaatcattttttgataatttttgtgacaactttctctctcatactcacat 39158171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 229 - 296
Target Start/End: Complemental strand, 9472585 - 9472519
Alignment:
Q  229 agagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    |||| |||||||||||||||| |||||| ||||||||||| | |||||||||| ||||||| ||||||    
T  9472585 agagaaatgatatttgtacaactattttctaataattttttg-acaactttctctctcatactcacat 9472519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 234 - 296
Target Start/End: Complemental strand, 336874 - 336813
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    |||||||||||||||||||| |||| | ||||||||  |||||||||| ||||||||||||||    
T  336874 aatgatatttgtacaattat-ttttgacaatttttgtgacaactttctctctcatattcacat 336813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 238 - 296
Target Start/End: Complemental strand, 5466558 - 5466501
Alignment:
Q  238 atatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    |||| ||||||||||||||  |||||||||||| |||||||||| ||||||||||||||    
T  5466558 atatatgtacaattattttgcaataatttttgg-acaactttctctctcatattcacat 5466501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 227 - 305
Target Start/End: Original strand, 42815401 - 42815479
Alignment:
Q  227 aaagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacatgtgatttta 305  Q
    |||||| |||||||||||||||| |||||| ||| || |||||  |||||||||| ||||||| |||||| || |||||    
T  42815401 aaagagaaatgatatttgtacaactattttgtaacaacttttgtgacaactttctctctcatactcacatatgttttta 42815479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 226 - 296
Target Start/End: Complemental strand, 44257805 - 44257735
Alignment:
Q  226 aaaagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    ||||||| |||||||||||| |||| ||||| ||| ||||||||  |||||||||| ||||||| ||||||    
T  44257805 aaaagagaaatgatatttgtgcaatcattttctaacaatttttgtgacaactttctctctcatactcacat 44257735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 227 - 321
Target Start/End: Complemental strand, 54222131 - 54222037
Alignment:
Q  227 aaagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacatgtgattttattcactctcttcttct 321  Q
    |||||| ||||||||||||||||  | ||||||| || |||||||||||   | | ||||||| ||||||||| |||||||| | ||||||||||    
T  54222131 aaagaggaatgatatttgtacaaccactttttaacaacttttggaacaatcatgtctctcatactcacatgtgcttttattctccctcttcttct 54222037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 229 - 302
Target Start/End: Original strand, 20056395 - 20056467
Alignment:
Q  229 agagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacatgtgatt 302  Q
    |||| |||||||||||||||| |||| | | ||||||||||| |||||||||| ||||||| ||||||| ||||    
T  20056395 agagaaatgatatttgtacaactattatgttataatttttgg-acaactttctctctcatagtcacatgagatt 20056467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 228 - 321
Target Start/End: Complemental strand, 35748737 - 35748644
Alignment:
Q  228 aagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacatgtgattttattcactctcttcttct 321  Q
    ||||| |||| |||||| |||| || ||||| ||||||||||||||||   | | ||||||| ||| ||||| |||||||| ||||||||||||    
T  35748737 aagagaaatgttatttgcacaactactttttgataatttttggaacaatcatatctctcatactcagatgtgtttttattctctctcttcttct 35748644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 296
Target Start/End: Original strand, 49584992 - 49585060
Alignment:
Q  228 aagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    ||||| |||||||||| ||| |  ||||| ||||||||||||| |||||||||| ||||||| ||||||    
T  49584992 aagagaaatgatatttctacgaccattttctaataatttttgggacaactttctctctcatactcacat 49585060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 298
Target Start/End: Complemental strand, 52372259 - 52372195
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacatgt 298  Q
    ||||||||||||||||||| ||||| |||| ||||| || |||| |||||||| || ||||||||    
T  52372259 aatgatatttgtacaattaatttttgataacttttgaaataactatctatctcttactcacatgt 52372195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 308
Target Start/End: Original strand, 52697481 - 52697560
Alignment:
Q  228 aagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacatgtgattttattc 308  Q
    ||||| |||||||||| |||||| |||||||||||||||||  ||||||| ||| | |||||||||| |||  ||||||||    
T  52697481 aagagaaatgatatttatacaatcattttttaataattttt-aaacaactctctctttcatattcacctgtttttttattc 52697560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 229 - 296
Target Start/End: Complemental strand, 2004261 - 2004194
Alignment:
Q  229 agagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    |||| ||||||||||| ||||  ||||||||| || ||||| |||||||||||||||| || ||||||    
T  2004261 agagaaatgatatttgaacaaccattttttaacaacttttgcaacaactttctatctcttactcacat 2004194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 234 - 305
Target Start/End: Complemental strand, 3078975 - 3078904
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacatgtgatttta 305  Q
    ||||||||||||||||| ||||| ||| || |||||  |||||||||| ||||||| |||||| || |||||    
T  3078975 aatgatatttgtacaatcattttgtaacaacttttgtgacaactttctctctcatactcacatatgttttta 3078904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 234 - 321
Target Start/End: Complemental strand, 32871896 - 32871809
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacatgtgattttattcactctcttcttct 321  Q
    |||||||||||||| | ||||| || | || ||||| |||||   ||| ||||||||||||||||  |||||||| ||||||||||||    
T  32871896 aatgatatttgtaccactatttcttgacaacttttgaaacaatcatctctctcatattcacatgtagttttattctctctcttcttct 32871809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 234 - 297
Target Start/End: Original strand, 32901333 - 32901395
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacatg 297  Q
    |||||||||||||||| |||||||| ||||||||| | |||||||||| | ||||| |||||||    
T  32901333 aatgatatttgtacaactattttttgataattttt-gcacaactttctctttcatactcacatg 32901395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 234 - 297
Target Start/End: Complemental strand, 40722031 - 40721969
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacatg 297  Q
    |||||||||||||||   ||||| ||||||||||||| |||||||||| ||||||| |||||||    
T  40722031 aatgatatttgtacatccattttataataatttttgg-acaactttctctctcatactcacatg 40721969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 226 - 289
Target Start/End: Original strand, 47288078 - 47288141
Alignment:
Q  226 aaaagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcata 289  Q
    ||||||| ||||||||||||||||  ||||| ||| ||||||||  |||||||||| |||||||    
T  47288078 aaaagagaaatgatatttgtacaaccattttgtaacaatttttgtgacaactttctctctcata 47288141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 229 - 296
Target Start/End: Complemental strand, 51107513 - 51107447
Alignment:
Q  229 agagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    |||| ||||||||||||||||| ||||||  ||||||||| | |||||||||| ||||||||| ||||    
T  51107513 agagaaatgatatttgtacaatcatttttgtataattttt-gcacaactttctctctcatatttacat 51107447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 234 - 281
Target Start/End: Complemental strand, 54251517 - 54251471
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttct 281  Q
    |||||||||||||||| |||||||||||||||||| | ||||||||||    
T  54251517 aatgatatttgtacaactattttttaataatttttcg-acaactttct 54251471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 296
Target Start/End: Complemental strand, 149552 - 149490
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    ||||||||||| ||||| | ||||| ||||||||||  |||||||||| ||||||| ||||||    
T  149552 aatgatatttgaacaatcactttttgataatttttgtgacaactttctctctcatactcacat 149490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 296
Target Start/End: Complemental strand, 2738335 - 2738273
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    ||||||||||| ||||| ||||||| | ||||||||  | |||||||| ||||||||||||||    
T  2738335 aatgatatttgaacaatcattttttgacaatttttgtgataactttctctctcatattcacat 2738273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 296
Target Start/End: Original strand, 17805460 - 17805517
Alignment:
Q  238 atatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    |||||||||||| |||||||||||||||||| | |||| ||||| ||||||| ||||||    
T  17805460 atatttgtacaactattttttaataattttttg-acaattttctctctcatactcacat 17805517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 18624269 - 18624227
Alignment:
Q  252 attttttaataatttttggaacaactttctatctcatattcac 294  Q
    ||||| ||||||||||||  |||||||||||||||||||||||    
T  18624269 attttgtaataatttttgctacaactttctatctcatattcac 18624227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 227 - 269
Target Start/End: Original strand, 20760252 - 20760294
Alignment:
Q  227 aaagagcaatgatatttgtacaattattttttaataatttttg 269  Q
    |||||| ||||||||||||||||||||||||||| || |||||    
T  20760252 aaagagaaatgatatttgtacaattattttttaacaacttttg 20760294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 227 - 269
Target Start/End: Original strand, 20766643 - 20766685
Alignment:
Q  227 aaagagcaatgatatttgtacaattattttttaataatttttg 269  Q
    |||||| ||||||||||||||||||||||||||| || |||||    
T  20766643 aaagagaaatgatatttgtacaattattttttaacaacttttg 20766685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 296
Target Start/End: Complemental strand, 33820411 - 33820342
Alignment:
Q  226 aaaagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    ||||||| |||||||||||||||| |||||| ||| || |||| | |||||||||| ||||||| ||||||    
T  33820411 aaaagagaaatgatatttgtacaactattttctaacaactttttg-acaactttctctctcatactcacat 33820342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 296
Target Start/End: Original strand, 40308445 - 40308506
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    ||||||||||||||||| ||||| ||||||||||| | |||||||||| | ||||| ||||||    
T  40308445 aatgatatttgtacaatcattttataataattttttg-acaactttctctttcatactcacat 40308506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 288
Target Start/End: Complemental strand, 42135528 - 42135474
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcat 288  Q
    ||||||||||| |||||||||||| |||||||||||  |||||| ||| ||||||    
T  42135528 aatgatatttgaacaattatttttaaataatttttgtgacaactctctttctcat 42135474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 289
Target Start/End: Complemental strand, 52263945 - 52263891
Alignment:
Q  235 atgatatttgtacaattattttttaataatttttggaacaactttctatctcata 289  Q
    ||||||||| |||||| ||||||| |||||||||  ||||||||||| |||||||    
T  52263945 atgatatttatacaatcattttttgataatttttataacaactttctctctcata 52263891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 291
Target Start/End: Original strand, 21392566 - 21392631
Alignment:
Q  226 aaaagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatatt 291  Q
    ||||||| ||||||||||| ||||| ||||| ||||||||||||  ||| |||||| | |||||||    
T  21392566 aaaagagaaatgatatttgaacaatcattttgtaataatttttgtgacagctttctctttcatatt 21392631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 296
Target Start/End: Complemental strand, 38864810 - 38864741
Alignment:
Q  227 aaagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    |||||| ||||||||||||||||||||||| | | || ||||   |||||||||| ||||||| ||||||    
T  38864810 aaagagaaatgatatttgtacaattattttgtgacaacttttttgacaactttctctctcatactcacat 38864741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 294
Target Start/End: Complemental strand, 40629412 - 40629348
Alignment:
Q  229 agagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcac 294  Q
    |||| |||||||||||||||| |||||| ||||||  ||||| |||||||||| ||||||| ||||    
T  40629412 agagaaatgatatttgtacaactattttgtaataacctttgg-acaactttctctctcatactcac 40629348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 296
Target Start/End: Complemental strand, 44272884 - 44272816
Alignment:
Q  227 aaagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    |||||| |||||||||||||||| |||||||| | || ||||  ||||||||||| ||||||| ||||||    
T  44272884 aaagagaaatgatatttgtacaactattttttgacaactttt-aaacaactttctctctcatactcacat 44272816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 293
Target Start/End: Complemental strand, 44496067 - 44496003
Alignment:
Q  228 aagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattca 293  Q
    ||||| ||||||| ||||||||||||||||| ||||||||| | | || ||||| |||||||||||    
T  44496067 aagagaaatgatagttgtacaattattttttgataatttttag-ataattttctctctcatattca 44496003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 269
Target Start/End: Original strand, 52204848 - 52204889
Alignment:
Q  228 aagagcaatgatatttgtacaattattttttaataatttttg 269  Q
    ||||| ||||||||||| ||||||||||||||| ||||||||    
T  52204848 aagagaaatgatatttgaacaattattttttaacaatttttg 52204889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 234 - 317
Target Start/End: Original strand, 8680945 - 8681028
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacatgtgatt-ttattcactctcttc 317  Q
    ||||||||||||||||  ||| | | ||| ||||||| |||||||||| ||||||| ||||||| |||| |||||| ||||||||    
T  8680945 aatgatatttgtacaaccattatgtgatattttttgg-acaactttctctctcatactcacatgagattcttattctctctcttc 8681028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 296
Target Start/End: Original strand, 12241056 - 12241123
Alignment:
Q  228 aagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    ||||| |||||||||||||||| |||||| ||| || |||| | |||||||||| ||||||| ||||||    
T  12241056 aagagaaatgatatttgtacaactattttctaacaactttttg-acaactttctctctcatactcacat 12241123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 288
Target Start/End: Original strand, 20381349 - 20381409
Alignment:
Q  228 aagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcat 288  Q
    ||||| ||| ||||||| ||||| ||||||| |||||||||  ||||||||||| ||||||    
T  20381349 aagagaaattatatttgaacaatcattttttgataatttttataacaactttctctctcat 20381409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 296
Target Start/End: Complemental strand, 29577509 - 29577442
Alignment:
Q  228 aagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    ||||| |||||||||||||||| |||||||  | ||||||| | |||||||||| ||||||| ||||||    
T  29577509 aagagaaatgatatttgtacaactatttttgtacaattttt-gtacaactttctttctcatactcacat 29577442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 224 - 296
Target Start/End: Original strand, 31559532 - 31559604
Alignment:
Q  224 ttaaaagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    |||| |||| ||||||||||||||||| ||||||| |||||  |||  |||| ||||| ||||||| ||||||    
T  31559532 ttaatagagaaatgatatttgtacaatcattttttgataatagttgtgacaattttctctctcatactcacat 31559604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 319
Target Start/End: Original strand, 45652690 - 45652730
Alignment:
Q  279 tctatctcatattcacatgtgattttattcactctcttctt 319  Q
    ||||||||||| ||||||||| |||||||| ||||||||||    
T  45652690 tctatctcatactcacatgtgtttttattctctctcttctt 45652730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 228 - 296
Target Start/End: Original strand, 30535989 - 30536057
Alignment:
Q  228 aagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    ||||| ||||||||||||||||| ||||||||| ||||||||  |||||||||| ||||||| ||||||    
T  30535989 aagagaaatgatatttgtacaatcattttttaacaatttttgtgacaactttctctctcatactcacat 30536057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 234 - 294
Target Start/End: Original strand, 44723364 - 44723424
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcac 294  Q
    ||||||||||||||| ||||||| ||||||||||||  |||||||||| ||||||||||||    
T  44723364 aatgatatttgtacatttattttataataatttttgtgacaactttctctctcatattcac 44723424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 234 - 305
Target Start/End: Original strand, 46281440 - 46281511
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacatgtgatttta 305  Q
    |||||||||||||||| |||||| ||||||||||||  |||||||||| ||||||| |||||| || |||||    
T  46281440 aatgatatttgtacaactattttgtaataatttttgtgacaactttctctctcatactcacatatgttttta 46281511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 228 - 314
Target Start/End: Complemental strand, 35883680 - 35883594
Alignment:
Q  228 aagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacatgtgattttattcactctc 314  Q
    ||||| ||||||||||||||||||||||||| | || ||||| ||||||  | | ||||||| ||||||||| |||||||| |||||    
T  35883680 aagagaaatgatatttgtacaattattttttgacaacttttgaaacaaccatatctctcatactcacatgtgtttttattctctctc 35883594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 234 - 296
Target Start/End: Original strand, 49931557 - 49931619
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    ||||||||||||||||| ||||||||| || |||||  |||||||||| ||||||||||||||    
T  49931557 aatgatatttgtacaatcattttttaacaacttttgtgacaactttctctctcatattcacat 49931619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 226 - 296
Target Start/End: Complemental strand, 50775232 - 50775162
Alignment:
Q  226 aaaagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    ||||||| |||||||||| |||||||||||||| | ||||||||  |||||||||| ||||||| ||||||    
T  50775232 aaaagagtaatgatatttatacaattattttttgacaatttttgtgacaactttctctctcatactcacat 50775162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 228 - 296
Target Start/End: Original strand, 32216000 - 32216067
Alignment:
Q  228 aagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    ||||| ||||||||||||||||| |||||||||||| |||| | |||||||||| ||||||| ||||||    
T  32216000 aagagaaatgatatttgtacaataattttttaataaattttag-acaactttctctctcatactcacat 32216067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 229 - 296
Target Start/End: Original strand, 1689390 - 1689457
Alignment:
Q  229 agagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    |||| |||||||||||||||| |||||| ||| ||||||||  |||||||||| ||||||| ||||||    
T  1689390 agagaaatgatatttgtacaactattttataacaatttttgtgacaactttctctctcatactcacat 1689457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 225 - 321
Target Start/End: Original strand, 42577467 - 42577565
Alignment:
Q  225 taaaagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctc--atattcacatgtgattttattcactctcttcttct 321  Q
    |||||||| ||||||||||||||||| |  |||||| || ||||| || || ||||| ||||  ||||| ||||||| |||||||| ||||||||||||    
T  42577467 taaaagagaaatgatatttgtacaatcacattttaacaacttttgaaataattttctctctctcatatttacatgtgtttttattctctctcttcttct 42577565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 234 - 269
Target Start/End: Original strand, 45430803 - 45430838
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttg 269  Q
    ||||||||||||||||||||||||||||||||||||    
T  45430803 aatgatatttgtacaattattttttaataatttttg 45430838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 234 - 296
Target Start/End: Original strand, 47113278 - 47113339
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    ||||||||||||||||| |||||  |||||||||||| |||||||||| ||||||| ||||||    
T  47113278 aatgatatttgtacaatcattttgcaataatttttgg-acaactttctctctcatactcacat 47113339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 321
Target Start/End: Complemental strand, 2279358 - 2279302
Alignment:
Q  265 ttttggaacaactttctatctcatattcacatgtgattttattcactctcttcttct 321  Q
    ||||| ||||||| ||| |||||| |||||||||| |||||||| ||||||||||||    
T  2279358 ttttgaaacaactatctctctcatgttcacatgtgtttttattctctctcttcttct 2279302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 296
Target Start/End: Original strand, 26547232 - 26547299
Alignment:
Q  228 aagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    ||||| |||||||||||||||  |||||| | | |||||||| ||||||||||| ||||||||||||||    
T  26547232 aagagaaatgatatttgtacatatattttgtgacaatttttg-aacaactttctctctcatattcacat 26547299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 289
Target Start/End: Complemental strand, 35846949 - 35846890
Alignment:
Q  229 agagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcata 289  Q
    |||| |||||||||||||| |||||||||| |||| |||| | ||||||||||||||||||    
T  35846949 agagaaatgatatttgtactattattttttgataaattttag-acaactttctatctcata 35846890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 227 - 317
Target Start/End: Original strand, 1156476 - 1156566
Alignment:
Q  227 aaagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcaca-tgtgattttattcactctcttc 317  Q
    |||||| ||| ||||||||||| | |||||  |||||||||| || ||||||||| ||||||||||||| | || |||||||| ||||||||    
T  1156476 aaagagaaattatatttgtacattcattttgcaataattttttga-caactttctctctcatattcacattatgtttttattctctctcttc 1156566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 234 - 281
Target Start/End: Original strand, 31974724 - 31974771
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttct 281  Q
    ||||||||||||||||||||||||| |||||||||   ||||||||||    
T  31974724 aatgatatttgtacaattattttttgataatttttatgacaactttct 31974771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 234 - 269
Target Start/End: Complemental strand, 33173758 - 33173723
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttg 269  Q
    ||||||||||||||||||||||||| ||||||||||    
T  33173758 aatgatatttgtacaattatttttttataatttttg 33173723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 234 - 297
Target Start/End: Original strand, 43056720 - 43056782
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacatg 297  Q
    ||||||||||||||||  |||||  |||||||||||| |||||||||| ||||||| |||||||    
T  43056720 aatgatatttgtacaaccattttgcaataatttttgg-acaactttctctctcatactcacatg 43056782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 234 - 269
Target Start/End: Complemental strand, 45863788 - 45863753
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttg 269  Q
    ||||||||||||||||||||||||| ||||||||||    
T  45863788 aatgatatttgtacaattattttttgataatttttg 45863753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 320
Target Start/End: Complemental strand, 1922492 - 1922406
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacatgtgattttattcactctcttcttc 320  Q
    ||||||||||||||||| | ||||| ||||||||||  |||||  ||| ||||||| |||||| || | |||||  |||||||||||    
T  1922492 aatgatatttgtacaatcactttttgataatttttgtgacaaccctctctctcatactcacatatgttattattttctctcttcttc 1922406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 296
Target Start/End: Original strand, 4213068 - 4213138
Alignment:
Q  226 aaaagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    ||||||| ||||||||||| ||||  ||||||| |||| |||||  |||||||||| ||||||| ||||||    
T  4213068 aaaagagaaatgatatttgaacaaccattttttgataacttttgtgacaactttctctctcatactcacat 4213138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 296
Target Start/End: Original strand, 5043096 - 5043157
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    ||||||||||||||||||||||| | |||||||||  || |||||||| | ||||||||||||    
T  5043096 aatgatatttgtacaattattttgtgataattttt-aaataactttctctttcatattcacat 5043157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 296
Target Start/End: Complemental strand, 5771815 - 5771753
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    ||||||||||| ||||| | ||||| ||||||||||  |||||||||| ||||||| ||||||    
T  5771815 aatgatatttgaacaatcactttttgataatttttgtgacaactttctctctcatactcacat 5771753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 271
Target Start/End: Original strand, 26101393 - 26101435
Alignment:
Q  229 agagcaatgatatttgtacaattattttttaataatttttgga 271  Q
    |||| ||||||||||||||||||||||| | ||||||||||||    
T  26101393 agagaaatgatatttgtacaattattttgtgataatttttgga 26101435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 296
Target Start/End: Original strand, 29359643 - 29359704
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    ||||||||||| ||||| |||||||| ||| ||||| ||||||||||| ||||||| ||||||    
T  29359643 aatgatatttgaacaatcatttttta-taacttttgtaacaactttctctctcatactcacat 29359704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 227 - 289
Target Start/End: Complemental strand, 36750557 - 36750495
Alignment:
Q  227 aaagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcata 289  Q
    |||||| |||||||||||||||| |||||  |||||| ||||| |||||| |||| |||||||    
T  36750557 aaagagaaatgatatttgtacaactatttcctaataacttttgaaacaacattctctctcata 36750495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 287
Target Start/End: Original strand, 39128409 - 39128466
Alignment:
Q  229 agagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctca 287  Q
    |||| ||| |||||||||||||||||||  |||||||||||| |||||||||| |||||    
T  39128409 agagaaattatatttgtacaattattttgcaataatttttgg-acaactttctctctca 39128466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 268
Target Start/End: Original strand, 42615864 - 42615898
Alignment:
Q  234 aatgatatttgtacaattattttttaataattttt 268  Q
    ||||||||||||||||| |||||||||||||||||    
T  42615864 aatgatatttgtacaatcattttttaataattttt 42615898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 268
Target Start/End: Original strand, 48325226 - 48325260
Alignment:
Q  234 aatgatatttgtacaattattttttaataattttt 268  Q
    ||||||||||||||||||||||||||| |||||||    
T  48325226 aatgatatttgtacaattattttttaacaattttt 48325260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 296
Target Start/End: Original strand, 49621367 - 49621428
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    ||||||||||||||||  ||||| ||||||||||| | |||||||||| ||||||| ||||||    
T  49621367 aatgatatttgtacaaccattttgtaataatttttag-acaactttctctctcatactcacat 49621428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 296
Target Start/End: Original strand, 52437498 - 52437560
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    |||||||| | |||||  ||||||||||||||||||  |||||||||| ||||||| ||||||    
T  52437498 aatgatatatatacaaccattttttaataatttttgtgacaactttctctctcatactcacat 52437560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 289
Target Start/End: Original strand, 16987445 - 16987505
Alignment:
Q  228 aagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcata 289  Q
    ||||| ||||||||||||||||||||||||||| || |||| | |||||||||  |||||||    
T  16987445 aagagaaatgatatttgtacaattattttttaacaacttttag-acaactttcactctcata 16987505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 279
Target Start/End: Original strand, 25672345 - 25672390
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaacttt 279  Q
    ||||||||||||||||  ||||||| |||||||||| |||||||||    
T  25672345 aatgatatttgtacaacaattttttgataatttttgtaacaacttt 25672390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 271
Target Start/End: Complemental strand, 25994983 - 25994946
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttgga 271  Q
    ||||||||||||||||||||||| | ||||||||||||    
T  25994983 aatgatatttgtacaattattttgtgataatttttgga 25994946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 296
Target Start/End: Original strand, 27352627 - 27352695
Alignment:
Q  227 aaagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    |||||| ||||||||||||||||  ||||| | |||| |||||| |||||||||| ||||||| ||||||    
T  27352627 aaagagaaatgatatttgtacaaccattttgtgataacttttgg-acaactttctctctcatactcacat 27352695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 319
Target Start/End: Original strand, 28501451 - 28501536
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacatgtgattttattcactctcttctt 319  Q
    |||||||||| |||||  ||||||| | || ||||||||| ||  ||| ||||||||||| ||||| ||| |||| ||||||||||    
T  28501451 aatgatatttatacaaccattttttgacaacttttggaaccaccctctctctcatattcagatgtgttttaattctctctcttctt 28501536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 289
Target Start/End: Original strand, 8905727 - 8905786
Alignment:
Q  229 agagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcata 289  Q
    |||| |||||||||||||||| |||||||||| ||  ||| | ||||||||||||||||||    
T  8905727 agagaaatgatatttgtacaactattttttaacaaccttttg-acaactttctatctcata 8905786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 296
Target Start/End: Original strand, 23554749 - 23554816
Alignment:
Q  228 aagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    ||||| ||||||||||||||||  ||||||| |||||||||  ||||||||| | ||||||| ||||||    
T  23554749 aagagaaatgatatttgtacaaccattttttgataattttt-aaacaactttatctctcatactcacat 23554816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 289
Target Start/End: Original strand, 26501294 - 26501353
Alignment:
Q  229 agagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcata 289  Q
    |||| ||||||||||||||||  ||||| |||||| |||||| |||||||||| |||||||    
T  26501294 agagaaatgatatttgtacaaccattttgtaataacttttgg-acaactttctctctcata 26501353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 226 - 317
Target Start/End: Original strand, 29632430 - 29632521
Alignment:
Q  226 aaaagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcaca-tgtgattttattcactctcttc 317  Q
    ||||||| ||||||||||||||| ||||||| ||| ||||||| | |||| ||||| ||||| ||||| | | || |||||||| ||||||||    
T  29632430 aaaagagaaatgatatttgtacatttattttgtaacaattttttg-acaattttctctctcacattcatattatgtttttattctctctcttc 29632521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 296
Target Start/End: Original strand, 35369698 - 35369765
Alignment:
Q  228 aagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    ||||| ||||||||||| ||||| ||||||||  || |||||  |||||||||||||||||| ||||||    
T  35369698 aagagaaatgatatttgaacaatcattttttac-aacttttgtgacaactttctatctcatactcacat 35369765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 296
Target Start/End: Complemental strand, 44672103 - 44672036
Alignment:
Q  228 aagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    ||||| ||||||||||||||||| ||||||||| || |||| | |||| ||||| ||||||| ||||||    
T  44672103 aagagaaatgatatttgtacaatcattttttaacaactttttg-acaattttctctctcatactcacat 44672036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 297
Target Start/End: Complemental strand, 51193203 - 51193136
Alignment:
Q  229 agagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacatg 297  Q
    |||| |||||||||||||||   ||||| ||| ||||||||| |||||||||| ||||||| |||||||    
T  51193203 agagaaatgatatttgtacatccattttataacaatttttgg-acaactttctctctcatactcacatg 51193136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 234 - 298
Target Start/End: Complemental strand, 51231373 - 51231309
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacatgt 298  Q
    ||||||||||||||||  | ||||||| || |||||| |||||| ||| ||||||| ||||||||    
T  51231373 aatgatatttgtacaaccactttttaacaacttttggcacaactctctctctcatactcacatgt 51231309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000002; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 296
Target Start/End: Complemental strand, 47012644 - 47012575
Alignment:
Q  227 aaagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    |||||| ||||||||||||||||| ||||| ||||||||||||  |||| ||| | ||||||||||||||    
T  47012644 aaagagaaatgatatttgtacaatcattttctaataatttttgtgacaattttatctctcatattcacat 47012575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 305
Target Start/End: Original strand, 46829475 - 46829554
Alignment:
Q  226 aaaagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacatgtgatttta 305  Q
    ||||||| ||||||||||||||||  ||||| ||| ||||||||  |||||||||| ||||||| |||||| || |||||    
T  46829475 aaaagagaaatgatatttgtacaaccattttgtaacaatttttgtgacaactttctctctcatactcacatatgttttta 46829554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 322
Target Start/End: Original strand, 48395245 - 48395340
Alignment:
Q  227 aaagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacatgtgattttattcactctcttcttctc 322  Q
    |||||| ||||||||||||||||  | ||||| | || ||||| ||||||| ||| ||| ||| |||||| || |||||||| |||||||||||||    
T  48395245 aaagagaaatgatatttgtacaaccactttttgacaacttttgaaacaactctctctcttatactcacatatgtttttattctctctcttcttctc 48395340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 228 - 293
Target Start/End: Original strand, 42552897 - 42552962
Alignment:
Q  228 aagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattca 293  Q
    ||||| ||||||||||||||||| ||||||  | |||||||| ||||||||||  |||||||||||    
T  42552897 aagagaaatgatatttgtacaatcatttttatacaatttttgtaacaactttccctctcatattca 42552962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 228 - 308
Target Start/End: Complemental strand, 2849594 - 2849512
Alignment:
Q  228 aagagcaatgatatttgtacaattattttttaataatttttggaacaa--ctttctatctcatattcacatgtgattttattc 308  Q
    ||||| ||||||||||||||||||||||||| |||| ||||| || ||  || ||| ||||  | ||||||||||||||||||    
T  2849594 aagagaaatgatatttgtacaattattttttgataacttttgaaataactctctctctctctgactcacatgtgattttattc 2849512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 229 - 296
Target Start/End: Complemental strand, 28249642 - 28249575
Alignment:
Q  229 agagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    |||| ||||||||||| ||||||| ||||| ||||||||||  | |||||| | ||||||||||||||    
T  28249642 agagaaatgatatttgaacaattacttttttataatttttgttataactttttctctcatattcacat 28249575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 234 - 289
Target Start/End: Complemental strand, 31467324 - 31467269
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcata 289  Q
    ||||||||||||| ||| ||||||| | ||||||||  ||||||||||||||||||    
T  31467324 aatgatatttgtataataatttttttacaatttttgtgacaactttctatctcata 31467269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 234 - 293
Target Start/End: Complemental strand, 32529921 - 32529863
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattca 293  Q
    ||||||||||| |||| ||||||||| ||| ||||| ||||||||||| |||||||||||    
T  32529921 aatgatatttgaacaactatttttta-taacttttgtaacaactttctctctcatattca 32529863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 234 - 289
Target Start/End: Complemental strand, 43159642 - 43159587
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcata 289  Q
    ||||||||||| ||||  ||||||||| ||||||||  ||||||||||||||||||    
T  43159642 aatgatatttgaacaaccattttttaacaatttttgtgacaactttctatctcata 43159587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 234 - 321
Target Start/End: Original strand, 47925341 - 47925428
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacatgtgattttattcactctcttcttct 321  Q
    ||||||||||||||||  | | ||||| || ||||||||||||  ||| ||||||| ||||||||| ||| |||| || |||||||||    
T  47925341 aatgatatttgtacaaccactctttaacaacttttggaacaaccctctctctcatactcacatgtgttttaattctctatcttcttct 47925428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 296
Target Start/End: Original strand, 6269370 - 6269432
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    ||||||||||||||||  ||||| ||| ||||||||  |||||||||| ||||||| ||||||    
T  6269370 aatgatatttgtacaaccattttataacaatttttgtgacaactttctctctcatactcacat 6269432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 321
Target Start/End: Complemental strand, 7212734 - 7212643
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctc----atattcacatgtgattttattcactctcttcttct 321  Q
    |||||||||||||||| || ||||| | || ||||  ||||||||||| ||||    ||| ||||||||| |||||||| ||||||||||||    
T  7212734 aatgatatttgtacaactactttttcacaacttttaaaacaactttctctctctctcatactcacatgtgtttttattctctctcttcttct 7212643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 296
Target Start/End: Original strand, 7295454 - 7295516
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    ||||||||||||||||  |||||   | |||||||||||||||||||| ||||||| ||||||    
T  7295454 aatgatatttgtacaaccattttagtacaatttttggaacaactttctctctcatactcacat 7295516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 296
Target Start/End: Original strand, 17039161 - 17039222
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    |||||||||||||||| |||||||  ||||||||| | |||||||||| ||||||| ||||||    
T  17039161 aatgatatttgtacaactatttttgtataattttt-gtacaactttctctctcatactcacat 17039222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 296
Target Start/End: Original strand, 21153054 - 21153115
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    ||||||||||||||||| ||||| ||||||||||| | ||||||||||  |||||| ||||||    
T  21153054 aatgatatttgtacaatcattttctaataattttttg-acaactttcttcctcatactcacat 21153115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 321
Target Start/End: Complemental strand, 22589027 - 22588941
Alignment:
Q  235 atgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacatgtgattttattcactctcttcttct 321  Q
    |||||||||||||||  ||||||| | || ||||| ||||||   || ||||||| ||||||||| |||||||  ||||||||||||    
T  22589027 atgatatttgtacaaccattttttgacaacttttgaaacaaccccctctctcatactcacatgtgcttttattatctctcttcttct 22588941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 296
Target Start/End: Original strand, 26018044 - 26018106
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    ||||||||||||||||| ||||| |||||| |||||  ||||| || | ||||||||||||||    
T  26018044 aatgatatttgtacaatcattttataataacttttgtgacaacattatctctcatattcacat 26018106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 296
Target Start/End: Complemental strand, 35213022 - 35212961
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    |||||||||||||||||||||||   | ||||||| | |||||||||| ||||||||||||||    
T  35213022 aatgatatttgtacaattattttgctacaattttt-gtacaactttctctctcatattcacat 35212961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 296
Target Start/End: Complemental strand, 44496870 - 44496808
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    ||||||||||||| || |||||| ||| ||||||||  |||||||||| ||||||| ||||||    
T  44496870 aatgatatttgtataactattttctaacaatttttgtgacaactttctctctcatactcacat 44496808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 268
Target Start/End: Complemental strand, 21588991 - 21588958
Alignment:
Q  235 atgatatttgtacaattattttttaataattttt 268  Q
    ||||||||||||||||||||||||||||| ||||    
T  21588991 atgatatttgtacaattattttttaataactttt 21588958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 279
Target Start/End: Complemental strand, 34690991 - 34690946
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaacttt 279  Q
    |||||||||||||||| |||||| | |||||||||| |||||||||    
T  34690991 aatgatatttgtacaactattttatgataatttttgaaacaacttt 34690946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 297
Target Start/End: Complemental strand, 43255640 - 43255572
Alignment:
Q  228 aagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacatg 297  Q
    ||||| ||||||||||||||||||||||| | | ||||||| | |||| ||||| ||||||| |||||||    
T  43255640 aagagtaatgatatttgtacaattattttgtgacaattttt-gtacaattttctttctcatactcacatg 43255572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 289
Target Start/End: Original strand, 2300074 - 2300138
Alignment:
Q  225 taaaagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcata 289  Q
    |||||||  ||||||||||| |||| |||||| | | ||||||||  ||||||||||||||||||    
T  2300074 taaaagacaaatgatatttgaacaactattttatgacaatttttgttacaactttctatctcata 2300138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 224 - 256
Target Start/End: Complemental strand, 19510423 - 19510391
Alignment:
Q  224 ttaaaagagcaatgatatttgtacaattatttt 256  Q
    ||||||||| |||||||||||||||||||||||    
T  19510423 ttaaaagagaaatgatatttgtacaattatttt 19510391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 234 - 297
Target Start/End: Complemental strand, 29723995 - 29723931
Alignment:
Q  234 aatgatatttgtacaatta-ttttttaataatttttggaacaactttctatctcatattcacatg 297  Q
    ||||||||||| |||| || |||||| ||||||||||  |||||||||| ||||||| |||||||    
T  29723995 aatgatatttgaacaactatttttttgataatttttgtgacaactttctctctcatactcacatg 29723931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 234 - 286
Target Start/End: Original strand, 33057383 - 33057435
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctc 286  Q
    ||||||||||| |||| |||||||||| || ||||| ||||||||||| ||||    
T  33057383 aatgatatttgaacaactattttttaacaacttttgtaacaactttctttctc 33057435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 224 - 296
Target Start/End: Original strand, 34978290 - 34978362
Alignment:
Q  224 ttaaaagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    ||||| ||| ||||||||||| ||||| | ||||| | ||||||||  |||||||||| ||||||| ||||||    
T  34978290 ttaaatgagaaatgatatttgaacaatcactttttgacaatttttgtgacaactttctctctcatactcacat 34978362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 297
Target Start/End: Complemental strand, 37385309 - 37385238
Alignment:
Q  225 taaaagagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacatg 297  Q
    |||||||  |||||||||||||||| |||||||| | || |||| | |||||||||| ||||||| |||||||    
T  37385309 taaaagataaatgatatttgtacaactattttttgacaactttt-gtacaactttctctctcatactcacatg 37385238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 297
Target Start/End: Original strand, 38990100 - 38990167
Alignment:
Q  229 agagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacatg 297  Q
    |||| |||||||| |||| ||||||||||| ||||||||||| |||||||| | | ||||| |||||||    
T  38990100 agagaaatgatatatgtataattattttttcataatttttgg-acaactttttctttcatactcacatg 38990167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 234 - 293
Target Start/End: Original strand, 5923 - 5982
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattca 293  Q
    ||||||||||| |||||  |||| | |||||||||| |||||||||||||||||||||||    
T  5923 aatgatatttgaacaatatttttgtgataatttttgcaacaactttctatctcatattca 5982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0522 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0522
Description:

Target: scaffold0522; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 317
Target Start/End: Complemental strand, 2571 - 2488
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacatgtgatt-ttattcactctcttc 317  Q
    |||||||||||||||  |||| | | ||||||||||| |||||||||| ||||||| ||||||| |||| |||||| ||||||||    
T  2571 aatgatatttgtacatctattatgtgataatttttgg-acaactttctctctcatactcacatgagattcttattctctctcttc 2488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 321
Target Start/End: Complemental strand, 11621 - 11533
Alignment:
Q  233 caatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacatgtgattttattcactctcttcttct 321  Q
    |||| ||||||||||| ||||||||| | || ||||| ||||| | ||| ||||||| ||| ||||| |||||||| |||||| |||||    
T  11621 caattatatttgtacatttattttttgacaacttttgaaacaattctctctctcatactcaaatgtgtttttattctctctctccttct 11533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 296
Target Start/End: Original strand, 8476 - 8538
Alignment:
Q  234 aatgatatttgtacaattattttttaataatttttggaacaactttctatctcatattcacat 296  Q
    ||||||||||| ||||| ||||||||| |||||||   |||||||||| ||||||| ||||||    
T  8476 aatgatatttgaacaatcattttttaacaatttttatgacaactttctctctcatactcacat 8538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 289
Target Start/End: Complemental strand, 76691 - 76632
Alignment:
Q  229 agagcaatgatatttgtacaattattttttaataatttttggaacaactttctatctcata 289  Q
    |||| ||||||||||| |||| |||||||| ||||||||||  |||||||||| |||||||    
T  76691 agagaaatgatatttgaacaactatttttt-ataatttttgtgacaactttctctctcata 76632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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