View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8525_high_9 (Length: 251)
Name: NF8525_high_9
Description: NF8525
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8525_high_9 |
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Alignment Details
Target: chr8 (Bit Score: 157; Significance: 1e-83; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 250
Target Start/End: Original strand, 34723413 - 34723658
Alignment:
| Q |
1 |
gaagtgtggaacagtgacaggtggacgcaaaaacgacaaacaacgtagttgtttg----aatggaaaaaa-gtgtttcaactatcaaccatttggattga |
95 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||||| |
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| T |
34723413 |
gaagtgtggaacagtgacaggtggacgcaaaaacgacaaacaacgtagttgtttgtttgaatggaaaaaaagtgtttcaactttcaaccatttggattga |
34723512 |
T |
|
| Q |
96 |
gcagagtagcataggccagagagacagtggacaggtggacgcaggaaagacaaaatgaagcaggtttcttcttctctctgtctcccttctccccacagca |
195 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
34723513 |
gcagag--------gccagagagacagtggacaggtggacgcaggaaagacaaaatgaagcaggtttcttcttctctctgtctccattctccccacagca |
34723604 |
T |
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| Q |
196 |
cacaacatattatgtgcannnnnnnncttctttcacaccggttttcgacacacca |
250 |
Q |
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|||||||||||||||||| | |||||||||||||||||||||||||| |
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| T |
34723605 |
cacaacatattatgtgcatttttttt-tgctttcacaccggttttcgacacacca |
34723658 |
T |
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