View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8528_low_17 (Length: 309)

Name: NF8528_low_17
Description: NF8528
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8528_low_17
NF8528_low_17
[»] chr1 (9 HSPs)
chr1 (24-303)||(17408538-17408817)
chr1 (214-268)||(25934653-25934707)
chr1 (214-295)||(9828081-9828162)
chr1 (214-294)||(16164257-16164337)
chr1 (214-262)||(34371750-34371798)
chr1 (253-303)||(43112999-43113049)
chr1 (235-268)||(12918992-12919025)
chr1 (144-193)||(29856773-29856822)
chr1 (220-268)||(41597449-41597497)
[»] chr6 (10 HSPs)
chr6 (214-303)||(10294144-10294233)
chr6 (214-268)||(18367873-18367927)
chr6 (214-264)||(16488562-16488612)
chr6 (236-303)||(24645529-24645596)
chr6 (248-295)||(34595194-34595241)
chr6 (214-268)||(8365487-8365541)
chr6 (222-303)||(23130405-23130486)
chr6 (226-271)||(25038036-25038081)
chr6 (214-262)||(9195728-9195776)
chr6 (213-273)||(11352397-11352457)
[»] chr3 (6 HSPs)
chr3 (214-303)||(17005552-17005641)
chr3 (214-265)||(11665981-11666032)
chr3 (214-268)||(41961618-41961672)
chr3 (214-303)||(8039768-8039857)
chr3 (214-283)||(14832136-14832205)
chr3 (245-294)||(16192675-16192724)
[»] scaffold0036 (1 HSPs)
scaffold0036 (214-267)||(9716-9769)
[»] chr4 (11 HSPs)
chr4 (214-295)||(30982819-30982900)
chr4 (214-284)||(22234842-22234912)
chr4 (214-266)||(46083961-46084013)
chr4 (237-303)||(47264046-47264112)
chr4 (225-273)||(24613664-24613712)
chr4 (248-295)||(3947713-3947760)
chr4 (214-268)||(5414140-5414194)
chr4 (250-295)||(28000682-28000727)
chr4 (214-294)||(19482705-19482785)
chr4 (235-303)||(30103301-30103369)
chr4 (216-268)||(44132612-44132664)
[»] chr7 (9 HSPs)
chr7 (214-294)||(6630854-6630934)
chr7 (214-257)||(15902859-15902902)
chr7 (214-304)||(4008496-4008586)
chr7 (214-304)||(4013888-4013978)
chr7 (222-294)||(11072341-11072413)
chr7 (214-262)||(26329356-26329404)
chr7 (214-267)||(25822692-25822745)
chr7 (129-193)||(39732896-39732960)
chr7 (129-193)||(39839998-39840062)
[»] chr2 (8 HSPs)
chr2 (214-268)||(28524463-28524517)
chr2 (214-268)||(34784950-34785004)
chr2 (214-268)||(35056905-35056959)
chr2 (214-283)||(44860357-44860426)
chr2 (214-268)||(36096343-36096397)
chr2 (214-295)||(11223805-11223885)
chr2 (214-295)||(26769548-26769629)
chr2 (235-303)||(20242671-20242739)
[»] chr8 (9 HSPs)
chr8 (214-295)||(12570450-12570530)
chr8 (214-295)||(12570676-12570756)
chr8 (248-303)||(8343387-8343442)
chr8 (214-269)||(29447481-29447536)
chr8 (214-256)||(11927066-11927108)
chr8 (214-284)||(15816081-15816151)
chr8 (214-295)||(26902116-26902197)
chr8 (213-261)||(4122224-4122272)
chr8 (214-294)||(11944702-11944782)
[»] chr5 (7 HSPs)
chr5 (216-268)||(30183588-30183640)
chr5 (214-268)||(6401535-6401589)
chr5 (214-264)||(21814298-21814348)
chr5 (214-295)||(32766884-32766965)
chr5 (248-294)||(26312829-26312875)
chr5 (214-267)||(18592110-18592163)
chr5 (248-284)||(30098397-30098433)
[»] scaffold0003 (2 HSPs)
scaffold0003 (214-284)||(241631-241701)
scaffold0003 (257-303)||(236918-236964)
[»] scaffold0122 (1 HSPs)
scaffold0122 (257-294)||(7585-7622)
[»] scaffold0623 (1 HSPs)
scaffold0623 (214-268)||(5964-6018)
[»] scaffold0008 (1 HSPs)
scaffold0008 (214-295)||(263313-263394)


Alignment Details
Target: chr1 (Bit Score: 260; Significance: 1e-145; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 24 - 303
Target Start/End: Original strand, 17408538 - 17408817
Alignment:
Q  24 ttagatatcggagcacttgagaaagttagatctggtgaaattaaagttgttcctggaataaagagattttcacaagggaaagttgaacttgttgatggaa 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  17408538 ttagatatcggagcacttgagaaagttagatctggtgaaattaaagttgtttctggaataaagagattttcacaagggaaagttgaacttgttgatggaa 17408637  T
Q  124 aagttcttgatattgattctgttgttcttgctactggctatagaagcaatgtaccatcttggcttaaggttagtttgtttagtccttctttgtaattata 223  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17408638 aagttcttgatattgattctgttgttcttgctactggctatagaagcaatgtaccatcttggcttaaggttagtttgtttagtccttctttgtaattata 17408737  T
Q  224 tgtgtcggtgttgtgttggtatcagacacgacacgtgtctgacaccaggatacacctaatctgaagagtgtctctgcttc 303  Q
    | ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||    
T  17408738 tatgtcggtgttgtgttggtatcagacacgacacgtgtccgacaccaagatacacctaatctgaagagtgtctgtgcttc 17408817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 268
Target Start/End: Original strand, 25934653 - 25934707
Alignment:
Q  214 tgtaattatatgtgtcggtgttgtgttggtatcagacacgacacgtgtctgacac 268  Q
    ||||||||||||||||||| | |||| ||| || |||||||||||||||||||||    
T  25934653 tgtaattatatgtgtcggtatcgtgtcggtgtcggacacgacacgtgtctgacac 25934707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 214 - 295
Target Start/End: Original strand, 9828081 - 9828162
Alignment:
Q  214 tgtaattatatgtgtcggtgttgtgttggtatcagacacgacacgtgtctgacaccaggatacacctaatctgaagagtgtc 295  Q
    ||||||| ||||||||||||| ||||  || |||||||||||||||||| |||||| ||| ||  |||||| || |||||||    
T  9828081 tgtaattttatgtgtcggtgtcgtgtccgtgtcagacacgacacgtgtccgacaccgggacacgtctaatccgaggagtgtc 9828162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 294
Target Start/End: Complemental strand, 16164337 - 16164257
Alignment:
Q  214 tgtaattatatgtgtcggtgttgtgttggtatcagacacgacacgtgtctgacaccaggatacacctaatctgaagagtgt 294  Q
    ||||||||||||||||  ||| |||||||| |  ||| | ||||||||| |||||||||| || ||||||| |||||||||    
T  16164337 tgtaattatatgtgtcattgtcgtgttggtgttggacgcaacacgtgtccgacaccaggacacgcctaatccgaagagtgt 16164257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 262
Target Start/End: Original strand, 34371750 - 34371798
Alignment:
Q  214 tgtaattatatgtgtcggtgttgtgttggtatcagacacgacacgtgtc 262  Q
    ||||||||||||||||||||| |||||||| || || ||||||||||||    
T  34371750 tgtaattatatgtgtcggtgtcgtgttggtgtcggatacgacacgtgtc 34371798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 303
Target Start/End: Original strand, 43112999 - 43113049
Alignment:
Q  253 gacacgtgtctgacaccaggatacacctaatctgaagagtgtctctgcttc 303  Q
    |||| |||||||||||| ||| ||||||||||||||||| |||| ||||||    
T  43112999 gacatgtgtctgacaccgggacacacctaatctgaagagagtctgtgcttc 43113049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 268
Target Start/End: Original strand, 12918992 - 12919025
Alignment:
Q  235 tgtgttggtatcagacacgacacgtgtctgacac 268  Q
    |||||||||||| |||||||||||||||||||||    
T  12918992 tgtgttggtatcggacacgacacgtgtctgacac 12919025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 193
Target Start/End: Complemental strand, 29856822 - 29856773
Alignment:
Q  144 gttgttcttgctactggctatagaagcaatgtaccatcttggcttaaggt 193  Q
    ||||||||||||||||| ||| | |||||||| || ||||||||||||||    
T  29856822 gttgttcttgctactggatatcgtagcaatgtcccttcttggcttaaggt 29856773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 268
Target Start/End: Complemental strand, 41597497 - 41597449
Alignment:
Q  220 tatatgtgtcggtgttgtgttggtatcagacacgacacgtgtctgacac 268  Q
    ||||||||| ||||||||||  || || |||||||||||||||||||||    
T  41597497 tatatgtgttggtgttgtgtccgtgtcggacacgacacgtgtctgacac 41597449  T

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Target: chr6 (Bit Score: 46; Significance: 3e-17; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 214 - 303
Target Start/End: Original strand, 10294144 - 10294233
Alignment:
Q  214 tgtaattatatgtgtcggtgttgtgttggtatcagacacgacacgtgtctgacaccaggatacacctaatctgaagagtgtctctgcttc 303  Q
    ||||||||||||||||||||| |||||||| || ||||||||| ||||| || || |||| ||| ||||||||| |||||||| ||||||    
T  10294144 tgtaattatatgtgtcggtgtcgtgttggtgtcggacacgacatgtgtccgaaactaggacacagctaatctgaggagtgtctgtgcttc 10294233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 214 - 268
Target Start/End: Original strand, 18367873 - 18367927
Alignment:
Q  214 tgtaattatatgtgtcggtgttgtgttggtatcagacacgacacgtgtctgacac 268  Q
    ||||||||||||||||||||| |||| ||| ||||||||||||| ||||||||||    
T  18367873 tgtaattatatgtgtcggtgtcgtgtcggtgtcagacacgacacatgtctgacac 18367927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 264
Target Start/End: Complemental strand, 16488612 - 16488562
Alignment:
Q  214 tgtaattatatgtgtcggtgttgtgttggtatcagacacgacacgtgtctg 264  Q
    ||||||||||||||||||||| |||| ||| || |||||||||||||||||    
T  16488612 tgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgacacgtgtctg 16488562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 236 - 303
Target Start/End: Original strand, 24645529 - 24645596
Alignment:
Q  236 gtgttggtatcagacacgacacgtgtctgacaccaggatacacctaatctgaagagtgtctctgcttc 303  Q
    |||| ||| |||||||||||||||||| ||||||| || ||  |||||| ||||||||||| ||||||    
T  24645529 gtgtcggtgtcagacacgacacgtgtccgacaccaagacacgtctaatccgaagagtgtctgtgcttc 24645596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 295
Target Start/End: Original strand, 34595194 - 34595241
Alignment:
Q  248 gacacgacacgtgtctgacaccaggatacacctaatctgaagagtgtc 295  Q
    |||||||||||||||||||||| ||| |||||||||| || |||||||    
T  34595194 gacacgacacgtgtctgacaccgggacacacctaatccgaggagtgtc 34595241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 268
Target Start/End: Complemental strand, 8365541 - 8365487
Alignment:
Q  214 tgtaattatatgtgtcggtgttgtgttggtatcagacacgacacgtgtctgacac 268  Q
    |||||||| | |||||||||| |||| |||||| ||||||||||||||| |||||    
T  8365541 tgtaattacaagtgtcggtgtcgtgtcggtatcggacacgacacgtgtccgacac 8365487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 303
Target Start/End: Complemental strand, 23130486 - 23130405
Alignment:
Q  222 tatgtgtcggtgttgtgttggtatcagacacgacacgtgtctgacaccaggatacacctaatctgaagagtgtctctgcttc 303  Q
    |||||||| ||||  ||||||| ||||||||||||||||||||| | | ||| |  |||||||||| |||||| | ||||||    
T  23130486 tatgtgtcagtgtcatgttggtgtcagacacgacacgtgtctgatatcgggacatgcctaatctgaggagtgtatgtgcttc 23130405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 271
Target Start/End: Complemental strand, 25038081 - 25038036
Alignment:
Q  226 tgtcggtgttgtgttggtatcagacacgacacgtgtctgacaccag 271  Q
    ||||||| |||||||||| || ||||||||||||||| ||||||||    
T  25038081 tgtcggtattgtgttggtgtccgacacgacacgtgtccgacaccag 25038036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 262
Target Start/End: Complemental strand, 9195776 - 9195728
Alignment:
Q  214 tgtaattatatgtgtcggtgttgtgttggtatcagacacgacacgtgtc 262  Q
    ||||||||||||||||||||| |||| ||| || ||||||||| |||||    
T  9195776 tgtaattatatgtgtcggtgtcgtgtaggtgtctgacacgacatgtgtc 9195728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 273
Target Start/End: Original strand, 11352397 - 11352457
Alignment:
Q  213 ttgtaattatatgtgtcggtgttgtgttggtatcagacacgacacgtgtctgacaccagga 273  Q
    |||||||||||||| ||  ||| |||| |||||||||||| ||||||||| |||| |||||    
T  11352397 ttgtaattatatgtatcaatgtcgtgtcggtatcagacacaacacgtgtccgacatcagga 11352457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 3e-17; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 214 - 303
Target Start/End: Complemental strand, 17005641 - 17005552
Alignment:
Q  214 tgtaattatatgtgtcggtgttgtgttggtatcagacacgacacgtgtctgacaccaggatacacctaatctgaagagtgtctctgcttc 303  Q
    |||||||||| ||||||||||||||||||| |||||||  |||||||||||||||||||| ||  |||||| || |||||| | ||||||    
T  17005641 tgtaattataagtgtcggtgttgtgttggtgtcagacataacacgtgtctgacaccaggacacctctaatccgaggagtgtttgtgcttc 17005552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 214 - 265
Target Start/End: Original strand, 11665981 - 11666032
Alignment:
Q  214 tgtaattatatgtgtcggtgttgtgttggtatcagacacgacacgtgtctga 265  Q
    ||||||||||||||||||||| |||||| | | |||||||||||||||||||    
T  11665981 tgtaattatatgtgtcggtgtcgtgttgatgttagacacgacacgtgtctga 11666032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 268
Target Start/End: Complemental strand, 41961672 - 41961618
Alignment:
Q  214 tgtaattatatgtgtcggtgttgtgttggtatcagacacgacacgtgtctgacac 268  Q
    |||||||| | |||||||||| |||| |||||| ||||||||||||||| |||||    
T  41961672 tgtaattacaagtgtcggtgtcgtgtcggtatcggacacgacacgtgtccgacac 41961618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 303
Target Start/End: Complemental strand, 8039857 - 8039768
Alignment:
Q  214 tgtaattatatgtgtcggtgttgtgttggtatcagacacgacacgtgtctgacaccaggatacacctaatctgaagagtgtctctgcttc 303  Q
    ||||||||||||||||||||| |||| ||| || |||| || || |||| |||||| ||| || | ||||| ||||||| ||| ||||||    
T  8039857 tgtaattatatgtgtcggtgtcgtgtcggtgtcggacatgagacatgtccgacaccgggacacgcttaatccgaagagtatctgtgcttc 8039768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 283
Target Start/End: Original strand, 14832136 - 14832205
Alignment:
Q  214 tgtaattatatgtgtcggtgttgtgttggtatcagacacgacacgtgtctgacaccaggatacacctaat 283  Q
    |||||||| | ||||| |||| |||| |||||| ||||||||||||||| |||||| ||| || ||||||    
T  14832136 tgtaattacaagtgtcagtgtcgtgtcggtatcggacacgacacgtgtccgacaccgggacacgcctaat 14832205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 294
Target Start/End: Complemental strand, 16192724 - 16192675
Alignment:
Q  245 tcagacacgacacgtgtctgacaccaggatacacctaatctgaagagtgt 294  Q
    ||||||||||||||||||||||||| ||| | ||||||| ||| ||||||    
T  16192724 tcagacacgacacgtgtctgacaccgggacatacctaatatgaggagtgt 16192675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 214 - 267
Target Start/End: Complemental strand, 9769 - 9716
Alignment:
Q  214 tgtaattatatgtgtcggtgttgtgttggtatcagacacgacacgtgtctgaca 267  Q
    ||||||||||||||||||||| |||||||| ||||||||||||| |||||||||    
T  9769 tgtaattatatgtgtcggtgtcgtgttggtgtcagacacgacacttgtctgaca 9716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 214 - 295
Target Start/End: Complemental strand, 30982900 - 30982819
Alignment:
Q  214 tgtaattatatgtgtcggtgttgtgttggtatcagacacgacacgtgtctgacaccaggatacacctaatctgaagagtgtc 295  Q
    |||||||||| |||||||||| |||| ||| |||||||||||||||||| |||||| ||| || |||||||  |||||||||    
T  30982900 tgtaattataagtgtcggtgtcgtgtcggtgtcagacacgacacgtgtccgacaccgggacacgcctaatccaaagagtgtc 30982819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 214 - 284
Target Start/End: Complemental strand, 22234912 - 22234842
Alignment:
Q  214 tgtaattatatgtgtcggtgttgtgttggtatcagacacgacacgtgtctgacaccaggatacacctaatc 284  Q
    ||||||| ||||||||||||| |||| ||| || ||||||||||||||| |||||||||| ||| ||||||    
T  22234912 tgtaattctatgtgtcggtgtcgtgtcggtgtctgacacgacacgtgtccgacaccaggacacagctaatc 22234842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 214 - 266
Target Start/End: Complemental strand, 46084013 - 46083961
Alignment:
Q  214 tgtaattatatgtgtcggtgttgtgttggtatcagacacgacacgtgtctgac 266  Q
    ||||||||||||||||||||| ||||  ||||| |||||||||||||||||||    
T  46084013 tgtaattatatgtgtcggtgtcgtgtcagtatcggacacgacacgtgtctgac 46083961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 237 - 303
Target Start/End: Original strand, 47264046 - 47264112
Alignment:
Q  237 tgttggtatcagacacgacacgtgtctgacaccaggatacacctaatctgaagagtgtctctgcttc 303  Q
    ||||||| ||||| ||||||| ||||||||||||||| || ||||||| |||||| |||| ||||||    
T  47264046 tgttggtgtcagatacgacacatgtctgacaccaggacacgcctaatccgaagagcgtctgtgcttc 47264112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 273
Target Start/End: Complemental strand, 24613712 - 24613664
Alignment:
Q  225 gtgtcggtgttgtgttggtatcagacacgacacgtgtctgacaccagga 273  Q
    ||||||||||  ||| ||| |||||||||||||||||||||||||||||    
T  24613712 gtgtcggtgtcatgtcggtgtcagacacgacacgtgtctgacaccagga 24613664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 295
Target Start/End: Complemental strand, 3947760 - 3947713
Alignment:
Q  248 gacacgacacgtgtctgacaccaggatacacctaatctgaagagtgtc 295  Q
    ||||||||||||||| |||||||||| |||||||||| || |||||||    
T  3947760 gacacgacacgtgtccgacaccaggacacacctaatccgaggagtgtc 3947713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 268
Target Start/End: Complemental strand, 5414194 - 5414140
Alignment:
Q  214 tgtaattatatgtgtcggtgttgtgttggtatcagacacgacacgtgtctgacac 268  Q
    ||||||||||||| ||||||| ||||  || || |||||||||||||||||||||    
T  5414194 tgtaattatatgtatcggtgtcgtgtcagtgtcggacacgacacgtgtctgacac 5414140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 295
Target Start/End: Complemental strand, 28000727 - 28000682
Alignment:
Q  250 cacgacacgtgtctgacaccaggatacacctaatctgaagagtgtc 295  Q
    ||||||||||||||||||||  || ||||||||||||| |||||||    
T  28000727 cacgacacgtgtctgacaccgagacacacctaatctgatgagtgtc 28000682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 294
Target Start/End: Original strand, 19482705 - 19482785
Alignment:
Q  214 tgtaattatatgtgtcggtgttgtgttggtatcagacacgacacgtgtctgacaccaggatacacctaatctgaagagtgt 294  Q
    |||||||| | |||| ||||| |||| |||||  ||||||||||||||| |||||  ||| |||||||||| || ||||||    
T  19482705 tgtaattacaagtgttggtgtcgtgtcggtattggacacgacacgtgtccgacactgggacacacctaatccgaggagtgt 19482785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 303
Target Start/End: Complemental strand, 30103369 - 30103301
Alignment:
Q  235 tgtgttggtatcagacacgacacgtgtctgacaccaggatacacctaatctgaagagtgtctctgcttc 303  Q
    ||||| ||| ||| ||||||||  ||||||||| ||||| ||| |||||| || |||||||||||||||    
T  30103369 tgtgtcggtgtcaaacacgacatatgtctgacatcaggacacatctaatccgaggagtgtctctgcttc 30103301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 268
Target Start/End: Complemental strand, 44132664 - 44132612
Alignment:
Q  216 taattatatgtgtcggtgttgtgttggtatcagacacgacacgtgtctgacac 268  Q
    ||||||||||||||||||| |||||||| ||  |||| ||| |||||||||||    
T  44132664 taattatatgtgtcggtgtcgtgttggtgtcgaacacaacatgtgtctgacac 44132612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 214 - 294
Target Start/End: Complemental strand, 6630934 - 6630854
Alignment:
Q  214 tgtaattatatgtgtcggtgttgtgttggtatcagacacgacacgtgtctgacaccaggatacacctaatctgaagagtgt 294  Q
    ||||||||||||||||| ||| |||||||| || ||||| ||||||| | ||||||| || ||||||||||||| ||||||    
T  6630934 tgtaattatatgtgtcgatgtcgtgttggtgtcggacacaacacgtgcccgacaccaagacacacctaatctgaggagtgt 6630854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 214 - 257
Target Start/End: Original strand, 15902859 - 15902902
Alignment:
Q  214 tgtaattatatgtgtcggtgttgtgttggtatcagacacgacac 257  Q
    |||||||||||||||||||||||||| |||||| ||||||||||    
T  15902859 tgtaattatatgtgtcggtgttgtgtcggtatcggacacgacac 15902902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 304
Target Start/End: Complemental strand, 4008586 - 4008496
Alignment:
Q  214 tgtaattatatgtgtcggtgttgtgttggtatcagacacgacacgtgtctgacaccaggatacacctaatctgaagagtgtctctgcttct 304  Q
    ||||||| ||||||||||| |||| | | | || |||||| |||||||| ||| |||||||||||||||||||| ||| || | |||||||    
T  4008586 tgtaattgtatgtgtcggtattgtatcgatgtccgacacggcacgtgtccgacgccaggatacacctaatctgaggagagtatgtgcttct 4008496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 304
Target Start/End: Complemental strand, 4013978 - 4013888
Alignment:
Q  214 tgtaattatatgtgtcggtgttgtgttggtatcagacacgacacgtgtctgacaccaggatacacctaatctgaagagtgtctctgcttct 304  Q
    ||||||| ||||||||||| |||| | | | || |||||| |||||||| ||| |||||||||||||||||||| ||| || | |||||||    
T  4013978 tgtaattgtatgtgtcggtattgtatcgatgtccgacacggcacgtgtccgacgccaggatacacctaatctgaggagagtatgtgcttct 4013888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 294
Target Start/End: Original strand, 11072341 - 11072413
Alignment:
Q  222 tatgtgtcggtgttgtgttggtatcagacacgacacgtgtctgacaccaggatacacctaatctgaagagtgt 294  Q
    ||||||||||||| |||| |||||| ||||||| || || |  ||||| | ||||||||||||||||||||||    
T  11072341 tatgtgtcggtgtcgtgtcggtatctgacacgatacatgaccaacaccggaatacacctaatctgaagagtgt 11072413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 262
Target Start/End: Complemental strand, 26329404 - 26329356
Alignment:
Q  214 tgtaattatatgtgtcggtgttgtgttggtatcagacacgacacgtgtc 262  Q
    |||||||||||||||||| || |||| ||| ||||||||||||||||||    
T  26329404 tgtaattatatgtgtcggcgtcgtgtcggtgtcagacacgacacgtgtc 26329356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 267
Target Start/End: Original strand, 25822692 - 25822745
Alignment:
Q  214 tgtaattatatgtgtcggtgttgtgttggtatcagacacgacacgtgtctgaca 267  Q
    |||||||| | |||||||||| || | |||||| ||||||||||||||||||||    
T  25822692 tgtaattacaagtgtcggtgtcgtatcggtatcggacacgacacgtgtctgaca 25822745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 193
Target Start/End: Complemental strand, 39732960 - 39732896
Alignment:
Q  129 cttgatattgattctgttgttcttgctactggctatagaagcaatgtaccatcttggcttaaggt 193  Q
    |||||||||||| | ||||||||||||||||| ||  | |||||||| || ||||||||| ||||    
T  39732960 cttgatattgatgcagttgttcttgctactggttaccgcagcaatgtcccttcttggcttcaggt 39732896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 193
Target Start/End: Original strand, 39839998 - 39840062
Alignment:
Q  129 cttgatattgattctgttgttcttgctactggctatagaagcaatgtaccatcttggcttaaggt 193  Q
    |||||||||||| | ||||||||||||||||| ||  | |||||||| || ||||||||| ||||    
T  39839998 cttgatattgatgcagttgttcttgctactggttaccgcagcaatgtcccttcttggcttcaggt 39840062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 8)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 214 - 268
Target Start/End: Original strand, 28524463 - 28524517
Alignment:
Q  214 tgtaattatatgtgtcggtgttgtgttggtatcagacacgacacgtgtctgacac 268  Q
    ||||||||||||||||| |||||||||||| || ||||| |||||||||||||||    
T  28524463 tgtaattatatgtgtcgttgttgtgttggtgtcggacacaacacgtgtctgacac 28524517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 214 - 268
Target Start/End: Complemental strand, 34785004 - 34784950
Alignment:
Q  214 tgtaattatatgtgtcggtgttgtgttggtatcagacacgacacgtgtctgacac 268  Q
    ||||||||||||||||||||| |||| |||||| |||||||||| ||||||||||    
T  34785004 tgtaattatatgtgtcggtgtcgtgtcggtatcggacacgacacctgtctgacac 34784950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 268
Target Start/End: Original strand, 35056905 - 35056959
Alignment:
Q  214 tgtaattatatgtgtcggtgttgtgttggtatcagacacgacacgtgtctgacac 268  Q
    ||||||||||||||||||||| |||| ||| || ||||||||||||||| |||||    
T  35056905 tgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgacacgtgtccgacac 35056959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 214 - 283
Target Start/End: Original strand, 44860357 - 44860426
Alignment:
Q  214 tgtaattatatgtgtcggtgttgtgttggtatcagacacgacacgtgtctgacaccaggatacacctaat 283  Q
    ||||||||||||||||||||| |||||||| |  ||||||||| ||||| |||| | ||| |||||||||    
T  44860357 tgtaattatatgtgtcggtgtcgtgttggtgttggacacgacatgtgtccgacatcgggacacacctaat 44860426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 268
Target Start/End: Complemental strand, 36096397 - 36096343
Alignment:
Q  214 tgtaattatatgtgtcggtgttgtgttggtatcagacacgacacgtgtctgacac 268  Q
    ||||||||||| ||||||||| |||| | | || |||||||||||||||||||||    
T  36096397 tgtaattatatttgtcggtgtcgtgtcgatgtcggacacgacacgtgtctgacac 36096343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 295
Target Start/End: Complemental strand, 11223885 - 11223805
Alignment:
Q  214 tgtaattatatgtgtcggtgttgtgttggtatcagacacgacacgtgtctgacaccaggatacacctaatctgaagagtgtc 295  Q
    |||||||| | ||||||||||  ||| ||| || |||||||||| ||||||||||| ||| || |||||||||| |||||||    
T  11223885 tgtaattacaagtgtcggtgtcatgtaggtgtcggacacgacac-tgtctgacaccgggacacgcctaatctgaggagtgtc 11223805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 295
Target Start/End: Original strand, 26769548 - 26769629
Alignment:
Q  214 tgtaattatatgtgtcggtgttgtgttggtatcagacacgacacgtgtctgacaccaggatacacctaatctgaagagtgtc 295  Q
    |||||||| | ||||||||||  ||| |||||| ||||||||||||||| |||||  ||| || ||||||| || |||||||    
T  26769548 tgtaattacaagtgtcggtgtcatgtcggtatcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtgtc 26769629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 303
Target Start/End: Complemental strand, 20242739 - 20242671
Alignment:
Q  235 tgtgttggtatcagacacgacacgtgtctgacaccaggatacacctaatctgaagagtgtctctgcttc 303  Q
    ||||| ||| || ||||| ||||||||||||||| |||| || ||| ||| ||||||||||| ||||||    
T  20242739 tgtgtcggtgtcggacacaacacgtgtctgacacgaggacacgccttatccgaagagtgtctgtgcttc 20242671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000002; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 214 - 295
Target Start/End: Complemental strand, 12570530 - 12570450
Alignment:
Q  214 tgtaattatatgtgtcggtgttgtgttggtatcagacacgacacgtgtctgacaccaggatacacctaatctgaagagtgtc 295  Q
    ||||||||||||||||| ||| || | ||| |||||||| ||||||||| |||||||||| || ||||||||||||| ||||    
T  12570530 tgtaattatatgtgtcgatgt-gtatcggtgtcagacactacacgtgtccgacaccaggacacgcctaatctgaagattgtc 12570450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 214 - 295
Target Start/End: Complemental strand, 12570756 - 12570676
Alignment:
Q  214 tgtaattatatgtgtcggtgttgtgttggtatcagacacgacacgtgtctgacaccaggatacacctaatctgaagagtgtc 295  Q
    ||||||||||| ||| ||||| || | ||| |||||||| ||||||||| |||||||||| || ||||||||||||| ||||    
T  12570756 tgtaattatatatgttggtgt-gtatcggtgtcagacactacacgtgtccgacaccaggacacgcctaatctgaagattgtc 12570676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 303
Target Start/End: Original strand, 8343387 - 8343442
Alignment:
Q  248 gacacgacacgtgtctgacaccaggatacacctaatctgaagagtgtctctgcttc 303  Q
    ||||||||||||||| |||||| ||| || ||||||| ||||||||||| ||||||    
T  8343387 gacacgacacgtgtccgacaccgggacacgcctaatccgaagagtgtctgtgcttc 8343442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 214 - 269
Target Start/End: Original strand, 29447481 - 29447536
Alignment:
Q  214 tgtaattatatgtgtcggtgttgtgttggtatcagacacgacacgtgtctgacacc 269  Q
    ||||||||||||||| ||||| |||| ||| |||||||||||| ||||| ||||||    
T  29447481 tgtaattatatgtgttggtgtcgtgtcggtgtcagacacgacatgtgtccgacacc 29447536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 256
Target Start/End: Complemental strand, 11927108 - 11927066
Alignment:
Q  214 tgtaattatatgtgtcggtgttgtgttggtatcagacacgaca 256  Q
    ||||||||||||||||||||| |||||||| ||| ||||||||    
T  11927108 tgtaattatatgtgtcggtgtcgtgttggtgtcatacacgaca 11927066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 284
Target Start/End: Complemental strand, 15816151 - 15816081
Alignment:
Q  214 tgtaattatatgtgtcggtgttgtgttggtatcagacacgacacgtgtctgacaccaggatacacctaatc 284  Q
    |||||||||| |||||||||| |||||||| || |||||||||||  || |||||| ||| || |||||||    
T  15816151 tgtaattataagtgtcggtgtcgtgttggtgtcggacacgacacgaatccgacaccgggacacgcctaatc 15816081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 295
Target Start/End: Complemental strand, 26902197 - 26902116
Alignment:
Q  214 tgtaattatatgtgtcggtgttgtgttggtatcagacacgacacgtgtctgacaccaggatacacctaatctgaagagtgtc 295  Q
    ||||||||||||||||||||| || |  || || ||||||||||||||||| |||  ||| || ||| |||||| |||||||    
T  26902197 tgtaattatatgtgtcggtgtcgtatgagtgtcggacacgacacgtgtctggcacggggacacgccttatctgaggagtgtc 26902116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 4122272 - 4122224
Alignment:
Q  213 ttgtaattatatgtgtcggtgttgtgttggtatcagacacgacacgtgt 261  Q
    |||||||||||||||||||||||||||   | ||| |||||||||||||    
T  4122272 ttgtaattatatgtgtcggtgttgtgtcaatgtcaaacacgacacgtgt 4122224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 294
Target Start/End: Original strand, 11944702 - 11944782
Alignment:
Q  214 tgtaattatatgtgtcggtgttgtgttggtatcagacacgacacgtgtctgacaccaggatacacctaatctgaagagtgt 294  Q
    ||||||||||||||||||||| |||||| | ||| |||||||| || || ||||||  || || ||||||| || ||||||    
T  11944702 tgtaattatatgtgtcggtgtcgtgttgatgtcatacacgacatgtatccgacaccgagacacgcctaatccgatgagtgt 11944782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.000000000007; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 216 - 268
Target Start/End: Original strand, 30183588 - 30183640
Alignment:
Q  216 taattatatgtgtcggtgttgtgttggtatcagacacgacacgtgtctgacac 268  Q
    |||||| | |||||||||| ||||||||||||||||||||||||||| |||||    
T  30183588 taattacaagtgtcggtgtcgtgttggtatcagacacgacacgtgtccgacac 30183640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 268
Target Start/End: Original strand, 6401535 - 6401589
Alignment:
Q  214 tgtaattatatgtgtcggtgttgtgttggtatcagacacgacacgtgtctgacac 268  Q
    ||||||||||||||||||||| ||||  || || |||||||||||||||||||||    
T  6401535 tgtaattatatgtgtcggtgtcgtgtcagtgtcggacacgacacgtgtctgacac 6401589  T

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Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 264
Target Start/End: Original strand, 21814298 - 21814348
Alignment:
Q  214 tgtaattatatgtgtcggtgttgtgttggtatcagacacgacacgtgtctg 264  Q
    ||||||||||||||||||||| |||| ||| || |||||||||||||||||    
T  21814298 tgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgacacgtgtctg 21814348  T

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Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 214 - 295
Target Start/End: Complemental strand, 32766965 - 32766884
Alignment:
Q  214 tgtaattatatgtgtcggtgttgtgttggtatcagacacgacacgtgtctgacaccaggatacacctaatctgaagagtgtc 295  Q
    |||||||||||||||  |||| |||| ||| ||  | |||||||||||| |||||||||||||  ||||||||| |||||||    
T  32766965 tgtaattatatgtgtttgtgtcgtgtcggtgtcgaaaacgacacgtgtccgacaccaggatacgtctaatctgaggagtgtc 32766884  T

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Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 294
Target Start/End: Original strand, 26312829 - 26312875
Alignment:
Q  248 gacacgacacgtgtctgacaccaggatacacctaatctgaagagtgt 294  Q
    ||||||| |||||||||||||||||| |||||||||| || ||||||    
T  26312829 gacacgatacgtgtctgacaccaggacacacctaatccgaggagtgt 26312875  T

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Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 267
Target Start/End: Original strand, 18592110 - 18592163
Alignment:
Q  214 tgtaattatatgtgtcggtgttgtgttggtatcagacacgacacgtgtctgaca 267  Q
    |||||||||||||| |||||| |||| ||| || ||||| ||||||||||||||    
T  18592110 tgtaattatatgtgccggtgtcgtgtcggtgtcggacacaacacgtgtctgaca 18592163  T

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Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 248 - 284
Target Start/End: Original strand, 30098397 - 30098433
Alignment:
Q  248 gacacgacacgtgtctgacaccaggatacacctaatc 284  Q
    ||||||||||||||| |||||||||| ||||||||||    
T  30098397 gacacgacacgtgtcagacaccaggacacacctaatc 30098433  T

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Target: scaffold0003 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 284
Target Start/End: Original strand, 241631 - 241701
Alignment:
Q  214 tgtaattatatgtgtcggtgttgtgttggtatcagacacgacacgtgtctgacaccaggatacacctaatc 284  Q
    |||||||||  |||||||||| |||||||| || ||||||||||||||| |||||| ||| || |||||||    
T  241631 tgtaattatgagtgtcggtgtcgtgttggtgtcggacacgacacgtgtccgacaccgggacacgcctaatc 241701  T

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Target: scaffold0003; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 303
Target Start/End: Complemental strand, 236964 - 236918
Alignment:
Q  257 cgtgtctgacaccaggatacacctaatctgaagagtgtctctgcttc 303  Q
    ||||||||||||| ||| ||||||||||||| |||||||| ||||||    
T  236964 cgtgtctgacaccgggacacacctaatctgaggagtgtctgtgcttc 236918  T

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Target: scaffold0122 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 257 - 294
Target Start/End: Original strand, 7585 - 7622
Alignment:
Q  257 cgtgtctgacaccaggatacacctaatctgaagagtgt 294  Q
    |||||| |||||||||||||||||||||||||||||||    
T  7585 cgtgtccgacaccaggatacacctaatctgaagagtgt 7622  T

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Target: scaffold0623 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 268
Target Start/End: Complemental strand, 6018 - 5964
Alignment:
Q  214 tgtaattatatgtgtcggtgttgtgttggtatcagacacgacacgtgtctgacac 268  Q
    ||||||||||||||||||||| || | ||| ||  ||||||||||||||||||||    
T  6018 tgtaattatatgtgtcggtgtcgtatcggtgtcgaacacgacacgtgtctgacac 5964  T

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Target: scaffold0008 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 295
Target Start/End: Complemental strand, 263394 - 263313
Alignment:
Q  214 tgtaattatatgtgtcggtgttgtgttggtatcagacacgacacgtgtctgacaccaggatacacctaatctgaagagtgtc 295  Q
    |||||||||| ||||| |||| |||| ||| |||||||||||||||||  || |||| || || ||||||| || |||||||    
T  263394 tgtaattataagtgtcagtgtcgtgtcggtgtcagacacgacacgtgttcgataccaagacacgcctaatccgaggagtgtc 263313  T

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