View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8527_low_2 (Length: 428)

Name: NF8527_low_2
Description: NF8527
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8527_low_2
NF8527_low_2
[»] chr6 (36 HSPs)
chr6 (156-428)||(33308689-33308961)
chr6 (156-428)||(33310958-33311230)
chr6 (156-428)||(29755003-29755275)
chr6 (156-428)||(26068606-26068878)
chr6 (156-428)||(26066335-26066607)
chr6 (208-374)||(4816584-4816751)
chr6 (154-346)||(11983374-11983564)
chr6 (156-298)||(8995259-8995400)
chr6 (156-298)||(9019706-9019847)
chr6 (156-346)||(14507520-14507712)
chr6 (185-346)||(19227753-19227916)
chr6 (156-346)||(15530467-15530657)
chr6 (349-428)||(4816552-4816632)
chr6 (357-428)||(20915665-20915736)
chr6 (156-270)||(32279798-32279910)
chr6 (156-244)||(1072304-1072391)
chr6 (372-428)||(1072184-1072240)
chr6 (247-323)||(26084819-26084895)
chr6 (236-346)||(30729173-30729284)
chr6 (372-428)||(8995430-8995486)
chr6 (372-428)||(9019877-9019933)
chr6 (372-428)||(11983336-11983392)
chr6 (374-426)||(14507484-14507536)
chr6 (372-428)||(15530429-15530485)
chr6 (372-428)||(15532988-15533044)
chr6 (372-428)||(15541447-15541503)
chr6 (156-188)||(4816750-4816782)
chr6 (372-428)||(19227715-19227771)
chr6 (372-428)||(30729135-30729191)
chr6 (372-428)||(32279948-32280004)
chr6 (399-428)||(2629197-2629226)
chr6 (399-428)||(3028157-3028186)
chr6 (399-428)||(12195822-12195851)
chr6 (399-428)||(30034914-30034943)
chr6 (247-323)||(22352216-22352292)
chr6 (247-323)||(28241691-28241767)
[»] chr8 (39 HSPs)
chr8 (156-374)||(44720621-44720839)
chr8 (156-368)||(18812672-18812883)
chr8 (156-428)||(43079351-43079614)
chr8 (156-368)||(18810487-18810698)
chr8 (156-428)||(43081726-43081986)
chr8 (154-300)||(14807550-14807695)
chr8 (156-346)||(12517371-12517561)
chr8 (156-346)||(27826786-27826976)
chr8 (156-346)||(27829097-27829287)
chr8 (159-346)||(15067784-15067971)
chr8 (156-346)||(15072510-15072700)
chr8 (156-291)||(28251988-28252122)
chr8 (349-428)||(44720792-44720871)
chr8 (156-270)||(4423839-4423952)
chr8 (349-428)||(18810657-18810736)
chr8 (349-428)||(18812842-18812921)
chr8 (177-270)||(3886322-3886416)
chr8 (372-428)||(14807723-14807779)
chr8 (372-428)||(28251874-28251930)
chr8 (277-346)||(4423938-4424008)
chr8 (372-428)||(2468405-2468461)
chr8 (372-428)||(4423990-4424046)
chr8 (372-428)||(15067953-15068009)
chr8 (376-428)||(15072686-15072738)
chr8 (372-428)||(27826958-27827014)
chr8 (372-428)||(27829269-27829325)
chr8 (376-428)||(3886225-3886277)
chr8 (256-300)||(28251958-28252002)
chr8 (373-428)||(17847501-17847556)
chr8 (399-428)||(6375988-6376017)
chr8 (399-428)||(15809214-15809243)
chr8 (399-428)||(24873494-24873523)
chr8 (399-428)||(28283532-28283561)
chr8 (399-428)||(31162212-31162241)
chr8 (399-428)||(32339304-32339333)
chr8 (399-428)||(43530123-43530152)
chr8 (376-428)||(12517333-12517385)
chr8 (247-323)||(22685035-22685111)
chr8 (397-425)||(31574054-31574082)
[»] chr3 (90 HSPs)
chr3 (156-428)||(50493680-50493951)
chr3 (156-375)||(53896532-53896750)
chr3 (156-346)||(5191377-5191567)
chr3 (156-346)||(18099513-18099703)
chr3 (156-374)||(38210071-38210288)
chr3 (160-374)||(6063785-6063998)
chr3 (156-373)||(5885987-5886204)
chr3 (208-374)||(25388652-25388818)
chr3 (185-346)||(5522958-5523120)
chr3 (164-373)||(5899471-5899679)
chr3 (156-346)||(22114648-22114838)
chr3 (156-346)||(1321165-1321355)
chr3 (156-346)||(10956370-10956559)
chr3 (68-155)||(49202869-49202956)
chr3 (156-284)||(18097291-18097418)
chr3 (156-346)||(26720272-26720462)
chr3 (349-428)||(6063753-6063832)
chr3 (350-428)||(25388772-25388850)
chr3 (156-346)||(32264386-32264576)
chr3 (349-428)||(6719416-6719495)
chr3 (154-282)||(10085481-10085607)
chr3 (154-282)||(10192401-10192527)
chr3 (350-428)||(53896501-53896579)
chr3 (351-428)||(5899635-5899712)
chr3 (160-270)||(6719532-6719643)
chr3 (255-346)||(3859350-3859442)
chr3 (247-346)||(10958666-10958766)
chr3 (349-428)||(5886158-5886237)
chr3 (156-270)||(38889761-38889875)
chr3 (156-270)||(11162895-11163008)
chr3 (156-346)||(24177003-24177193)
chr3 (349-426)||(38889912-38889989)
chr3 (372-428)||(35777317-35777373)
chr3 (373-428)||(38210265-38210320)
chr3 (276-346)||(6066140-6066210)
chr3 (371-428)||(6066102-6066159)
chr3 (277-373)||(38889861-38889958)
chr3 (156-270)||(35777167-35777280)
chr3 (277-374)||(6719448-6719546)
chr3 (156-236)||(7606881-7606959)
chr3 (372-428)||(18097206-18097262)
chr3 (372-428)||(26720444-26720500)
chr3 (156-268)||(11170149-11170260)
chr3 (156-244)||(48362095-48362182)
chr3 (372-428)||(3859424-3859480)
chr3 (372-428)||(5522920-5522976)
chr3 (372-428)||(11170300-11170356)
chr3 (372-428)||(15780756-15780812)
chr3 (372-428)||(18162560-18162616)
chr3 (372-428)||(22114610-22114666)
chr3 (372-428)||(32264348-32264404)
chr3 (372-428)||(48361975-48362031)
chr3 (156-244)||(32218840-32218927)
chr3 (277-346)||(35777266-35777335)
chr3 (372-428)||(1321337-1321393)
chr3 (247-323)||(4308648-4308724)
chr3 (372-428)||(10956332-10956388)
chr3 (372-428)||(10958628-10958684)
chr3 (372-428)||(11163046-11163102)
chr3 (372-428)||(18099476-18099531)
chr3 (372-428)||(45882835-45882891)
chr3 (372-427)||(5191549-5191604)
chr3 (252-323)||(9604979-9605050)
chr3 (372-427)||(10084699-10084754)
chr3 (276-346)||(10084736-10084807)
chr3 (376-427)||(10191619-10191670)
chr3 (247-298)||(45882753-45882804)
chr3 (250-323)||(43228108-43228181)
chr3 (376-428)||(12268271-12268323)
chr3 (372-428)||(24177175-24177231)
chr3 (372-428)||(24979603-24979659)
chr3 (247-323)||(27101627-27101703)
chr3 (247-323)||(35918316-35918392)
chr3 (156-195)||(6066249-6066287)
chr3 (276-346)||(10191656-10191727)
chr3 (280-346)||(11162997-11163064)
chr3 (372-427)||(32218991-32219046)
chr3 (277-346)||(11170248-11170318)
chr3 (399-428)||(455826-455855)
chr3 (399-428)||(458203-458232)
chr3 (399-428)||(746674-746703)
chr3 (399-428)||(4104204-4104233)
chr3 (399-428)||(10621847-10621876)
chr3 (399-428)||(25533357-25533386)
chr3 (399-428)||(42990205-42990234)
chr3 (399-428)||(53597164-53597193)
chr3 (372-428)||(13893289-13893345)
chr3 (247-323)||(25690723-25690799)
chr3 (400-428)||(47149205-47149233)
chr3 (247-323)||(51727373-51727449)
[»] scaffold0140 (2 HSPs)
scaffold0140 (156-428)||(21919-22191)
scaffold0140 (156-428)||(24194-24466)
[»] chr7 (41 HSPs)
chr7 (156-428)||(9027411-9027683)
chr7 (156-428)||(22136882-22137154)
chr7 (156-428)||(40551909-40552181)
chr7 (156-428)||(22107871-22108143)
chr7 (156-428)||(40549631-40549903)
chr7 (156-428)||(1047239-1047499)
chr7 (156-428)||(2935074-2935335)
chr7 (156-300)||(3878326-3878469)
chr7 (156-300)||(25542285-25542427)
chr7 (156-346)||(27306574-27306763)
chr7 (156-346)||(35383-35573)
chr7 (156-346)||(44318-44508)
chr7 (156-270)||(26804349-26804462)
chr7 (156-267)||(1049699-1049809)
chr7 (156-300)||(18567367-18567510)
chr7 (156-300)||(31435439-31435582)
chr7 (156-270)||(40837144-40837257)
chr7 (372-428)||(35555-35611)
chr7 (372-428)||(27306536-27306592)
chr7 (247-323)||(40946168-40946244)
chr7 (372-426)||(1049604-1049658)
chr7 (372-428)||(44490-44546)
chr7 (372-428)||(22392399-22392455)
chr7 (372-424)||(26804499-26804551)
chr7 (372-428)||(40837049-40837105)
chr7 (374-428)||(25542459-25542513)
chr7 (277-346)||(40837087-40837158)
chr7 (378-428)||(18567545-18567595)
chr7 (249-299)||(22392319-22392369)
chr7 (378-428)||(31435354-31435404)
chr7 (399-428)||(1606423-1606452)
chr7 (399-428)||(3035670-3035699)
chr7 (399-428)||(7349586-7349615)
chr7 (399-428)||(11757177-11757206)
chr7 (399-428)||(18345490-18345519)
chr7 (399-428)||(20299407-20299436)
chr7 (399-428)||(28485515-28485544)
chr7 (399-428)||(38393935-38393964)
chr7 (399-428)||(38396239-38396268)
chr7 (399-428)||(43253831-43253860)
chr7 (400-428)||(9680768-9680796)
[»] chr5 (69 HSPs)
chr5 (156-428)||(15354789-15355061)
chr5 (156-428)||(15357065-15357337)
chr5 (156-428)||(10756964-10757236)
chr5 (156-428)||(23664838-23665110)
chr5 (156-428)||(23793477-23793749)
chr5 (156-428)||(31542446-31542707)
chr5 (156-428)||(23667113-23667385)
chr5 (156-373)||(34477412-34477628)
chr5 (208-428)||(31179678-31179899)
chr5 (156-341)||(10749509-10749693)
chr5 (156-374)||(31544802-31545020)
chr5 (154-300)||(4236372-4236517)
chr5 (277-428)||(38960349-38960501)
chr5 (156-346)||(38881849-38882039)
chr5 (160-346)||(16775905-16776091)
chr5 (156-373)||(34479773-34479968)
chr5 (247-346)||(21684806-21684906)
chr5 (349-428)||(31544973-31545052)
chr5 (156-270)||(25921874-25921988)
chr5 (156-270)||(659717-659829)
chr5 (248-424)||(23742076-23742256)
chr5 (156-270)||(2174684-2174797)
chr5 (349-428)||(34477379-34477458)
chr5 (156-346)||(21947774-21947961)
chr5 (156-244)||(18186496-18186583)
chr5 (156-289)||(20504316-20504448)
chr5 (349-428)||(34479740-34479819)
chr5 (156-270)||(39797853-39797966)
chr5 (210-288)||(659850-659927)
chr5 (156-338)||(20507815-20507997)
chr5 (372-428)||(21684768-21684824)
chr5 (156-270)||(31466379-31466492)
chr5 (156-269)||(12556325-12556437)
chr5 (156-244)||(36402754-36402841)
chr5 (373-428)||(10749704-10749759)
chr5 (156-270)||(38960487-38960600)
chr5 (372-426)||(39798004-39798058)
chr5 (372-428)||(2818643-2818699)
chr5 (372-428)||(4236545-4236601)
chr5 (247-323)||(4409891-4409967)
chr5 (372-428)||(21947943-21947999)
chr5 (372-428)||(25921780-25921836)
chr5 (372-428)||(31466285-31466341)
chr5 (372-428)||(38882021-38882077)
chr5 (162-270)||(2818729-2818836)
chr5 (156-217)||(21684905-21684965)
chr5 (247-323)||(39854318-39854394)
chr5 (373-428)||(12556230-12556285)
chr5 (247-323)||(1240172-1240248)
chr5 (247-323)||(6744895-6744971)
chr5 (247-323)||(6747138-6747214)
chr5 (372-428)||(36402635-36402690)
chr5 (247-322)||(42238048-42238123)
chr5 (277-346)||(2174783-2174853)
chr5 (374-427)||(16776075-16776129)
chr5 (399-428)||(2144899-2144928)
chr5 (399-428)||(3373348-3373377)
chr5 (399-428)||(10586782-10586811)
chr5 (399-428)||(15552178-15552207)
chr5 (399-428)||(18468950-18468979)
chr5 (371-428)||(20507769-20507826)
chr5 (399-428)||(25803959-25803988)
chr5 (399-428)||(27910388-27910417)
chr5 (399-428)||(27912473-27912502)
chr5 (400-428)||(1189921-1189949)
chr5 (372-428)||(2174835-2174891)
chr5 (247-323)||(10529468-10529544)
chr5 (400-428)||(29748285-29748313)
chr5 (400-428)||(36208524-36208552)
[»] chr2 (38 HSPs)
chr2 (156-428)||(36559082-36559354)
chr2 (156-428)||(45332399-45332671)
chr2 (256-428)||(36561359-36561532)
chr2 (154-346)||(27104517-27104709)
chr2 (158-346)||(19502356-19502544)
chr2 (156-346)||(24162557-24162748)
chr2 (156-343)||(21521043-21521230)
chr2 (156-346)||(6259160-6259350)
chr2 (156-346)||(42064235-42064425)
chr2 (158-346)||(19504690-19504878)
chr2 (158-270)||(43623968-43624079)
chr2 (156-291)||(36561539-36561673)
chr2 (247-346)||(13910389-13910489)
chr2 (157-270)||(6264546-6264658)
chr2 (156-338)||(22407762-22407944)
chr2 (156-271)||(40032468-40032582)
chr2 (156-270)||(18800702-18800815)
chr2 (372-428)||(22407716-22407772)
chr2 (372-428)||(24162519-24162575)
chr2 (372-428)||(27104691-27104747)
chr2 (372-428)||(42064407-42064463)
chr2 (372-428)||(43623875-43623931)
chr2 (372-428)||(6264452-6264508)
chr2 (372-428)||(13910351-13910407)
chr2 (372-428)||(18800609-18800665)
chr2 (372-428)||(19504652-19504708)
chr2 (372-428)||(40032365-40032421)
chr2 (372-426)||(6259124-6259178)
chr2 (376-426)||(22287645-22287695)
chr2 (372-428)||(21521002-21521058)
chr2 (372-428)||(35107192-35107248)
chr2 (252-323)||(45280354-45280425)
chr2 (399-428)||(17897549-17897578)
chr2 (399-428)||(23452548-23452577)
chr2 (399-428)||(35215903-35215932)
chr2 (372-428)||(19502318-19502374)
chr2 (400-428)||(20589581-20589609)
chr2 (372-428)||(28462593-28462649)
[»] chr4 (77 HSPs)
chr4 (156-374)||(18846927-18847147)
chr4 (156-428)||(16932096-16932356)
chr4 (156-428)||(22783053-22783313)
chr4 (156-428)||(16934450-16934710)
chr4 (156-428)||(22780688-22780948)
chr4 (156-346)||(38408997-38409187)
chr4 (156-346)||(11006586-11006777)
chr4 (156-346)||(31849944-31850134)
chr4 (156-346)||(36919932-36920121)
chr4 (156-363)||(9176824-9177031)
chr4 (154-346)||(24888592-24888784)
chr4 (156-346)||(3824918-3825108)
chr4 (156-346)||(36921840-36922029)
chr4 (156-346)||(5637814-5638002)
chr4 (156-300)||(22803125-22803268)
chr4 (156-346)||(51015044-51015234)
chr4 (156-341)||(9174496-9174680)
chr4 (233-374)||(11008909-11009051)
chr4 (194-346)||(5198255-5198408)
chr4 (349-428)||(18847100-18847179)
chr4 (154-346)||(37089719-37089912)
chr4 (349-428)||(11008877-11008956)
chr4 (156-346)||(22044735-22044926)
chr4 (156-346)||(48486117-48486307)
chr4 (349-428)||(9176781-9176860)
chr4 (197-291)||(9148098-9148192)
chr4 (156-270)||(7941137-7941251)
chr4 (156-270)||(11434773-11434887)
chr4 (177-270)||(22801262-22801355)
chr4 (210-346)||(24880302-24880439)
chr4 (372-428)||(11006548-11006604)
chr4 (157-291)||(52942869-52943002)
chr4 (156-346)||(619792-619982)
chr4 (372-428)||(9174453-9174509)
chr4 (156-294)||(40091813-40091950)
chr4 (240-346)||(22047030-22047135)
chr4 (210-300)||(24878840-24878930)
chr4 (372-428)||(3824880-3824936)
chr4 (372-428)||(24888766-24888822)
chr4 (372-428)||(37089681-37089737)
chr4 (372-428)||(47274697-47274753)
chr4 (372-428)||(5198390-5198446)
chr4 (372-428)||(11434925-11434981)
chr4 (372-428)||(22801169-22801225)
chr4 (372-428)||(22803041-22803097)
chr4 (372-428)||(36919894-36919950)
chr4 (372-428)||(38409169-38409225)
chr4 (372-428)||(48486289-48486345)
chr4 (372-427)||(24880421-24880476)
chr4 (372-426)||(5637778-5637832)
chr4 (258-346)||(52942792-52942881)
chr4 (372-428)||(7941289-7941345)
chr4 (372-428)||(9148221-9148277)
chr4 (372-428)||(22044697-22044753)
chr4 (372-428)||(36921802-36921858)
chr4 (376-428)||(40091722-40091774)
chr4 (372-428)||(51015216-51015272)
chr4 (372-427)||(22046993-22047048)
chr4 (376-427)||(24878963-24879014)
chr4 (277-346)||(11434873-11434943)
chr4 (372-426)||(52942756-52942810)
chr4 (250-322)||(4556422-4556494)
chr4 (372-428)||(8756557-8756613)
chr4 (247-323)||(16689303-16689379)
chr4 (374-428)||(619754-619808)
chr4 (246-295)||(8529011-8529060)
chr4 (399-428)||(14787740-14787769)
chr4 (399-428)||(17662545-17662574)
chr4 (399-428)||(22132706-22132735)
chr4 (399-428)||(22134937-22134966)
chr4 (399-428)||(24348211-24348240)
chr4 (399-428)||(25357634-25357663)
chr4 (399-428)||(47211053-47211082)
chr4 (399-428)||(53405124-53405153)
chr4 (372-428)||(31849906-31849962)
chr4 (247-323)||(47868289-47868365)
chr4 (400-428)||(52043737-52043765)
[»] scaffold0472 (2 HSPs)
scaffold0472 (156-363)||(5931-6137)
scaffold0472 (349-428)||(6101-6180)
[»] chr1 (62 HSPs)
chr1 (154-374)||(16225889-16226107)
chr1 (156-375)||(47177082-47177299)
chr1 (156-375)||(47179432-47179650)
chr1 (256-428)||(23783362-23783523)
chr1 (156-346)||(10400175-10400365)
chr1 (156-346)||(51752108-51752299)
chr1 (156-346)||(13761581-13761771)
chr1 (156-346)||(15823290-15823480)
chr1 (156-346)||(20302202-20302393)
chr1 (156-346)||(51749782-51749973)
chr1 (158-346)||(28840424-28840612)
chr1 (172-346)||(6823643-6823818)
chr1 (210-346)||(28842290-28842427)
chr1 (277-374)||(16231444-16231541)
chr1 (349-428)||(16231494-16231573)
chr1 (156-270)||(6822779-6822893)
chr1 (349-428)||(16226060-16226139)
chr1 (350-428)||(47177252-47177330)
chr1 (350-428)||(47179603-47179681)
chr1 (157-302)||(3580010-3580154)
chr1 (208-346)||(41646715-41646854)
chr1 (211-346)||(30790741-30790877)
chr1 (190-346)||(13214858-13215015)
chr1 (208-346)||(28207413-28207552)
chr1 (156-270)||(49687305-49687418)
chr1 (156-297)||(39462262-39462402)
chr1 (156-252)||(38925899-38925994)
chr1 (156-243)||(47451409-47451495)
chr1 (372-428)||(13214997-13215053)
chr1 (247-323)||(13449919-13449995)
chr1 (372-428)||(13761753-13761809)
chr1 (372-428)||(15823462-15823518)
chr1 (372-428)||(28207375-28207431)
chr1 (372-428)||(28840594-28840650)
chr1 (372-428)||(41646836-41646892)
chr1 (372-428)||(51749955-51750011)
chr1 (372-428)||(51752281-51752337)
chr1 (156-258)||(20291284-20291386)
chr1 (372-428)||(10400137-10400193)
chr1 (372-428)||(30790703-30790759)
chr1 (372-428)||(38925787-38925843)
chr1 (372-428)||(39462435-39462491)
chr1 (372-428)||(47451564-47451620)
chr1 (180-270)||(16231368-16231458)
chr1 (376-428)||(3579927-3579979)
chr1 (372-428)||(6822931-6822987)
chr1 (372-428)||(6823800-6823856)
chr1 (156-236)||(23783242-23783320)
chr1 (376-428)||(28842413-28842465)
chr1 (378-428)||(14098279-14098329)
chr1 (399-428)||(2510637-2510666)
chr1 (399-428)||(9459732-9459761)
chr1 (399-428)||(9463559-9463588)
chr1 (399-428)||(12302819-12302848)
chr1 (399-428)||(18800878-18800907)
chr1 (389-426)||(20291390-20291427)
chr1 (399-428)||(24325599-24325628)
chr1 (399-428)||(31735834-31735863)
chr1 (399-428)||(43104102-43104131)
chr1 (399-428)||(46432037-46432066)
chr1 (399-428)||(47906207-47906236)
chr1 (376-428)||(20302379-20302431)
[»] scaffold0250 (2 HSPs)
scaffold0250 (156-346)||(2633-2823)
scaffold0250 (372-428)||(2805-2861)
[»] scaffold0127 (1 HSPs)
scaffold0127 (156-339)||(12868-13050)
[»] scaffold0025 (4 HSPs)
scaffold0025 (154-346)||(69640-69831)
scaffold0025 (154-270)||(73427-73542)
scaffold0025 (372-428)||(69602-69658)
scaffold0025 (372-428)||(73334-73390)
[»] scaffold0131 (2 HSPs)
scaffold0131 (156-346)||(14771-14962)
scaffold0131 (372-428)||(14944-15000)
[»] scaffold0068 (3 HSPs)
scaffold0068 (247-346)||(29004-29104)
scaffold0068 (372-428)||(29086-29142)
scaffold0068 (156-217)||(28945-29005)
[»] scaffold0339 (1 HSPs)
scaffold0339 (372-428)||(3922-3978)
[»] scaffold0005 (1 HSPs)
scaffold0005 (399-428)||(51961-51990)
[»] scaffold0038 (1 HSPs)
scaffold0038 (247-323)||(41853-41929)


Alignment Details
Target: chr6 (Bit Score: 163; Significance: 6e-87; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 156 - 428
Target Start/End: Original strand, 33308689 - 33308961
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgagg-caaggtactggaaa 254  Q
    ||||||||||||||||||||||| ||||||||| |||||| ||  ||||||| |||||||||||| |||||||| ||||||  || ||||| ||||||||    
T  33308689 agagttaacttaaaatcaggttt-ctgcagaatcgtggcacgacggctgggcttcgtggcacgat-ggaggttttagttttttgggcaaggcactggaaa 33308786  T
Q  255 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatatttttggatgcagatttgttaca-aatttaatgcag 353  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||   |||  | |||    
T  33308787 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatatttttgggagcagatttgttacattttttgttacag 33308886  T
Q  354 atttgttacaaatttaaagcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||| | |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  33308887 atttgttacaaattttaggcagatttgttatagattttaagcaggacttttactataaatatagaccttgtatca 33308961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 156 - 428
Target Start/End: Original strand, 33310958 - 33311230
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgagg-caaggtactggaaa 254  Q
    ||||||||||||||||||||||| ||||||||| |||||| ||  ||||||| |||||||||||| |||||||| ||||||  || ||||| ||||||||    
T  33310958 agagttaacttaaaatcaggttt-ctgcagaatcgtggcacgacggctgggcttcgtggcacgat-ggaggttttagttttttgggcaaggcactggaaa 33311055  T
Q  255 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatatttttggatgcagatttgttaca-aatttaatgcag 353  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||   |||  | |||    
T  33311056 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatatttttgggagcagatttgttacagtttttgttacag 33311155  T
Q  354 atttgttacaaatttaaagcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||| | |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  33311156 atttgttacaaattttaggcagatttgttatagattttaagcaggacttttactataaatatagaccttgtatca 33311230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 156 - 428
Target Start/End: Complemental strand, 29755275 - 29755003
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgagg-caaggtactggaaa 254  Q
    ||||||||||||||||||||||| ||||| ||| |||||| ||  ||||||| ||| |||||||| |||||||| ||||||  || ||||| ||||||||    
T  29755275 agagttaacttaaaatcaggttt-ctgcacaatcgtggcacgacggctgggcttcgcggcacgat-ggaggttttagttttttgggcaaggcactggaaa 29755178  T
Q  255 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatatttttggatgcagatttgttaca-aatttaatgcag 353  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||   |||  | |||    
T  29755177 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatatttttgggagcagatttgttacagtttttgttacag 29755078  T
Q  354 atttgttacaaatttaaagcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  29755077 atttgttacaaatttaaggcagatttgttatagattttaagcaggacttttactataaatatagaccttgtatca 29755003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 151; E-Value: 9e-80
Query Start/End: Original strand, 156 - 428
Target Start/End: Complemental strand, 26068878 - 26068606
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgagg-caaggtactggaaa 254  Q
    ||||||||||||||||||||||| ||||||||| |||||| ||  ||  |||| ||||||| ||| |||||||| ||||||  || ||||| ||||||||    
T  26068878 agagttaacttaaaatcaggttt-ctgcagaatcgtggcacgacggcaaggcaacgtggcatgat-ggaggttttagttttttgggcaaggcactggaaa 26068781  T
Q  255 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatatttttggatgcagatttgtta-caaatttaatgcag 353  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||  |||||||||||| |   |||  | |||    
T  26068780 aatcgtggcacgatggggtctcatcgtggcacgatggtgcgctggcggataaaaataaaacgtatttttgggagcagatttgttaccgtttttgttacag 26068681  T
Q  354 atttgttacaaatttaaagcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  26068680 atttgttacaaatttaaagcagatttgttacagattttaagcaggacttttactataaatatagaccttgtatca 26068606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 156 - 428
Target Start/End: Complemental strand, 26066607 - 26066335
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagtt-ttgaggcaaggtactggaaa 254  Q
    ||||||||||||||||||||||| ||| ||||| |||||| ||  ||  |||| ||||||||||| |||||||| |||| ||  ||||||| ||||||||    
T  26066607 agagttaacttaaaatcaggttt-ctgtagaatcgtggcacgacggcaaggcaacgtggcacgat-ggaggttttagttatttgggcaaggcactggaaa 26066510  T
Q  255 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatatttttggatgcagatttgttaca-aatttaatgcag 353  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| |||||||||  ||||||||||||||   |||  | |||    
T  26066509 aatcgtggcacgatggggtctcatcgtggcacaatggtgcgctggcggataaaaataaaacgtatttttgggagcagatttgttacagtttttgttacag 26066410  T
Q  354 atttgttacaaatttaaagcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  26066409 atttgttacaaatttaaagtagatttgttacagattttaagcaggacttttactataaatatagaccttgtatca 26066335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 208 - 374
Target Start/End: Complemental strand, 4816751 - 4816584
Alignment:
Q  208 atcgtggcacgattggaggtttcagttttgaggcaaggtactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaa 307  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  |  |||    
T  4816751 atcgtggcacgattggaggtttcagttttgaggcaaggtactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgtgctggtagcaaaa 4816652  T
Q  308 aataaaacatatttttggatgcagatttgttaca-aatttaatgcagatttgttacaaatttaaagca 374  Q
    |   |||||||||||| | ||||||||||||||| | ||| | |||||||||||||| |||| |||||    
T  4816651 acagaaacatattttttggtgcagatttgttacagatttttaagcagatttgttacagattttaagca 4816584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 154 - 346
Target Start/End: Complemental strand, 11983564 - 11983374
Alignment:
Q  154 taagagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgaggcaaggtactggaa 253  Q
    ||||||||||||||||||||||||| ||||||||| |||| | ||| | |||||| | ||| ||||| ||||||||||||| ||||| |||  |||||||    
T  11983564 taagagttaacttaaaatcaggttt-ctgcagaatcgtggtacgatggttgggcaacatggtacgat-ggaggtttcagttgtgaggtaagc-actggaa 11983468  T
Q  254 aaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttggatgcagatttgttacaaattt 346  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |  ||||| | |||||||||||||  |||||||||||| |||||||    
T  11983467 aaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcagcgaaaaacagaaacatatttttgagtgcagatttgtttcaaattt 11983374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 156 - 298
Target Start/End: Original strand, 8995259 - 8995400
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcag-aattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgaggcaaggtactggaaa 254  Q
    |||||||||||||||||||| |  ||| || ||| |||||| ||| |||||||| |||||||||||||||||||||||||||  ||||||| ||||||||    
T  8995259 agagttaacttaaaatcaggat--ctgtaggaatcgtggcacgatggctgggcaacgtggcacgattggaggtttcagtttttgggcaaggcactggaaa 8995356  T
Q  255 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctg 298  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  8995357 aatcgtggcacgatggggtcacatcgtggcacgatggtgcgctg 8995400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 156 - 298
Target Start/End: Original strand, 9019706 - 9019847
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcag-aattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgaggcaaggtactggaaa 254  Q
    |||||||||||||||||||| |  ||| || ||| |||||| ||| |||||||| |||||||||||||||||||||||||||  ||||||| ||||||||    
T  9019706 agagttaacttaaaatcaggat--ctgtaggaatcgtggcacgatggctgggcaacgtggcacgattggaggtttcagtttttgggcaaggcactggaaa 9019803  T
Q  255 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctg 298  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  9019804 aatcgtggcacgatggggtcacatcgtggcacgatggtgcgctg 9019847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 156 - 346
Target Start/End: Complemental strand, 14507712 - 14507520
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagtttt---gaggcaaggtactgga 252  Q
    ||||||||||||||||||| ||| ||||||||| |||||| ||| |||||||| ||||||||||| |||||||||||||||   ||  ||||| ||||||    
T  14507712 agagttaacttaaaatcagattt-ctgcagaatcgtggcacgatggctgggcaacgtggcacgat-ggaggtttcagtttttttgatacaaggcactgga 14507615  T
Q  253 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttggatgcagatttgttacaaattt 346  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| | |  ||||| | |||||||||||||  || ||||||||| |||||||    
T  14507614 aaaatggtggcacgatggggtcgcatcgtggcacgatggtgcgctgccagcgaaaaacagaaacatatttttgagtgtagatttgttccaaattt 14507520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 185 - 346
Target Start/End: Complemental strand, 19227916 - 19227753
Alignment:
Q  185 gaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagtttt-gaggcaaggtactggaaaaatcgtggcacgatggggtcgcatcgtgg 283  Q
    |||| |||||| ||| | |||||| ||||||| ||| |||||||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||||    
T  19227916 gaatcgtggcacgatggttgggcaacgtggcatgat-ggaggtttcaatttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtgg 19227818  T
Q  284 cacgatggtgcgctggcggataaaaata-aaacata-tttttggatgcagatttgttacaaattt 346  Q
    |||||||||||||||||||  || || | ||||||| ||||||| |||||||||||| |||||||    
T  19227817 cacgatggtgcgctggcggcgaataacagaaacatattttttgggtgcagatttgttccaaattt 19227753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 156 - 346
Target Start/End: Complemental strand, 15530657 - 15530467
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcag-aattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgaggcaaggtactggaaa 254  Q
    |||||||||||||||||||| |  |||||| ||| |||||| ||| |||||| | |||||||| |||||||||||||  |||||||||| | ||| ||||    
T  15530657 agagttaacttaaaatcaggat--ctgcaggaatcgtggcacgatggctgggtaacgtggcacaattggaggtttcaagtttgaggcaaagcactcgaaa 15530560  T
Q  255 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttggatgcagatttgttacaaattt 346  Q
    | |||||| ||||||||| |||||||||||||||||||| |||||| |  ||  ||| |||||||||||||| ||||| |||||| |||||||    
T  15530559 attcgtggtacgatggggccgcatcgtggcacgatggtgtgctggcagtgaattatagaaacatatttttgggtgcaggtttgttccaaattt 15530467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 349 - 428
Target Start/End: Complemental strand, 4816632 - 4816552
Alignment:
Q  349 tgcagatttgttacaaattta-aagcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||| ||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4816632 tgcagatttgttacagatttttaagcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 4816552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 357 - 428
Target Start/End: Complemental strand, 20915736 - 20915665
Alignment:
Q  357 tgttacaaatttaaagcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20915736 tgttacagattttaagcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 20915665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 156 - 270
Target Start/End: Original strand, 32279798 - 32279910
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcag-aattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgaggcaaggtactggaaa 254  Q
    |||||||||||||||||||   |||||||| ||  ||| || ||||| |||||| ||||||||||||||| ||||||||| |||||||||   |||||||    
T  32279798 agagttaacttaaaatcag---ttctgcaggaaacgtgacacgattgttgggcaacgtggcacgattggatgtttcagttctgaggcaagtcgctggaaa 32279894  T
Q  255 aatcgtggcacgatgg 270  Q
    | ||||||||||||||    
T  32279895 agtcgtggcacgatgg 32279910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 156 - 244
Target Start/End: Complemental strand, 1072391 - 1072304
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaatt-gtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgaggcaag 244  Q
    ||||||||||||||||||||||  |||||||| | |||| | ||| | |||||| |||||||||||||||||||| ||||||||||||||    
T  1072391 agagttaacttaaaatcaggtt--ctgcagaaatcgtggtacgatggttgggcaacgtggcacgattggaggtttaagttttgaggcaag 1072304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 372 - 428
Target Start/End: Complemental strand, 1072240 - 1072184
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || ||||||||||| ||||||||||||||||||||| ||||||||    
T  1072240 gcagatttgttccaaattttaagcaatacttttactataaatatagacattgtatca 1072184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 247 - 323
Target Start/End: Original strand, 26084819 - 26084895
Alignment:
Q  247 actggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatattttt 323  Q
    ||||||||||||||| |||||| |  ||||||||||||||||||||||| | |  |||||||||||||| |||||||    
T  26084819 actggaaaaatcgtgccacgattgaatcgcatcgtggcacgatggtgcgattgaagataaaaataaaacgtattttt 26084895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 236 - 346
Target Start/End: Complemental strand, 30729284 - 30729173
Alignment:
Q  236 tgaggcaaggtactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttggatgcagatt 334  Q
    |||||||||  ||||||||  ||||| |||||||||||| || ||||||||||| |||||||||| |  || || | |||| ||||||||| ||||||||    
T  30729284 tgaggcaagtcactggaaatttcgtgccacgatggggtcacaacgtggcacgatagtgcgctggcagcgaataacagaaacgtatttttgggtgcagatt 30729185  T
Q  335 tgttacaaattt 346  Q
    |||| |||||||    
T  30729184 tgttccaaattt 30729173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 372 - 428
Target Start/End: Original strand, 8995430 - 8995486
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || ||||||||| | |||||||||||||||||||| |||||||||    
T  8995430 gcagatttgttccaaattttaagcgatacttttactataaatatagatcttgtatca 8995486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 372 - 428
Target Start/End: Original strand, 9019877 - 9019933
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || ||||||||| | |||||||||||||||||||| |||||||||    
T  9019877 gcagatttgttccaaattttaagcgatacttttactataaatatagatcttgtatca 9019933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 372 - 428
Target Start/End: Complemental strand, 11983392 - 11983336
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || ||||||| | | ||||||||||||||||||||||||||||||    
T  11983392 gcagatttgtttcaaattttaaacgaaacttttactataaatatagaccttgtatca 11983336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 374 - 426
Target Start/End: Complemental strand, 14507536 - 14507484
Alignment:
Q  374 agatttgttacagattttaagcaagacttttactataaatatagaccttgtat 426  Q
    ||||||||| || ||||||||| | ||||||||||||||||||||||||||||    
T  14507536 agatttgttccaaattttaagcgatacttttactataaatatagaccttgtat 14507484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 372 - 428
Target Start/End: Complemental strand, 15530485 - 15530429
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    |||| |||||| || ||||||||| | ||||||||||||||||||||||||||||||    
T  15530485 gcaggtttgttccaaattttaagcgatacttttactataaatatagaccttgtatca 15530429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 372 - 428
Target Start/End: Complemental strand, 15533044 - 15532988
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || ||||||||  | ||||||||||||||||||||||||||||||    
T  15533044 gcagatttgttccaaattttaagttatacttttactataaatatagaccttgtatca 15532988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 372 - 428
Target Start/End: Complemental strand, 15541503 - 15541447
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || ||||||||  | ||||||||||||||||||||||||||||||    
T  15541503 gcagatttgttccaaattttaagttacacttttactataaatatagaccttgtatca 15541447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 188
Target Start/End: Complemental strand, 4816782 - 4816750
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaat 188  Q
    |||||||||||||||||||||||||||||||||    
T  4816782 agagttaacttaaaatcaggttttctgcagaat 4816750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 372 - 428
Target Start/End: Complemental strand, 19227771 - 19227715
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || ||||||||  | |||||||||||||||||||| |||||||||    
T  19227771 gcagatttgttccaaattttaagggaaacttttactataaatatagatcttgtatca 19227715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 372 - 428
Target Start/End: Complemental strand, 30729191 - 30729135
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || |||||||||   |||||||||||||||||||| |||||||||    
T  30729191 gcagatttgttccaaattttaagcggtacttttactataaatatagatcttgtatca 30729135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 372 - 428
Target Start/End: Original strand, 32279948 - 32280004
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || ||||||||| | |||||| ||||| |||||||||||||||||    
T  32279948 gcagatttgttccaaattttaagcgatacttttcctatatatatagaccttgtatca 32280004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 399 - 428
Target Start/End: Complemental strand, 2629226 - 2629197
Alignment:
Q  399 acttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||||||||||||||||||    
T  2629226 acttttactataaatatagaccttgtatca 2629197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 399 - 428
Target Start/End: Complemental strand, 3028186 - 3028157
Alignment:
Q  399 acttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||||||||||||||||||    
T  3028186 acttttactataaatatagaccttgtatca 3028157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 399 - 428
Target Start/End: Complemental strand, 12195851 - 12195822
Alignment:
Q  399 acttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||||||||||||||||||    
T  12195851 acttttactataaatatagaccttgtatca 12195822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 399 - 428
Target Start/End: Complemental strand, 30034943 - 30034914
Alignment:
Q  399 acttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||||||||||||||||||    
T  30034943 acttttactataaatatagaccttgtatca 30034914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 247 - 323
Target Start/End: Complemental strand, 22352292 - 22352216
Alignment:
Q  247 actggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatattttt 323  Q
    ||||||||||| ||| |||||| || ||| |||||| |||||||||||| | |  |||||||| ||||| |||||||    
T  22352292 actggaaaaattgtgccacgattggatcgaatcgtgccacgatggtgcgattgaagataaaaacaaaacgtattttt 22352216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 247 - 323
Target Start/End: Complemental strand, 28241767 - 28241691
Alignment:
Q  247 actggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatattttt 323  Q
    ||||||||||||||| |||||| |  ||| |||||| |||||| ||||| | |  |||||||||||||| |||||||    
T  28241767 actggaaaaatcgtgccacgattgtatcgaatcgtgccacgatagtgcgattgaagataaaaataaaacgtattttt 28241691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 159; Significance: 2e-84; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 156 - 374
Target Start/End: Original strand, 44720621 - 44720839
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgaggcaaggtactggaaaa 255  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  44720621 agagttaacttaaaatcaggttttctgcagaatcgtggcatgattgctgggcattgtggcacgtttggaggtttcagttttgaggcaaggtactggaaaa 44720720  T
Q  256 atcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatatttttggatgcagatttgttacaaatttaatgcagat 355  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |  ||||   |||||||||||||| ||||||||||||||| |||| | ||||||    
T  44720721 atcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcagcaaaaacagaaacatatttttgggtgcagatttgttacagattttaagcagat 44720820  T
Q  356 ttgttacaaatttaaagca 374  Q
    |||||||| |||| |||||    
T  44720821 ttgttacagattttaagca 44720839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 156 - 368
Target Start/End: Original strand, 18812672 - 18812883
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttg-aggcaaggtactggaaa 254  Q
    ||||||||||||||||||||||| ||| ||||| |||||| ||  |||||||| ||||||||||| |||||||| ||||||  |||||||| ||||||||    
T  18812672 agagttaacttaaaatcaggttt-ctgaagaatcgtggcacgacggctgggcaacgtggcacgat-ggaggttttagttttttaggcaaggcactggaaa 18812769  T
Q  255 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatatttttggatgcagatttgttacaaatttaatgcaga 354  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||   |||||    
T  18812770 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatatttttgggtgcagatttgttacagattttgagcaga 18812869  T
Q  355 tttgttacaaattt 368  Q
    ||||||||||||||    
T  18812870 tttgttacaaattt 18812883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 156 - 428
Target Start/End: Original strand, 43079351 - 43079614
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgagg-caaggtactggaaa 254  Q
    ||||||||||||||||||||||| ||||||||| |||||| ||  ||  |||| ||||||||||| |||||||| ||||||  || ||||| ||||||||    
T  43079351 agagttaacttaaaatcaggttt-ctgcagaatcgtggcacgacggcaaggcaacgtggcacgat-ggaggttttagttttttgggcaaggcactggaaa 43079448  T
Q  255 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatatttttggatgcagatttgttacaaatttaatgcaga 354  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| |||||  |||||||||||| |  |||            
T  43079449 aatcgtggtacgatggggtctcatcgtggcacgatggtgcgctggcggataaaaataaaacgtatctttgggagcagatttgttatagtttt-------- 43079540  T
Q  355 tttgttacaaatttaaagcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||| ||||| |||| |||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  43079541 ttttttacagattttaagcagatttgttatagattttaagcaggacttttactataaatatagaccttgtatca 43079614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 156 - 368
Target Start/End: Original strand, 18810487 - 18810698
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttg-aggcaaggtactggaaa 254  Q
    ||||||||||||||||||||||| ||||||||| |||||| ||  |||||||| ||||||||||| |||||||| | ||||  |||||||| ||||||||    
T  18810487 agagttaacttaaaatcaggttt-ctgcagaatcgtggcacgacggctgggcaacgtggcacgat-ggaggttttatttttttaggcaaggcactggaaa 18810584  T
Q  255 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatatttttggatgcagatttgttacaaatttaatgcaga 354  Q
    ||| | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| ||||   |||||    
T  18810585 aattgcggcacgatggggtcacatcgtggcacgatggtgcgctggcggataaaaataaaacacatttttgggtgcagatttgttacagattttgagcaga 18810684  T
Q  355 tttgttacaaattt 368  Q
    ||||||||||||||    
T  18810685 tttgttacaaattt 18810698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 156 - 428
Target Start/End: Original strand, 43081726 - 43081986
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgagg-caaggtactggaaa 254  Q
    ||||||||||||||||||||||| ||||||||| |||||| ||  ||  ||||  |||||||||| |||||||| ||||||  || ||||| ||||||||    
T  43081726 agagttaacttaaaatcaggttt-ctgcagaatcgtggcacgacggcaaggcaaagtggcacgat-ggaggttttagttttttgggcaaggcactggaaa 43081823  T
Q  255 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatatttttggatgcagatttgttacaaatttaatgcaga 354  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| ||| |||||  ||||||||||||            ||     
T  43081824 aatcgtggcacgatggggtctcatcgtggcacgatggtacgctggcggataaaaataaaacgtatctttgggagcagatttgtta-----------tagt 43081912  T
Q  355 tttgttacaaatttaaagcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||| |||| |||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  43081913 tttgttacagattttaagcagatttgttatagattttaagcaggacttttactataaatatagaccttgtatca 43081986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 154 - 300
Target Start/End: Original strand, 14807550 - 14807695
Alignment:
Q  154 taagagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgaggcaaggtactggaa 253  Q
    ||||||||||||||||||||||||| ||||||||| |||||||||| | |||||| |||| |||||||||||||||||  |||||||||| | |||||||    
T  14807550 taagagttaacttaaaatcaggttt-ctgcagaatcgtggcatgatggttgggcaacgtgacacgattggaggtttcaagtttgaggcaaagcactggaa 14807648  T
Q  254 aaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggc 300  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||    
T  14807649 aaatcgtggcacgatggggtcgcatcgtggcacggtggtgcgctggc 14807695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 156 - 346
Target Start/End: Complemental strand, 12517561 - 12517371
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcag-aattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgaggcaaggtactggaaa 254  Q
    |||||||||||||||||||| |  |||||| ||| |||||| ||| ||  |||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  12517561 agagttaacttaaaatcaggat--ctgcaggaatcgtggcacgatggcaaggcaacgtggcacgattggaggtttcagttttgaggcaatgtactggaaa 12517464  T
Q  255 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttggatgcagatttgttacaaattt 346  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||| |  ||||| | |||||||||||||  |||| ||||||| |||||||    
T  12517463 aatcgtggcacgatgggatcgcatcgtggcacgatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcaaatttgttccaaattt 12517371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 156 - 346
Target Start/End: Original strand, 27826786 - 27826976
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcag-aattgtggcatgattgctgggcatcgtggcacgattggaggtttcagtttt-gaggcaaggtactggaa 253  Q
    |||||||||||||||||||| |  |||||| ||| |||||| |||||||||||| ||||||||||| |||||||||| |||| || |||| | |||||||    
T  27826786 agagttaacttaaaatcaggat--ctgcaggaatcgtggcacgattgctgggcaacgtggcacgat-ggaggtttcattttttgaagcaaagcactggaa 27826882  T
Q  254 aaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaa-taaaacatatttttggatgcagatttgttacaaattt 346  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| |  |||||  ||||||||||||||  |||||||||||| |||||||    
T  27826883 aaatcgtggcacgatgggatcgcatcgtggcacgatggtgcgctggcagcgaaaaacaaaaacatatttttgagtgcagatttgttccaaattt 27826976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 156 - 346
Target Start/End: Original strand, 27829097 - 27829287
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcag-aattgtggcatgattgctgggcatcgtggcacgattggaggtttcagtttt-gaggcaaggtactggaa 253  Q
    |||||||||||||||||||| |  |||||| ||| |||||| |||||||||||| ||||||||||| |||||||||| |||| |||||||   |||||||    
T  27829097 agagttaacttaaaatcaggat--ctgcaggaatcgtggcacgattgctgggcaacgtggcacgat-ggaggtttcattttttgaggcaaaacactggaa 27829193  T
Q  254 aaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaa-taaaacatatttttggatgcagatttgttacaaattt 346  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| |  |||||  ||||||||||||||  |||||||||||| |||||||    
T  27829194 aaatcgtggcacgatgggatcgcatcgtggcacgatggtgcgctggcagcgaaaaacaaaaacatatttttgagtgcagatttgttccaaattt 27829287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 159 - 346
Target Start/End: Original strand, 15067784 - 15067971
Alignment:
Q  159 gttaacttaaaatcaggttttctgcag-aattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgaggcaaggtactggaaaaat 257  Q
    |||||||||||||||| ||||  |||| ||| |||||| ||| |||||||| | ||||||||||||||||||||||||||| |||||  |||||||||||    
T  15067784 gttaacttaaaatcagatttt--gcaggaatcgtggcaagatggctgggcaacatggcacgattggaggtttcagttttgaagcaagccactggaaaaat 15067881  T
Q  258 cgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataa-aaataaaacatatttttggatgcagatttgttacaaattt 346  Q
    | || ||||||||| ||||| |||||||||||||||||||||| |  || ||  ||||| ||||||||| |||||||||||| |||||||    
T  15067882 catgccacgatgggatcgcaacgtggcacgatggtgcgctggcagcgaataacaaaaacgtatttttgggtgcagatttgttccaaattt 15067971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 156 - 346
Target Start/End: Original strand, 15072510 - 15072700
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcag-aattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgaggcaaggtactggaaa 254  Q
    ||||||||||||||||||| ||  |||||| ||| ||| || ||| |||||||| |||| |||||||||||||||||||||||| |||||  ||| ||||    
T  15072510 agagttaacttaaaatcagatt--ctgcaggaatcgtgacacgatggctgggcaacgtgacacgattggaggtttcagttttgaagcaagccactagaaa 15072607  T
Q  255 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttggatgcagatttgttacaaattt 346  Q
    ||||||| ||||||||| ||||| ||||||| |||||||||||||| |  || || | |||| ||||||||| |||| ||||||| |||||||    
T  15072608 aatcgtgtcacgatgggatcgcaacgtggcatgatggtgcgctggcagcgaataacagaaacgtatttttgggtgcaaatttgttccaaattt 15072700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 156 - 291
Target Start/End: Complemental strand, 28252122 - 28251988
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcag-aattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgaggcaaggtactggaaa 254  Q
    |||||||||||||||||||| |  |||||| ||| |||||| ||| ||| |||| ||||| ||||||||||||||||  |||||||||| | ||||||||    
T  28252122 agagttaacttaaaatcaggat--ctgcaggaatcgtggcacgatggctaggcaacgtggtacgattggaggtttcaagtttgaggcaaagcactggaaa 28252025  T
Q  255 aatcgtggcacgatggggtcgcatcgtggcacgatgg 291  Q
    ||||||||||||||||| |||||||||||||||||||    
T  28252024 aatcgtggcacgatgggatcgcatcgtggcacgatgg 28251988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 349 - 428
Target Start/End: Original strand, 44720792 - 44720871
Alignment:
Q  349 tgcagatttgttacaaatttaaagcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  44720792 tgcagatttgttacagattttaagcagatttgttacagattttaagcaagacttttactataaatatagaccttatatca 44720871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 156 - 270
Target Start/End: Original strand, 4423839 - 4423952
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcag-aattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgaggcaaggtactggaaa 254  Q
    |||||||||||||||||| | |  |||||| ||| ||||||  ||||||||||| |||||||| |||||||||||||||||| |||||||| ||||||||    
T  4423839 agagttaacttaaaatcaagat--ctgcaggaatcgtggcacaattgctgggcaacgtggcacaattggaggtttcagttttaaggcaaggcactggaaa 4423936  T
Q  255 aatcgtggcacgatgg 270  Q
    ||||||||||||||||    
T  4423937 aatcgtggcacgatgg 4423952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 349 - 428
Target Start/End: Original strand, 18810657 - 18810736
Alignment:
Q  349 tgcagatttgttacaaatttaaagcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||| ||||  ||||||||||||||| ||||||||  | |||||||||||||||||||| |||||||||    
T  18810657 tgcagatttgttacagattttgagcagatttgttacaaattttaagggaaacttttactataaatatagatcttgtatca 18810736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 349 - 428
Target Start/End: Original strand, 18812842 - 18812921
Alignment:
Q  349 tgcagatttgttacaaatttaaagcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||| ||||  ||||||||||||||| ||||||||  | |||||||||||||||||||| |||||||||    
T  18812842 tgcagatttgttacagattttgagcagatttgttacaaattttaagggaaacttttactataaatatagatcttgtatca 18812921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 177 - 270
Target Start/End: Complemental strand, 3886416 - 3886322
Alignment:
Q  177 tttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagtttt--gaggcaaggtactggaaaaatcgtggcacgatgg 270  Q
    |||||||||||| ||| |||||| ||||| || ||||||||||| |||||||||||||||  ||||||||  |||||||||||||||| |||||||    
T  3886416 tttctgcagaatcgtgacatgatggctggacaacgtggcacgat-ggaggtttcagttttttgaggcaagacactggaaaaatcgtggtacgatgg 3886322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 372 - 428
Target Start/End: Original strand, 14807723 - 14807779
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || ||||||||| | ||||||||||||||||||||||||||||||    
T  14807723 gcagatttgttccaaattttaagcgatacttttactataaatatagaccttgtatca 14807779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 372 - 428
Target Start/End: Complemental strand, 28251930 - 28251874
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || ||||||||| | ||||||||||||||||||||||||||||||    
T  28251930 gcagatttgttccaaattttaagcgatacttttactataaatatagaccttgtatca 28251874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 277 - 346
Target Start/End: Original strand, 4423938 - 4424008
Alignment:
Q  277 atcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttggatgcagatttgttacaaattt 346  Q
    |||||||||||||||||||||||| |  ||||||| |||||||||||||  |||||||||||| |||||||    
T  4423938 atcgtggcacgatggtgcgctggcagcgaaaaatagaaacatatttttgagtgcagatttgttccaaattt 4424008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 372 - 428
Target Start/End: Complemental strand, 2468461 - 2468405
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || || |||||| | ||||||||||||||||||||||||||||||    
T  2468461 gcagatttgttccaaatgttaagcgatacttttactataaatatagaccttgtatca 2468405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 372 - 428
Target Start/End: Original strand, 4423990 - 4424046
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || ||||||||| | |||||||||||||||| |||||||||||||    
T  4423990 gcagatttgttccaaattttaagcgatacttttactataaatacagaccttgtatca 4424046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 372 - 428
Target Start/End: Original strand, 15067953 - 15068009
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || ||||||||| | |||||||||||||||||| |||||||||||    
T  15067953 gcagatttgttccaaattttaagcgatacttttactataaatataaaccttgtatca 15068009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 376 - 428
Target Start/End: Original strand, 15072686 - 15072738
Alignment:
Q  376 atttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||| || ||||||||| | ||||||||||||||||||||||||||||||    
T  15072686 atttgttccaaattttaagcgatacttttactataaatatagaccttgtatca 15072738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 372 - 428
Target Start/End: Original strand, 27826958 - 27827014
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || ||||||||| | ||||||||||||||||||| ||||||||||    
T  27826958 gcagatttgttccaaattttaagcgatacttttactataaatataggccttgtatca 27827014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 372 - 428
Target Start/End: Original strand, 27829269 - 27829325
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || ||||||||| | ||||||||||||||||||| ||||||||||    
T  27829269 gcagatttgttccaaattttaagcgatacttttactataaatataggccttgtatca 27829325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 376 - 428
Target Start/End: Complemental strand, 3886277 - 3886225
Alignment:
Q  376 atttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||| || ||||||||| | ||||||||||||||||||||| ||||||||    
T  3886277 atttgttccaaattttaagcgatacttttactataaatatagactttgtatca 3886225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 300
Target Start/End: Complemental strand, 28252002 - 28251958
Alignment:
Q  256 atcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggc 300  Q
    |||||||||||||||| ||||||||||| ||||||||||| ||||    
T  28252002 atcgtggcacgatgggatcgcatcgtggtacgatggtgcgttggc 28251958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 373 - 428
Target Start/End: Original strand, 17847501 - 17847556
Alignment:
Q  373 cagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    |||||||||| || ||||| ||  | ||||||||||||||||||||||||||||||    
T  17847501 cagatttgttccaaattttgagggatacttttactataaatatagaccttgtatca 17847556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 399 - 428
Target Start/End: Original strand, 6375988 - 6376017
Alignment:
Q  399 acttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||||||||||||||||||    
T  6375988 acttttactataaatatagaccttgtatca 6376017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 399 - 428
Target Start/End: Original strand, 15809214 - 15809243
Alignment:
Q  399 acttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||||||||||||||||||    
T  15809214 acttttactataaatatagaccttgtatca 15809243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 399 - 428
Target Start/End: Complemental strand, 24873523 - 24873494
Alignment:
Q  399 acttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||||||||||||||||||    
T  24873523 acttttactataaatatagaccttgtatca 24873494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 399 - 428
Target Start/End: Complemental strand, 28283561 - 28283532
Alignment:
Q  399 acttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||||||||||||||||||    
T  28283561 acttttactataaatatagaccttgtatca 28283532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 399 - 428
Target Start/End: Original strand, 31162212 - 31162241
Alignment:
Q  399 acttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||||||||||||||||||    
T  31162212 acttttactataaatatagaccttgtatca 31162241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 399 - 428
Target Start/End: Original strand, 32339304 - 32339333
Alignment:
Q  399 acttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||||||||||||||||||    
T  32339304 acttttactataaatatagaccttgtatca 32339333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 399 - 428
Target Start/End: Original strand, 43530123 - 43530152
Alignment:
Q  399 acttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||||||||||||||||||    
T  43530123 acttttactataaatatagaccttgtatca 43530152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 376 - 428
Target Start/End: Complemental strand, 12517385 - 12517333
Alignment:
Q  376 atttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||| || ||||||||| | |||||||||||| ||||| |||||||||||    
T  12517385 atttgttccaaattttaagcgatacttttactatatatatataccttgtatca 12517333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 247 - 323
Target Start/End: Complemental strand, 22685111 - 22685035
Alignment:
Q  247 actggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatattttt 323  Q
    ||||||||||| ||| |||||| |  ||| |||||| |||||||||||| | |  |||||||||||||| |||||||    
T  22685111 actggaaaaattgtgccacgatcgaatcgaatcgtgccacgatggtgcgattgaagataaaaataaaacgtattttt 22685035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 397 - 425
Target Start/End: Complemental strand, 31574082 - 31574054
Alignment:
Q  397 agacttttactataaatatagaccttgta 425  Q
    |||||||||||||||||||||||||||||    
T  31574082 agacttttactataaatatagaccttgta 31574054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 158; Significance: 6e-84; HSPs: 90)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 156 - 428
Target Start/End: Original strand, 50493680 - 50493951
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgagg-caaggtactggaaa 254  Q
    ||||||||||||||||||||||| ||||||||| |||||| ||| |||||||| ||||||||||| |||||||| ||||||  || ||||| ||||||||    
T  50493680 agagttaacttaaaatcaggttt-ctgcagaatcgtggcacgatagctgggcaacgtggcacgat-ggaggttttagttttttgggcaaggcactggaaa 50493777  T
Q  255 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatatttttggatgcagatttgttacaaatttaatgcaga 354  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||  |||  | || |    
T  50493778 aatcgtggcacgatggagtctcatcgtggcacgatggtgcgctggcggataaaaataaaacgtatttttgggagcagatttgttacagttttgttacaaa 50493877  T
Q  355 tttgttacaaatttaaagcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||| |||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  50493878 tttgttacagattttaagcagatttgttacagattttaagcaggactttcactataaatatagaccttgtatca 50493951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 156 - 375
Target Start/End: Complemental strand, 53896750 - 53896532
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgagg-caaggtactggaaa 254  Q
    ||||||||||||||||||||||| ||||||||| |||||| |||||||||||| ||||||||||| |||||||| ||||||  || ||||||||||||||    
T  53896750 agagttaacttaaaatcaggttt-ctgcagaatcgtggcacgattgctgggcaacgtggcacgat-ggaggttttagttttttgggcaaggtactggaaa 53896653  T
Q  255 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatatttttggatgcagatttgttacaaatttaatgcaga 354  Q
    |||||||||||||||||||| ||||||||||||||||||| || ||||||||||||||||| |||||||||  |||||||||||||| |||| | |||||    
T  53896652 aatcgtggcacgatggggtctcatcgtggcacgatggtgctcttgcggataaaaataaaacgtatttttgggagcagatttgttacagattttaagcaga 53896553  T
Q  355 tttgttacaaatttaaagcag 375  Q
    ||||||||| |||| ||||||    
T  53896552 tttgttacagattttaagcag 53896532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 156 - 346
Target Start/End: Original strand, 5191377 - 5191567
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgaggcaaggtactggaaaa 255  Q
    ||||||||||||||||||| ||| ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5191377 agagttaacttaaaatcagattt-ctgcagaatcgtggcacgattgctgggcatcgtggcacgattggaggtttcagttttgaggcaaggtactggaaaa 5191475  T
Q  256 atcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttggatgcagatttgttacaaattt 346  Q
    |||||||||||||||| || ||||||||||||||||||||||||| |  ||||| | |||||||||||||  |||||||||||| |||||||    
T  5191476 atcgtggcacgatgggatctcatcgtggcacgatggtgcgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattt 5191567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 156 - 346
Target Start/End: Complemental strand, 18099703 - 18099513
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgaggcaaggtactggaaaa 255  Q
    ||||||||||||||||||||||| ||||| ||| |||||| ||| |||||||| |||||||||||||||||||||||||||||||||||  |||||||||    
T  18099703 agagttaacttaaaatcaggttt-ctgcaaaatcgtggcacgatggctgggcaacgtggcacgattggaggtttcagttttgaggcaagacactggaaaa 18099605  T
Q  256 atcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttggatgcagatttgttacaaattt 346  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  || |||| |||| ||||||||| |||||||||||| |||||||    
T  18099604 atcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggcgaacaatagaaacgtatttttgggtgcagatttgttccaaattt 18099513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 156 - 374
Target Start/End: Original strand, 38210071 - 38210288
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgagg-caaggtactggaaa 254  Q
    ||||||||||||||||||||||| ||||||||| |||||| ||  |||||||| ||||||||||| |||||||| ||||||  || ||||| ||||||||    
T  38210071 agagttaacttaaaatcaggttt-ctgcagaatcgtggcacgacggctgggcaacgtggcacgat-ggaggttttagttttttgggcaaggcactggaaa 38210168  T
Q  255 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatatttttggatgcagatttgttacaaatttaatgcaga 354  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| |||||||||  ||||||||||||||  |||  | ||||    
T  38210169 aatcgtggcacgatggggtctcatcgtggcacgatagtgcgctggcggataaaaataaaacgtatttttgggagcagatttgttacagttttgttacaga 38210268  T
Q  355 tttgttacaaatttaaagca 374  Q
    ||||||||| |||| |||||    
T  38210269 tttgttacagattttaagca 38210288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 160 - 374
Target Start/End: Complemental strand, 6063998 - 6063785
Alignment:
Q  160 ttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgagg-caaggtactggaaaaatc 258  Q
    |||||||||||||||||||  |||||||| |||||| ||| ||  |||| |||||||| || |||||||| ||||||  || ||||| |||| |||||||    
T  6063998 ttaacttaaaatcaggttta-tgcagaatcgtggcacgatggcaaggcaacgtggcacaat-ggaggttttagttttttgggcaaggcactgaaaaaatc 6063901  T
Q  259 gtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatatttttggatgcagatttgttacaaatttaatgcagatttg 358  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||||| |||| | |||||||||    
T  6063900 gtggcacgatggggtcgcatcgtggcacgatggtggactggcggataaaaataaaacatatttttgggtgcagatttgttacagattttaagcagatttg 6063801  T
Q  359 ttacaaatttaaagca 374  Q
    ||||| |||| |||||    
T  6063800 ttacagattttaagca 6063785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 156 - 373
Target Start/End: Original strand, 5885987 - 5886204
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcat-cgtggcacgattggaggtttcagttttg-aggcaaggtactggaa 253  Q
    |||||||||||||||| ||||||| | |||||| |||||| |||||  | |||  ||||||||||| ||| |||| ||||||  ||||||||||||||||    
T  5885987 agagttaacttaaaattaggtttt-tacagaatcgtggcacgattgaagcgcaaacgtggcacgat-ggatgttttagttttttaggcaaggtactggaa 5886084  T
Q  254 aaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatatttttggatgcagatttgttacaaatttaatgcag 353  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||| |||| |||||||||| |||| | ||||    
T  5886085 aaatcgtggcacgatggggtcgcatcgtggtacgatggtgcgctggcagataaaaataaaacgtatttttgggtgcaaatttgttacagattttaagcag 5886184  T
Q  354 atttgttacaaatttaaagc 373  Q
    |||||||||| |||| ||||    
T  5886185 atttgttacagattttaagc 5886204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 208 - 374
Target Start/End: Original strand, 25388652 - 25388818
Alignment:
Q  208 atcgtggcacgattggaggtttcagttttgagg-caaggtactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataa 306  Q
    ||||||||||||| |||||||| ||||||  || ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  25388652 atcgtggcacgat-ggaggttttagttttttgggcaaggcactggaaaaatcgtggcacgatggggtctcatcgtggcacgatggtgcgctggcagataa 25388750  T
Q  307 aaataaaacatatttttggatgcagatttgttacaaatttaatgcagatttgttacaaatttaaagca 374  Q
    |||||||||||||||||||  |||||||||||||| |||| | |||||||||||||| |||| |||||    
T  25388751 aaataaaacatatttttgggagcagatttgttacagattttaagcagatttgttacagattttaagca 25388818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 185 - 346
Target Start/End: Complemental strand, 5523120 - 5522958
Alignment:
Q  185 gaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgaggcaaggtactggaaaaatcgtggcacgatggggtcgcatcgtggc 284  Q
    |||| |||||| |||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  5523120 gaatcgtggcaagattgctgggcaacatggcacgattggtggtttcagttttgaggcaaggtactggaaaaatcgtggcacaatgggatcgcatcgtggc 5523021  T
Q  285 acgatggtgcgctggcggataaaaata-aaacatatttttggatgcagatttgttacaaattt 346  Q
    |||||||||||||||| |  ||||| | |||||||||||||  |||||||||||| |||||||    
T  5523020 acgatggtgcgctggcagcgaaaaacagaaacatatttttgagtgcagatttgtttcaaattt 5522958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 164 - 373
Target Start/End: Original strand, 5899471 - 5899679
Alignment:
Q  164 cttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttg-aggcaaggtactggaaaaatcgtgg 262  Q
    |||| |||||||||| ||||| |||  ||||| |||||  ||||| ||||||||||| ||| |||| ||||||  |||||||| |||||||||||| |||    
T  5899471 cttataatcaggttt-ctgcataatcatggcacgattgaagggcaacgtggcacgat-ggatgttttagttttttaggcaaggcactggaaaaatcatgg 5899568  T
Q  263 cacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatatttttggatgcagatttgttacaaatttaatgcagatttgttac 362  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| | ||||||||||||| |||| | |||||||||||||    
T  5899569 cacgatggggtcgcatcgtggcacgatggtgcgctggcagataaaaataaaacgtatttttgggtacagatttgttacagattttaagcagatttgttac 5899668  T
Q  363 aaatttaaagc 373  Q
    | |||| ||||    
T  5899669 agattttaagc 5899679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 156 - 346
Target Start/End: Complemental strand, 22114838 - 22114648
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagtttt-gaggcaaggtactggaaa 254  Q
    ||||||||||||||||||||||| ||| ||||| |||||| ||| | |||||| ||||||||||| ||||||||||||||| ||||||||| ||||||||    
T  22114838 agagttaacttaaaatcaggttt-ctgtagaatcgtggcacgatggttgggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaa 22114741  T
Q  255 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttggatgcagatttgttacaaattt 346  Q
    ||| ||||||||||||||||||||||||||||||||||||| ||||||  || || | |||| ||||||||| |||||||||||| |||||||    
T  22114740 aattgtggcacgatggggtcgcatcgtggcacgatggtgcgatggcggcgaataacagaaacgtatttttgggtgcagatttgttccaaattt 22114648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 156 - 346
Target Start/End: Original strand, 1321165 - 1321355
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcag-aattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgaggcaaggtactggaaa 254  Q
    |||||||||||||||||| | |  |||||| ||| |||||| |||||||||||| |||||||||||| |||||||||  |||||||||| | |||| |||    
T  1321165 agagttaacttaaaatcaagat--ctgcaggaatcgtggcacgattgctgggcaacgtggcacgattagaggtttcaagtttgaggcaaagcactgaaaa 1321262  T
Q  255 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttggatgcagatttgttacaaattt 346  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| |  ||||| | |||||||||||||  |||||||||||| |||||||    
T  1321263 aatcgtggcacgatggggtcgcatcgtggcacgatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattt 1321355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 156 - 346
Target Start/End: Complemental strand, 10956559 - 10956370
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcag-aattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgaggcaaggtactggaaa 254  Q
    |||||||||||||||||||| |  |||||| ||| ||||||  || ||||| |||| |||||||||||||||||||||||||| ||||||| ||||||||    
T  10956559 agagttaacttaaaatcaggat--ctgcaggaatcgtggcac-atggctggacatcatggcacgattggaggtttcagttttggggcaaggcactggaaa 10956463  T
Q  255 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttggatgcagatttgttacaaattt 346  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |  || || | |||| ||||||| | |||||||||||| |||||||    
T  10956462 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcagcgaataacataaacgtatttttaggtgcagatttgttccaaattt 10956370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 68 - 155
Target Start/End: Original strand, 49202869 - 49202956
Alignment:
Q  68 aaacatatgaaattattaatcttgtacctagctagtataaaagaattgcataacaataaataatgaagaaattacatatatttgcata 155  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49202869 aaacatatgaaattattaatcttgtacctagctagtataaaagaattgcataacaataaataatgaagaaattacatatatttgcata 49202956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 156 - 284
Target Start/End: Complemental strand, 18097418 - 18097291
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgaggcaaggtactggaaaa 255  Q
    ||||||||||||||||||||||| ||||| ||| |||||| ||| |||||||| |||||||||||||||||||||||||||||||||||| |  ||||||    
T  18097418 agagttaacttaaaatcaggttt-ctgcaaaatcgtggcacgatggctgggcaacgtggcacgattggaggtttcagttttgaggcaaggcataggaaaa 18097320  T
Q  256 atcgtggcacgatggggtcgcatcgtggc 284  Q
    ||||||||||||||||||||||| |||||    
T  18097319 atcgtggcacgatggggtcgcatagtggc 18097291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 156 - 346
Target Start/End: Original strand, 26720272 - 26720462
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcag-aattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgaggcaaggtactggaaa 254  Q
    |||||||||||||||||||| |  |||||| ||| |||||| ||| |||| ||| ||||||| ||||||||||||||  |||||||||| | ||||||||    
T  26720272 agagttaacttaaaatcaggat--ctgcaggaatcgtggcacgatggctgagcaacgtggcaggattggaggtttcaagtttgaggcaaagcactggaaa 26720369  T
Q  255 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttggatgcagatttgttacaaattt 346  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||| |  ||||| | ||||||||||||   |||||||||||| |||||||    
T  26720370 aatcgtggcacgatgggatcgcatcgtggcacgatggtgtgctggcagcgaaaaacagaaacatattttttagtgcagatttgttccaaattt 26720462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 349 - 428
Target Start/End: Complemental strand, 6063832 - 6063753
Alignment:
Q  349 tgcagatttgttacaaatttaaagcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6063832 tgcagatttgttacagattttaagcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 6063753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 350 - 428
Target Start/End: Original strand, 25388772 - 25388850
Alignment:
Q  350 gcagatttgttacaaatttaaagcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25388772 gcagatttgttacagattttaagcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 25388850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 156 - 346
Target Start/End: Complemental strand, 32264576 - 32264386
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaatt-gtggcatgattgctgggcatcgtggcacgattggaggtttcagtttt-gaggcaaggtactggaa 253  Q
    ||||||||||||||||||||||||  |||||| | |||||| ||| |||||| | ||||||||||||||||||||||||||| ||||||||  ||||||     
T  32264576 agagttaacttaaaatcaggtttt--gcagaaatcgtggcacgatggctgggaa-cgtggcacgattggaggtttcagtttttgaggcaagtcactggat 32264480  T
Q  254 aaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttggatgcagatttgttacaaattt 346  Q
       ||||||||||||||| | ||| |||||||||||||||||||||| |  || || | |||||||||||||| |||||||||||| |||||||    
T  32264479 ttttcgtggcacgatgggcttgcaacgtggcacgatggtgcgctggcagcgaataacagaaacatatttttgggtgcagatttgtttcaaattt 32264386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 349 - 428
Target Start/End: Complemental strand, 6719495 - 6719416
Alignment:
Q  349 tgcagatttgttacaaatttaaagcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    |||||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6719495 tgcagatttgatacagattttaagcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 6719416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 154 - 282
Target Start/End: Complemental strand, 10085607 - 10085481
Alignment:
Q  154 taagagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgaggcaaggtactggaa 253  Q
    |||||||||||| |||||||| |||  ||| |||| |||||||||| ||  |||| ||||||||||| |||||||||||||||||||||||| |||||||    
T  10085607 taagagttaactgaaaatcagattta-tgcggaatcgtggcatgatcgcaaggcaacgtggcacgat-ggaggtttcagttttgaggcaaggcactggaa 10085510  T
Q  254 aaatcgtggcacgatggggtcgcatcgtg 282  Q
    |||||||||||||||||| || |||||||    
T  10085509 aaatcgtggcacgatgggatcacatcgtg 10085481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 154 - 282
Target Start/End: Complemental strand, 10192527 - 10192401
Alignment:
Q  154 taagagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgaggcaaggtactggaa 253  Q
    |||||||||||| |||||||| |||  ||| |||| |||||| ||| ||  |||| ||||||||||| |||||||||||||||||||||||| |||||||    
T  10192527 taagagttaactgaaaatcagattta-tgcggaatcgtggcacgatcgcaaggcaacgtggcacgat-ggaggtttcagttttgaggcaaggcactggaa 10192430  T
Q  254 aaatcgtggcacgatggggtcgcatcgtg 282  Q
    |||||||||||||||||| ||||||||||    
T  10192429 aaatcgtggcacgatgggatcgcatcgtg 10192401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 350 - 428
Target Start/End: Complemental strand, 53896579 - 53896501
Alignment:
Q  350 gcagatttgttacaaatttaaagcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  53896579 gcagatttgttacagattttaagcagatttgttacagattttaagcaggactttcactataaatatagaccttgtatca 53896501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 351 - 428
Target Start/End: Original strand, 5899635 - 5899712
Alignment:
Q  351 cagatttgttacaaatttaaagcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  5899635 cagatttgttacagattttaagcagatttgttacagattttaagcgagacttttactataaatatagaccttttatca 5899712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 160 - 270
Target Start/End: Complemental strand, 6719643 - 6719532
Alignment:
Q  160 ttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggag--gtttcagttttgaggcaaggtactggaaaaat 257  Q
    ||||||||||||||||||| ||||  ||| |||||| |||||  ||||||||||||||||||||||  ||||||||||| |||||| | |||||||||||    
T  6719643 ttaacttaaaatcaggttt-ctgcttaatcgtggcacgattgaagggcatcgtggcacgattggagaggtttcagtttttaggcaatgcactggaaaaat 6719545  T
Q  258 cgtggcacgatgg 270  Q
    |||||||||||||    
T  6719544 cgtggcacgatgg 6719532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 255 - 346
Target Start/End: Original strand, 3859350 - 3859442
Alignment:
Q  255 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttggatgcagatttgttacaaattt 346  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||  || |||| |||| ||||||||| |||||||||||| |||||||    
T  3859350 aatcgtggcacgatggggtcacatcgtggcacgatggtgcgctggcggcgaataatataaacgtatttttgggtgcagatttgtttcaaattt 3859442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 247 - 346
Target Start/End: Complemental strand, 10958766 - 10958666
Alignment:
Q  247 actggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttggatgcagatttgttacaaatt 345  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |  || || | |||| ||||||| | |||||||||||| ||||||    
T  10958766 actggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcagccaataacagaaacgtatttttaggtgcagatttgttccaaatt 10958667  T
Q  346 t 346  Q
    |    
T  10958666 t 10958666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 349 - 428
Target Start/End: Original strand, 5886158 - 5886237
Alignment:
Q  349 tgcagatttgttacaaatttaaagcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    |||| |||||||||| |||| |||||||||||||||||||||||||| | |||||||||||||||||||||||| |||||    
T  5886158 tgcaaatttgttacagattttaagcagatttgttacagattttaagcgaaacttttactataaatatagaccttttatca 5886237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 156 - 270
Target Start/End: Original strand, 38889761 - 38889875
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcag-ttttgaggcaaggtactggaaa 254  Q
    |||||||||||||||| |||||||||||||||| |||| | ||| ||  |||| |||||||||| |||||||||||| |||| |||||||| | ||||||    
T  38889761 agagttaacttaaaattaggttttctgcagaatcgtggtacgatggcaaggcaacgtggcacga-tggaggtttcagttttttaggcaaggcattggaaa 38889859  T
Q  255 aatcgtggcacgatgg 270  Q
    ||||||||||||||||    
T  38889860 aatcgtggcacgatgg 38889875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 156 - 270
Target Start/End: Original strand, 11162895 - 11163008
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcag-aattgtggcatgattgctgggcatcgtggcacgattggaggtttcagtttt-gaggcaaggtactggaa 253  Q
    |||||||||||||||||| | |  |||||| ||| |||||| |||||||||||| ||||||||||| ||||||||||||||| ||||||||| |||||||    
T  11162895 agagttaacttaaaatcaagat--ctgcaggaatcgtggcacgattgctgggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaa 11162991  T
Q  254 aaatcgtggcacgatgg 270  Q
    |||| ||||||||||||    
T  11162992 aaattgtggcacgatgg 11163008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 156 - 346
Target Start/End: Original strand, 24177003 - 24177193
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaatt-gtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgaggcaaggtactggaaa 254  Q
    |||||||||||||||||| |||  ||| |||| | |||||| | |||| ||||| ||||||||||||||  ||||||||| ||| |||||  ||||||||    
T  24177003 agagttaacttaaaatcaagtt--ctggagaaatcgtggcacgtttgcagggcaacgtggcacgattggttgtttcagttctgaagcaagtcactggaaa 24177100  T
Q  255 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttggatgcagatttgttacaaattt 346  Q
    ||  ||||||||||||| |||||  |||||||||||||||| ||| ||  ||||| | |||| |||||||   |||||||||||| |||||||    
T  24177101 aaatgtggcacgatgggatcgcaatgtggcacgatggtgcgttggaggcgaaaaacataaacgtatttttaagtgcagatttgttccaaattt 24177193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 349 - 426
Target Start/End: Original strand, 38889912 - 38889989
Alignment:
Q  349 tgcagatttgttacaaatttaaagcagatttgttacagattttaagcaagacttttactataaatatagaccttgtat 426  Q
    ||||||||||||||| |||| ||||||||||||| || ||||||||| | ||||||||||||||||||||||||||||    
T  38889912 tgcagatttgttacagattttaagcagatttgttccaaattttaagcgaaacttttactataaatatagaccttgtat 38889989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 372 - 428
Target Start/End: Original strand, 35777317 - 35777373
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  35777317 gcagatttgttacagattttaagcaagacttttactataaatatagacattgtatca 35777373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 373 - 428
Target Start/End: Original strand, 38210265 - 38210320
Alignment:
Q  373 cagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  38210265 cagatttgttacagattttaagcaagacttttactataaatataggccttgtatca 38210320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 276 - 346
Target Start/End: Complemental strand, 6066210 - 6066140
Alignment:
Q  276 catcgtggcacgatggtgcgctggcggataaaaataaaacatatttttggatgcagatttgttacaaattt 346  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||  |||||||||||||| ||||    
T  6066210 catcgtggcacgatggtgcgctggcggataaaaataaaatgtatttttgggagcagatttgttacagattt 6066140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 371 - 428
Target Start/End: Complemental strand, 6066159 - 6066102
Alignment:
Q  371 agcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  6066159 agcagatttgttacagattttaagcagaacttttactataaatatagaccttgtatca 6066102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 277 - 373
Target Start/End: Original strand, 38889861 - 38889958
Alignment:
Q  277 atcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttggatgcagatttgttacaaatttaatgcagatttgttacaaatttaaagc 373  Q
    ||||||||||||||||||||||||||  || || | |||||||||||||| ||||||||||||||| |||| | ||||||||||| ||||||| ||||    
T  38889861 atcgtggcacgatggtgcgctggcggcgaataacagaaacatatttttgggtgcagatttgttacagattttaagcagatttgttccaaattttaagc 38889958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 156 - 270
Target Start/End: Original strand, 35777167 - 35777280
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgagg-caaggtactggaaa 254  Q
    |||||||||||||||| || ||| ||||||||| |||||| ||  |||||||| ||||||||||| |||||||| ||||||  || ||||| ||||||||    
T  35777167 agagttaacttaaaattagattt-ctgcagaatcgtggcacgacagctgggcaacgtggcacgat-ggaggttttagttttttgggcaaggcactggaaa 35777264  T
Q  255 aatcgtggcacgatgg 270  Q
    ||||||||||||||||    
T  35777265 aatcgtggcacgatgg 35777280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 277 - 374
Target Start/End: Complemental strand, 6719546 - 6719448
Alignment:
Q  277 atcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttggatgcagatttgttacaaatttaatgcagatttgttacaaatttaaagca 374  Q
    ||||||||||||||||||||||||||  || || | |||||||||||||| |||||||||| |||| |||| | |||||||||||||| |||| |||||    
T  6719546 atcgtggcacgatggtgcgctggcggcgaataacagaaacatatttttgggtgcagatttgatacagattttaagcagatttgttacagattttaagca 6719448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 156 - 236
Target Start/End: Complemental strand, 7606959 - 7606881
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagtttt 236  Q
    ||||||||||||||||||||||| ||||||||| ||| || ||| |||||||| |||||||||| ||||||||||||||||    
T  7606959 agagttaacttaaaatcaggttt-ctgcagaatcgtgacacgatggctgggcaacgtggcacga-tggaggtttcagtttt 7606881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 372 - 428
Target Start/End: Complemental strand, 18097262 - 18097206
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || ||||||||| ||||||||||||||||||||||||||||||||    
T  18097262 gcagatttgtttcaaattttaagcgagacttttactataaatatagaccttgtatca 18097206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 372 - 428
Target Start/End: Original strand, 26720444 - 26720500
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||    
T  26720444 gcagatttgttccaaattttaagcaatacttttactataaatatagaccttgtatca 26720500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 156 - 268
Target Start/End: Original strand, 11170149 - 11170260
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcag-aattgtggcatgattgctgggcatcgtggcacgattggaggtttcagtttt-gaggcaaggtactggaa 253  Q
    |||||||||||||||||| | |  |||||| ||| |||||| | |||||||||| ||||||||||| ||||||||| ||||| ||||||||| |||||||    
T  11170149 agagttaacttaaaatcaagat--ctgcaggaatcgtggcacggttgctgggcaacgtggcacgat-ggaggtttcggtttttgaggcaaggcactggaa 11170245  T
Q  254 aaatcgtggcacgat 268  Q
    |||||||||| ||||    
T  11170246 aaatcgtggctcgat 11170260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 156 - 244
Target Start/End: Complemental strand, 48362182 - 48362095
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaatt-gtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgaggcaag 244  Q
    ||||||||||||||||||||||  ||| |||| | |||||| ||| | |||||| ||||||||||||||| |||||||||||||||||||    
T  48362182 agagttaacttaaaatcaggtt--ctgtagaaatcgtggcacgatggttgggcaacgtggcacgattggaagtttcagttttgaggcaag 48362095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 372 - 428
Target Start/End: Original strand, 3859424 - 3859480
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || ||||||||| | ||||||||||||||||||||||||||||||    
T  3859424 gcagatttgtttcaaattttaagcgaaacttttactataaatatagaccttgtatca 3859480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 372 - 428
Target Start/End: Complemental strand, 5522976 - 5522920
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || ||||||||| | ||||||||||||||||||||||||||||||    
T  5522976 gcagatttgtttcaaattttaagcgaaacttttactataaatatagaccttgtatca 5522920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 372 - 428
Target Start/End: Original strand, 11170300 - 11170356
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || ||||||||| | ||||||||||||||||||||||||||||||    
T  11170300 gcagatttgttccaaattttaagcgaaacttttactataaatatagaccttgtatca 11170356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 372 - 428
Target Start/End: Original strand, 15780756 - 15780812
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || ||||||||| | ||||||||||||||||||||||||||||||    
T  15780756 gcagatttgttccaaattttaagcgatacttttactataaatatagaccttgtatca 15780812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 372 - 428
Target Start/End: Original strand, 18162560 - 18162616
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || ||||||||| | ||||||||||||||||||||||||||||||    
T  18162560 gcagatttgttccaaattttaagcgatacttttactataaatatagaccttgtatca 18162616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 372 - 428
Target Start/End: Complemental strand, 22114666 - 22114610
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || ||||||||| | ||||||||||||||||||||||||||||||    
T  22114666 gcagatttgttccaaattttaagcgaaacttttactataaatatagaccttgtatca 22114610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 372 - 428
Target Start/End: Complemental strand, 32264404 - 32264348
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || ||||||||| | ||||||||||||||||||||||||||||||    
T  32264404 gcagatttgtttcaaattttaagcgatacttttactataaatatagaccttgtatca 32264348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 372 - 428
Target Start/End: Complemental strand, 48362031 - 48361975
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || ||||||||| | ||||||||||||||||||||||||||||||    
T  48362031 gcagatttgttccaaattttaagcgatacttttactataaatatagaccttgtatca 48361975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 156 - 244
Target Start/End: Original strand, 32218840 - 32218927
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaatt-gtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgaggcaag 244  Q
    ||||||||||||||||||||||  |||||||| | |||||| |||   |||||| ||||||||||||||||||||||  |||||||||||    
T  32218840 agagttaacttaaaatcaggtt--ctgcagaaatcgtggcacgatgattgggcaacgtggcacgattggaggtttcaactttgaggcaag 32218927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 277 - 346
Target Start/End: Original strand, 35777266 - 35777335
Alignment:
Q  277 atcgtggcacgatggtgcgctggcggataaaaataaaacatatttttggatgcagatttgttacaaattt 346  Q
    |||||||||||||||||||||||| |  ||||   |||||||||||||| ||||||||||||||| ||||    
T  35777266 atcgtggcacgatggtgcgctggcagcaaaaacataaacatatttttgggtgcagatttgttacagattt 35777335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 372 - 428
Target Start/End: Original strand, 1321337 - 1321393
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || ||||||||| | ||||||||||||||||||||| ||||||||    
T  1321337 gcagatttgttccaaattttaagcgatacttttactataaatatagactttgtatca 1321393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 247 - 323
Target Start/End: Complemental strand, 4308724 - 4308648
Alignment:
Q  247 actggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatattttt 323  Q
    ||||||||||||||| |||||| || ||| |||||| |||||||||||| | |  |||||||||||||| |||||||    
T  4308724 actggaaaaatcgtgccacgattggatcgaatcgtgccacgatggtgcgattgaagataaaaataaaacgtattttt 4308648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 372 - 428
Target Start/End: Complemental strand, 10956388 - 10956332
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || |||||||||||   ||||||||||||||||||||||||||||    
T  10956388 gcagatttgttccaaattttaagcaatttttttactataaatatagaccttgtatca 10956332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 372 - 428
Target Start/End: Complemental strand, 10958684 - 10958628
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || |||||||||||   ||||||||||||||||||||||||||||    
T  10958684 gcagatttgttccaaattttaagcaatttttttactataaatatagaccttgtatca 10958628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 372 - 428
Target Start/End: Original strand, 11163046 - 11163102
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || ||||||||| | |||||||| |||||||||||||||||||||    
T  11163046 gcagatttgttccaaattttaagcgaaacttttacgataaatatagaccttgtatca 11163102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 372 - 428
Target Start/End: Complemental strand, 18099531 - 18099476
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || ||||||||| ||||||||||||| ||||||||||||||||||    
T  18099531 gcagatttgttccaaattttaagcgagacttttactat-aatatagaccttgtatca 18099476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 372 - 428
Target Start/End: Original strand, 45882835 - 45882891
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    |||||||||||  | ||||||||| | ||||||||||||||||||||||||||||||    
T  45882835 gcagatttgttgaaaattttaagcgatacttttactataaatatagaccttgtatca 45882891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 372 - 427
Target Start/End: Original strand, 5191549 - 5191604
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatc 427  Q
    ||||||||||| || ||||||||  | |||||||||||||||||||||||||||||    
T  5191549 gcagatttgttccaaattttaagggaaacttttactataaatatagaccttgtatc 5191604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 252 - 323
Target Start/End: Complemental strand, 9605050 - 9604979
Alignment:
Q  252 aaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatattttt 323  Q
    |||||||||| |||||  |  ||||||||||||||||||||||| | |  ||||||||||||||||||||||    
T  9605050 aaaaatcgtgccacgactgaatcgcatcgtggcacgatggtgcgattgaagataaaaataaaacatattttt 9604979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 372 - 427
Target Start/End: Complemental strand, 10084754 - 10084699
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatc 427  Q
    ||||||||||| || ||||||||| |  ||||||||||||||||||||||||||||    
T  10084754 gcagatttgttccaaattttaagcgatgcttttactataaatatagaccttgtatc 10084699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 276 - 346
Target Start/End: Complemental strand, 10084807 - 10084736
Alignment:
Q  276 catcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttggatgcagatttgttacaaattt 346  Q
    ||||||||||||||||||||||||| |  ||||| | |||||||||||||  |||||||||||| |||||||    
T  10084807 catcgtggcacgatggtgcgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattt 10084736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 376 - 427
Target Start/End: Complemental strand, 10191670 - 10191619
Alignment:
Q  376 atttgttacagattttaagcaagacttttactataaatatagaccttgtatc 427  Q
    ||||||| || ||||||||| | |||||||||||||||||||||||||||||    
T  10191670 atttgttccaaattttaagcgatacttttactataaatatagaccttgtatc 10191619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 247 - 298
Target Start/End: Original strand, 45882753 - 45882804
Alignment:
Q  247 actggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctg 298  Q
    ||||||||||||||| ||||||||| | ||| ||||||||||||||||||||    
T  45882753 actggaaaaatcgtgccacgatgggattgcaacgtggcacgatggtgcgctg 45882804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 250 - 323
Target Start/End: Original strand, 43228108 - 43228181
Alignment:
Q  250 ggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatattttt 323  Q
    |||||||||||| |||||| || ||| |||||| |||||||||||| | |  |||||||||||||| |||||||    
T  43228108 ggaaaaatcgtgccacgattggatcgaatcgtgccacgatggtgcgattgaagataaaaataaaacgtattttt 43228181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 376 - 428
Target Start/End: Complemental strand, 12268323 - 12268271
Alignment:
Q  376 atttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||| || ||||||||| | |||||||||||||||||||| |||||||||    
T  12268323 atttgttccaaattttaagcgatacttttactataaatatagaacttgtatca 12268271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 372 - 428
Target Start/End: Original strand, 24177175 - 24177231
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || ||||||||  | ||||||| ||||||||||||||||||||||    
T  24177175 gcagatttgttccaaattttaagggatacttttattataaatatagaccttgtatca 24177231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 372 - 428
Target Start/End: Original strand, 24979603 - 24979659
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || |||||||| || ||||| |||||||||||| |||||||||||    
T  24979603 gcagatttgttccaaattttaagtaatactttcactataaatatataccttgtatca 24979659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 323
Target Start/End: Complemental strand, 27101703 - 27101627
Alignment:
Q  247 actggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatattttt 323  Q
    ||||||||||||||| |||||| || ||| |||||| || ||||||||| | |  |||||||||||||| |||||||    
T  27101703 actggaaaaatcgtgccacgattggatcgaatcgtgccaagatggtgcgattgaagataaaaataaaacgtattttt 27101627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 323
Target Start/End: Complemental strand, 35918392 - 35918316
Alignment:
Q  247 actggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatattttt 323  Q
    |||||||||||||| ||||||| || ||| || ||| |||||||||||| | |  |||||||||||||| |||||||    
T  35918392 actggaaaaatcgtagcacgattggatcgaatagtgccacgatggtgcgattgaagataaaaataaaacgtattttt 35918316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 195
Target Start/End: Complemental strand, 6066287 - 6066249
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggca 195  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  6066287 agagttaacttaaaatcagg-tttctgcagaattgtggca 6066249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 276 - 346
Target Start/End: Complemental strand, 10191727 - 10191656
Alignment:
Q  276 catcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttggatgcagatttgttacaaattt 346  Q
    ||||||||||||||||||||||||| |  ||||| | |||||||||||||  |||| ||||||| |||||||    
T  10191727 catcgtggcacgatggtgcgctggcagcgaaaaacagaaacatatttttgagtgcaaatttgttccaaattt 10191656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 280 - 346
Target Start/End: Original strand, 11162997 - 11163064
Alignment:
Q  280 gtggcacgatggtgcgctggcggataaaaata-aaacatatttttggatgcagatttgttacaaattt 346  Q
    |||||||||||||||||||||||  || || | |||| ||||||||| |||||||||||| |||||||    
T  11162997 gtggcacgatggtgcgctggcggcgaataacagaaacgtatttttgggtgcagatttgttccaaattt 11163064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 372 - 427
Target Start/End: Original strand, 32218991 - 32219046
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatc 427  Q
    ||||||||||| || |||||||| || ||||| | |||||||||||||||||||||    
T  32218991 gcagatttgttccaaattttaagtaatactttcagtataaatatagaccttgtatc 32219046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 277 - 346
Target Start/End: Original strand, 11170248 - 11170318
Alignment:
Q  277 atcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttggatgcagatttgttacaaattt 346  Q
    |||||||| |||| ||||||||||||  || || | |||||||||||||| |||||||||||| |||||||    
T  11170248 atcgtggctcgattgtgcgctggcggcgaataacagaaacatatttttgggtgcagatttgttccaaattt 11170318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 399 - 428
Target Start/End: Original strand, 455826 - 455855
Alignment:
Q  399 acttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||||||||||||||||||    
T  455826 acttttactataaatatagaccttgtatca 455855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 399 - 428
Target Start/End: Original strand, 458203 - 458232
Alignment:
Q  399 acttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||||||||||||||||||    
T  458203 acttttactataaatatagaccttgtatca 458232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 399 - 428
Target Start/End: Original strand, 746674 - 746703
Alignment:
Q  399 acttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||||||||||||||||||    
T  746674 acttttactataaatatagaccttgtatca 746703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 399 - 428
Target Start/End: Complemental strand, 4104233 - 4104204
Alignment:
Q  399 acttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||||||||||||||||||    
T  4104233 acttttactataaatatagaccttgtatca 4104204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 399 - 428
Target Start/End: Complemental strand, 10621876 - 10621847
Alignment:
Q  399 acttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||||||||||||||||||    
T  10621876 acttttactataaatatagaccttgtatca 10621847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 399 - 428
Target Start/End: Original strand, 25533357 - 25533386
Alignment:
Q  399 acttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||||||||||||||||||    
T  25533357 acttttactataaatatagaccttgtatca 25533386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 399 - 428
Target Start/End: Original strand, 42990205 - 42990234
Alignment:
Q  399 acttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||||||||||||||||||    
T  42990205 acttttactataaatatagaccttgtatca 42990234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 399 - 428
Target Start/End: Original strand, 53597164 - 53597193
Alignment:
Q  399 acttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||||||||||||||||||    
T  53597164 acttttactataaatatagaccttgtatca 53597193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 372 - 428
Target Start/End: Original strand, 13893289 - 13893345
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || ||||||||    ||||||||||||||||||||| ||||||||    
T  13893289 gcagatttgttccaaattttaagggttacttttactataaatatagacattgtatca 13893345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 247 - 323
Target Start/End: Complemental strand, 25690799 - 25690723
Alignment:
Q  247 actggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatattttt 323  Q
    ||||||||||||||| || ||| || ||| || ||| |||||||||||| | |  |||||||||||||| |||||||    
T  25690799 actggaaaaatcgtgccatgattggatcgaattgtgccacgatggtgcgattgaagataaaaataaaacgtattttt 25690723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 400 - 428
Target Start/End: Complemental strand, 47149233 - 47149205
Alignment:
Q  400 cttttactataaatatagaccttgtatca 428  Q
    |||||||||||||||||||||||||||||    
T  47149233 cttttactataaatatagaccttgtatca 47149205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 247 - 323
Target Start/End: Complemental strand, 51727449 - 51727373
Alignment:
Q  247 actggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatattttt 323  Q
    ||||||||||||||| ||||||  | ||| |||||| |||||||||| | | |  |||||||||||||| |||||||    
T  51727449 actggaaaaatcgtgccacgatttgatcgaatcgtgccacgatggtgtgattgaagataaaaataaaacgtattttt 51727373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 155; Significance: 4e-82; HSPs: 2)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 156 - 428
Target Start/End: Original strand, 21919 - 22191
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgagg-caaggtactggaaa 254  Q
    ||||||||||||||||||||||| ||||| ||| |||||| ||  ||||||| ||| |||||||| |||||||| ||||||  || ||||| ||||||||    
T  21919 agagttaacttaaaatcaggttt-ctgcacaatcgtggcacgacagctgggcttcgcggcacgat-ggaggttttagttttttgggcaaggcactggaaa 22016  T
Q  255 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatatttttggatgcagatttgttaca-aatttaatgcag 353  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||   |||  | |||    
T  22017 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatatttttgggagcagatttgttacagtttttgttacag 22116  T
Q  354 atttgttacaaatttaaagcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||| | |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  22117 atttgttacaaattttaggcagatttgttatagattttaagcaggacttttactataaatatagaccttgtatca 22191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140; HSP #2
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 156 - 428
Target Start/End: Original strand, 24194 - 24466
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgagg-caaggtactggaaa 254  Q
    ||||||||||||||||||||||| ||||| ||| |||||| ||  ||||||| ||| |||||||| |||||||| ||||||  || ||||| ||||||||    
T  24194 agagttaacttaaaatcaggttt-ctgcacaatcgtggcacgacagctgggcttcgcggcacgat-ggaggttttagttttttgggcaaggcactggaaa 24291  T
Q  255 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatatttttggatgcagatttgttaca-aatttaatgcag 353  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||   |||  | |||    
T  24292 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatatttttgggagcagatttgttacagtttttgttacag 24391  T
Q  354 atttgttacaaatttaaagcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||| | |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  24392 atttgttacaaattttaggcagatttgttatagattttaagcaggacttttactataaatatagaccttgtatca 24466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 155; Significance: 4e-82; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 156 - 428
Target Start/End: Complemental strand, 9027683 - 9027411
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgagg-caaggtactggaaa 254  Q
    ||||||||||||||||||||||| ||||| ||| |||||| ||  ||||||| ||| |||||||| |||||||| ||||||  || ||||| ||||||||    
T  9027683 agagttaacttaaaatcaggttt-ctgcacaatcgtggcacgacggctgggcttcgcggcacgat-ggaggttttagttttttgggcaaggcactggaaa 9027586  T
Q  255 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatatttttggatgcagatttgttaca-aatttaatgcag 353  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||   |||  | |||    
T  9027585 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatatttttgggagcagatttgttacagtttttgttacag 9027486  T
Q  354 atttgttacaaatttaaagcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||| | |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  9027485 atttgttacaaattttaggcagatttgttatagattttaagcaggacttttactataaatatagaccttgtatca 9027411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 156 - 428
Target Start/End: Original strand, 22136882 - 22137154
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgagg-caaggtactggaaa 254  Q
    ||||||||||||||||||||||| ||||| ||| |||||| ||  ||||||| ||| |||||||| |||||||| ||||||  || ||||| ||||||||    
T  22136882 agagttaacttaaaatcaggttt-ctgcacaatcgtggcacgacagctgggcttcgcggcacgat-ggaggttttagttttttgggcaaggcactggaaa 22136979  T
Q  255 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatatttttggatgcagatttgttaca-aatttaatgcag 353  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||   |||  | |||    
T  22136980 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatatttttgggagcagatttgttacagtttttgttacag 22137079  T
Q  354 atttgttacaaatttaaagcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||| | |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  22137080 atttgttacaaattttaggcagatttgttatagattttaagcaggacttttactataaatatagaccttgtatca 22137154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 156 - 428
Target Start/End: Original strand, 40551909 - 40552181
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgagg-caaggtactggaaa 254  Q
    ||||||||||||||||||||||| ||||| ||| |||||| ||  ||||||| ||| |||||||| |||||||| ||||||  || ||||| ||||||||    
T  40551909 agagttaacttaaaatcaggttt-ctgcacaatcgtggcacgacagctgggcttcgcggcacgat-ggaggttttagttttttgggcaaggcactggaaa 40552006  T
Q  255 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatatttttggatgcagatttgttaca-aatttaatgcag 353  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||   |||  | |||    
T  40552007 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatatttttgggagcagatttgttacagtttttgttacag 40552106  T
Q  354 atttgttacaaatttaaagcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||| | |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  40552107 atttgttacaaattttaggcagatttgttatagattttaagcaggacttttactataaatatagaccttgtatca 40552181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 151; E-Value: 9e-80
Query Start/End: Original strand, 156 - 428
Target Start/End: Original strand, 22107871 - 22108143
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgagg-caaggtactggaaa 254  Q
    ||||||||||||||||||||||| ||||| ||| |||||| ||  ||||||| ||| |||||||| | |||||| ||||||  || ||||| ||||||||    
T  22107871 agagttaacttaaaatcaggttt-ctgcacaatcgtggcacgacagctgggcttcgcggcacgat-gcaggttttagttttttgggcaaggcactggaaa 22107968  T
Q  255 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatatttttggatgcagatttgttaca-aatttaatgcag 353  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||   |||  | |||    
T  22107969 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatatttttgggagcagatttgttacagtttttgttacag 22108068  T
Q  354 atttgttacaaatttaaagcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||| | |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  22108069 atttgttacaaattttaggcagatttgttatagattttaagcaggacttttactataaatatagaccttgtatca 22108143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 151; E-Value: 9e-80
Query Start/End: Original strand, 156 - 428
Target Start/End: Original strand, 40549631 - 40549903
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgagg-caaggtactggaaa 254  Q
    ||||||||||||||||||||||| ||||| ||| |||||| ||  ||||||| ||| |||||||| | |||||| ||||||  || ||||| ||||||||    
T  40549631 agagttaacttaaaatcaggttt-ctgcacaatcgtggcacgacagctgggcttcgcggcacgat-gcaggttttagttttttgggcaaggcactggaaa 40549728  T
Q  255 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatatttttggatgcagatttgttaca-aatttaatgcag 353  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||   |||  | |||    
T  40549729 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatatttttgggagcagatttgttacagtttttgttacag 40549828  T
Q  354 atttgttacaaatttaaagcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||| | |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  40549829 atttgttacaaattttaggcagatttgttatagattttaagcaggacttttactataaatatagaccttgtatca 40549903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 156 - 428
Target Start/End: Complemental strand, 1047499 - 1047239
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgagg-caaggtactggaaa 254  Q
    ||||||||||||||||||||||| ||||||||| |||||| ||  |||||||| ||||||||||| |||||||| ||||||  || ||||| ||||||||    
T  1047499 agagttaacttaaaatcaggttt-ctgcagaatcgtggcacgacggctgggcaacgtggcacgat-ggaggttttagttttttgggcaaggcactggaaa 1047402  T
Q  255 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatatttttggatgcagatttgttacaaatttaatgcaga 354  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||||||           |||     
T  1047401 aatcgtggcacgatggggtctcatcgtggcacgatggtgcgctggcggataaaaataaaacgtatttttgggagcagatttgtta-----------cagt 1047313  T
Q  355 tttgttacaaatttaaagcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  1047312 tttgttacagattttaagcagatttgttacagattttaagcaggacttttactataaatataaaccttgtatca 1047239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 156 - 428
Target Start/End: Original strand, 2935074 - 2935335
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgagg-caaggtactggaaa 254  Q
    ||||||||||||||||||||||| ||||| ||| |||||| ||  ||||||| ||| |||||||| |||||||| ||||||  || ||||| ||||||||    
T  2935074 agagttaacttaaaatcaggttt-ctgcacaatcgtggcacgacggctgggcttcgcggcacgat-ggaggttttagttttttgggcaaggcactggaaa 2935171  T
Q  255 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatatttttggatgcagatttgttacaaatttaatgcaga 354  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||  |              
T  2935172 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatatttttgagagcagatttgttacagtt---------- 2935261  T
Q  355 tttgttacaaatttaaagcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||| |||| | |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  2935262 tttgttacagattttaggcagatttgttatagattttaagcaggacttttactataaatatagaccttgtatca 2935335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 156 - 300
Target Start/End: Original strand, 3878326 - 3878469
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgaggcaaggtactggaaaa 255  Q
    ||||||||||||||||||| ||| ||||||||| |||||| ||| |||||||| ||||||||||||||||||||||  |||||||||| | |||||||||    
T  3878326 agagttaacttaaaatcagattt-ctgcagaatcgtggcacgatggctgggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactggaaaa 3878424  T
Q  256 atcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggc 300  Q
    ||||||||||||||||||||||||||||||||||||| |||||||    
T  3878425 atcgtggcacgatggggtcgcatcgtggcacgatggtacgctggc 3878469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 156 - 300
Target Start/End: Original strand, 25542285 - 25542427
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgaggcaaggtactggaaaa 255  Q
    |||||||||||||||||| | |  |||||| | ||||||| |||||||||||| ||||||||||||||||||||||||||| |||||||| ||| |||||    
T  25542285 agagttaacttaaaatcaagat--ctgcaggaatgtggcacgattgctgggcaacgtggcacgattggaggtttcagttttaaggcaaggcacttgaaaa 25542382  T
Q  256 atcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggc 300  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  25542383 atcgtggcacgatgggatcgcatcgtggcacgatggtgcgctggc 25542427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 156 - 346
Target Start/End: Complemental strand, 27306763 - 27306574
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgaggcaaggtactggaaaa 255  Q
    |||||||||||||||| |||||||  ||| ||| |||||| ||| ||||| || |||||||||||||||||||||||||||||||||||  | |||||||    
T  27306763 agagttaacttaaaataaggtttt--gcaaaatcgtggcacgatggctggacaacgtggcacgattggaggtttcagttttgaggcaagtcattggaaaa 27306666  T
Q  256 atcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttggatgcagatttgttacaaattt 346  Q
    ||||||||||||||||||||| |||||||||||||||||||| || |  || || | |||| ||||||||| |||||||||||| |||||||    
T  27306665 atcgtggcacgatggggtcgcttcgtggcacgatggtgcgctagcagcgaataacagaaacgtatttttgggtgcagatttgttccaaattt 27306574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 156 - 346
Target Start/End: Original strand, 35383 - 35573
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcag-aattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgaggcaaggtactggaaa 254  Q
    |||||||||||||||||| | |  |||||| ||| |||||| ||||||| |||| ||||||||||||||||||||||  |||||||||| | ||||||||    
T  35383 agagttaacttaaaatcaagat--ctgcaggaatcgtggcacgattgctaggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactggaaa 35480  T
Q  255 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttggatgcagatttgttacaaattt 346  Q
    |||||||||||||||||||||||||||||| |||| |||||||||| |  || |  | |||| ||||||||| |||||||||||| |||||||    
T  35481 aatcgtggcacgatggggtcgcatcgtggcccgatcgtgcgctggcagcaaatagcagaaacgtatttttgggtgcagatttgttccaaattt 35573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 156 - 346
Target Start/End: Original strand, 44318 - 44508
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcag-aattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgaggcaaggtactggaaa 254  Q
    |||||||||||||||||| | |  |||||| ||| |||||| |||| |||||||  |||||||||||||||||||||  ||||| |||| | ||||||||    
T  44318 agagttaacttaaaatcaagat--ctgcaggaatcgtggcacgatttctgggcaatgtggcacgattggaggtttcaagtttgacgcaaagcactggaaa 44415  T
Q  255 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttggatgcagatttgttacaaattt 346  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| |  || || | |||||||||||||| |||||||||||  |||||||    
T  44416 aatcatggcacgatggggtcgcatcgtggcacgatggtgcgctggcagcaaataacataaacatatttttgggtgcagatttgtaccaaattt 44508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 156 - 270
Target Start/End: Original strand, 26804349 - 26804462
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgaggcaaggtactggaaaa 255  Q
    ||||||||||||||||||||||| || |||||| |||||| ||| |||||||| ||||| |||||||||||||||||||||||||||||| | |||||||    
T  26804349 agagttaacttaaaatcaggttt-ctacagaatcgtggcacgatggctgggcaacgtggtacgattggaggtttcagttttgaggcaaggcagtggaaaa 26804447  T
Q  256 atcgtggcacgatgg 270  Q
    |||||||||||||||    
T  26804448 atcgtggcacgatgg 26804462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 156 - 267
Target Start/End: Complemental strand, 1049809 - 1049699
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcag-aattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgaggcaaggtactggaaa 254  Q
    |||||||||||||||||| | |  |||||| ||| |||||| |||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  1049809 agagttaacttaaaatcaagat--ctgcaggaatcgtggcacgattgctgggcaacgtggcacgattggaggtttcagttttgaagcaaggtactggaaa 1049712  T
Q  255 aatcgtggcacga 267  Q
    |||||||||||||    
T  1049711 aatcgtggcacga 1049699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 156 - 300
Target Start/End: Original strand, 18567367 - 18567510
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaatt-gtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgaggcaaggtactggaaa 254  Q
    |||||| |||||||||||||||  || ||||| | |||||| ||| ||||||||  ||||||||||||||||||||||||||||||||||  ||||||      
T  18567367 agagttgacttaaaatcaggtt--ctacagaaatcgtggcacgatagctgggcaaagtggcacgattggaggtttcagttttgaggcaagtcactggatt 18567464  T
Q  255 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggc 300  Q
      |||||||||||||||||| || | ||||||||||||||||||||    
T  18567465 tttcgtggcacgatggggtcacaacttggcacgatggtgcgctggc 18567510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 156 - 300
Target Start/End: Complemental strand, 31435582 - 31435439
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaatt-gtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgaggcaaggtactggaaa 254  Q
    |||||| |||||||||||||||  || ||||| | |||||| ||| ||||||||  ||||||||||||||||||||||||||||||||||  ||||||      
T  31435582 agagttgacttaaaatcaggtt--ctacagaaatcgtggcacgatagctgggcaaagtggcacgattggaggtttcagttttgaggcaagtcactggatt 31435485  T
Q  255 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggc 300  Q
      |||||||||||||||||| || | ||||||||||||||||||||    
T  31435484 tttcgtggcacgatggggtcacaacttggcacgatggtgcgctggc 31435439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 156 - 270
Target Start/End: Complemental strand, 40837257 - 40837144
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttg-aggcaaggtactggaaa 254  Q
    ||||||||||||||||||||||| ||||||||| |||||| ||| |  || || ||||||||||| |||||||||||||||  |||||||| ||||||||    
T  40837257 agagttaacttaaaatcaggttt-ctgcagaatcgtggcacgatggtcggacaacgtggcacgat-ggaggtttcagttttttaggcaaggcactggaaa 40837160  T
Q  255 aatcgtggcacgatgg 270  Q
    ||||||||||||||||    
T  40837159 aatcgtggcacgatgg 40837144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 372 - 428
Target Start/End: Original strand, 35555 - 35611
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || ||||||||| | ||||||||||||||||||||||||||||||    
T  35555 gcagatttgttccaaattttaagcgatacttttactataaatatagaccttgtatca 35611  T

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Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 372 - 428
Target Start/End: Complemental strand, 27306592 - 27306536
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || ||||||||| | ||||||||||||||||||||||||||||||    
T  27306592 gcagatttgttccaaattttaagcgatacttttactataaatatagaccttgtatca 27306536  T

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Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 247 - 323
Target Start/End: Original strand, 40946168 - 40946244
Alignment:
Q  247 actggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatattttt 323  Q
    ||||||||||||||| |||||| || ||| |||||| |||||||||||| | |  ||||||||||||||||||||||    
T  40946168 actggaaaaatcgtgtcacgattggatcgaatcgtgccacgatggtgcgattgaagataaaaataaaacatattttt 40946244  T

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Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 372 - 426
Target Start/End: Complemental strand, 1049658 - 1049604
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtat 426  Q
    ||||||||||| || ||||||||| | ||||||||||||||||||||||||||||    
T  1049658 gcagatttgttccaaattttaagcgaaacttttactataaatatagaccttgtat 1049604  T

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Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 372 - 428
Target Start/End: Original strand, 44490 - 44546
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||  || ||||||||| | ||||||||||||||||||||||||||||||    
T  44490 gcagatttgtaccaaattttaagcgatacttttactataaatatagaccttgtatca 44546  T

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Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 372 - 428
Target Start/End: Original strand, 22392399 - 22392455
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || ||| ||||| | ||||||||||||||||||||||||||||||    
T  22392399 gcagatttgttccaaattgtaagcgatacttttactataaatatagaccttgtatca 22392455  T

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Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 372 - 424
Target Start/End: Original strand, 26804499 - 26804551
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgt 424  Q
    ||||||||||| || ||||||||| | ||||||||||||||||||||||||||    
T  26804499 gcagatttgttccaaattttaagcgatacttttactataaatatagaccttgt 26804551  T

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Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 372 - 428
Target Start/End: Complemental strand, 40837105 - 40837049
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || ||||||||  | ||||||||||||||||||||||||||||||    
T  40837105 gcagatttgttccaaattttaagggaaacttttactataaatatagaccttgtatca 40837049  T

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Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 374 - 428
Target Start/End: Original strand, 25542459 - 25542513
Alignment:
Q  374 agatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    |||||| || || ||||||||| | ||||||||||||||||||||||||||||||    
T  25542459 agatttattccaaattttaagcgaaacttttactataaatatagaccttgtatca 25542513  T

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Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 277 - 346
Target Start/End: Complemental strand, 40837158 - 40837087
Alignment:
Q  277 atcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttgga-tgcagatttgttacaaattt 346  Q
    ||||||||||||||||| |||||| |  ||||||| |||||||||||| || |||||||||||| |||||||    
T  40837158 atcgtggcacgatggtgtgctggcagcgaaaaatagaaacatattttttgagtgcagatttgttccaaattt 40837087  T

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Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 378 - 428
Target Start/End: Original strand, 18567545 - 18567595
Alignment:
Q  378 ttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||| || ||||||||| | |||||||||||||||||||| |||||||||    
T  18567545 ttgttccaaattttaagcgatacttttactataaatatagatcttgtatca 18567595  T

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Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 249 - 299
Target Start/End: Original strand, 22392319 - 22392369
Alignment:
Q  249 tggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctgg 299  Q
    |||| |||||||| ||||||||| ||||| ||||| |||||||||||||||    
T  22392319 tggagaaatcgtgccacgatgggatcgcaacgtggtacgatggtgcgctgg 22392369  T

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Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 378 - 428
Target Start/End: Complemental strand, 31435404 - 31435354
Alignment:
Q  378 ttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||| || ||||||||| | |||||||||||||||||||| |||||||||    
T  31435404 ttgttccaaattttaagcgatacttttactataaatatagatcttgtatca 31435354  T

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Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 399 - 428
Target Start/End: Original strand, 1606423 - 1606452
Alignment:
Q  399 acttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||||||||||||||||||    
T  1606423 acttttactataaatatagaccttgtatca 1606452  T

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Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 399 - 428
Target Start/End: Original strand, 3035670 - 3035699
Alignment:
Q  399 acttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||||||||||||||||||    
T  3035670 acttttactataaatatagaccttgtatca 3035699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 399 - 428
Target Start/End: Complemental strand, 7349615 - 7349586
Alignment:
Q  399 acttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||||||||||||||||||    
T  7349615 acttttactataaatatagaccttgtatca 7349586  T

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Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 399 - 428
Target Start/End: Original strand, 11757177 - 11757206
Alignment:
Q  399 acttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||||||||||||||||||    
T  11757177 acttttactataaatatagaccttgtatca 11757206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 399 - 428
Target Start/End: Original strand, 18345490 - 18345519
Alignment:
Q  399 acttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||||||||||||||||||    
T  18345490 acttttactataaatatagaccttgtatca 18345519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 399 - 428
Target Start/End: Original strand, 20299407 - 20299436
Alignment:
Q  399 acttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||||||||||||||||||    
T  20299407 acttttactataaatatagaccttgtatca 20299436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 399 - 428
Target Start/End: Original strand, 28485515 - 28485544
Alignment:
Q  399 acttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||||||||||||||||||    
T  28485515 acttttactataaatatagaccttgtatca 28485544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 399 - 428
Target Start/End: Original strand, 38393935 - 38393964
Alignment:
Q  399 acttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||||||||||||||||||    
T  38393935 acttttactataaatatagaccttgtatca 38393964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 399 - 428
Target Start/End: Original strand, 38396239 - 38396268
Alignment:
Q  399 acttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||||||||||||||||||    
T  38396239 acttttactataaatatagaccttgtatca 38396268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 399 - 428
Target Start/End: Complemental strand, 43253860 - 43253831
Alignment:
Q  399 acttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||||||||||||||||||    
T  43253860 acttttactataaatatagaccttgtatca 43253831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 400 - 428
Target Start/End: Original strand, 9680768 - 9680796
Alignment:
Q  400 cttttactataaatatagaccttgtatca 428  Q
    |||||||||||||||||||||||||||||    
T  9680768 cttttactataaatatagaccttgtatca 9680796  T

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Target: chr5 (Bit Score: 155; Significance: 4e-82; HSPs: 69)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 156 - 428
Target Start/End: Complemental strand, 15355061 - 15354789
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgagg-caaggtactggaaa 254  Q
    ||||||||||||||||||||||| ||||| ||| |||||| ||  ||||||| ||| |||||||| |||||||| ||||||  || ||||| ||||||||    
T  15355061 agagttaacttaaaatcaggttt-ctgcacaatcgtggcacgacagctgggcttcgcggcacgat-ggaggttttagttttttgggcaaggcactggaaa 15354964  T
Q  255 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatatttttggatgcagatttgttaca-aatttaatgcag 353  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||   |||  | |||    
T  15354963 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatatttttgggagcagatttgttacagtttttgttacag 15354864  T
Q  354 atttgttacaaatttaaagcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||| | |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  15354863 atttgttacaaattttaggcagatttgttatagattttaagcaggacttttactataaatatagaccttgtatca 15354789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 156 - 428
Target Start/End: Complemental strand, 15357337 - 15357065
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgagg-caaggtactggaaa 254  Q
    ||||||||||||||||||||||| ||||| ||| |||||| ||  ||||||| ||| |||||||| |||||||| ||||||  || ||||| ||||||||    
T  15357337 agagttaacttaaaatcaggttt-ctgcacaatcgtggcacgacagctgggcttcgcggcacgat-ggaggttttagttttttgggcaaggcactggaaa 15357240  T
Q  255 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatatttttggatgcagatttgttaca-aatttaatgcag 353  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||   |||  | |||    
T  15357239 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatatttttgggagcagatttgttacagtttttgttacag 15357140  T
Q  354 atttgttacaaatttaaagcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||| | |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  15357139 atttgttacaaattttaggcagatttgttatagattttaagcaggacttttactataaatatagaccttgtatca 15357065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 156 - 428
Target Start/End: Original strand, 10756964 - 10757236
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgagg-caaggtactggaaa 254  Q
    ||||||||||||||||||||||| ||||| ||| || ||| ||  ||||||| ||| |||||||| |||||||| ||||||  || ||||| ||||||||    
T  10756964 agagttaacttaaaatcaggttt-ctgcacaatcgtagcacgacggctgggcttcgcggcacgat-ggaggttttagttttttgggcaaggcactggaaa 10757061  T
Q  255 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatatttttggatgcagatttgttaca-aatttaatgcag 353  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||   |||  | ||     
T  10757062 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatatttttgggagcagatttgttacagtttttgttacaa 10757161  T
Q  354 atttgttacaaatttaaagcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||| | |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  10757162 atttgttacaaattttaggcagatttgttatagattttaagcaggacttttactataaatatagaccttgtatca 10757236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 156 - 428
Target Start/End: Original strand, 23664838 - 23665110
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgaggcaa-ggtactggaaa 254  Q
    ||||||||||||||||||||||| ||||| ||| |||||| ||  ||||||| ||| |||||||| |||| ||| | ||||  || || || ||||||||    
T  23664838 agagttaacttaaaatcaggttt-ctgcacaatcgtggcacgacagctgggcttcgcggcacgat-ggagtttttatttttttgggaaaggcactggaaa 23664935  T
Q  255 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatatttttggatgcagatttgttaca-aatttaatgcag 353  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||   |||  | |||    
T  23664936 aatcgtggcacgatgggatcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatatttttgggagcagatttgttacagtttttgttacag 23665035  T
Q  354 atttgttacaaatttaaagcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||| | |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  23665036 atttgttacaaattttaggcagatttgttatagattttaagcaggacttttactataaatatagaccttgtatca 23665110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 156 - 428
Target Start/End: Complemental strand, 23793749 - 23793477
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgaggcaa-ggtactggaaa 254  Q
    ||||||||||||||||||||||| ||||| ||| |||||| ||  ||||||| ||| |||||||| |||| ||| | ||||  || || || ||||||||    
T  23793749 agagttaacttaaaatcaggttt-ctgcacaatcgtggcacgacagctgggcttcgcggcacgat-ggagtttttatttttttgggaaaggcactggaaa 23793652  T
Q  255 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatatttttggatgcagatttgttaca-aatttaatgcag 353  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||   |||  | |||    
T  23793651 aatcgtggcacgatgggatcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatatttttgggagcagatttgttacagtttttgttacag 23793552  T
Q  354 atttgttacaaatttaaagcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||| | |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  23793551 atttgttacaaattttaggcagatttgttatagattttaagcaggacttttactataaatatagaccttgtatca 23793477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 156 - 428
Target Start/End: Original strand, 31542446 - 31542707
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgagg-caaggtactggaaa 254  Q
    ||||||||||||||||||||||| ||||| ||| ||| || ||| |||||||| ||||||||||| |||||||| ||||||  || ||||| ||||||||    
T  31542446 agagttaacttaaaatcaggttt-ctgcaaaatcgtgacacgatagctgggcaacgtggcacgat-ggaggttttagttttttgggcaaggcactggaaa 31542543  T
Q  255 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttggatgcagatttgttacaaatttaatgcag 353  Q
    |||||||||||||||||||| ||||| | |||||||||||||||||||||||||| | |||||||||||||| |||||||||||||           |||    
T  31542544 aatcgtggcacgatggggtctcatcgagacacgatggtgcgctggcggataaaaacagaaacatatttttgggtgcagatttgtta-----------cag 31542632  T
Q  354 atttgttacaaatttaaagcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31542633 atttgttacagattttaagcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 31542707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 156 - 428
Target Start/End: Original strand, 23667113 - 23667385
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgaggcaa-ggtactggaaa 254  Q
    ||||||||||||||||||||||| ||||| ||| |||||| ||  ||||||| ||| |||||||| |||| ||| | ||||  || || || ||||||||    
T  23667113 agagttaacttaaaatcaggttt-ctgcacaatcgtggcacgacagctgggcttcgcggcacgat-ggagtttttatttttttgggaaaggcactggaaa 23667210  T
Q  255 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatatttttggatgcagatttgttaca-aatttaatgcag 353  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||   |||  | |||    
T  23667211 aatcgtggcacgatgggatcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatatttttgggagcagatttgttacagtttttgttacag 23667310  T
Q  354 atttgttacaaatttaaagcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||| | |||||||||||| |||||||||||| |||||| ||||||||||||||||||||||||    
T  23667311 atttgttacaaattttaggcagatttgttatagattttaagcatgactttaactataaatatagaccttgtatca 23667385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 156 - 373
Target Start/End: Complemental strand, 34477628 - 34477412
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttg-aggcaaggtactggaaa 254  Q
    |||||||||||||||||| |||| ||||||||| |||||| ||| |||||||| ||||||||||| |||||||| ||||||  |||||||| ||||||||    
T  34477628 agagttaacttaaaatcaagttt-ctgcagaatcgtggcacgatggctgggcaacgtggcacgat-ggaggttttagttttttaggcaaggcactggaaa 34477531  T
Q  255 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatatttttggatgcagatttgttacaaatttaatgcaga 354  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||   |||||    
T  34477530 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatatttttgggtgcagatttgttacagattttgagcaga 34477431  T
Q  355 tttgttacaaatttaaagc 373  Q
    ||||||||| |||| ||||    
T  34477430 tttgttacagattttaagc 34477412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 208 - 428
Target Start/End: Complemental strand, 31179899 - 31179678
Alignment:
Q  208 atcgtggcacgattggaggtttcagttttgagg-caaggtactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataa 306  Q
    ||||||||||||| |||||||| ||||||  || ||||  |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||    
T  31179899 atcgtggcacgat-ggaggttttagttttttgggcaagacactggaaaaatcgtggcacgatggggtctcatcgtggcacgatggtgcgctggcgggtaa 31179801  T
Q  307 aaataaaacatatttttggatgcagatttgttaca-aatttaatgcagatttgttacaaatttaaagcagatttgttacagattttaagcaagactttta 405  Q
    ||||||||| |||||||||  ||||||||||||||   |||  | ||||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  31179800 aaataaaacgtatttttgggagcagatttgttacagtttttgttacagatttgttacaaatttaaagcagatttgttatagattttaagcaggactttta 31179701  T
Q  406 ctataaatatagaccttgtatca 428  Q
    |||||||||||||| ||||||||    
T  31179700 ctataaatatagacattgtatca 31179678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 156 - 341
Target Start/End: Original strand, 10749509 - 10749693
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgagg-caaggtactggaaa 254  Q
    ||||||||||||||||||||||| ||||| ||| |||||| ||  ||||||| ||| |||||||| |||||||| ||||||  || ||||| ||||||||    
T  10749509 agagttaacttaaaatcaggttt-ctgcacaatcgtggcacgacggctgggcttcgcggcacgat-ggaggttttagttttttgggcaaggcactggaaa 10749606  T
Q  255 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatatttttggatgcagatttgttaca 341  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  10749607 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatatttttgggagcagatttgttaca 10749693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 156 - 374
Target Start/End: Original strand, 31544802 - 31545020
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgagg-caaggtactggaaa 254  Q
    ||||||||||||||||||||||| ||||| ||| |||||| ||| |||||||| ||||||||||| |||||||| ||||||  || ||||| ||||||||    
T  31544802 agagttaacttaaaatcaggttt-ctgcaaaatcgtggcacgatagctgggcaacgtggcacgat-ggaggttttagttttttgggcaaggcactggaaa 31544899  T
Q  255 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttggatgcagatttgttacaaatttaatgcag 353  Q
    |||||||||||||||||||| ||||| | |||||||||||||||||||||||||| | |||||||||||||| ||||||||| ||||| |||| | ||||    
T  31544900 aatcgtggcacgatggggtctcatcgagacacgatggtgcgctggcggataaaaacagaaacatatttttgggtgcagatttattacagattttaagcag 31544999  T
Q  354 atttgttacaaatttaaagca 374  Q
    |||||||||| |||| |||||    
T  31545000 atttgttacagattttaagca 31545020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 154 - 300
Target Start/End: Original strand, 4236372 - 4236517
Alignment:
Q  154 taagagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgaggcaaggtactggaa 253  Q
    ||||||||||||||||||||| ||| |||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||| |||||||| |||||||    
T  4236372 taagagttaacttaaaatcagattt-ctgcagaattgtggcacgatggctgggcaacgtggcacgattggaggtttcagttttaaggcaaggcactggaa 4236470  T
Q  254 aaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggc 300  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||||    
T  4236471 aaatcgtggcacaatgggatcgcatcgtggcacgatggtgcgctggc 4236517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 277 - 428
Target Start/End: Complemental strand, 38960501 - 38960349
Alignment:
Q  277 atcgtggcacgatggtgcgctggcggataaaaataaaacatatttttggatgcagatttgttacaaatttaatg-cagatttgttacaaatttaaagcag 375  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||  |||  |  |||||||||||||||||| | ||||    
T  38960501 atcgtggcacgatggtgcgttggcggataaaaataaaacatatttttgggagcagatttgttacagtttttgttacagatttgttacaaattttaggcag 38960402  T
Q  376 atttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    |||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  38960401 atttgttatagattttaagcaggacttttactataaatatagaccttgtatca 38960349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 156 - 346
Target Start/End: Original strand, 38881849 - 38882039
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcag-aattgtggcatgattgctgggcatcgtggcacgattggaggtttcagtttt-gaggcaaggtactggaa 253  Q
    |||||||||||||||||| | |  |||||| ||| |||||| |||||||||||| ||||||||||| |||||||| |||||| ||||||||| |||||||    
T  38881849 agagttaacttaaaatcaagat--ctgcaggaatcgtggcacgattgctgggcaacgtggcacgat-ggaggttttagtttttgaggcaaggcactggaa 38881945  T
Q  254 aaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttggatgcagatttgttacaaattt 346  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  || || | |||| ||||||||| |||||||||||| |||||||    
T  38881946 aaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggcgaataacagaaacgtatttttgggtgcagatttgttccaaattt 38882039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 160 - 346
Target Start/End: Original strand, 16775905 - 16776091
Alignment:
Q  160 ttaacttaaaatcaggttttctgcag-aattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgaggcaaggtactggaaaaatc 258  Q
    |||||||||||||||| |  |||||| ||| |||||| ||| ||  |||| |||| |||||||||||||||||  |||||||||| | |||| |||||||    
T  16775905 ttaacttaaaatcaggat--ctgcaggaatcgtggcacgatggcaaggcaacgtgacacgattggaggtttcaagtttgaggcaaagcactgaaaaaatc 16776002  T
Q  259 gtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttggatgcagatttgttacaaattt 346  Q
    ||||||||||||||||||||||||||||||||||||||||||    ||||| | |||||||||||||  || ||||||||| |||||||    
T  16776003 gtggcacgatggggtcgcatcgtggcacgatggtgcgctggcatcgaaaaacagaaacatatttttgagtgaagatttgttccaaattt 16776091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 156 - 373
Target Start/End: Complemental strand, 34479968 - 34479773
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttg-aggcaaggtactggaaa 254  Q
    ||||||||||||||||||||||| ||||||||| |||||| ||| |||||||| ||||||||||| |||||||| ||||||  |||||||| ||||||||    
T  34479968 agagttaacttaaaatcaggttt-ctgcagaatcgtggcacgatggctgggcaacgtggcacgat-ggaggttttagttttttaggcaaggcactggaaa 34479871  T
Q  255 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatatttttggatgcagatttgttacaaatttaatgcaga 354  Q
    ||||                     |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||   |||||    
T  34479870 aatc---------------------gtggcacgatggtgcgctggcggataaaaataaaacatatttttgggtgcagatttgttacagattttgagcaga 34479792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 247 - 346
Target Start/End: Complemental strand, 21684906 - 21684806
Alignment:
Q  247 actggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttggatgcagatttgttacaaatt 345  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |  ||||| | |||||||||||||  |||||||||||||||||||    
T  21684906 actggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttacaaatt 21684807  T
Q  346 t 346  Q
    |    
T  21684806 t 21684806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 349 - 428
Target Start/End: Original strand, 31544973 - 31545052
Alignment:
Q  349 tgcagatttgttacaaatttaaagcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31544973 tgcagatttattacagattttaagcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 31545052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 156 - 270
Target Start/End: Complemental strand, 25921988 - 25921874
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagtttt--gaggcaaggtactggaa 253  Q
    ||||||||||||||||||||||| ||||||||| |||||| ||| | ||| || ||||||||||| |||||||||||||||  ||||||||| |||||||    
T  25921988 agagttaacttaaaatcaggttt-ctgcagaatcgtggcacgatggttggacaacgtggcacgat-ggaggtttcagttttttgaggcaaggcactggaa 25921891  T
Q  254 aaatcgtggcacgatgg 270  Q
    |||||||||||||||||    
T  25921890 aaatcgtggcacgatgg 25921874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 156 - 270
Target Start/End: Original strand, 659717 - 659829
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaatt-gtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgaggcaaggtactggaaa 254  Q
    ||||||||||||||||||||||  |||||||| | |||||| ||| ||| |||| ||||||||||||||||||||||| |||||||||||  ||||||||    
T  659717 agagttaacttaaaatcaggtt--ctgcagaaatcgtggcacgatggctaggcaacgtggcacgattggaggtttcag-tttgaggcaagtcactggaaa 659813  T
Q  255 aatcgtggcacgatgg 270  Q
    ||||||||||||||||    
T  659814 aatcgtggcacgatgg 659829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 248 - 424
Target Start/End: Complemental strand, 23742256 - 23742076
Alignment:
Q  248 ctggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcgg-ataaaaataaaacatattttt-ggatgcagatttgttacaaatt 345  Q
    |||||||| |||||||||||| || || ||||||||||| |||||    |||||| |||||||||||||| |||||| ||  ||||||| |||||| |||    
T  23742256 ctggaaaattcgtggcacgataggatcacatcgtggcacaatggtatcttggcgggataaaaataaaacaaattttttgggagcagattagttacagatt 23742157  T
Q  346 taatg-cagatttgttacaaatttaaagcagatttgttacagattttaa-gcaagacttttactataaatatagaccttgt 424  Q
    |  |  |||||||||||||||||| | |||||||||||| || |||||| ||| |||||||||||||||||||||||||||    
T  23742156 ttgttacagatttgttacaaattttaggcagatttgttataggttttaaagcaggacttttactataaatatagaccttgt 23742076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 156 - 270
Target Start/End: Original strand, 2174684 - 2174797
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttg-aggcaaggtactggaaa 254  Q
    ||||||||||||||||||||||| ||||||||| |||||| ||| ||  |||| ||||||||||| |||||||||||||||  |||||||| ||||||||    
T  2174684 agagttaacttaaaatcaggttt-ctgcagaatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagttttttaggcaaggcactggaaa 2174781  T
Q  255 aatcgtggcacgatgg 270  Q
    ||||||||||||||||    
T  2174782 aatcgtggcacgatgg 2174797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 349 - 428
Target Start/End: Complemental strand, 34477458 - 34477379
Alignment:
Q  349 tgcagatttgttacaaatttaaagcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||| ||||  ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||    
T  34477458 tgcagatttgttacagattttgagcagatttgttacagattttaagcgagacttttactataaaaatagaccttgtatca 34477379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 156 - 346
Target Start/End: Original strand, 21947774 - 21947961
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaatt-gtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgaggcaaggtactggaaa 254  Q
    ||||||||||||||||||||||  |||||||| | |||||| ||| ||| |||| |||| |||||||||||||||||||||||||| |||  ||||||      
T  21947774 agagttaacttaaaatcaggtt--ctgcagaaatcgtggcacgatggctaggcaacgtgacacgattggaggtttcagttttgaggtaagtcactggact 21947871  T
Q  255 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatatttttggatgcagatttgttacaaattt 346  Q
       |||||||||||||| | ||| ||||||||||||||| |   ||| |||| |   |||||||||||||| |||||||||||| |||||||    
T  21947872 ttacgtggcacgatgggattgcaacgtggcacgatggtgtggcagcgaataaca--gaaacatatttttgggtgcagatttgttccaaattt 21947961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 156 - 244
Target Start/End: Complemental strand, 18186583 - 18186496
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgaggcaag 244  Q
    |||||||||||||||||| |||| ||||||||| |||| | ||| |||||||| |||||||||||||||||||||||||||||||||||    
T  18186583 agagttaacttaaaatcaagttt-ctgcagaatcgtggtacgatggctgggcaacgtggcacgattggaggtttcagttttgaggcaag 18186496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 156 - 289
Target Start/End: Complemental strand, 20504448 - 20504316
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaatt-gtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgaggcaaggtactggaaa 254  Q
    ||||||||||||||||||||||  |||||||| | |||||| ||| |||||||| |||||||||||||||||||| ||||||||||||||  | ||||      
T  20504448 agagttaacttaaaatcaggtt--ctgcagaaatcgtggcacgatagctgggcaacgtggcacgattggaggttttagttttgaggcaagtcaatggatt 20504351  T
Q  255 aatcgtggcacgatggggtcgcatcgtggcacgat 289  Q
      ||||||||||||||| | ||| |||||||||||    
T  20504350 tttcgtggcacgatgggattgcaacgtggcacgat 20504316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 349 - 428
Target Start/End: Complemental strand, 34479819 - 34479740
Alignment:
Q  349 tgcagatttgttacaaatttaaagcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||| ||||  ||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||    
T  34479819 tgcagatttgttacagattttgagcagatttgttacagattttaagcgagacctttactataaaaatagaccttgtatca 34479740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 156 - 270
Target Start/End: Original strand, 39797853 - 39797966
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagtttt-gaggcaaggtactggaaa 254  Q
    ||||||||||||||||||||||| ||||| ||| |||||| ||| |||||||| ||||||| ||| ||||||||||||||| ||||||||| || |||||    
T  39797853 agagttaacttaaaatcaggttt-ctgcataatcgtggcacgatggctgggcaacgtggcatgat-ggaggtttcagtttttgaggcaaggcaccggaaa 39797950  T
Q  255 aatcgtggcacgatgg 270  Q
    |||| |||||||||||    
T  39797951 aatcatggcacgatgg 39797966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 210 - 288
Target Start/End: Complemental strand, 659927 - 659850
Alignment:
Q  210 cgtggcacgattggaggtttcagttttgaggcaaggtactggaaaaatcgtggcacgatggggtcgcatcgtggcacga 288  Q
    |||||||||||||||||||||||||| ||||||||  ||||||||||||||||||||||| |||||||| |||||||||    
T  659927 cgtggcacgattggaggtttcagttt-gaggcaagtcactggaaaaatcgtggcacgatgaggtcgcattgtggcacga 659850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 156 - 338
Target Start/End: Complemental strand, 20507997 - 20507815
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaatt-gtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgaggcaaggtactggaaa 254  Q
    ||||||||||||||||||||||  |||||||| | |||||| ||| | |||||| ||| |||||||||||||||| ||||||||||||||  | ||||      
T  20507997 agagttaacttaaaatcaggtt--ctgcagaaatcgtggcacgatagttgggcaacgtagcacgattggaggttttagttttgaggcaagtcattggatt 20507900  T
Q  255 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttggatgcagatttgtt 338  Q
      ||||||||||||||| | ||| | |||||||| |||||||| || |  || || | ||||||||||||||  |||||||||||    
T  20507899 tttcgtggcacgatgggattgcaacatggcacgaaggtgcgctagcagcgaataacagaaacatatttttgggagcagatttgtt 20507815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 372 - 428
Target Start/End: Complemental strand, 21684824 - 21684768
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  21684824 gcagatttgttacaaattttaagcaaaacttttactataaatatagaccttgtatca 21684768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 156 - 270
Target Start/End: Complemental strand, 31466492 - 31466379
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcag-aattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgaggcaaggtactggaaa 254  Q
    ||||||||||||||||||||||||  |||| ||| |||||| |||||  ||||| |||||||||||  || ||||||||| |||||||||  ||||||||    
T  31466492 agagttaacttaaaatcaggtttt--gcaggaatcgtggcacgattgaagggcaacgtggcacgatgagatgtttcagttatgaggcaagtcactggaaa 31466395  T
Q  255 aatcgtggcacgatgg 270  Q
    |||| |||||||||||    
T  31466394 aatcttggcacgatgg 31466379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 156 - 269
Target Start/End: Complemental strand, 12556437 - 12556325
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaatt-gtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgaggcaaggtactggaaa 254  Q
    |||||||| |||||||||||||  |||||||| | ||||||| || |||||||| |||||||| ||||||||||||||||||||||||||  ||||||      
T  12556437 agagttaatttaaaatcaggtt--ctgcagaaatcgtggcataatggctgggcaacgtggcacaattggaggtttcagttttgaggcaagtcactggatt 12556340  T
Q  255 aatcgtggcacgatg 269  Q
      |||||||||||||    
T  12556339 tttcgtggcacgatg 12556325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 156 - 244
Target Start/End: Complemental strand, 36402841 - 36402754
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgaggcaag 244  Q
    |||||||||||||||| |||||| |||||||||   |||| ||| |||||||| | | |||||||||||||||||||||||||||||||    
T  36402841 agagttaacttaaaattaggttt-ctgcagaatctaggcacgatggctgggcaacatagcacgattggaggtttcagttttgaggcaag 36402754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 373 - 428
Target Start/End: Original strand, 10749704 - 10749759
Alignment:
Q  373 cagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| |||||||||||| |||||||| ||||||||||||||||||||||    
T  10749704 cagatttgttatagattttaagcaggacttttagtataaatatagaccttgtatca 10749759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 156 - 270
Target Start/End: Complemental strand, 38960600 - 38960487
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgagg-caaggtactggaaa 254  Q
    ||||||||||||||||||||||| ||||| ||| |||||| ||  ||||||| | | |||||||| |||||||| ||||||  || ||||| ||||||||    
T  38960600 agagttaacttaaaatcaggttt-ctgcacaatcgtggcacgacggctgggctttgcggcacgat-ggaggttttagttttttgggcaaggcactggaaa 38960503  T
Q  255 aatcgtggcacgatgg 270  Q
    ||||||||||||||||    
T  38960502 aatcgtggcacgatgg 38960487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 372 - 426
Target Start/End: Original strand, 39798004 - 39798058
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtat 426  Q
    ||||||||||| || ||||||||||| ||||||||||||||||||||||||||||    
T  39798004 gcagatttgttccaaattttaagcaaaacttttactataaatatagaccttgtat 39798058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 372 - 428
Target Start/End: Complemental strand, 2818699 - 2818643
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || ||||||||| | ||||||||||||||||||||||||||||||    
T  2818699 gcagatttgttccaaattttaagcgatacttttactataaatatagaccttgtatca 2818643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 372 - 428
Target Start/End: Original strand, 4236545 - 4236601
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || ||||||||| | ||||||||||||||||||||||||||||||    
T  4236545 gcagatttgttccaaattttaagcgatacttttactataaatatagaccttgtatca 4236601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 247 - 323
Target Start/End: Original strand, 4409891 - 4409967
Alignment:
Q  247 actggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatattttt 323  Q
    ||||||||||||||| ||| || || ||| |||||| |||||||||||| |||| |||||||||||||| |||||||    
T  4409891 actggaaaaatcgtgccacaattggatcgaatcgtgccacgatggtgcgatggcagataaaaataaaacgtattttt 4409967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 372 - 428
Target Start/End: Original strand, 21947943 - 21947999
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || ||||||||| | ||||||||||||||||||||||||||||||    
T  21947943 gcagatttgttccaaattttaagcgatacttttactataaatatagaccttgtatca 21947999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 372 - 428
Target Start/End: Complemental strand, 25921836 - 25921780
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || ||||||||| | ||||||||||||||||||||||||||||||    
T  25921836 gcagatttgttccaaattttaagcgatacttttactataaatatagaccttgtatca 25921780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 372 - 428
Target Start/End: Complemental strand, 31466341 - 31466285
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || ||||||||| | ||||||||||||||||||||||||||||||    
T  31466341 gcagatttgttccaaattttaagcgacacttttactataaatatagaccttgtatca 31466285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 372 - 428
Target Start/End: Original strand, 38882021 - 38882077
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || ||||||||| | ||||||||||||||||||||||||||||||    
T  38882021 gcagatttgttccaaattttaagcgaaacttttactataaatatagaccttgtatca 38882077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 162 - 270
Target Start/End: Complemental strand, 2818836 - 2818729
Alignment:
Q  162 aacttaaaatcaggttttctgcagaatt-gtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgaggcaaggtactggaaaaatcgt 260  Q
    |||||||||| |||||  |||||||| | |||||| ||| ||| |||| | |||||||||||||||||||||||||||||||||  ||||||    ||||    
T  2818836 aacttaaaattaggtt--ctgcagaaatcgtggcacgatggctaggcaacatggcacgattggaggtttcagttttgaggcaagtcactggatttttcgt 2818739  T
Q  261 ggcacgatgg 270  Q
    ||||||||||    
T  2818738 ggcacgatgg 2818729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 156 - 217
Target Start/End: Complemental strand, 21684965 - 21684905
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcac 217  Q
    ||||||||||||||||||||||| ||||||||| |||||| ||| |||||||| ||||||||    
T  21684965 agagttaacttaaaatcaggttt-ctgcagaatcgtggcacgatggctgggcaacgtggcac 21684905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 247 - 323
Target Start/End: Original strand, 39854318 - 39854394
Alignment:
Q  247 actggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatattttt 323  Q
    ||||||||||||||| |||| | |  ||||||||||||||||||||||| | |  |||||||||||||| |||||||    
T  39854318 actggaaaaatcgtgtcacggttgaatcgcatcgtggcacgatggtgcgattgaagataaaaataaaacgtattttt 39854394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 373 - 428
Target Start/End: Complemental strand, 12556285 - 12556230
Alignment:
Q  373 cagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    |||||||||| || | ||||||| | ||||||||||||||||||||||||||||||    
T  12556285 cagatttgtttcaaaatttaagcgatacttttactataaatatagaccttgtatca 12556230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 323
Target Start/End: Original strand, 1240172 - 1240248
Alignment:
Q  247 actggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatattttt 323  Q
    ||||||||||||||| |||||| || ||| |||||| |||||||||||  | |  |||||||||||||| |||||||    
T  1240172 actggaaaaatcgtgccacgattggatcgaatcgtgccacgatggtgcaattgaagataaaaataaaacgtattttt 1240248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 323
Target Start/End: Original strand, 6744895 - 6744971
Alignment:
Q  247 actggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatattttt 323  Q
    ||||||||||||||| |||||| || ||| ||||||  ||||||||||| | |  |||||||||||||| |||||||    
T  6744895 actggaaaaatcgtgccacgattggatcgaatcgtgctacgatggtgcgattgaagataaaaataaaacgtattttt 6744971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 323
Target Start/End: Original strand, 6747138 - 6747214
Alignment:
Q  247 actggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatattttt 323  Q
    ||||||||| ||||| |||||| || ||| |||||| |||||||||||| | |  |||||||||||||| |||||||    
T  6747138 actggaaaagtcgtgccacgattggatcgaatcgtgccacgatggtgcgattgaagataaaaataaaacgtattttt 6747214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 372 - 428
Target Start/End: Complemental strand, 36402690 - 36402635
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || ||||||||| | |||||||||||||||||||||||| |||||    
T  36402690 gcagatttgtt-caaattttaagcgatacttttactataaatatagaccttatatca 36402635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 247 - 322
Target Start/End: Original strand, 42238048 - 42238123
Alignment:
Q  247 actggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatatttt 322  Q
    ||||||||||||||| |||||||   ||||| ||||||||||||||||| | | ||||||||  ||||| ||||||    
T  42238048 actggaaaaatcgtgccacgatgaaatcgcaacgtggcacgatggtgcgattgaggataaaacaaaaacgtatttt 42238123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 277 - 346
Target Start/End: Original strand, 2174783 - 2174853
Alignment:
Q  277 atcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttggatgcagatttgttacaaattt 346  Q
    |||||||||||||||||| ||||| |  ||||| | |||||||||||||  |||||||||||| |||||||    
T  2174783 atcgtggcacgatggtgcactggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattt 2174853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 374 - 427
Target Start/End: Original strand, 16776075 - 16776129
Alignment:
Q  374 agatttgttacagattttaagcaagacttttactat-aaatatagaccttgtatc 427  Q
    ||||||||| || ||||||||| | ||||||||||| ||||||||||||||||||    
T  16776075 agatttgttccaaattttaagcgatacttttactataaaatatagaccttgtatc 16776129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 399 - 428
Target Start/End: Complemental strand, 2144928 - 2144899
Alignment:
Q  399 acttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||||||||||||||||||    
T  2144928 acttttactataaatatagaccttgtatca 2144899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 399 - 428
Target Start/End: Complemental strand, 3373377 - 3373348
Alignment:
Q  399 acttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||||||||||||||||||    
T  3373377 acttttactataaatatagaccttgtatca 3373348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 399 - 428
Target Start/End: Original strand, 10586782 - 10586811
Alignment:
Q  399 acttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||||||||||||||||||    
T  10586782 acttttactataaatatagaccttgtatca 10586811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 399 - 428
Target Start/End: Original strand, 15552178 - 15552207
Alignment:
Q  399 acttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||||||||||||||||||    
T  15552178 acttttactataaatatagaccttgtatca 15552207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 399 - 428
Target Start/End: Original strand, 18468950 - 18468979
Alignment:
Q  399 acttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||||||||||||||||||    
T  18468950 acttttactataaatatagaccttgtatca 18468979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 371 - 428
Target Start/End: Complemental strand, 20507826 - 20507769
Alignment:
Q  371 agcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    |||||||||||| ||   ||||||| | |||||||||||||||||||| |||||||||    
T  20507826 agcagatttgttccaagatttaagcgatacttttactataaatatagatcttgtatca 20507769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 399 - 428
Target Start/End: Original strand, 25803959 - 25803988
Alignment:
Q  399 acttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||||||||||||||||||    
T  25803959 acttttactataaatatagaccttgtatca 25803988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 399 - 428
Target Start/End: Original strand, 27910388 - 27910417
Alignment:
Q  399 acttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||||||||||||||||||    
T  27910388 acttttactataaatatagaccttgtatca 27910417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 399 - 428
Target Start/End: Original strand, 27912473 - 27912502
Alignment:
Q  399 acttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||||||||||||||||||    
T  27912473 acttttactataaatatagaccttgtatca 27912502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 400 - 428
Target Start/End: Complemental strand, 1189949 - 1189921
Alignment:
Q  400 cttttactataaatatagaccttgtatca 428  Q
    |||||||||||||||||||||||||||||    
T  1189949 cttttactataaatatagaccttgtatca 1189921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 372 - 428
Target Start/End: Original strand, 2174835 - 2174891
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || ||||||||| |  ||||||||||||||| || ||||||||||    
T  2174835 gcagatttgttccaaattttaagcgatgcttttactataaatacaggccttgtatca 2174891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 247 - 323
Target Start/End: Complemental strand, 10529544 - 10529468
Alignment:
Q  247 actggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatattttt 323  Q
    ||||||||||||||| ||||||  | ||| |||||| ||||||| |||| | |  |||||||||||||| |||||||    
T  10529544 actggaaaaatcgtgccacgattagatcgaatcgtgccacgatgatgcgattgaagataaaaataaaacgtattttt 10529468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 400 - 428
Target Start/End: Original strand, 29748285 - 29748313
Alignment:
Q  400 cttttactataaatatagaccttgtatca 428  Q
    |||||||||||||||||||||||||||||    
T  29748285 cttttactataaatatagaccttgtatca 29748313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 400 - 428
Target Start/End: Original strand, 36208524 - 36208552
Alignment:
Q  400 cttttactataaatatagaccttgtatca 428  Q
    |||||||||||||||||||||||||||||    
T  36208524 cttttactataaatatagaccttgtatca 36208552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 155; Significance: 4e-82; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 156 - 428
Target Start/End: Complemental strand, 36559354 - 36559082
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgagg-caaggtactggaaa 254  Q
    ||||||||||||||||||||||| ||||| ||| |||||| ||  ||||||| ||| |||||||| |||||||| ||||||  || ||||| ||||||||    
T  36559354 agagttaacttaaaatcaggttt-ctgcacaatcgtggcacgacggctgggcttcgcggcacgat-ggaggttttagttttttgggcaaggcactggaaa 36559257  T
Q  255 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatatttttggatgcagatttgttaca-aatttaatgcag 353  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||   |||  | |||    
T  36559256 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatatttttgggagcagatttgttacagtttttgttacag 36559157  T
Q  354 atttgttacaaatttaaagcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||| | |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  36559156 atttgttacaaattttaggcagatttgttatagattttaagcaggacttttactataaatatagaccttgtatca 36559082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 156 - 428
Target Start/End: Complemental strand, 45332671 - 45332399
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgagg-caaggtactggaaa 254  Q
    ||||||||||||||||||||||| ||||||||| |||||| ||  ||||||| ||| |||||||| |||||||| ||||||  || ||||| ||||||||    
T  45332671 agagttaacttaaaatcaggttt-ctgcagaatcgtggcacgacggctgggcttcgcggcacgat-ggaggttttagttttttgggcaaggaactggaaa 45332574  T
Q  255 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatatttttggatgcagatttgttacaaatttaatgcaga 354  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||  |||  | ||||    
T  45332573 aatcgtggaacgatggggtcacatcgtggcacgatggtgcgctggcggataaaaataaaacgtatttttgggagcagatttgttacagttttgttacaga 45332474  T
Q  355 tttgttacaaatttaaagcagatttgttacaga-ttttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||| |||| | |||||||||||| ||| |||||||||  ||||||||||||||||||||||||||||||    
T  45332473 tttgttacagattttaggcagatttgttatagatttttaagcagaacttttactataaatatagaccttgtatca 45332399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 256 - 428
Target Start/End: Complemental strand, 36561532 - 36561359
Alignment:
Q  256 atcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatatttttggatgcagatttgttaca-aatttaatgcaga 354  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||   |||  | ||||    
T  36561532 atcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatatttttgggagcagatttgttacagtttttgttacaga 36561433  T
Q  355 tttgttacaaatttaaagcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    |||||||||||||| | |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  36561432 tttgttacaaattttaggcagatttgttatagattttaagcaggacttttactataaatatagaccttgtatca 36561359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 154 - 346
Target Start/End: Original strand, 27104517 - 27104709
Alignment:
Q  154 taagagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagtttt-gaggcaaggtactgga 252  Q
    ||||||||||||||||||||| ||| ||||||||| |||||| |||||  ||||| ||||||||||| ||||||||||||||| ||||||||| ||||||    
T  27104517 taagagttaacttaaaatcagattt-ctgcagaatcgtggcacgattgaagggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactgga 27104614  T
Q  253 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttggatgcagatttgttacaaattt 346  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| |  ||||| | |||||||||||||  |||||||||||| |||||||    
T  27104615 aaaatcgtggcacgatgggatcgcatcgtggcacgatggtgcgctggcagggaaaaacataaacatatttttgagtgcagatttgttccaaattt 27104709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 158 - 346
Target Start/End: Complemental strand, 19502544 - 19502356
Alignment:
Q  158 agttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttg-aggcaaggtactggaaaaa 256  Q
    ||||||||||||||||||||| ||||||||| |||||| ||| ||  |||| ||||||||||| |||||||||||||||  |||||||| ||||||||||    
T  19502544 agttaacttaaaatcaggttt-ctgcagaatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagttttttaggcaaggcactggaaaaa 19502447  T
Q  257 tcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttggatgcagatttgttacaaattt 346  Q
    |||||||||||||||||||||||||||||||||||||||||||||   || || | |||||||||||||| |||||||||| | |||||||    
T  19502446 tcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcgacgaataacagaaacatatttttggttgcagatttgatccaaattt 19502356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 156 - 346
Target Start/End: Complemental strand, 24162748 - 24162557
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagtttt--gaggcaaggtactggaa 253  Q
    |||||||||||||||||| |||| ||||||||| ||||||  || | |||||| ||||||||||| |||||||||||||||  ||||||||| |||||||    
T  24162748 agagttaacttaaaatcaagttt-ctgcagaatcgtggcacaatggttgggcaacgtggcacgat-ggaggtttcagttttttgaggcaaggcactggaa 24162651  T
Q  254 aaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttggatgcagatttgttacaaattt 346  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| |  || | || |||| ||||||||| |||||||||||| |||||||    
T  24162650 aaatcgtggcacgatggggtcgcatcgtggcacgattgtgcgctggctgcgaatattagaaacgtatttttgggtgcagatttgtttcaaattt 24162557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 156 - 343
Target Start/End: Complemental strand, 21521230 - 21521043
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcag-aattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgaggcaaggtactggaaa 254  Q
    ||||||||||||||||||||||  || ||| ||| |||||| ||| |||||||| ||||||||||||||||||||||||||||| |||||  ||||||||    
T  21521230 agagttaacttaaaatcaggtt--ctacaggaatcgtggcacgatggctgggcaacgtggcacgattggaggtttcagttttgaagcaagccactggaaa 21521133  T
Q  255 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttggatgcagatttgttacaaa 343  Q
    ||||||| ||||||||| ||||| |||||||||||||||||||||| |  || || | |||| ||||||||| |||||||||||| ||||    
T  21521132 aatcgtgccacgatgggatcgcaacgtggcacgatggtgcgctggcagcgaataacataaacgtatttttgggtgcagatttgttccaaa 21521043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 156 - 346
Target Start/End: Complemental strand, 6259350 - 6259160
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaatt-gtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgaggcaaggtactggaaa 254  Q
    ||||||||||||||||||||||  |||||||| | |||||| ||| |||| ||| |||||||| |||||| ||||||||||||||| |||  ||||||||    
T  6259350 agagttaacttaaaatcaggtt--ctgcagaaatcgtggcacgatggctgtgcaacgtggcactattggatgtttcagttttgaggaaagtcactggaaa 6259253  T
Q  255 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttggatgcagatttgttacaaattt 346  Q
    ||||||||||||||||| ||||| |||| |||||||||||||||||||  || || | |||||||||||||| |||||| ||||| |||||||    
T  6259252 aatcgtggcacgatgggatcgcaacgtgacacgatggtgcgctggcggtgaataacagaaacatatttttgggtgcagacttgttccaaattt 6259160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 156 - 346
Target Start/End: Original strand, 42064235 - 42064425
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcag-aattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgaggcaaggtactggaaa 254  Q
    |||||||||||||||||| | |  |||||| ||| |||||| |||||||||||| ||||| |||| |||||||||||  |||||||||| | ||||||||    
T  42064235 agagttaacttaaaatcaagat--ctgcaggaatcgtggcacgattgctgggcaacgtggtacgactggaggtttcaagtttgaggcaaagcactggaaa 42064332  T
Q  255 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttggatgcagatttgttacaaattt 346  Q
    ||||||||||||||||| || ||||||||||||||||||||||||| |  ||||| | ||||||||||||   |||||||||||| |||||||    
T  42064333 aatcgtggcacgatgggatcacatcgtggcacgatggtgcgctggcagcgaaaaacagaaacatattttttagtgcagatttgttccaaattt 42064425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 158 - 346
Target Start/End: Complemental strand, 19504878 - 19504690
Alignment:
Q  158 agttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttg-aggcaaggtactggaaaaa 256  Q
    ||||||||||||||||||||| | |||||||  ||||| ||| ||  |||| ||||||||||| |||||||| | ||||  |||||||| ||||||||||    
T  19504878 agttaacttaaaatcaggttt-cagcagaatcatggcacgatggcaaggcaacgtggcacgat-ggaggttttaattttttaggcaaggcactggaaaaa 19504781  T
Q  257 tcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttggatgcagatttgttacaaattt 346  Q
    |||||||||||||||||||||||||||||||||||||||||||||   || || | ||||| |||||| | |||||||||||| |||||||    
T  19504780 tcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcgacgaataacagaaacacatttttaggtgcagatttgttccaaattt 19504690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 158 - 270
Target Start/End: Complemental strand, 43624079 - 43623968
Alignment:
Q  158 agttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgaggcaaggtactggaaaaat 257  Q
    ||||||||||||||||||||| |||||||||  ||||| ||| |||||||| | |||||||||||||||||||||||||||||||||| |||| ||||||    
T  43624079 agttaacttaaaatcaggttt-ctgcagaatcatggcacgatggctgggcaacatggcacgattggaggtttcagttttgaggcaaggcactgaaaaaat 43623981  T
Q  258 cgtggcacgatgg 270  Q
    |||||||||||||    
T  43623980 cgtggcacgatgg 43623968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 156 - 291
Target Start/End: Complemental strand, 36561673 - 36561539
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgagg-caaggtactggaaa 254  Q
    ||||||||||||||||||||||| ||||| ||| |||||| ||  ||||||| ||  |||||||| |||||||| ||||||  || ||||| ||||||||    
T  36561673 agagttaacttaaaatcaggttt-ctgcacaatcgtggcacgacggctgggcttcacggcacgat-ggaggttttagttttttgggcaaggcactggaaa 36561576  T
Q  255 aatcgtggcacgatggggtcgcatcgtggcacgatgg 291  Q
    |||||||||||||||||||||||||||||||||||||    
T  36561575 aatcgtggcacgatggggtcgcatcgtggcacgatgg 36561539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 247 - 346
Target Start/End: Complemental strand, 13910489 - 13910389
Alignment:
Q  247 actggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttggatgcagatttgttacaaatt 345  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||| |  ||||| | |||||||||||||  |||||||||||| ||||||    
T  13910489 actggaaaaatcgtggcacgatggggtcgcattgtggcacgatggtgcgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaatt 13910390  T
Q  346 t 346  Q
    |    
T  13910389 t 13910389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 157 - 270
Target Start/End: Complemental strand, 6264658 - 6264546
Alignment:
Q  157 gagttaacttaaaatcaggttttctgcagaa-ttgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgaggcaaggtactggaaaa 255  Q
    |||||||||||||||||||||  |||||||| |||| ||| ||| | |||||| ||||||| ||||||| |||||||||||||||||||  |||||||||    
T  6264658 gagttaacttaaaatcaggtt--ctgcagaaattgttgcacgatggttgggcaacgtggcatgattggatgtttcagttttgaggcaagtcactggaaaa 6264561  T
Q  256 atcgtggcacgatgg 270  Q
    |||||||||||||||    
T  6264560 atcgtggcacgatgg 6264546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 156 - 338
Target Start/End: Complemental strand, 22407944 - 22407762
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcag-aattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgaggcaaggtactggaaa 254  Q
    |||||||| ||||||| |||||  |||||| ||| |||||| |||||  ||| | | ||||||||||||| |||||||||||||||||||  | || |||    
T  22407944 agagttaatttaaaattaggtt--ctgcaggaatcgtggcacgattgaagggtaacatggcacgattggatgtttcagttttgaggcaagtcagtgaaaa 22407847  T
Q  255 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttggatgcagatttgtt 338  Q
    ||| ||||||||||||| || || ||||||||||||||||| |||| |  || || | |||| ||||||||| ||||||||||||    
T  22407846 aattgtggcacgatgggatcacaacgtggcacgatggtgcgttggcagcgaataacagaaacgtatttttgggtgcagatttgtt 22407762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 156 - 271
Target Start/End: Complemental strand, 40032582 - 40032468
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaatt-gtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgaggcaaggtactggaaa 254  Q
    ||||||||||||||||||||||  |||||||| | |||||| ||| |||||||| |||||||||||||||||||||||||||||| ||||  ||||||      
T  40032582 agagttaacttaaaatcaggtt--ctgcagaaatcgtggcacgatggctgggcaacgtggcacgattggaggtttcagttttgagacaagtcactggatt 40032485  T
Q  255 aatcgtggcacgatggg 271  Q
      |||||||||||||||    
T  40032484 tttcgtggcacgatggg 40032468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 156 - 270
Target Start/End: Complemental strand, 18800815 - 18800702
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaatt-gtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgaggcaaggtactggaaa 254  Q
    |||||||||||||||||| |||  ||| |||| | |||||| | ||| |||||| |||| |||||||||| ||||||||| ||| |||||  ||||||||    
T  18800815 agagttaacttaaaatcatgtt--ctggagaaatcgtggcacgtttgttgggcaacgtgacacgattggatgtttcagttatgaagcaagtcactggaaa 18800718  T
Q  255 aatcgtggcacgatgg 270  Q
    ||| ||||||||||||    
T  18800717 aattgtggcacgatgg 18800702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 372 - 428
Target Start/End: Complemental strand, 22407772 - 22407716
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    |||||||||||  | ||||||||||| ||||||||||||||||||||||||||||||    
T  22407772 gcagatttgttcaaaattttaagcaatacttttactataaatatagaccttgtatca 22407716  T

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Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 372 - 428
Target Start/End: Complemental strand, 24162575 - 24162519
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || ||||||||| | ||||||||||||||||||||||||||||||    
T  24162575 gcagatttgtttcaaattttaagcgaaacttttactataaatatagaccttgtatca 24162519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 372 - 428
Target Start/End: Original strand, 27104691 - 27104747
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || ||||||||| | ||||||||||||||||||||||||||||||    
T  27104691 gcagatttgttccaaattttaagcgaaacttttactataaatatagaccttgtatca 27104747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 372 - 428
Target Start/End: Original strand, 42064407 - 42064463
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || ||||||||| | ||||||||||||||||||||||||||||||    
T  42064407 gcagatttgttccaaattttaagcgatacttttactataaatatagaccttgtatca 42064463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 372 - 428
Target Start/End: Complemental strand, 43623931 - 43623875
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || ||||||||||| |||||||||||||| |||||||||||||||    
T  43623931 gcagatttgttccaaattttaagcaatacttttactataaaaatagaccttgtatca 43623875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 372 - 428
Target Start/End: Complemental strand, 6264508 - 6264452
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || ||||||||| | | ||||||||||||||||||||||||||||    
T  6264508 gcagatttgttccaaattttaagcgatatttttactataaatatagaccttgtatca 6264452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 372 - 428
Target Start/End: Complemental strand, 13910407 - 13910351
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || ||||||||  | ||||||||||||||||||||||||||||||    
T  13910407 gcagatttgttccaaattttaagggaaacttttactataaatatagaccttgtatca 13910351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 372 - 428
Target Start/End: Complemental strand, 18800665 - 18800609
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || ||||||| | | ||||||||||||||||||||||||||||||    
T  18800665 gcagatttgttccaaattttaaacgatacttttactataaatatagaccttgtatca 18800609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 372 - 428
Target Start/End: Complemental strand, 19504708 - 19504652
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || ||||||||  | ||||||||||||||||||||||||||||||    
T  19504708 gcagatttgttccaaattttaagggaaacttttactataaatatagaccttgtatca 19504652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 372 - 428
Target Start/End: Complemental strand, 40032421 - 40032365
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| ||  |||||||| | ||||||||||||||||||||||||||||||    
T  40032421 gcagatttgttccaagttttaagcgatacttttactataaatatagaccttgtatca 40032365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 372 - 426
Target Start/End: Complemental strand, 6259178 - 6259124
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtat 426  Q
    ||||| ||||| || ||||||||| | ||||||||||||||||||||||||||||    
T  6259178 gcagacttgttccaaattttaagcgatacttttactataaatatagaccttgtat 6259124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 376 - 426
Target Start/End: Complemental strand, 22287695 - 22287645
Alignment:
Q  376 atttgttacagattttaagcaagacttttactataaatatagaccttgtat 426  Q
    ||||||| || ||||||||| | ||||||||||||||||||||||||||||    
T  22287695 atttgttccaaattttaagcgatacttttactataaatatagaccttgtat 22287645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 372 - 428
Target Start/End: Complemental strand, 21521058 - 21521002
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || | ||||||| | |||||||||||||||||| |||||||||||    
T  21521058 gcagatttgttccaaaatttaagcgatacttttactataaatataaaccttgtatca 21521002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 372 - 428
Target Start/End: Original strand, 35107192 - 35107248
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || ||||||||  | ||||||||||||||||||||| ||||||||    
T  35107192 gcagatttgttccaaattttaagggatacttttactataaatatagacattgtatca 35107248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 252 - 323
Target Start/End: Complemental strand, 45280425 - 45280354
Alignment:
Q  252 aaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatattttt 323  Q
    |||||||||| |||||| || ||| |||||| |||||||||||| | |  |||||||||||||| |||||||    
T  45280425 aaaaatcgtgccacgattggatcgaatcgtgccacgatggtgcgattgaagataaaaataaaacgtattttt 45280354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 399 - 428
Target Start/End: Complemental strand, 17897578 - 17897549
Alignment:
Q  399 acttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||||||||||||||||||    
T  17897578 acttttactataaatatagaccttgtatca 17897549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 399 - 428
Target Start/End: Complemental strand, 23452577 - 23452548
Alignment:
Q  399 acttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||||||||||||||||||    
T  23452577 acttttactataaatatagaccttgtatca 23452548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 399 - 428
Target Start/End: Complemental strand, 35215932 - 35215903
Alignment:
Q  399 acttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||||||||||||||||||    
T  35215932 acttttactataaatatagaccttgtatca 35215903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 372 - 428
Target Start/End: Complemental strand, 19502374 - 19502318
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||| | || ||||||||  | | ||||||||||||||||||||||||||||    
T  19502374 gcagatttgatccaaattttaagggaaaattttactataaatatagaccttgtatca 19502318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 400 - 428
Target Start/End: Original strand, 20589581 - 20589609
Alignment:
Q  400 cttttactataaatatagaccttgtatca 428  Q
    |||||||||||||||||||||||||||||    
T  20589581 cttttactataaatatagaccttgtatca 20589609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 372 - 428
Target Start/End: Complemental strand, 28462649 - 28462593
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || ||||||||    |||||||||||||||||| |||||||||||    
T  28462649 gcagatttgttccaaattttaagggttacttttactataaatataaaccttgtatca 28462593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 149; Significance: 1e-78; HSPs: 77)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 156 - 374
Target Start/End: Original strand, 18846927 - 18847147
Alignment:
Q  156 agagttaacttaaaatcaggtttt-ctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgaggcaaggtactggaaa 254  Q
    ||||||||||||||||||| |||| ||||||||| |||||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  18846927 agagttaacttaaaatcagatttttctgcagaatcgtggcacgattgttgggaatcgtggcacgattggaggtttcagttttgaggcaaggtactggaaa 18847026  T
Q  255 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttggatgcagatttgttacaaatttaatgcag 353  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||  ||||| | |||||||||||||| |||||||||||||||||||||| ||||    
T  18847027 aatcgtggtacgatggggtcgcatcgtggcacgatggtgcgctcgcggggaaaaacagaaacatatttttgggtgcagatttgttacaaatttaaagcag 18847126  T
Q  354 atttgttacaaatttaaagca 374  Q
    |||||||||| |||| |||||    
T  18847127 atttgttacagattttaagca 18847147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 156 - 428
Target Start/End: Complemental strand, 16932356 - 16932096
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgagg-caaggtactggaaa 254  Q
    ||||||||||||||||||||||| ||||||||| |||||| ||  |||||||| ||||||||||| |||||||| ||||||  || ||||| ||||||||    
T  16932356 agagttaacttaaaatcaggttt-ctgcagaatcgtggcacgacggctgggcaacgtggcacgat-ggaggttttagttttttgggcaaggcactggaaa 16932259  T
Q  255 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatatttttggatgcagatttgttacaaatttaatgcaga 354  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||||||           |||     
T  16932258 aatcgtggcacgatggggtctcatcgtggcacgatggtgcgctggcggataaaaataaaacgtatttttgggagcagatttgtta-----------cagt 16932170  T
Q  355 tttgttacaaatttaaagcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  16932169 tttgttacagattttaagcagatttgttacagattttaagcaggacttttactataaatataaaccttgtatca 16932096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 156 - 428
Target Start/End: Complemental strand, 22783313 - 22783053
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgagg-caaggtactggaaa 254  Q
    ||||||||||||||||||||||| ||||||||| |||| | ||| |||||||| ||||||||||| |||||||| ||||||  || ||||| ||||||||    
T  22783313 agagttaacttaaaatcaggttt-ctgcagaatcgtggtacgatagctgggcaacgtggcacgat-ggaggttttagttttttgggcaaggcactggaaa 22783216  T
Q  255 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatatttttggatgcagatttgttacaaatttaatgcaga 354  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||||||           |||     
T  22783215 aatcatggcacgatggggtctcatcgtggcacgatggtgcgctggcggataaaaataaaacgtatttttgggagcagatttgtta-----------cagt 22783127  T
Q  355 tttgttacaaatttaaagcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  22783126 tttgttacagattttaagcagatttgttacagattttaagcaggacttttactataaatataaaccttgtatca 22783053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 156 - 428
Target Start/End: Complemental strand, 16934710 - 16934450
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgagg-caaggtactggaaa 254  Q
    ||||||||||||||||||||||| ||||||||| |||||| ||  |||||||| | ||||||||| |||||||| ||||||  || ||||| ||||||||    
T  16934710 agagttaacttaaaatcaggttt-ctgcagaatcgtggcacgacggctgggcaacatggcacgat-ggaggttttagttttttgggcaaggcactggaaa 16934613  T
Q  255 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatatttttggatgcagatttgttacaaatttaatgcaga 354  Q
    |||||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||| |||||||||  ||||||||||||           |||     
T  16934612 aatcgtggcacgatggggtctcatcctggcacgatggtgcgctgtcggataaaaataaaacgtatttttgggagcagatttgtta-----------cagt 16934524  T
Q  355 tttgttacaaatttaaagcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  16934523 tttgttacagattttaagcagatttgttacagattttaagcaggacttttactataaatatagaccttgtatca 16934450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 156 - 428
Target Start/End: Complemental strand, 22780948 - 22780688
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgagg-caaggtactggaaa 254  Q
    ||||||||||||||||||||||| ||||||||| |||| | ||| |||||||| ||||||||||| |||||||| ||||||  || ||||| ||||||||    
T  22780948 agagttaacttaaaatcaggttt-ctgcagaatcgtggtacgatagctgggcaacgtggcacgat-ggaggttttagttttttgggcaaggcactggaaa 22780851  T
Q  255 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatatttttggatgcagatttgttacaaatttaatgcaga 354  Q
    |||| ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||||  ||||||||||||           |||     
T  22780850 aatcatggcacgatggggtctcattgtggcacgatggtgcgctggcggataaaaataaaacgtatttttgggagcagatttgtta-----------cagt 22780762  T
Q  355 tttgttacaaatttaaagcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  22780761 tttgttacagattttaagcagatttgttacagattttaagcaggacttttactataaatataaaccttgtatca 22780688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 156 - 346
Target Start/End: Original strand, 38408997 - 38409187
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgaggcaaggtactggaaaa 255  Q
    |||||||||||||||| || ||| ||||||||| |||||| |||||||||||||||||||||||||||||||||||  |||||||||| | |||||||||    
T  38408997 agagttaacttaaaattagattt-ctgcagaatcgtggcacgattgctgggcatcgtggcacgattggaggtttcaagtttgaggcaaagcactggaaaa 38409095  T
Q  256 atcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttggatgcagatttgttacaaattt 346  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||  ||||| | |||||||||||||  |||||||||||| |||||||    
T  38409096 atcgtggcacgatggggtcgcatcgtggcacgatggtgcgttggcggcgaaaaacagaaacatatttttgagtgcagatttgttccaaattt 38409187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 156 - 346
Target Start/End: Complemental strand, 11006777 - 11006586
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttg-aggcaaggtactggaaa 254  Q
    |||||||||||||||||||||||| |||||||| |||||| ||| |||||||| ||||||||||| |||||||||| ||||  |||||||| ||||||||    
T  11006777 agagttaacttaaaatcaggttttatgcagaatcgtggcacgatcgctgggcaacgtggcacgat-ggaggtttcaattttttaggcaaggcactggaaa 11006679  T
Q  255 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttggatgcagatttgttacaaattt 346  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |  ||||| | |||||||||||||| ||||||||||||||| ||||    
T  11006678 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcagcaaaaaacagaaacatatttttgggtgcagatttgttacagattt 11006586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 156 - 346
Target Start/End: Complemental strand, 31850134 - 31849944
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcag-aattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgaggcaaggtactggaaa 254  Q
    |||||||||||||||||| | |  |||||| |||||||||| |||||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||    
T  31850134 agagttaacttaaaatcaagat--ctgcaggaattgtggcacgattgctgggcaacgtggcacgattggaggtttcagttttggggcaaggcactggaaa 31850037  T
Q  255 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttggatgcagatttgttacaaattt 346  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| |  ||||| | |||||||||||||  |||||||||||| |||||||    
T  31850036 aatcttggcacgatggggtcgcatcgtggcacgatggtgcgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattt 31849944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 156 - 346
Target Start/End: Complemental strand, 36920121 - 36919932
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgaggcaaggtactggaaaa 255  Q
    ||||||||||||||||||||||  ||||| ||| |||||| ||| |||||||| |||||||||||||||||||||| ||||||||||||  |||||||||    
T  36920121 agagttaacttaaaatcaggtt--ctgcaaaatcgtggcacgatggctgggcaacgtggcacgattggaggtttcaattttgaggcaagtcactggaaaa 36920024  T
Q  256 atcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttggatgcagatttgttacaaattt 346  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |  || | || |||| ||||||||| |||||||||||| |||||||    
T  36920023 atcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcagcgaatagtagaaacgtatttttgggtgcagatttgttccaaattt 36919932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 156 - 363
Target Start/End: Complemental strand, 9177031 - 9176824
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttg-aggcaaggtactggaaa 254  Q
    ||||||||||||||||||||||| ||||||||| |||||| ||  | | |||| ||||||||||| |||||||| ||||||  |||||||| ||||||||    
T  9177031 agagttaacttaaaatcaggttt-ctgcagaatcgtggcacgacggttaggcaacgtggcacgat-ggaggttttagttttttaggcaaggcactggaaa 9176934  T
Q  255 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttggatgcagatttgttacaaatttaatgcag 353  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| |  ||||| | |||||||||||||| ||||||||||||| |||||||| ||||    
T  9176933 aatcgtggcacgatggggtctcatcgtggcacgatggtgcgctggcagggaaaaacagaaacatatttttgggtgcagatttgttataaatttaaagcag 9176834  T
Q  354 atttgttaca 363  Q
    ||||||||||    
T  9176833 atttgttaca 9176824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 154 - 346
Target Start/End: Original strand, 24888592 - 24888784
Alignment:
Q  154 taagagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgaggcaaggtactggaa 253  Q
    ||||||||||||||||||||| ||| |||||||||||||||| ||| ||| |||| ||||||||||||||||||||||  |||||||||| | |||||||    
T  24888592 taagagttaacttaaaatcagattt-ctgcagaattgtggcacgatggctaggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactggaa 24888690  T
Q  254 aaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttggatgcagatttgttacaaattt 346  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||| |  ||||| | |||||||||||||  |||||||||||| |||||||    
T  24888691 aaatcgtggcacgatgggatcgcatcgtggcacgatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattt 24888784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 156 - 346
Target Start/End: Complemental strand, 3825108 - 3824918
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgaggcaaggtactggaaaa 255  Q
    ||||||||||||||||||||||| ||||||||| ||| || ||| |||||||| | |||||||||||||||||||||||||||||||| | |||||||||    
T  3825108 agagttaacttaaaatcaggttt-ctgcagaatcgtgacacgatggctgggcaacatggcacgattggaggtttcagttttgaggcaaagcactggaaaa 3825010  T
Q  256 atcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttggatgcagatttgttacaaattt 346  Q
    ||| |||||| ||||||||||||||||||||||||||||| |||||   || || | |||| ||||||||| |||||||||||| |||||||    
T  3825009 atcatggcacaatggggtcgcatcgtggcacgatggtgcgttggcgacgaataacagaaacgtatttttgggtgcagatttgttccaaattt 3824918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 156 - 346
Target Start/End: Complemental strand, 36922029 - 36921840
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgaggcaaggtactggaaaa 255  Q
    ||||||||||||||||||||||  ||||| ||| |||| | ||| |||||||| | |||||||||||||||||||||||||||||||||  |||||||||    
T  36922029 agagttaacttaaaatcaggtt--ctgcaaaatcgtggtacgatggctgggcaacatggcacgattggaggtttcagttttgaggcaagtcactggaaaa 36921932  T
Q  256 atcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttggatgcagatttgttacaaattt 346  Q
    ||||||||||||||||||||||| |||||||||||||||  |||| |  || || | |||| |||||||||||||||||||||| |||||||    
T  36921931 atcgtggcacgatggggtcgcattgtggcacgatggtgcattggcagcgaataacagaaacgtatttttggatgcagatttgttccaaattt 36921840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 156 - 346
Target Start/End: Complemental strand, 5638002 - 5637814
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgaggcaaggtactggaaaa 255  Q
    ||||||||||||||||||||||| |||| |||| |||||| |||||||||||| ||||||||||| |||||||||||||||||||||||| |||||||||    
T  5638002 agagttaacttaaaatcaggttt-ctgcggaatcgtggcacgattgctgggcaacgtggcacgat-ggaggtttcagttttgaggcaaggcactggaaaa 5637905  T
Q  256 atcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttggatgcagatttgttacaaattt 346  Q
    ||| || ||||||||| ||||||||||||| ||||||| |||||| |  ||||| | |||| || |||||| |||||||||||| |||||||    
T  5637904 atcatgtcacgatgggatcgcatcgtggcatgatggtgagctggcagcgaaaaacagaaacgta-ttttgggtgcagatttgttccaaattt 5637814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 156 - 300
Target Start/End: Complemental strand, 22803268 - 22803125
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgaggcaaggtactggaaaa 255  Q
    ||||||||||||||||||  ||| ||  ||||| |||| | ||| |||||||| ||||||||||||||||||||||||||||||| |||| |||||||||    
T  22803268 agagttaacttaaaatcaaattt-ctatagaatcgtggtacgatggctgggcaacgtggcacgattggaggtttcagttttgaggaaaggcactggaaaa 22803170  T
Q  256 atcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggc 300  Q
    |||||||| ||||||||||||||||||||||||||||||||||||    
T  22803169 atcgtggctcgatggggtcgcatcgtggcacgatggtgcgctggc 22803125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 156 - 346
Target Start/End: Original strand, 51015044 - 51015234
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttg-aggcaaggtactggaaa 254  Q
    ||||||||||||||||||| ||| ||||||||| |||||||||| ||  |||| ||||||||||| |||||||||||||||  |||||||| ||||||||    
T  51015044 agagttaacttaaaatcagattt-ctgcagaatcgtggcatgatggcaaggcaacgtggcacgat-ggaggtttcagttttttaggcaaggcactggaaa 51015141  T
Q  255 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttggatgcagatttgttacaaattt 346  Q
    ||| |||||||||||||||||||||||||||||||||||||||||| |  || || | ||||||||||||   |||||||||||| |||||||    
T  51015142 aattgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcagcgaataacagaaacatatttttcagtgcagatttgttccaaattt 51015234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 156 - 341
Target Start/End: Complemental strand, 9174680 - 9174496
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttt-tgaggcaaggtactggaaa 254  Q
    ||||||||||||||||||||||  ||||||||| |||||| ||  ||| |||| ||| ||||||| |||||||| ||||| | |||||||| ||||||||    
T  9174680 agagttaacttaaaatcaggtt--ctgcagaatcgtggcacgacggctaggcaacgtagcacgat-ggaggttttagtttattaggcaaggcactggaaa 9174584  T
Q  255 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttggatgcagatttgttaca 341  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||| |  ||||| | |||||||||||||| |||||||||||||||    
T  9174583 aatcatggcacgatggggtctcatcgtggcacgatggtgcgctggcagggaaaaacagaaacatatttttgggtgcagatttgttaca 9174496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 233 - 374
Target Start/End: Complemental strand, 11009051 - 11008909
Alignment:
Q  233 ttttgaggcaaggtactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttggatgcag 331  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| |  ||||| | |||||||||||||| |||||    
T  11009051 tttttaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcactggcagcaaaaaacagaaacatatttttgggtgcag 11008952  T
Q  332 atttgttacaaatttaatgcagatttgttacaaatttaaagca 374  Q
    |||||||||| |||| | |||||||||||||| |||| |||||    
T  11008951 atttgttacagattttaagcagatttgttacagattttaagca 11008909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 194 - 346
Target Start/End: Original strand, 5198255 - 5198408
Alignment:
Q  194 catgattgctgggcatcgtggcacgattggaggtttcagttttgaggcaaggtactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtg 293  Q
    ||||||||||||||| |||||||||||||||| |||||  |||||||||| |  |||||||||||||||||||||||| || ||||||||||||||||||    
T  5198255 catgattgctgggcaacgtggcacgattggagatttcaagtttgaggcaaagctctggaaaaatcgtggcacgatgggatcacatcgtggcacgatggtg 5198354  T
Q  294 cgctggcggataaaaata-aaacatatttttggatgcagatttgttacaaattt 346  Q
    ||||||| |  ||||| | |||||||||||||  |||||||||||| |||||||    
T  5198355 cgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattt 5198408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 349 - 428
Target Start/End: Original strand, 18847100 - 18847179
Alignment:
Q  349 tgcagatttgttacaaatttaaagcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18847100 tgcagatttgttacaaatttaaagcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 18847179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 154 - 346
Target Start/End: Complemental strand, 37089912 - 37089719
Alignment:
Q  154 taagagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttg-aggcaaggtactgga 252  Q
    ||||||||||||||||||||| ||| ||||||||| |||||| ||| ||  |||| |||||||||||  || |||| ||||||  |||  ||| ||||||    
T  37089912 taagagttaacttaaaatcagattt-ctgcagaatcgtggcacgatggcaaggcaacgtggcacgatgagatgttttagttttttaggtgaggcactgga 37089814  T
Q  253 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttggatgcagatttgttacaaattt 346  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  || || | |||| ||||||| | |||||||||||| |||||||    
T  37089813 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggcgaataacagaaacgtatttttaggtgcagatttgttccaaattt 37089719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 349 - 428
Target Start/End: Complemental strand, 11008956 - 11008877
Alignment:
Q  349 tgcagatttgttacaaatttaaagcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11008956 tgcagatttgttacagattttaagcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 11008877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 156 - 346
Target Start/End: Complemental strand, 22044926 - 22044735
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcag-aattgtggcatgattgctgggcatcgtggcacgattggaggtttcagtttt---gaggcaaggtactgg 251  Q
    |||||||||||||||||| | |  |||||| ||| |||||| |||||  ||||| ||||||||||| |||||||||| ||||   ||||||||| |||||    
T  22044926 agagttaacttaaaatcaagat--ctgcaggaatcgtggcacgattgaagggcaacgtggcacgat-ggaggtttcattttttttgaggcaaggcactgg 22044830  T
Q  252 aaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttggatgcagatttgttacaaattt 346  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||||| |  ||||| | |||||||||||| | |||||||||||| |||||||    
T  22044829 aaaaatcgtggcacgatgggatcgcatcgtggcacgatggtgtgctggcagggaaaaacagaaacatatttttag-tgcagatttgttccaaattt 22044735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 156 - 346
Target Start/End: Original strand, 48486117 - 48486307
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaatt-gtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgaggcaaggtactggaaa 254  Q
    |||||||||||||||||||||   |||||||| | |||||| ||| |||| ||| |||||||||||||||||||||||||||||||||||  ||||||      
T  48486117 agagttaacttaaaatcaggtc--ctgcagaaatcgtggcacgatggctgagcaacgtggcacgattggaggtttcagttttgaggcaagtcactggatt 48486214  T
Q  255 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttggatgcagatttgttacaaattt 346  Q
      |||||||||||||||||| ||  ||||||| ||||||||||||| |  || || | |||| ||||||||| |||||||||||| |||||||    
T  48486215 tttcgtggcacgatggggtcacaatgtggcacaatggtgcgctggcagcgaataacagaaacgtatttttgggtgcagatttgttccaaattt 48486307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 349 - 428
Target Start/End: Complemental strand, 9176860 - 9176781
Alignment:
Q  349 tgcagatttgttacaaatttaaagcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  9176860 tgcagatttgttataaatttaaagcagatttgttacagtttttaagcaagacatttactataaatatagaccttgtatca 9176781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 197 - 291
Target Start/End: Original strand, 9148098 - 9148192
Alignment:
Q  197 gattgctgggcatcgtggcacgattggaggtttcagttttgaggcaaggtactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatgg 291  Q
    |||||||||||| |||||| |||||||||||||||  |||||||||| | ||||||||||||||||||||||||||| |||||||||||||||||    
T  9148098 gattgctgggcaacgtggcgcgattggaggtttcaagtttgaggcaaagcactggaaaaatcgtggcacgatggggttgcatcgtggcacgatgg 9148192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 156 - 270
Target Start/End: Original strand, 7941137 - 7941251
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagtttt--gaggcaaggtactggaa 253  Q
    ||||||||||||||||||||||| ||||||||| |||||| ||| |||||||| ||||||||||| |||||||||||||||  ||||||||| |||||||    
T  7941137 agagttaacttaaaatcaggttt-ctgcagaatcgtggcacgatggctgggcaacgtggcacgat-ggaggtttcagttttttgaggcaaggcactggaa 7941234  T
Q  254 aaatcgtggcacgatgg 270  Q
    |||| ||||||||||||    
T  7941235 aaatggtggcacgatgg 7941251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 156 - 270
Target Start/End: Original strand, 11434773 - 11434887
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagtttt--gaggcaaggtactggaa 253  Q
    ||||||||||||||||||||||| ||||||||| |||| | ||| |||||||| ||||||||||| |||||||||||||||  ||||||||  |||||||    
T  11434773 agagttaacttaaaatcaggttt-ctgcagaatcgtggtacgatggctgggcaacgtggcacgat-ggaggtttcagttttttgaggcaagacactggaa 11434870  T
Q  254 aaatcgtggcacgatgg 270  Q
    |||||||||||||||||    
T  11434871 aaatcgtggcacgatgg 11434887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 177 - 270
Target Start/End: Complemental strand, 22801355 - 22801262
Alignment:
Q  177 tttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgaggcaaggtactggaaaaatcgtggcacgatgg 270  Q
    ||||| |||||| |||||| ||| | |||||| |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  22801355 tttctacagaatcgtggcacgatggttgggcaacgtgacacgattggaggtttcagttttgaggcaaggaactggaaaaatcgtggcacgatgg 22801262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 210 - 346
Target Start/End: Original strand, 24880302 - 24880439
Alignment:
Q  210 cgtggcacgattggaggtttcagttttgaggcaaggtactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaa 309  Q
    |||||||||| ||||||||||||||||||||||||  ||||||    ||| ||||||||||| | ||| |||||||||||||||||||||| |  || ||    
T  24880302 cgtggcacgaatggaggtttcagttttgaggcaagtcactggatttttcgcggcacgatgggattgcaacgtggcacgatggtgcgctggcagcgaataa 24880401  T
Q  310 ta-aaacatatttttggatgcagatttgttacaaattt 346  Q
     | |||| |||||||||||||||||||||| |||||||    
T  24880402 cagaaacgtatttttggatgcagatttgttccaaattt 24880439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 372 - 428
Target Start/End: Complemental strand, 11006604 - 11006548
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11006604 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 11006548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 157 - 291
Target Start/End: Complemental strand, 52943002 - 52942869
Alignment:
Q  157 gagttaacttaaaatcaggttttctgcagaatt-gtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgaggcaaggtactggaaaa 255  Q
    |||||||||||||||||||||||  ||| || | |||||| ||| | |||||| ||||||||||||||||||||||| |||||||||||  |||| | |     
T  52943002 gagttaacttaaaatcaggtttt--gcaaaaatcgtggcacgatggttgggcaacgtggcacgattggaggtttcagctttgaggcaagtcactgaatat 52942905  T
Q  256 atcgtggcacgatggggtcgcatcgtggcacgatgg 291  Q
     |||||||||||||||||| || |||||||||||||    
T  52942904 ttcgtggcacgatggggtcacaacgtggcacgatgg 52942869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 156 - 346
Target Start/End: Complemental strand, 619982 - 619792
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgaggcaaggtactggaaaa 255  Q
    |||||||||||||||||||||| | |   ||||||| ||| |||||  || || |||||||| |||||| |||||||||||||||||||  | ||||       
T  619982 agagttaacttaaaatcaggttatgtag-gaattgtcgcacgattgaaggtcaacgtggcacaattggatgtttcagttttgaggcaagtcattggattt 619884  T
Q  256 atcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttggatgcagatttgttacaaattt 346  Q
     ||||||||||||||||||||| |||||||| |||||||||||||||  || || | |||||||||||||| |  |||||| || |||||||    
T  619883 ttcgtggcacgatggggtcgcaacgtggcacaatggtgcgctggcggcgaataacagaaacatatttttgggtagagattttttccaaattt 619792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 372 - 428
Target Start/End: Complemental strand, 9174509 - 9174453
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  9174509 gcagatttgttacagtttttaagcaagacttttactataaatatagaccttgtatca 9174453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 156 - 294
Target Start/End: Complemental strand, 40091950 - 40091813
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcag-aattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgaggcaaggtactggaaa 254  Q
    ||||||||||||||||||||||  |||||  ||| |||||| | | | |||| | |||||||||||||||| |||||||||||| | |||  | ||||||    
T  40091950 agagttaacttaaaatcaggtt--ctgcaataatcgtggcacggtggttgggtaacgtggcacgattggagatttcagttttgaagtaagccattggaaa 40091853  T
Q  255 aatcgtggcacgatggggtcgcatcgtggcacgatggtgc 294  Q
    ||||||| || |||||||||||| |||| |||||||||||    
T  40091852 aatcgtgccatgatggggtcgcaacgtgacacgatggtgc 40091813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 240 - 346
Target Start/End: Complemental strand, 22047135 - 22047030
Alignment:
Q  240 gcaaggtactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttggatgcagatttgtt 338  Q
    |||||| |||||||||||| |||||||||||| ||||||||||||||||||||| |||||| |  ||||| | |||||||||||| | ||||||||||||    
T  22047135 gcaaggcactggaaaaatc-tggcacgatgggatcgcatcgtggcacgatggtgtgctggcagggaaaaacagaaacatatttttag-tgcagatttgtt 22047038  T
Q  339 acaaattt 346  Q
     |||||||    
T  22047037 ccaaattt 22047030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 210 - 300
Target Start/End: Original strand, 24878840 - 24878930
Alignment:
Q  210 cgtggcacgattggaggtttcagttttgaggcaaggtactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggc 300  Q
    ||||||||||||||||||||||||||||| |||||  ||||||    ||||||||||||||| | ||| |||||||||||||| |||||||    
T  24878840 cgtggcacgattggaggtttcagttttgacgcaagtcactggatttttcgtggcacgatgggattgcaacgtggcacgatggtacgctggc 24878930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 372 - 428
Target Start/End: Complemental strand, 3824936 - 3824880
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||    
T  3824936 gcagatttgttccaaattttaagcaatacttttactataaatatagaccttgtatca 3824880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 372 - 428
Target Start/End: Original strand, 24888766 - 24888822
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||    
T  24888766 gcagatttgttccaaattttaagcaatacttttactataaatatagaccttgtatca 24888822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 372 - 428
Target Start/End: Complemental strand, 37089737 - 37089681
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||    
T  37089737 gcagatttgttccaaattttaagcaaaacttttactataaatatagaccttgtatca 37089681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 372 - 428
Target Start/End: Original strand, 47274697 - 47274753
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||    
T  47274697 gcagatttgtttcaaattttaagcaatacttttactataaatatagaccttgtatca 47274753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 372 - 428
Target Start/End: Original strand, 5198390 - 5198446
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || ||||||||| | ||||||||||||||||||||||||||||||    
T  5198390 gcagatttgttccaaattttaagcgatacttttactataaatatagaccttgtatca 5198446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 372 - 428
Target Start/End: Original strand, 11434925 - 11434981
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || ||||||||| | ||||||||||||||||||||||||||||||    
T  11434925 gcagatttgttccaaattttaagcgaaacttttactataaatatagaccttgtatca 11434981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 372 - 428
Target Start/End: Complemental strand, 22801225 - 22801169
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || ||||||||| | ||||||||||||||||||||||||||||||    
T  22801225 gcagatttgtttcaaattttaagcgatacttttactataaatatagaccttgtatca 22801169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 372 - 428
Target Start/End: Complemental strand, 22803097 - 22803041
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || ||||||||| | ||||||||||||||||||||||||||||||    
T  22803097 gcagatttgttccaaattttaagcgatacttttactataaatatagaccttgtatca 22803041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 372 - 428
Target Start/End: Complemental strand, 36919950 - 36919894
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || ||||||||| | ||||||||||||||||||||||||||||||    
T  36919950 gcagatttgttccaaattttaagcgatacttttactataaatatagaccttgtatca 36919894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 372 - 428
Target Start/End: Original strand, 38409169 - 38409225
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || ||||||||| | ||||||||||||||||||||||||||||||    
T  38409169 gcagatttgttccaaattttaagcgatacttttactataaatatagaccttgtatca 38409225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 372 - 428
Target Start/End: Original strand, 48486289 - 48486345
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || ||||||||| | ||||||||||||||||||||||||||||||    
T  48486289 gcagatttgttccaaattttaagcgatacttttactataaatatagaccttgtatca 48486345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 372 - 427
Target Start/End: Original strand, 24880421 - 24880476
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatc 427  Q
    ||||||||||| || ||||||||| | |||||||||||||||||||||||||||||    
T  24880421 gcagatttgttccaaattttaagcgatacttttactataaatatagaccttgtatc 24880476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 372 - 426
Target Start/End: Complemental strand, 5637832 - 5637778
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtat 426  Q
    ||||||||||| || ||||||||| | ||||||||||||||||||||||||||||    
T  5637832 gcagatttgttccaaattttaagcgatacttttactataaatatagaccttgtat 5637778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 258 - 346
Target Start/End: Complemental strand, 52942881 - 52942792
Alignment:
Q  258 cgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttggatgcagatttgttacaaattt 346  Q
    ||||||||||||||||| || |||||||||||| ||||||||| |  || || | |||||||||||| | |||||||||||| |||||||    
T  52942881 cgtggcacgatggggtcacaacgtggcacgatgatgcgctggcagcgaataacataaacatattttttggtgcagatttgttccaaattt 52942792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 372 - 428
Target Start/End: Original strand, 7941289 - 7941345
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || ||||||||| | ||||||||||||||||||||| ||||||||    
T  7941289 gcagatttgttccaaattttaagcgaaacttttactataaatatagacgttgtatca 7941345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 372 - 428
Target Start/End: Original strand, 9148221 - 9148277
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || ||||||||| | ||||||||||||||||||| ||||||||||    
T  9148221 gcagatttgttccaaattttaagcgatacttttactataaatataggccttgtatca 9148277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 372 - 428
Target Start/End: Complemental strand, 22044753 - 22044697
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || ||||||||| | ||||||||||||||||||| ||||||||||    
T  22044753 gcagatttgttccaaattttaagcgatacttttactataaatataggccttgtatca 22044697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 372 - 428
Target Start/End: Complemental strand, 36921858 - 36921802
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || ||||||||| | |||||||| |||||||||||||||||||||    
T  36921858 gcagatttgttccaaattttaagcgatacttttacaataaatatagaccttgtatca 36921802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 376 - 428
Target Start/End: Complemental strand, 40091774 - 40091722
Alignment:
Q  376 atttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||| || ||||||||| | ||||||||||||||||||||||||||||||    
T  40091774 atttgttccaaattttaagcgatacttttactataaatatagaccttgtatca 40091722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 372 - 428
Target Start/End: Original strand, 51015216 - 51015272
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || ||||||||| | ||||||||||||||||||||| ||||||||    
T  51015216 gcagatttgttccaaattttaagcgatacttttactataaatatagactttgtatca 51015272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 372 - 427
Target Start/End: Complemental strand, 22047048 - 22046993
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatc 427  Q
    ||||||||||| || ||||||||| | ||||||||||||||||||| |||||||||    
T  22047048 gcagatttgttccaaattttaagcgatacttttactataaatataggccttgtatc 22046993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 376 - 427
Target Start/End: Original strand, 24878963 - 24879014
Alignment:
Q  376 atttgttacagattttaagcaagacttttactataaatatagaccttgtatc 427  Q
    ||||||| || ||||||||| | |||||||||||||||||||||||||||||    
T  24878963 atttgttccaaattttaagcgatacttttactataaatatagaccttgtatc 24879014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 277 - 346
Target Start/End: Original strand, 11434873 - 11434943
Alignment:
Q  277 atcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttggatgcagatttgttacaaattt 346  Q
    |||||||||||||||||||||||| |  ||||| | |||||||||||||  |||||||||||| |||||||    
T  11434873 atcgtggcacgatggtgcgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattt 11434943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 372 - 426
Target Start/End: Complemental strand, 52942810 - 52942756
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtat 426  Q
    ||||||||||| || |||||||| || ||||| ||||||||||||||||||||||    
T  52942810 gcagatttgttccaaattttaagtaatactttcactataaatatagaccttgtat 52942756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 322
Target Start/End: Complemental strand, 4556494 - 4556422
Alignment:
Q  250 ggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatatttt 322  Q
    |||||||||||| |||||||   ||||| ||||||||||||||||| | |  |||||||||||||| ||||||    
T  4556494 ggaaaaatcgtgccacgatgaaatcgcaacgtggcacgatggtgcgattgaagataaaaataaaacgtatttt 4556422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 372 - 428
Target Start/End: Complemental strand, 8756613 - 8756557
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || ||| ||| | | ||||||||||||||||||||||||||||||    
T  8756613 gcagatttgttccaaattataaacgatacttttactataaatatagaccttgtatca 8756557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 323
Target Start/End: Complemental strand, 16689379 - 16689303
Alignment:
Q  247 actggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatattttt 323  Q
    ||||||||||||||| |||||||   ||||| ||||||||||||||||| | | ||||||||  ||||| |||||||    
T  16689379 actggaaaaatcgtgccacgatgaaatcgcaacgtggcacgatggtgcgattgaggataaaataaaaacgtattttt 16689303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 374 - 428
Target Start/End: Complemental strand, 619808 - 619754
Alignment:
Q  374 agatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    |||||| || || ||||||| | | ||||||||||||||||||||||||||||||    
T  619808 agattttttccaaattttaaacgatacttttactataaatatagaccttgtatca 619754  T

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Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 295
Target Start/End: Original strand, 8529011 - 8529060
Alignment:
Q  246 tactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 295  Q
    |||||||||||||||| |||||||  | ||||||||| ||||||||||||    
T  8529011 tactggaaaaatcgtgccacgatgaagccgcatcgtgccacgatggtgcg 8529060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 399 - 428
Target Start/End: Complemental strand, 14787769 - 14787740
Alignment:
Q  399 acttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||||||||||||||||||    
T  14787769 acttttactataaatatagaccttgtatca 14787740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 399 - 428
Target Start/End: Complemental strand, 17662574 - 17662545
Alignment:
Q  399 acttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||||||||||||||||||    
T  17662574 acttttactataaatatagaccttgtatca 17662545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 399 - 428
Target Start/End: Complemental strand, 22132735 - 22132706
Alignment:
Q  399 acttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||||||||||||||||||    
T  22132735 acttttactataaatatagaccttgtatca 22132706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 399 - 428
Target Start/End: Complemental strand, 22134966 - 22134937
Alignment:
Q  399 acttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||||||||||||||||||    
T  22134966 acttttactataaatatagaccttgtatca 22134937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 399 - 428
Target Start/End: Original strand, 24348211 - 24348240
Alignment:
Q  399 acttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||||||||||||||||||    
T  24348211 acttttactataaatatagaccttgtatca 24348240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 399 - 428
Target Start/End: Original strand, 25357634 - 25357663
Alignment:
Q  399 acttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||||||||||||||||||    
T  25357634 acttttactataaatatagaccttgtatca 25357663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 399 - 428
Target Start/End: Complemental strand, 47211082 - 47211053
Alignment:
Q  399 acttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||||||||||||||||||    
T  47211082 acttttactataaatatagaccttgtatca 47211053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 399 - 428
Target Start/End: Original strand, 53405124 - 53405153
Alignment:
Q  399 acttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||||||||||||||||||    
T  53405124 acttttactataaatatagaccttgtatca 53405153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 372 - 428
Target Start/End: Complemental strand, 31849962 - 31849906
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || ||||||||| | |||||||||| ||||||||  |||||||||    
T  31849962 gcagatttgttccaaattttaagcgatacttttactagaaatataggtcttgtatca 31849906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 247 - 323
Target Start/End: Original strand, 47868289 - 47868365
Alignment:
Q  247 actggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatattttt 323  Q
    ||||||||||||||| |||||| || ||  |||||| |||||| ||||| | |  |||||||||||||| |||||||    
T  47868289 actggaaaaatcgtgccacgattggatctaatcgtgccacgatagtgcgattgaagataaaaataaaacgtattttt 47868365  T

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Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 400 - 428
Target Start/End: Complemental strand, 52043765 - 52043737
Alignment:
Q  400 cttttactataaatatagaccttgtatca 428  Q
    |||||||||||||||||||||||||||||    
T  52043765 cttttactataaatatagaccttgtatca 52043737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 125; Significance: 3e-64; HSPs: 2)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 156 - 363
Target Start/End: Original strand, 5931 - 6137
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttg-aggcaaggtactggaaa 254  Q
    ||||||||||||||||||||||| ||||| ||| |||||| ||  ||||||| ||| |||||||| |||||||| ||||||  |||||||| ||||||||    
T  5931 agagttaacttaaaatcaggttt-ctgcacaatcgtggcacgacggctgggcttcgcggcacgat-ggaggttttagttttttaggcaaggcactggaaa 6028  T
Q  255 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatatttttggatgcagatttgttacaaatttaatgcaga 354  Q
    |||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  6029 aatcgtggcatgatggggtctcatcatggcacgatggtgcgctggcggataaaaataaaacatatttttgggtgcagatttgttacaaatttaaagcaga 6128  T
Q  355 tttgttaca 363  Q
    |||||||||    
T  6129 tttgttaca 6137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 349 - 428
Target Start/End: Original strand, 6101 - 6180
Alignment:
Q  349 tgcagatttgttacaaatttaaagcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  6101 tgcagatttgttacaaatttaaagcagatttgttacagtttttaagcaggacttttactataaatatagaccttgtatca 6180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 122; Significance: 2e-62; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 154 - 374
Target Start/End: Original strand, 16225889 - 16226107
Alignment:
Q  154 taagagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgagg-caaggtactgga 252  Q
    ||||||||||||||||||||||||| ||||||||| |||||| ||  | |||||| ||||||||||| |||||||| ||||||  || ||||| ||||||    
T  16225889 taagagttaacttaaaatcaggttt-ctgcagaatcgtggcacgacggttgggcaacgtggcacgat-ggaggttttagttttttgggcaaggcactgga 16225986  T
Q  253 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatatttttggatgcagatttgttacaaatttaatgca 352  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| |||| | | |    
T  16225987 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacata-ttttgggtgcagatttgttacagattttaagta 16226085  T
Q  353 gatttgttacaaatttaaagca 374  Q
    ||||||||||| |||| |||||    
T  16226086 gatttgttacagattttaagca 16226107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 156 - 375
Target Start/End: Original strand, 47177082 - 47177299
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgaggcaaggtactggaaaa 255  Q
    ||||||||||||||||||||||| ||||||||| |||||| ||   ||||||| ||||||||||| |||||||| ||||||  ||||||  |||||||||    
T  47177082 agagttaacttaaaatcaggttt-ctgcagaatcgtggcacgacgactgggcaacgtggcacgat-ggaggttttagtttttgggcaagacactggaaaa 47177179  T
Q  256 atcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatatttttggatgcagatttgttacaaatttaatgcagat 355  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||| |||| | | ||||    
T  47177180 atcgtggcacgatggggtctcatcgtggcacgatggtgcgctggcggataaaaataaaacctatttttgggagcagatttgttacagattttaagtagat 47177279  T
Q  356 ttgttacaaatttaaagcag 375  Q
    |||||||| |||| ||||||    
T  47177280 ttgttacagattttaagcag 47177299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 156 - 375
Target Start/End: Original strand, 47179432 - 47179650
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgagg-caaggtactggaaa 254  Q
    ||||||||||||||||||||||| ||||||||| |||||| ||  |||||||| ||||||||||| |||||||| ||||||  || ||||| |||| |||    
T  47179432 agagttaacttaaaatcaggttt-ctgcagaatcgtggcacgacggctgggcaacgtggcacgat-ggaggttttagttttttgggcaaggcactgaaaa 47179529  T
Q  255 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatatttttggatgcagatttgttacaaatttaatgcaga 354  Q
    |||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| |||||||||  |||||||||||||| |||| | | |||    
T  47179530 aatcgtggcacgatggggtctcatcgtggcacgatggtgcgcttgcggataaaaataaaacgtatttttgggagcagatttgttacagattttaagtaga 47179629  T
Q  355 tttgttacaaatttaaagcag 375  Q
    ||||||||| |||| ||||||    
T  47179630 tttgttacagattttaagcag 47179650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 256 - 428
Target Start/End: Original strand, 23783362 - 23783523
Alignment:
Q  256 atcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatatttttggatgcagatttgttacaaatttaatgcagat 355  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||           |||||    
T  23783362 atcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatatttttgggagcagatttgtta-----------cagat 23783450  T
Q  356 ttgttacaaatttaaagcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||||| | |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  23783451 ttgttacaaattttaggcagatttgttatagattttaagcaggacttttactataaatatagaccttgtatca 23783523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 156 - 346
Target Start/End: Complemental strand, 10400365 - 10400175
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgaggcaaggtactggaaaa 255  Q
    ||||||||||||||||||||||| |||| |||| |||||| |||||||||||| ||||||||||||||||||||||  |||||||||| | ||||||||     
T  10400365 agagttaacttaaaatcaggttt-ctgcggaatcgtggcacgattgctgggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactggaaat 10400267  T
Q  256 atcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttggatgcagatttgttacaaattt 346  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |  || || | |||| ||||||||| |||||||||||| |||||||    
T  10400266 atcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcagcaaataacataaacgtatttttgggtgcagatttgttccaaattt 10400175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 156 - 346
Target Start/End: Original strand, 51752108 - 51752299
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagtttt--gaggcaaggtactggaa 253  Q
    ||||||||||||||||||||||| ||||||||| |||||| ||| | |||||| ||||||||||| |||||||||||||||  ||||||||| |||||||    
T  51752108 agagttaacttaaaatcaggttt-ctgcagaatcgtggcacgatggttgggcaacgtggcacgat-ggaggtttcagttttttgaggcaaggcactggaa 51752205  T
Q  254 aaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttggatgcagatttgttacaaattt 346  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||  || || | |||| ||||||||| |||||||||||| |||||||    
T  51752206 aaatcgtggcacgatggggccgcatcgtggcacgatggtgcgctggcggcgaataacataaacgtatttttgggtgcagatttgttccaaattt 51752299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 156 - 346
Target Start/End: Original strand, 13761581 - 13761771
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagtttt-gaggcaaggtactggaaa 254  Q
    ||||||||||||||||||||||| ||||||||| |||||| ||| |||||||| ||||||| ||| ||||||||||||||| ||||||||| ||||||||    
T  13761581 agagttaacttaaaatcaggttt-ctgcagaatcgtggcacgatggctgggcaacgtggcatgat-ggaggtttcagtttttgaggcaaggcactggaaa 13761678  T
Q  255 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttggatgcagatttgttacaaattt 346  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||  || || | |||| ||||||||| |||||||||||| |||||||    
T  13761679 aatcgtggcacgatggggtcgcatcgcggcacgatggtgtgctggcggcgaataacagaaacgtatttttgggtgcagatttgttccaaattt 13761771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 156 - 346
Target Start/End: Original strand, 15823290 - 15823480
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcag-aattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgaggcaaggtactggaaa 254  Q
    |||||||||||||||||||| |  |||||| ||| |||||| ||| |||||||| ||||||||||||||||||||||  |||||||||| | ||| ||||    
T  15823290 agagttaacttaaaatcaggat--ctgcaggaatcgtggcacgatggctgggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactagaaa 15823387  T
Q  255 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttggatgcagatttgttacaaattt 346  Q
    ||||||||||||||||||||||||||||||||||||||||||| || |  || || | ||||||||||||||||||||||||||| |||||||    
T  15823388 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctagcagcaaataacagaaacatatttttggatgcagatttgttccaaattt 15823480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 156 - 346
Target Start/End: Original strand, 20302202 - 20302393
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagtttt--gaggcaaggtactggaa 253  Q
    ||||||||||||||||||| ||| ||||||||| | |||||||| ||  |||| ||||||||||| |||||||||||||||  ||||||||| |||||||    
T  20302202 agagttaacttaaaatcagattt-ctgcagaatcgcggcatgatggcaaggcaacgtggcacgat-ggaggtttcagttttttgaggcaaggcactggaa 20302299  T
Q  254 aaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttggatgcagatttgttacaaattt 346  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||  || || | |||||||||||||| |||| ||||||| |||||||    
T  20302300 aaattgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggcgaataacagaaacatatttttgggtgcatatttgttccaaattt 20302393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 156 - 346
Target Start/End: Original strand, 51749782 - 51749973
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagtttt--gaggcaaggtactggaa 253  Q
    |||||||||||||||||| |||| ||||||||| |||||| ||| | |||||| ||||| ||||| |||||||||||||||  ||||||||| |||||||    
T  51749782 agagttaacttaaaatcaagttt-ctgcagaatcgtggcacgatggttgggcaacgtggtacgat-ggaggtttcagttttttgaggcaaggcactggaa 51749879  T
Q  254 aaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttggatgcagatttgttacaaattt 346  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||  || || | |||| ||||||||| |||||||||||| |||||||    
T  51749880 aaatcgtggcacgatggggtcgcatcgtggcacgatagtgcgctggcggcgaataacagaaacgtatttttgggtgcagatttgttccaaattt 51749973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 158 - 346
Target Start/End: Original strand, 28840424 - 28840612
Alignment:
Q  158 agttaacttaaaatcaggttttctgcag-aattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgaggcaaggtactggaaaaa 256  Q
    |||||||||||||||||| |  |||||| ||| |||||| ||| ||  |||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  28840424 agttaacttaaaatcaggat--ctgcaggaatcgtggcacgatggcaaggcaacgtggcacgattggaggtttcagtttttaggcaaggtactggaaaaa 28840521  T
Q  257 tcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttggatgcagatttgttacaaattt 346  Q
    | ||||||||||||| ||||||||||||||||||||| |||||| |  ||||| | |||||||||||||  |||||||||||| |||||||    
T  28840522 ttgtggcacgatgggatcgcatcgtggcacgatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattt 28840612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 172 - 346
Target Start/End: Original strand, 6823643 - 6823818
Alignment:
Q  172 caggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagtttt--gaggcaaggtactggaaaaatcgtggcacgatg 269  Q
    |||||||| ||||||||  ||||| ||| | |||||| ||||||||||| |||||||||||||||  ||||||||| |||||||||||||||||| ||||    
T  6823643 caggtttt-tgcagaatcatggcacgatggttgggcaacgtggcacgat-ggaggtttcagttttttgaggcaaggcactggaaaaatcgtggcatgatg 6823740  T
Q  270 gggtcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttggatgcagatttgttacaaattt 346  Q
    |||||||||||||||||||||||||||||||||  || || | |||| ||||||||| |||||||||||| |||||||    
T  6823741 gggtcgcatcgtggcacgatggtgcgctggcggcgaataacataaacgtatttttgggtgcagatttgttccaaattt 6823818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 210 - 346
Target Start/End: Original strand, 28842290 - 28842427
Alignment:
Q  210 cgtggcacgattggaggtttcagttttgaggcaaggtactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaa 309  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||  ||||| |  |||||    
T  28842290 cgtggcacgattggaggtttcagtttttaggcaaggtactggaaaaatcgtggcacgatgggatcgcatcgtggcacgatggtgtcctggcagcgaaaaa 28842389  T
Q  310 ta-aaacatatttttggatgcagatttgttacaaattt 346  Q
     | |||||||||||||  |||| ||||||| |||||||    
T  28842390 cagaaacatatttttgagtgcaaatttgttccaaattt 28842427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 277 - 374
Target Start/End: Original strand, 16231444 - 16231541
Alignment:
Q  277 atcgtggcacgatggtgcgctggcggataaaaataaaacatatttttggatgcagatttgttacaaatttaatgcagatttgttacaaatttaaagca 374  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| | |||||||||||||| |||| |||||    
T  16231444 atcgtggcacgatggtgcgctggcggataaaaataaaacatatttttgggtgcagatttgttacagattttaagcagatttgttacagattttaagca 16231541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 349 - 428
Target Start/End: Original strand, 16231494 - 16231573
Alignment:
Q  349 tgcagatttgttacaaatttaaagcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16231494 tgcagatttgttacagattttaagcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 16231573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 156 - 270
Target Start/End: Original strand, 6822779 - 6822893
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagtttt--gaggcaaggtactggaa 253  Q
    ||||||||||||||||||||||| ||||||||| |||||| ||| |||||||| ||||||||||| |||||||||||||||  ||||||||| |||||||    
T  6822779 agagttaacttaaaatcaggttt-ctgcagaatcgtggcacgatggctgggcaacgtggcacgat-ggaggtttcagttttttgaggcaaggcactggaa 6822876  T
Q  254 aaatcgtggcacgatgg 270  Q
    |||||||||||||||||    
T  6822877 aaatcgtggcacgatgg 6822893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 349 - 428
Target Start/End: Original strand, 16226060 - 16226139
Alignment:
Q  349 tgcagatttgttacaaatttaaagcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16226060 tgcagatttgttacagattttaagtagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 16226139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 350 - 428
Target Start/End: Original strand, 47177252 - 47177330
Alignment:
Q  350 gcagatttgttacaaatttaaagcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    |||||||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  47177252 gcagatttgttacagattttaagtagatttgttacagattttaagcaggacttttactataaatatagaccttgtatca 47177330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 350 - 428
Target Start/End: Original strand, 47179603 - 47179681
Alignment:
Q  350 gcagatttgttacaaatttaaagcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    |||||||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  47179603 gcagatttgttacagattttaagtagatttgttacagattttaagcaggacttttactataaatatagaccttgtatca 47179681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 157 - 302
Target Start/End: Complemental strand, 3580154 - 3580010
Alignment:
Q  157 gagttaacttaaaatcaggttttctgcag-aattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgaggcaaggtactggaaaa 255  Q
    ||||||||||||||||||||| |  |||| ||| |||||| |||||| ||||| |||| ||| |||||| ||||||||| |||||||||  | |||||||    
T  3580154 gagttaacttaaaatcaggttat--gcaggaatcgtggcacgattgcagggcaacgtgacacaattggatgtttcagttatgaggcaagtcattggaaaa 3580057  T
Q  256 atcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcgg 302  Q
    ||||||| ||| |||| | ||| ||||||||||||||||||||||||    
T  3580056 atcgtggtacggtgggattgcaacgtggcacgatggtgcgctggcgg 3580010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 208 - 346
Target Start/End: Original strand, 41646715 - 41646854
Alignment:
Q  208 atcgtggcacgattggaggtttcagttttgaggcaaggtactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaa 307  Q
    |||||||||||||| ||||||||||||||||||||||  ||||||    |||||||||| |||| | ||| |||||||||||||||| ||||| |  ||     
T  41646715 atcgtggcacgattagaggtttcagttttgaggcaagtcactggatttttcgtggcacggtgggattgcaacgtggcacgatggtgcactggcagcgaat 41646814  T
Q  308 aata-aaacatatttttggatgcagatttgttacaaattt 346  Q
    || | ||||||||||||||||||||||||||| |||||||    
T  41646815 aacagaaacatatttttggatgcagatttgttccaaattt 41646854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 211 - 346
Target Start/End: Complemental strand, 30790877 - 30790741
Alignment:
Q  211 gtggcacgattggaggtttcagttttgaggcaaggtactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaat 310  Q
    |||||||||||||| ||||||||| ||| |||||  |||||||||| |||||||||||||| |||||  |||||||||||||||||||| ||  |||||     
T  30790877 gtggcacgattggatgtttcagttatgaagcaagtcactggaaaaaacgtggcacgatgggatcgcaatgtggcacgatggtgcgctggaggggaaaaac 30790778  T
Q  311 a-aaacatatttttggatgcagatttgttacaaattt 346  Q
    | |||| |||||||   |||||||||||| |||||||    
T  30790777 ataaacgtatttttcagtgcagatttgttccaaattt 30790741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 190 - 346
Target Start/End: Original strand, 13214858 - 13215015
Alignment:
Q  190 gtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgaggcaaggtactggaaaaatcgtggcacgatggggtcgcatcgtggcacgat 289  Q
    |||||| ||| | |||||| |||||||||||||||||||||||||||||||||||  ||||||    |||||||| |||||| | ||| |||||||||||    
T  13214858 gtggcacgatggttgggcaacgtggcacgattggaggtttcagttttgaggcaagtcactggatttttcgtggcatgatgggattgcaacgtggcacgat 13214957  T
Q  290 ggtgcgctggc-ggataaaaataaaacatatttttggatgcagatttgttacaaattt 346  Q
    |||| | |||| | | | ||  ||||| ||||||||| |||||||||||| |||||||    
T  13214958 ggtgtgttggcagcaaataacaaaaacgtatttttgggtgcagatttgttccaaattt 13215015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 208 - 346
Target Start/End: Complemental strand, 28207552 - 28207413
Alignment:
Q  208 atcgtggcacgattggaggtttcagttttgaggcaaggtactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaa 307  Q
    ||||||||||||||||||||||||  |||||||||||  | ||||    || ||||||||||||||| || ||||||||||||||||||||||||  ||     
T  28207552 atcgtggcacgattggaggtttcaactttgaggcaagtcattggatttttcatggcacgatggggtcacaacgtggcacgatggtgcgctggcggcgaat 28207453  T
Q  308 aata-aaacatatttttggatgcagatttgttacaaattt 346  Q
    || | |||| | ||||||| |||||||||||| |||||||    
T  28207452 aacataaacgtttttttgggtgcagatttgttccaaattt 28207413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 156 - 270
Target Start/End: Original strand, 49687305 - 49687418
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgaggcaaggtactggaaaa 255  Q
    |||||||||||||||||||||| | |  | ||| |||||||||| |||||||| |||||||| ||||||||||||||||||||||||||  ||||||       
T  49687305 agagttaacttaaaatcaggttatgtaga-aatcgtggcatgatggctgggcaacgtggcacaattggaggtttcagttttgaggcaagtcactggattt 49687403  T
Q  256 atcgtggcacgatgg 270  Q
     ||||||||||||||    
T  49687404 ttcgtggcacgatgg 49687418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 156 - 297
Target Start/End: Original strand, 39462262 - 39462402
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaatt-gtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgaggcaaggtactggaaa 254  Q
    ||||||||||||||||||||||  |||||||| | ||| ||  || | |||||| |||||||||||| ||||||||||||||||||||||  | ||||      
T  39462262 agagttaacttaaaatcaggtt--ctgcagaaatcgtgacacaatggttgggcaacgtggcacgattagaggtttcagttttgaggcaagtcagtggatt 39462359  T
Q  255 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgct 297  Q
      ||||||||||||||| | |||  ||||||||||||||||||    
T  39462360 tttcgtggcacgatgggattgcaatgtggcacgatggtgcgct 39462402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 156 - 252
Target Start/End: Complemental strand, 38925994 - 38925899
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaatt-gtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgaggcaaggtactgga 252  Q
    ||||||||||||||||||||||  | |||||| | |||| | ||| |||||||| |||||||||||||||||||||||||||||| |||| |||||||    
T  38925994 agagttaacttaaaatcaggtt--ccgcagaaatcgtggtacgatggctgggcaacgtggcacgattggaggtttcagttttgagacaagttactgga 38925899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 156 - 243
Target Start/End: Original strand, 47451409 - 47451495
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaatt-gtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgaggcaa 243  Q
    ||||||||||| ||||||| ||||  |||||| | |||||| ||| ||||||||  |||||||||||||||||||||||||||||||||    
T  47451409 agagttaacttcaaatcagatttt--gcagaaatcgtggcacgatggctgggcaatgtggcacgattggaggtttcagttttgaggcaa 47451495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 372 - 428
Target Start/End: Original strand, 13214997 - 13215053
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || ||||||||| | ||||||||||||||||||||||||||||||    
T  13214997 gcagatttgttccaaattttaagcgatacttttactataaatatagaccttgtatca 13215053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 247 - 323
Target Start/End: Complemental strand, 13449995 - 13449919
Alignment:
Q  247 actggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatattttt 323  Q
    ||||||||||||||| |||||| || ||| |||||| |||||||||||| |||  |||||||||||||| |||||||    
T  13449995 actggaaaaatcgtgccacgattggatcgaatcgtgccacgatggtgcgatggtagataaaaataaaacgtattttt 13449919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 372 - 428
Target Start/End: Original strand, 13761753 - 13761809
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || ||||||||| | ||||||||||||||||||||||||||||||    
T  13761753 gcagatttgttccaaattttaagcgaaacttttactataaatatagaccttgtatca 13761809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 372 - 428
Target Start/End: Original strand, 15823462 - 15823518
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || ||||||||| | ||||||||||||||||||||||||||||||    
T  15823462 gcagatttgttccaaattttaagcgatacttttactataaatatagaccttgtatca 15823518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 372 - 428
Target Start/End: Complemental strand, 28207431 - 28207375
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || ||||||||| | ||||||||||||||||||||||||||||||    
T  28207431 gcagatttgttccaaattttaagcgatacttttactataaatatagaccttgtatca 28207375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 372 - 428
Target Start/End: Original strand, 28840594 - 28840650
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || ||||||||| | ||||||||||||||||||||||||||||||    
T  28840594 gcagatttgttccaaattttaagcgatacttttactataaatatagaccttgtatca 28840650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 372 - 428
Target Start/End: Original strand, 41646836 - 41646892
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || ||||||||| | ||||||||||||||||||||||||||||||    
T  41646836 gcagatttgttccaaattttaagcgatacttttactataaatatagaccttgtatca 41646892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 372 - 428
Target Start/End: Original strand, 51749955 - 51750011
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || ||||||||| | ||||||||||||||||||||||||||||||    
T  51749955 gcagatttgttccaaattttaagcgaaacttttactataaatatagaccttgtatca 51750011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 372 - 428
Target Start/End: Original strand, 51752281 - 51752337
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || ||||||||| | ||||||||||||||||||||||||||||||    
T  51752281 gcagatttgttccaaattttaagcgaaacttttactataaatatagaccttgtatca 51752337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 156 - 258
Target Start/End: Original strand, 20291284 - 20291386
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcag--ttttgaggcaaggtactggaa 253  Q
    |||||||||||||||||| | |||||||||||| |||||| ||| ||  |||| |||||||||  ||||||||||||  |||||||||| || |||||||    
T  20291284 agagttaacttaaaatca-gatttctgcagaatcgtggcacgatggcaaggcaacgtggcacg-gtggaggtttcagttttttgaggcatggcactggaa 20291381  T
Q  254 aaatc 258  Q
    |||||    
T  20291382 aaatc 20291386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 372 - 428
Target Start/End: Complemental strand, 10400193 - 10400137
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || ||||||||| | |||||| |||||||||||||||||||||||    
T  10400193 gcagatttgttccaaattttaagcgaaactttttctataaatatagaccttgtatca 10400137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 372 - 428
Target Start/End: Complemental strand, 30790759 - 30790703
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || ||||||||| | ||||||||||||||||||||| ||||||||    
T  30790759 gcagatttgttccaaattttaagcgatacttttactataaatatagacattgtatca 30790703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 372 - 428
Target Start/End: Complemental strand, 38925843 - 38925787
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    |||||||| || || ||||||||| | ||||||||||||||||||||||||||||||    
T  38925843 gcagatttattccaaattttaagcgatacttttactataaatatagaccttgtatca 38925787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 372 - 428
Target Start/End: Original strand, 39462435 - 39462491
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || |||||||| || ||||| ||||||||||||||||||||||||    
T  39462435 gcagatttgttccaaattttaagtaatactttcactataaatatagaccttgtatca 39462491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 372 - 428
Target Start/End: Original strand, 47451564 - 47451620
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || || |||||| | ||||||||||||||||||||||||||||||    
T  47451564 gcagatttgttccaaatattaagcgatacttttactataaatatagaccttgtatca 47451620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 180 - 270
Target Start/End: Original strand, 16231368 - 16231458
Alignment:
Q  180 ctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgagg-caaggtactggaaaaatcgtggcacgatgg 270  Q
    ||||||||| |||||| ||  |||||||| ||||||||||| |||||||| ||||||  || ||||  ||||||||||||||||||||||||    
T  16231368 ctgcagaatcgtggcacgacggctgggcaacgtggcacgat-ggaggttttagttttttgggcaagacactggaaaaatcgtggcacgatgg 16231458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 376 - 428
Target Start/End: Complemental strand, 3579979 - 3579927
Alignment:
Q  376 atttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||| || ||||||||| | ||||||||| ||||||||||||||||||||    
T  3579979 atttgttccaaattttaagcgatacttttactttaaatatagaccttgtatca 3579927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 372 - 428
Target Start/End: Original strand, 6822931 - 6822987
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || ||||||||| | |||||||||||  |||||||||||||||||    
T  6822931 gcagatttgttccaaattttaagcgaaacttttactatttatatagaccttgtatca 6822987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 372 - 428
Target Start/End: Original strand, 6823800 - 6823856
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || ||||||||| | |||||||||||  |||||||||||||||||    
T  6823800 gcagatttgttccaaattttaagcgaaacttttactatttatatagaccttgtatca 6823856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 236
Target Start/End: Original strand, 23783242 - 23783320
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagtttt 236  Q
    ||||||||||||||||||||||| ||||| ||| |||||| ||  ||||||| ||| |||||||| |||||||| ||||||    
T  23783242 agagttaacttaaaatcaggttt-ctgcacaatcgtggcacgacagctgggcttcgcggcacgat-ggaggttttagtttt 23783320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 376 - 428
Target Start/End: Original strand, 28842413 - 28842465
Alignment:
Q  376 atttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||| || ||||||||| | |||||||||||||||||| |||||||||||    
T  28842413 atttgttccaaattttaagcgatacttttactataaatataaaccttgtatca 28842465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 378 - 428
Target Start/End: Complemental strand, 14098329 - 14098279
Alignment:
Q  378 ttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||| || |||||||| || ||||| ||||||||||||||||||||||||    
T  14098329 ttgttccaaattttaagtaatactttcactataaatatagaccttgtatca 14098279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 399 - 428
Target Start/End: Complemental strand, 2510666 - 2510637
Alignment:
Q  399 acttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||||||||||||||||||    
T  2510666 acttttactataaatatagaccttgtatca 2510637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 399 - 428
Target Start/End: Complemental strand, 9459761 - 9459732
Alignment:
Q  399 acttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||||||||||||||||||    
T  9459761 acttttactataaatatagaccttgtatca 9459732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 399 - 428
Target Start/End: Complemental strand, 9463588 - 9463559
Alignment:
Q  399 acttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||||||||||||||||||    
T  9463588 acttttactataaatatagaccttgtatca 9463559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 399 - 428
Target Start/End: Complemental strand, 12302848 - 12302819
Alignment:
Q  399 acttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||||||||||||||||||    
T  12302848 acttttactataaatatagaccttgtatca 12302819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 399 - 428
Target Start/End: Complemental strand, 18800907 - 18800878
Alignment:
Q  399 acttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||||||||||||||||||    
T  18800907 acttttactataaatatagaccttgtatca 18800878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 389 - 426
Target Start/End: Original strand, 20291390 - 20291427
Alignment:
Q  389 tttaagcaagacttttactataaatatagaccttgtat 426  Q
    ||||||| | ||||||||||||||||||||||||||||    
T  20291390 tttaagcgaaacttttactataaatatagaccttgtat 20291427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 399 - 428
Target Start/End: Original strand, 24325599 - 24325628
Alignment:
Q  399 acttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||||||||||||||||||    
T  24325599 acttttactataaatatagaccttgtatca 24325628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 399 - 428
Target Start/End: Complemental strand, 31735863 - 31735834
Alignment:
Q  399 acttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||||||||||||||||||    
T  31735863 acttttactataaatatagaccttgtatca 31735834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 399 - 428
Target Start/End: Original strand, 43104102 - 43104131
Alignment:
Q  399 acttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||||||||||||||||||    
T  43104102 acttttactataaatatagaccttgtatca 43104131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 399 - 428
Target Start/End: Complemental strand, 46432066 - 46432037
Alignment:
Q  399 acttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||||||||||||||||||    
T  46432066 acttttactataaatatagaccttgtatca 46432037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 399 - 428
Target Start/End: Original strand, 47906207 - 47906236
Alignment:
Q  399 acttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||||||||||||||||||    
T  47906207 acttttactataaatatagaccttgtatca 47906236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 376 - 428
Target Start/End: Original strand, 20302379 - 20302431
Alignment:
Q  376 atttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||| || ||||||||  | ||||||| ||||||||||||||||||||||    
T  20302379 atttgttccaaattttaagtgaaacttttattataaatatagaccttgtatca 20302431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 106; Significance: 7e-53; HSPs: 2)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 156 - 346
Target Start/End: Original strand, 2633 - 2823
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcag-aattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgaggcaaggtactggaaa 254  Q
    |||||||||||||||||| | |  |||||| ||||||| || ||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  2633 agagttaacttaaaatcaagat--ctgcaggaattgtgacacgattgctaggcaacgtggcacgattggaggtttcagttttgaggcaaggtactggaaa 2730  T
Q  255 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttggatgcagatttgttacaaattt 346  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| |  || || | |||| ||||||||| |||||||||||| |||||||    
T  2731 aatcgtggcacgatgggatcgcatcgtggcacgatggtgcgctggcagcgaataacataaacgtatttttgggtgcagatttgttccaaattt 2823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 372 - 428
Target Start/End: Original strand, 2805 - 2861
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || ||||||||| | |||||||||||||||||||| |||||||||    
T  2805 gcagatttgttccaaattttaagcgaaacttttactataaatatagaacttgtatca 2861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 101; Significance: 6e-50; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 156 - 339
Target Start/End: Complemental strand, 13050 - 12868
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgagg-caaggtactggaaa 254  Q
    ||||||||||||||||||||||| ||||||||| |||||| |||  |  |||| ||||||||||| |||||||| ||||||  || ||||| ||||||||    
T  13050 agagttaacttaaaatcaggttt-ctgcagaatcgtggcacgatgtcaaggcaacgtggcacgat-ggaggttttagttttttgggcaaggcactggaaa 12953  T
Q  255 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatatttttggatgcagatttgtta 339  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||||||    
T  12952 aatcgtggcacgatggggtctcatcgtggcacgatggtgcgctggcggataaaaataaaacgtatttttgggagcagatttgtta 12868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 86; Significance: 6e-41; HSPs: 4)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 154 - 346
Target Start/End: Complemental strand, 69831 - 69640
Alignment:
Q  154 taagagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgaggcaaggtactggaa 253  Q
    ||||||||||||||||||||| ||| ||||||||| |||||| ||| ||| |||| ||||||||||||||||||||||  |||||||||| | |||||||    
T  69831 taagagttaacttaaaatcagattt-ctgcagaatcgtggcacgatggctaggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactggaa 69733  T
Q  254 aaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttggatgcagatttgttacaaattt 346  Q
    ||||||| |||| ||||| ||||||||| ||||||||||| |||||| |  ||||| | ||||||| |||||| |||||||||||| |||||||    
T  69732 aaatcgtagcacaatgggatcgcatcgttgcacgatggtgtgctggcagcgaaaaacagaaacata-ttttgggtgcagatttgttccaaattt 69640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 154 - 270
Target Start/End: Complemental strand, 73542 - 73427
Alignment:
Q  154 taagagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgaggcaaggtactggaa 253  Q
    ||||||||||||||||||||| |||  |||||||| |||||| ||| ||| |||| ||||||||||||||||||||||  |||||||||| | |||||||    
T  73542 taagagttaacttaaaatcagattta-tgcagaatcgtggcacgatggctaggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactggaa 73444  T
Q  254 aaatcgtggcacgatgg 270  Q
    |||| ||||||||||||    
T  73443 aaattgtggcacgatgg 73427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 372 - 428
Target Start/End: Complemental strand, 69658 - 69602
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || ||||||||| | |||||||| ||||||||||||||| |||||    
T  69658 gcagatttgttccaaattttaagcgatacttttacaataaatatagaccttatatca 69602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 372 - 428
Target Start/End: Complemental strand, 73390 - 73334
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || ||||||||  | |||||||||||||||||||||| |||||||    
T  73390 gcagatttgttccaaattttaagagatacttttactataaatatagaccgtgtatca 73334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 69; Significance: 8e-31; HSPs: 2)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 156 - 346
Target Start/End: Original strand, 14771 - 14962
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcag-aattgtggcatgattgctgggcatcgtggcacgattggaggtttcagttttgaggcaaggtactggaaa 254  Q
    |||||||||||||||||||| || |||||| ||| |||||| |||||  ||||| ||||| ||||| ||| ||||||||| |||||||||  ||||||||    
T  14771 agagttaacttaaaatcaggatt-ctgcaggaatcgtggcacgattgaagggcaacgtggaacgatgggaagtttcagttatgaggcaagtcactggaaa 14869  T
Q  255 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttggatgcagatttgttacaaattt 346  Q
      ||||||||||||||| || || |||| ||||||||||||||||| |  || || | |||||||||||||| |||||||||||| |||||||    
T  14870 tttcgtggcacgatgggatcacaacgtgacacgatggtgcgctggcagcgaataacagaaacatatttttgggtgcagatttgttccaaattt 14962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 372 - 428
Target Start/End: Original strand, 14944 - 15000
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || ||||||||| | ||||||||||||||||||||||||||||||    
T  14944 gcagatttgttccaaattttaagcgatacttttactataaatatagaccttgtatca 15000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 69; Significance: 8e-31; HSPs: 3)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 247 - 346
Target Start/End: Original strand, 29004 - 29104
Alignment:
Q  247 actggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttggatgcagatttgttacaaatt 345  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |  ||||| | |||||||||||||  |||||||||||||||||||    
T  29004 actggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttacaaatt 29103  T
Q  346 t 346  Q
    |    
T  29104 t 29104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 372 - 428
Target Start/End: Original strand, 29086 - 29142
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  29086 gcagatttgttacaaattttaagcaaaacttttactataaatatagaccttgtatca 29142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 156 - 217
Target Start/End: Original strand, 28945 - 29005
Alignment:
Q  156 agagttaacttaaaatcaggttttctgcagaattgtggcatgattgctgggcatcgtggcac 217  Q
    ||||||||||||||||||||||| ||||||||| |||||| ||| |||||||| ||||||||    
T  28945 agagttaacttaaaatcaggttt-ctgcagaatcgtggcacgatggctgggcaacgtggcac 29005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0339 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 372 - 428
Target Start/End: Original strand, 3922 - 3978
Alignment:
Q  372 gcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatca 428  Q
    ||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||    
T  3922 gcagatttgtttcaaattttaagcaatacttttactataaatatagaccttgtatca 3978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 399 - 428
Target Start/End: Original strand, 51961 - 51990
Alignment:
Q  399 acttttactataaatatagaccttgtatca 428  Q
    ||||||||||||||||||||||||||||||    
T  51961 acttttactataaatatagaccttgtatca 51990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 247 - 323
Target Start/End: Complemental strand, 41929 - 41853
Alignment:
Q  247 actggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaataaaacatattttt 323  Q
    ||||||||||||||| |||||| |  ||| |||||| |||||| ||||| | |  |||||||||||||| |||||||    
T  41929 actggaaaaatcgtgccacgattgtatcgaatcgtgccacgatagtgcgattgaagataaaaataaaacgtattttt 41853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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