View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8525_high_8 (Length: 297)
Name: NF8525_high_8
Description: NF8525
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8525_high_8 |
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Alignment Details
Target: chr2 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 1 - 276
Target Start/End: Complemental strand, 13117043 - 13116768
Alignment:
| Q |
1 |
acaagagtcatattgctcaagttatttcaatagtatataacacgtattatatagtgcaatatgtgataataagaagaatcacttatacaacaaattaatc |
100 |
Q |
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||||||||||||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| |
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| T |
13117043 |
acaagagtcatattgctcaagttcttacaatagtatataagacgtattatatagtgcaatatgtgataataggaagaaccacttatacaacaaattaatc |
13116944 |
T |
|
| Q |
101 |
aaaattcattgtagaggaatcaaagccaccaaagatgatgcttccgttgccatttccatgaacataaccggtgttgttaataagaccctccatgttttgg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
13116943 |
aaaattcattgtagaggaatcaaagccaccaaagatgatgcttccgttgccatttccatgaacataaccggtgttgttaataagaccctccatgttttgg |
13116844 |
T |
|
| Q |
201 |
gtgcccccgttggagaaagtgtcgggaggtggcttttggcgacgagcaacggcattggaaccattgcggttgcgtc |
276 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
13116843 |
gtgcccccgttggagaaagtgtcgggaggtggcttttggcgacgagcaacggcactggaaccattgcggttgcgtc |
13116768 |
T |
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