View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8528_low_5 (Length: 571)

Name: NF8528_low_5
Description: NF8528
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8528_low_5
NF8528_low_5
[»] chr1 (59 HSPs)
chr1 (17-262)||(2567522-2567767)
chr1 (338-534)||(2567245-2567446)
chr1 (395-534)||(8763960-8764099)
chr1 (395-534)||(9659179-9659317)
chr1 (395-530)||(18649352-18649487)
chr1 (395-534)||(43959821-43959960)
chr1 (395-534)||(49078083-49078222)
chr1 (395-534)||(5855491-5855630)
chr1 (395-534)||(9853277-9853416)
chr1 (395-534)||(41663856-41663995)
chr1 (404-534)||(10336485-10336615)
chr1 (395-532)||(50503361-50503498)
chr1 (395-534)||(11397889-11398027)
chr1 (395-534)||(16956435-16956574)
chr1 (395-534)||(26325781-26325920)
chr1 (395-534)||(34719745-34719884)
chr1 (395-497)||(17642004-17642106)
chr1 (395-532)||(33004015-33004152)
chr1 (395-466)||(4581682-4581753)
chr1 (395-534)||(5504000-5504139)
chr1 (395-534)||(10422757-10422896)
chr1 (395-534)||(40288477-40288616)
chr1 (395-524)||(26660117-26660245)
chr1 (395-466)||(12036743-12036815)
chr1 (398-534)||(17092480-17092616)
chr1 (395-475)||(50371834-50371914)
chr1 (395-534)||(2980931-2981070)
chr1 (395-534)||(18915836-18915975)
chr1 (395-504)||(37339818-37339928)
chr1 (405-534)||(33418125-33418254)
chr1 (395-475)||(44969692-44969772)
chr1 (430-534)||(48798105-48798209)
chr1 (395-534)||(17358471-17358610)
chr1 (395-534)||(45361882-45362021)
chr1 (395-464)||(6899597-6899666)
chr1 (395-475)||(10172971-10173051)
chr1 (395-475)||(14357783-14357863)
chr1 (395-475)||(16263573-16263653)
chr1 (395-475)||(33498839-33498919)
chr1 (395-534)||(30927727-30927866)
chr1 (395-534)||(31576547-31576686)
chr1 (395-478)||(45726433-45726516)
chr1 (405-534)||(14254278-14254407)
chr1 (395-472)||(17389802-17389879)
chr1 (395-443)||(892302-892350)
chr1 (416-504)||(31152715-31152803)
chr1 (395-475)||(50094932-50095012)
chr1 (395-443)||(51437517-51437565)
chr1 (395-534)||(15238106-15238245)
chr1 (395-534)||(32150922-32151061)
chr1 (430-504)||(28324615-28324689)
chr1 (395-528)||(15465940-15466073)
chr1 (453-534)||(34334353-34334434)
chr1 (395-436)||(35211172-35211213)
chr1 (395-464)||(38791610-38791679)
chr1 (455-536)||(51437436-51437517)
chr1 (486-534)||(892388-892436)
chr1 (415-475)||(44716235-44716295)
chr1 (395-475)||(46929738-46929818)
[»] scaffold0011 (2 HSPs)
scaffold0011 (395-534)||(224288-224427)
scaffold0011 (396-534)||(186489-186626)
[»] chr4 (66 HSPs)
chr4 (395-534)||(24166423-24166562)
chr4 (396-534)||(33647694-33647832)
chr4 (395-534)||(29895760-29895899)
chr4 (395-534)||(36145214-36145353)
chr4 (395-556)||(38075384-38075545)
chr4 (395-556)||(53599011-53599172)
chr4 (395-534)||(38166000-38166139)
chr4 (395-534)||(52950055-52950194)
chr4 (396-534)||(40780861-40780999)
chr4 (395-505)||(16450302-16450412)
chr4 (395-504)||(10541019-10541127)
chr4 (395-534)||(47078431-47078570)
chr4 (396-534)||(7741898-7742036)
chr4 (395-524)||(3159468-3159597)
chr4 (401-534)||(8888995-8889128)
chr4 (397-529)||(21429279-21429411)
chr4 (395-534)||(5472847-5472986)
chr4 (395-534)||(20128282-20128421)
chr4 (398-534)||(1940779-1940912)
chr4 (406-508)||(3507270-3507371)
chr4 (425-534)||(1446799-1446908)
chr4 (395-524)||(15732447-15732576)
chr4 (395-536)||(47682381-47682521)
chr4 (395-475)||(2559339-2559419)
chr4 (395-475)||(7246645-7246725)
chr4 (395-534)||(36262766-36262903)
chr4 (395-534)||(6779184-6779323)
chr4 (395-534)||(15839934-15840072)
chr4 (397-475)||(295534-295612)
chr4 (396-530)||(13073515-13073649)
chr4 (395-534)||(31588657-31588798)
chr4 (395-496)||(14124027-14124128)
chr4 (395-532)||(42722576-42722713)
chr4 (395-504)||(48015072-48015181)
chr4 (396-472)||(14859326-14859402)
chr4 (395-475)||(49260664-49260744)
chr4 (395-534)||(43458586-43458725)
chr4 (395-534)||(55921007-55921146)
chr4 (396-470)||(6032643-6032717)
chr4 (395-472)||(14567274-14567351)
chr4 (395-472)||(14597899-14597976)
chr4 (429-529)||(14567937-14568037)
chr4 (395-475)||(17080075-17080155)
chr4 (395-503)||(29588740-29588848)
chr4 (395-466)||(4738659-4738730)
chr4 (395-470)||(14858747-14858822)
chr4 (395-466)||(20421814-20421885)
chr4 (395-534)||(7000497-7000631)
chr4 (395-465)||(18531561-18531631)
chr4 (425-506)||(8064827-8064908)
chr4 (395-536)||(15829670-15829811)
chr4 (395-504)||(16645121-16645230)
chr4 (407-508)||(20532420-20532521)
chr4 (395-475)||(8424586-8424666)
chr4 (400-504)||(8824567-8824671)
chr4 (404-464)||(46108734-46108794)
chr4 (395-534)||(38168230-38168368)
chr4 (395-534)||(41339395-41339533)
chr4 (396-475)||(48352509-48352588)
chr4 (403-465)||(54946291-54946353)
chr4 (395-504)||(43468350-43468459)
chr4 (395-504)||(45721089-45721198)
chr4 (395-534)||(3574447-3574584)
chr4 (395-475)||(21192672-21192752)
chr4 (395-439)||(25406562-25406606)
chr4 (395-475)||(37369041-37369121)
[»] chr5 (62 HSPs)
chr5 (395-534)||(8513488-8513627)
chr5 (395-534)||(42086296-42086435)
chr5 (395-534)||(1538400-1538539)
chr5 (396-508)||(42291505-42291617)
chr5 (395-534)||(5731919-5732058)
chr5 (395-536)||(3653913-3654052)
chr5 (395-505)||(9805002-9805112)
chr5 (396-534)||(20525807-20525945)
chr5 (396-534)||(37263210-37263347)
chr5 (395-534)||(24498952-24499090)
chr5 (395-534)||(25417182-25417321)
chr5 (395-534)||(14588616-14588755)
chr5 (395-534)||(19572693-19572832)
chr5 (395-534)||(23247351-23247489)
chr5 (395-534)||(38897718-38897856)
chr5 (395-534)||(42861217-42861356)
chr5 (395-504)||(23383656-23383765)
chr5 (395-512)||(40117406-40117523)
chr5 (395-475)||(7616948-7617028)
chr5 (395-471)||(21375383-21375459)
chr5 (395-534)||(12704983-12705122)
chr5 (415-534)||(14974343-14974462)
chr5 (395-534)||(41163459-41163597)
chr5 (395-478)||(43399153-43399236)
chr5 (395-536)||(20682616-20682758)
chr5 (407-505)||(24875343-24875441)
chr5 (395-504)||(41800976-41801085)
chr5 (395-443)||(27648424-27648472)
chr5 (395-534)||(9812841-9812980)
chr5 (395-526)||(12081885-12082016)
chr5 (395-534)||(12766100-12766239)
chr5 (395-470)||(20255402-20255477)
chr5 (395-534)||(18136275-18136418)
chr5 (395-464)||(20228756-20228825)
chr5 (413-534)||(30995090-30995211)
chr5 (402-534)||(7308370-7308502)
chr5 (395-475)||(18262617-18262697)
chr5 (395-534)||(7866550-7866689)
chr5 (395-466)||(13664297-13664368)
chr5 (395-466)||(39099778-39099849)
chr5 (395-470)||(40773306-40773381)
chr5 (395-460)||(17693339-17693405)
chr5 (395-504)||(7336619-7336727)
chr5 (395-496)||(22655157-22655257)
chr5 (419-504)||(35813021-35813106)
chr5 (395-503)||(4016254-4016362)
chr5 (395-439)||(20692997-20693041)
chr5 (395-475)||(21149762-21149842)
chr5 (401-464)||(6764462-6764525)
chr5 (395-534)||(11845800-11845939)
chr5 (395-465)||(14728121-14728191)
chr5 (419-533)||(26077111-26077225)
chr5 (448-534)||(28857097-28857183)
chr5 (404-465)||(15034113-15034174)
chr5 (395-460)||(18045682-18045746)
chr5 (395-472)||(25452956-25453032)
chr5 (454-534)||(1898970-1899050)
chr5 (395-475)||(9168252-9168332)
chr5 (395-475)||(24463885-24463965)
chr5 (395-443)||(28857009-28857057)
chr5 (395-443)||(28857206-28857254)
chr5 (429-469)||(35561851-35561891)
[»] chr2 (61 HSPs)
chr2 (395-534)||(18902529-18902668)
chr2 (395-534)||(8410099-8410238)
chr2 (395-534)||(25540403-25540542)
chr2 (395-536)||(14169608-14169749)
chr2 (406-534)||(10026626-10026754)
chr2 (395-534)||(7747242-7747381)
chr2 (395-534)||(21286412-21286551)
chr2 (395-534)||(38005370-38005509)
chr2 (395-533)||(10823029-10823167)
chr2 (395-533)||(28616378-28616516)
chr2 (395-536)||(12864190-12864331)
chr2 (406-534)||(10046487-10046614)
chr2 (395-534)||(25549696-25549835)
chr2 (395-534)||(41220603-41220742)
chr2 (395-534)||(44945562-44945700)
chr2 (395-534)||(22593103-22593240)
chr2 (395-504)||(12455308-12455417)
chr2 (395-504)||(39806884-39806993)
chr2 (395-504)||(44139482-44139591)
chr2 (395-495)||(16325602-16325702)
chr2 (395-536)||(16813164-16813304)
chr2 (395-536)||(16852443-16852583)
chr2 (400-466)||(7787092-7787158)
chr2 (395-533)||(35946708-35946845)
chr2 (395-532)||(11069848-11069985)
chr2 (401-534)||(39201513-39201646)
chr2 (395-475)||(9360747-9360827)
chr2 (395-534)||(2550836-2550975)
chr2 (395-498)||(41031905-41032008)
chr2 (400-498)||(10669596-10669694)
chr2 (395-533)||(15234060-15234198)
chr2 (395-497)||(34722685-34722787)
chr2 (395-533)||(38962732-38962870)
chr2 (396-465)||(2784969-2785038)
chr2 (396-464)||(3042503-3042571)
chr2 (395-475)||(3643886-3643966)
chr2 (396-534)||(20612534-20612674)
chr2 (415-475)||(24179595-24179655)
chr2 (395-475)||(34130301-34130381)
chr2 (395-475)||(37560200-37560280)
chr2 (395-443)||(44548723-44548771)
chr2 (395-483)||(44773282-44773370)
chr2 (395-466)||(6358150-6358221)
chr2 (395-462)||(20116611-20116678)
chr2 (405-504)||(33634448-33634547)
chr2 (395-530)||(42770650-42770785)
chr2 (415-534)||(45263686-45263805)
chr2 (405-530)||(331473-331598)
chr2 (429-534)||(21180347-21180452)
chr2 (395-444)||(29422273-29422322)
chr2 (395-436)||(44023361-44023402)
chr2 (395-443)||(792213-792261)
chr2 (395-507)||(3848913-3849025)
chr2 (395-531)||(5035259-5035395)
chr2 (395-530)||(2528340-2528475)
chr2 (395-466)||(27725976-27726047)
chr2 (395-466)||(28525454-28525525)
chr2 (395-503)||(29653626-29653729)
chr2 (395-466)||(34346286-34346357)
chr2 (395-465)||(18846220-18846290)
chr2 (448-504)||(40968967-40969023)
[»] chr7 (48 HSPs)
chr7 (395-534)||(1797431-1797570)
chr7 (395-534)||(17748381-17748520)
chr7 (395-534)||(48804654-48804793)
chr7 (395-536)||(1605910-1606051)
chr7 (395-504)||(38578866-38578975)
chr7 (416-536)||(4973130-4973250)
chr7 (395-534)||(43861971-43862110)
chr7 (395-504)||(3353426-3353534)
chr7 (395-532)||(22973940-22974077)
chr7 (396-504)||(26423288-26423395)
chr7 (395-534)||(10047875-10048014)
chr7 (395-534)||(42210261-42210400)
chr7 (395-534)||(8734685-8734824)
chr7 (395-530)||(21190779-21190914)
chr7 (395-534)||(22993366-22993505)
chr7 (395-478)||(41945500-41945583)
chr7 (395-504)||(29151941-29152050)
chr7 (395-534)||(13095829-13095968)
chr7 (395-534)||(23658151-23658289)
chr7 (395-534)||(34659197-34659336)
chr7 (395-475)||(48551887-48551967)
chr7 (395-534)||(14650288-14650427)
chr7 (395-534)||(47341847-47341986)
chr7 (397-534)||(18785640-18785777)
chr7 (395-463)||(43346778-43346846)
chr7 (395-534)||(4195201-4195340)
chr7 (395-466)||(27028318-27028389)
chr7 (395-466)||(28744201-28744272)
chr7 (395-458)||(32768984-32769047)
chr7 (415-534)||(36619273-36619392)
chr7 (425-504)||(44336894-44336973)
chr7 (395-465)||(3603397-3603467)
chr7 (404-533)||(41267932-41268062)
chr7 (395-464)||(5069814-5069883)
chr7 (395-504)||(10317745-10317853)
chr7 (395-504)||(22573814-22573922)
chr7 (405-533)||(20097161-20097289)
chr7 (395-439)||(22268040-22268084)
chr7 (396-504)||(27875088-27875196)
chr7 (395-534)||(43925483-43925622)
chr7 (395-470)||(48244355-48244430)
chr7 (395-464)||(24983417-24983487)
chr7 (395-465)||(39474980-39475050)
chr7 (402-463)||(28396166-28396227)
chr7 (395-536)||(37514890-37515031)
chr7 (400-465)||(45960007-45960072)
chr7 (395-423)||(12422127-12422155)
chr7 (395-475)||(39420867-39420947)
[»] chr6 (36 HSPs)
chr6 (395-534)||(13036003-13036142)
chr6 (395-534)||(21898620-21898759)
chr6 (395-534)||(30788852-30788989)
chr6 (395-534)||(5253222-5253361)
chr6 (395-534)||(14107357-14107496)
chr6 (395-512)||(3601078-3601195)
chr6 (395-534)||(6606096-6606235)
chr6 (395-475)||(9633624-9633704)
chr6 (396-536)||(11142573-11142713)
chr6 (395-534)||(13468905-13469044)
chr6 (396-470)||(32157167-32157241)
chr6 (395-528)||(12635792-12635925)
chr6 (400-534)||(2271307-2271439)
chr6 (395-534)||(8611973-8612112)
chr6 (395-534)||(8932633-8932772)
chr6 (395-534)||(8944099-8944238)
chr6 (395-530)||(12606406-12606541)
chr6 (395-466)||(19089538-19089609)
chr6 (395-534)||(29444764-29444903)
chr6 (395-534)||(34954618-34954757)
chr6 (395-500)||(5029823-5029928)
chr6 (395-536)||(8938681-8938822)
chr6 (395-534)||(9179735-9179874)
chr6 (395-530)||(29333138-29333272)
chr6 (395-464)||(14783419-14783488)
chr6 (395-464)||(31129219-31129288)
chr6 (395-534)||(24671865-24672004)
chr6 (395-508)||(3587944-3588057)
chr6 (395-472)||(13391320-13391397)
chr6 (396-504)||(8149797-8149904)
chr6 (432-536)||(9366459-9366563)
chr6 (395-467)||(30410484-30410556)
chr6 (419-467)||(33940050-33940098)
chr6 (395-534)||(10311468-10311607)
chr6 (405-475)||(8888913-8888983)
chr6 (395-475)||(13584445-13584529)
[»] chr8 (45 HSPs)
chr8 (395-534)||(14666070-14666209)
chr8 (395-503)||(43032904-43033012)
chr8 (395-534)||(8141074-8141213)
chr8 (395-534)||(8997543-8997682)
chr8 (395-534)||(24837214-24837353)
chr8 (395-556)||(9859994-9860156)
chr8 (396-533)||(15884556-15884692)
chr8 (395-496)||(18374020-18374121)
chr8 (396-505)||(4479296-4479404)
chr8 (395-534)||(2467117-2467256)
chr8 (395-534)||(6100444-6100583)
chr8 (395-497)||(43027314-43027416)
chr8 (395-534)||(583786-583923)
chr8 (395-534)||(68097-68236)
chr8 (395-534)||(3418512-3418651)
chr8 (395-534)||(10927578-10927717)
chr8 (395-534)||(14846548-14846686)
chr8 (395-534)||(16893909-16894046)
chr8 (395-534)||(17981413-17981552)
chr8 (395-464)||(39969914-39969983)
chr8 (395-504)||(45521171-45521279)
chr8 (396-534)||(7673657-7673792)
chr8 (396-532)||(13085498-13085633)
chr8 (400-475)||(11785946-11786021)
chr8 (425-504)||(20240572-20240651)
chr8 (425-504)||(20252416-20252495)
chr8 (395-533)||(8817006-8817144)
chr8 (485-534)||(22810052-22810101)
chr8 (395-459)||(2964123-2964187)
chr8 (404-468)||(12754063-12754127)
chr8 (395-471)||(22212514-22212590)
chr8 (438-534)||(38922456-38922552)
chr8 (395-466)||(11298266-11298337)
chr8 (400-475)||(13357960-13358035)
chr8 (395-534)||(33401799-33401937)
chr8 (404-534)||(1012985-1013115)
chr8 (395-437)||(1653859-1653901)
chr8 (395-437)||(1742235-1742277)
chr8 (399-437)||(4772054-4772092)
chr8 (448-534)||(29933745-29933830)
chr8 (405-470)||(3567940-3568005)
chr8 (395-524)||(34710566-34710695)
chr8 (448-480)||(18091426-18091458)
chr8 (395-475)||(23895599-23895679)
chr8 (402-462)||(24938568-24938628)
[»] chr3 (69 HSPs)
chr3 (395-534)||(48341988-48342127)
chr3 (396-532)||(53649697-53649833)
chr3 (399-534)||(10040525-10040659)
chr3 (395-534)||(13893894-13894033)
chr3 (395-534)||(25294928-25295067)
chr3 (395-534)||(29127887-29128026)
chr3 (395-534)||(29762155-29762294)
chr3 (395-530)||(35315928-35316063)
chr3 (395-530)||(47219116-47219251)
chr3 (396-534)||(6462380-6462518)
chr3 (395-497)||(28572211-28572313)
chr3 (397-509)||(8362570-8362682)
chr3 (396-532)||(51682955-51683091)
chr3 (395-530)||(33251634-33251769)
chr3 (395-534)||(45877422-45877561)
chr3 (395-534)||(54261194-54261333)
chr3 (400-497)||(50405608-50405705)
chr3 (404-536)||(49198317-49198449)
chr3 (395-534)||(15320154-15320293)
chr3 (395-534)||(29135881-29136020)
chr3 (395-534)||(31072846-31072985)
chr3 (395-466)||(49021203-49021274)
chr3 (395-534)||(49543487-49543626)
chr3 (396-466)||(3507534-3507604)
chr3 (395-529)||(51060281-51060415)
chr3 (395-504)||(23511565-23511674)
chr3 (395-504)||(30767247-30767356)
chr3 (395-536)||(41630512-41630653)
chr3 (429-534)||(42412808-42412913)
chr3 (395-475)||(15084945-15085025)
chr3 (398-534)||(26207804-26207940)
chr3 (395-534)||(7328812-7328950)
chr3 (400-475)||(35923628-35923703)
chr3 (395-470)||(43330732-43330807)
chr3 (395-465)||(3136694-3136764)
chr3 (395-505)||(26590266-26590376)
chr3 (395-504)||(7310703-7310812)
chr3 (395-456)||(47164152-47164213)
chr3 (395-475)||(55069679-55069759)
chr3 (395-470)||(928632-928707)
chr3 (397-496)||(4638160-4638259)
chr3 (395-498)||(26043816-26043919)
chr3 (395-470)||(45450447-45450522)
chr3 (395-466)||(47749105-47749176)
chr3 (395-437)||(19147026-19147068)
chr3 (395-536)||(26361967-26362106)
chr3 (395-504)||(7650225-7650334)
chr3 (395-504)||(26923261-26923370)
chr3 (395-504)||(30045819-30045928)
chr3 (417-534)||(32873571-32873687)
chr3 (395-444)||(36043674-36043723)
chr3 (395-464)||(47471869-47471938)
chr3 (430-531)||(49082795-49082896)
chr3 (419-475)||(7648767-7648823)
chr3 (407-475)||(8164580-8164648)
chr3 (395-475)||(24506648-24506728)
chr3 (400-504)||(33688949-33689053)
chr3 (395-459)||(50753341-50753405)
chr3 (408-532)||(52364813-52364937)
chr3 (395-454)||(19873420-19873479)
chr3 (395-446)||(21325120-21325171)
chr3 (417-475)||(3755597-3755655)
chr3 (395-465)||(54237485-54237555)
chr3 (395-464)||(10043720-10043789)
chr3 (395-508)||(35998571-35998683)
chr3 (429-534)||(39849040-39849144)
chr3 (457-534)||(50682445-50682522)
chr3 (395-471)||(20948061-20948137)
chr3 (396-504)||(34662320-34662428)
[»] scaffold0009 (2 HSPs)
scaffold0009 (395-504)||(42831-42940)
scaffold0009 (396-443)||(9504-9551)
[»] scaffold0002 (2 HSPs)
scaffold0002 (395-534)||(541-680)
scaffold0002 (395-534)||(319393-319532)
[»] scaffold0006 (1 HSPs)
scaffold0006 (398-534)||(68488-68621)
[»] scaffold0291 (1 HSPs)
scaffold0291 (395-504)||(6856-6965)
[»] scaffold0016 (1 HSPs)
scaffold0016 (395-504)||(8700-8809)
[»] scaffold0170 (1 HSPs)
scaffold0170 (405-536)||(9814-9945)
[»] scaffold0029 (1 HSPs)
scaffold0029 (395-534)||(41015-41154)
[»] scaffold0010 (2 HSPs)
scaffold0010 (395-494)||(155710-155809)
scaffold0010 (396-530)||(25784-25918)
[»] scaffold0005 (4 HSPs)
scaffold0005 (429-534)||(271107-271212)
scaffold0005 (395-472)||(219402-219479)
scaffold0005 (395-472)||(250024-250101)
scaffold0005 (429-529)||(249338-249438)
[»] scaffold0209 (1 HSPs)
scaffold0209 (395-534)||(12546-12683)
[»] scaffold0316 (1 HSPs)
scaffold0316 (395-466)||(1613-1684)
[»] scaffold0223 (1 HSPs)
scaffold0223 (395-533)||(16851-16989)
[»] scaffold0041 (1 HSPs)
scaffold0041 (395-439)||(25151-25195)
[»] scaffold0004 (2 HSPs)
scaffold0004 (395-466)||(7834-7905)
scaffold0004 (395-475)||(94979-95060)
[»] scaffold0116 (1 HSPs)
scaffold0116 (404-501)||(17394-17491)
[»] scaffold0376 (1 HSPs)
scaffold0376 (395-475)||(12700-12780)
[»] scaffold0045 (1 HSPs)
scaffold0045 (395-475)||(58032-58112)
[»] scaffold0086 (1 HSPs)
scaffold0086 (395-497)||(26191-26293)
[»] scaffold0079 (1 HSPs)
scaffold0079 (395-436)||(8232-8273)
[»] scaffold0155 (1 HSPs)
scaffold0155 (396-464)||(19296-19364)


Alignment Details
Target: chr1 (Bit Score: 238; Significance: 1e-131; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 17 - 262
Target Start/End: Complemental strand, 2567767 - 2567522
Alignment:
Q  17 acaaccactagaacacaaagggaaagtgtagatcaagccaaaccaacgtcaacggattggtggaattacaactacacgtgttagggcaatggtttttctt 116  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  2567767 acaaccactagaacactaagggaaagtgtagatcaagccaaaccaacgtcaacggattggtggaattacaactacacgtgttcgggcaatggtttttctt 2567668  T
Q  117 aacgtcgaccaatttccacattcaaattggtcaccatatattttgaaaactcattgtgctcacataatttacttcttcttcattaaattaatttatggtc 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2567667 aacgtcgaccaatttccacattcaaattggtcaccatatattttgaaaactcattgtgctcacataatttacttcttcttcattaaattaatttatggtc 2567568  T
Q  217 gaaatttgtcaactaccgtatatgtggttggttagattttaacttc 262  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  2567567 gaaatttgtcaactaccgtatatgtggttggttagattttaacttc 2567522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 338 - 534
Target Start/End: Complemental strand, 2567446 - 2567245
Alignment:
Q  338 cctactctttatttatttgttattttgaagttataaaaattacattttannnnnnnn-----ctttcgcaccggtttccgatccaccaaagatggacgac 432  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||             |||||| |||||||||||| |||||||||||||||| |    
T  2567446 cctactctttatttatttgttattttgaagttataaaaattacattttattaatttttttttctttcgtaccggtttccgacccaccaaagatggacggc 2567347  T
Q  433 taatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattctccgaataagtccttcgaaggagctcct 532  Q
    ||||||| |||| ||||||||||||||||||||| ||| |||| |||||||||  ||||||||||| ||||||||||||| |||||| ||||||||||||    
T  2567346 taatctgactcgtgagtagaggcatgcgcactggccaagcgttgttttccccgaaaatcgaacccggtattctccgaatacgtccttggaaggagctcct 2567247  T
Q  533 tg 534  Q
    ||    
T  2567246 tg 2567245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 395 - 534
Target Start/End: Complemental strand, 8764099 - 8763960
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||||||| ||||||| | ||||||||||||| |||||| | ||||||||||||||||||| |||  ||| ||  ||| ||||| ||||    
T  8764099 ctttcgcaccggtttccgacccaccaacggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagtgttgttccccctgggaaacgaa 8764000  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||||||||| |||  || |||||| ||||||||||||||    
T  8763999 cccgatattccccgggtacgtccttggaaggagctccttg 8763960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 395 - 534
Target Start/End: Original strand, 9659179 - 9659317
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||||| | ||||||||| ||||||||||||| |||||  | ||| ||||||||||||| ||||||||||  || ||| ||||||||||    
T  9659179 ctttcgcaccggtttccaacccaccaaaggtggacgactaatccggctcatgcgtaaaggcatgcgcactagtcaaacgtt-gttcccctgggaatcgaa 9659277  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||| ||||| |||| || |||||| ||| ||||||||||    
T  9659278 cccggtattccccgagtacgtccttagaatgagctccttg 9659317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 395 - 530
Target Start/End: Original strand, 18649352 - 18649487
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||||| |||||| |||| ||| ||| ||||||||||||   ||||||||||||||||||||||| |||| ||  ||| |  |||||||    
T  18649352 ctttcgcaccggtttccaatccactaaaggtgggcgattaatctggctcgtacgtagaggcatgcgcactggtcaagcgttgttccccctgaaaatcgaa 18649451  T
Q  495 cccgatattctccgaataagtccttcgaaggagctc 530  Q
    |||||||||||||  ||| |||||| ||||||||||    
T  18649452 cccgatattctccagatacgtccttggaaggagctc 18649487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 395 - 534
Target Start/End: Original strand, 43959821 - 43959960
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||||||||||||||||||||||| |||| ||| ||||||||| |||||| | ||||||||||||||||||| ||| |||| ||  ||| |||||| |||    
T  43959821 ctttcgcaccggtttccgatccactaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccctgggaattgaa 43959920  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||||||||| |||  || ||| || |||||||| |||||    
T  43959921 cccgatattccccgggtacgtcattggaaggagcaccttg 43959960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 395 - 534
Target Start/End: Complemental strand, 49078222 - 49078083
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||||||| | ||||| | || |||||||||| |||||  | ||||||||||||||||||| |||  ||| ||| ||| ||||||||||    
T  49078222 ctttcgcaccggtttccgacctaccaatggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgtttcccctgggaatcgaa 49078123  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||| ||||| ||| ||| |||||| ||||||||||||||    
T  49078122 cccggtattccccggatacgtccttagaaggagctccttg 49078083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 395 - 534
Target Start/End: Complemental strand, 5855630 - 5855491
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||||||| |||||||||| |||| |||| || |||||||||| | |||  | ||||||||||||||||||| ||| |||| ||   || ||||||||||    
T  5855630 ctttcgcatcggtttccgacccactaaaggtgaacgactaatccgcctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctgggaatcgaa 5855531  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||| ||||| ||||||| |||||| ||||||||||||||    
T  5855530 cccggtattccccgaatacgtccttggaaggagctccttg 5855491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 395 - 534
Target Start/End: Original strand, 9853277 - 9853416
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||| |||||| |||| || ||||||||| ||||||| |||||||| ||| | |||||||||||||||||||| ||||||| ||| |||  |||||||||    
T  9853277 cttttgcaccgatttctgacccaccaaaggtggacgattaatctggttcgtgtgtagaggcatgcgcactggtaaaacgttgtttcccctaggaatcgaa 9853376  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||| |||| ||||  ||  ||||| ||||||||||||||    
T  9853377 cccggtattttccgggtacatccttggaaggagctccttg 9853416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 395 - 534
Target Start/End: Original strand, 41663856 - 41663995
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||||||| ||||||| | |||||||||||||  ||||  | ||||||||||||||||||  |||  ||| ||  ||| ||||||||||    
T  41663856 ctttcgcaccggtttccgacccaccaatggtggacgactaatccagctcatgcgtagaggcatgcgcactgaccaagtgttgttccccctgggaatcgaa 41663955  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||| ||||| ||| ||| |||||| ||||||||||||||    
T  41663956 cccggtattccccggatacgtccttagaaggagctccttg 41663995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 404 - 534
Target Start/End: Complemental strand, 10336615 - 10336485
Alignment:
Q  404 cggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatatt 503  Q
    |||||| ||||||| ||||| ||||||| ||||| |||||  | ||||||||||||||||||||||| |||| ||  ||| |  ||||||||||||||||    
T  10336615 cggttttcgatccatcaaaggtggacgattaatccggctcatgcgtagaggcatgcgcactggtcaagcgttgttccccctgaaaatcgaacccgatatt 10336516  T
Q  504 ctccgaataagtccttcgaaggagctccttg 534  Q
    ||||| ||| ||| || ||||||||||||||    
T  10336515 ctccggatacgtctttggaaggagctccttg 10336485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 395 - 532
Target Start/End: Original strand, 50503361 - 50503498
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||||||| |||||||||| ||||||  | ||| |||| |||| |||||| | |||||||||||||||||||||||  ||| ||  ||| ||||||||||    
T  50503361 ctttcgcatcggtttccgacccaccattggtgggcgacaaatccggctcgtgcgtagaggcatgcgcactggtcaagtgttgttccccctgggaatcgaa 50503460  T
Q  495 cccgatattctccgaataagtccttcgaaggagctcct 532  Q
    |||||||||| ||| ||| ||||||  |||||||||||    
T  50503461 cccgatattccccggatacgtccttgaaaggagctcct 50503498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 395 - 534
Target Start/End: Original strand, 11397889 - 11398027
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||| ||||||| ||||||||| ||||||||||||| | |||  | |||||||||| |||| ||| ||||||||  || |||  |||||||||    
T  11397889 ctttcgcaccgatttccgacccaccaaaggtggacgactaatccgactcatgcgtagaggcatacgcattggccaaacgtt-gttcccctcggaatcgaa 11397987  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||| ||||||||| |||  ||||| ||||||||||||||    
T  11397988 cccggtattctccggatacatccttggaaggagctccttg 11398027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 395 - 534
Target Start/End: Complemental strand, 16956574 - 16956435
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||| ||||||||| ||||||||| ||   |||||||| |||||| | |||||||||||||||||||||||||||| ||  ||| | ||| ||||    
T  16956574 ctttcgcactggtttccgacccaccaaaggtgagtgactaatccggctcgtgcgtagaggcatgcgcactggtcaaacgttgttacccctgagaaccgaa 16956475  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    | || ||||| |||  || |||||| ||||||||||||||    
T  16956474 cacggtattccccgggtacgtccttggaaggagctccttg 16956435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 395 - 534
Target Start/End: Complemental strand, 26325920 - 26325781
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||||||| ||||||| | ||||||||||||| |||||  | ||||||||||||||||||  |||  ||| ||  | | ||||||||||    
T  26325920 ctttcgcaccggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactgaccaagtgttgttcccgctgggaatcgaa 26325821  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    ||||||||||  || ||| ||||||  |||||||||||||    
T  26325820 cccgatattcctcggatacgtccttgaaaggagctccttg 26325781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 395 - 534
Target Start/End: Complemental strand, 34719884 - 34719745
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||||||||| |||||||| ||||||||| ||  ||||||||||| |||| | ||||||||||||||||||||||| |||||||  |   ||||||||||    
T  34719884 ctttcgcaccagtttccgacccaccaaaggtgagcgactaatctgactcgtgcgtagaggcatgcgcactggtcaagcgttattcccagtgggaatcgaa 34719785  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||  ||||| ||   || |||||| ||||||||||||||    
T  34719784 cccagtattccccaggtacgtccttggaaggagctccttg 34719745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 395 - 497
Target Start/End: Original strand, 17642004 - 17642106
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||||||||| |||||||| ||||||||| ||||||||||||| |||||| | ||||||||||||||||||| |||  ||| ||  ||| ||||||||||    
T  17642004 ctttcgcaccagtttccgacccaccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaa 17642103  T
Q  495 ccc 497  Q
    |||    
T  17642104 ccc 17642106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 395 - 532
Target Start/End: Original strand, 33004015 - 33004152
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||| ||| ||||||  | |||  |||||||| |||||| | ||||||||||||||||||| ||| | || ||| ||| || |||||||    
T  33004015 ctttcgcaccggttttcgacccaccattggtgggtgactaatccggctcgtgcgtagaggcatgcgcactggccaagcattgtttcccctggaaatcgaa 33004114  T
Q  495 cccgatattctccgaataagtccttcgaaggagctcct 532  Q
     ||||||||| ||| ||| |||||| ||||||||||||    
T  33004115 tccgatattccccggatacgtccttggaaggagctcct 33004152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 395 - 466
Target Start/End: Original strand, 4581682 - 4581753
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactgg 466  Q
    ||||||||||||||||||| ||||||||| |||||||||| || |||||| | |||||||||||||||||||    
T  4581682 ctttcgcaccggtttccgacccaccaaaggtggacgactattccggctcgtgcgtagaggcatgcgcactgg 4581753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 395 - 534
Target Start/End: Complemental strand, 5504139 - 5504000
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||||| |||||||||||| ||| ||||| ||||||||||||| |||||  | ||||||||||| |||||  |||| |||| ||||||| | ||||||||    
T  5504139 ctttcgtaccggtttccgacccatcaaaggtggacgactaatccggctcatgcgtagaggcatgtgcactaatcaagcgttgttttccctgagaatcgaa 5504040  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    || ||||||| ||  ||| || ||  ||||||||||||||    
T  5504039 cctgatattccccagatacgttctcggaaggagctccttg 5504000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 395 - 534
Target Start/End: Complemental strand, 10422896 - 10422757
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||||||||||||||||||   ||||||| ||||||||||||| |||||  | ||||||||||||||||||| |||  ||| ||   ||  | |||||||    
T  10422896 ctttcgcaccggtttccgacttaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttcctcctagaaatcgaa 10422797  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||| ||||| ||||||| ||| || ||||||||||||||    
T  10422796 cccggtattccccgaatacgtcattggaaggagctccttg 10422757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 395 - 534
Target Start/End: Original strand, 40288477 - 40288616
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||| |||| ||||||||| ||||||| ||||  ||||||||| |||||| | ||||||||||||  ||||| ||| |||| ||  ||| || |||||||    
T  40288477 cttttgcactggtttccgacccaccaaggatgagcgactaatccggctcgtgtgtagaggcatgcatactggccaaccgttgttccccctggaaatcgaa 40288576  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||| ||||| ||||||| |||||| ||| ||||||||||    
T  40288577 cccggtattccccgaatacgtccttggaaagagctccttg 40288616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 395 - 524
Target Start/End: Complemental strand, 26660245 - 26660117
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||||||| ||||||||| ||| ||||||||| |||||  | ||||||||||||| |||| ||||| ||| ||  ||  || |||||||    
T  26660245 ctttcgcaccggtttccgacccaccaaaggtgg-cgactaatccggctcatgcgtagaggcatgcgtactgatcaaatgttgttccccgtggaaatcgaa 26660147  T
Q  495 cccgatattctccgaataagtccttcgaag 524  Q
    |||| ||||| ||||||| ||| |||||||    
T  26660146 cccggtattccccgaatacgtcattcgaag 26660117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 395 - 466
Target Start/End: Original strand, 12036743 - 12036815
Alignment:
Q  395 ctttcgcaccggttt-ccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactgg 466  Q
    ||||||||| ||||| |||||||||||||| ||||||| |||||||||||| | |||||||||||||||||||    
T  12036743 ctttcgcactggttttccgatccaccaaaggtggacgattaatctggctcgtgcgtagaggcatgcgcactgg 12036815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 398 - 534
Target Start/End: Original strand, 17092480 - 17092616
Alignment:
Q  398 tcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaaccc 497  Q
    ||||||||||||| |||| ||||||| ||||||||||||| |||||| | |||||||||| | |||||| ||| |||| ||| ||| |  |||||||| |    
T  17092480 tcgcaccggtttctgatctaccaaaggtggacgactaatccggctcgtgcgtagaggcatacacactggccaatcgttgtttcccctgaaaatcgaactc 17092579  T
Q  498 gatattctccgaataagtccttcgaaggagctccttg 534  Q
    ||||||  ||||||| |||| |  |||||||| ||||    
T  17092580 gatatttcccgaatacgtccatgaaaggagcttcttg 17092616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 395 - 475
Target Start/End: Original strand, 50371834 - 50371914
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgtt 475  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||| | | ||||| ||||||| ||||| ||| ||||    
T  50371834 ctttcgcaccggtttccgatccaccaaagatgggcgactaatccggcttgtgcgtagaagcatgcgtactggccaagcgtt 50371914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 395 - 534
Target Start/End: Original strand, 2980931 - 2981070
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||| ||||||| |||| ||| |||||||||||||| | |||| | |||||||||||| |||||| |||  ||| ||  | | ||||||||||    
T  2980931 ctttcgcaccgatttccgacccactaaacatggacgactaatccgactcgtgcgtagaggcatgcacactggccaagtgttgttcccgctgggaatcgaa 2981030  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||  ||||| ||| ||| |||| | ||||||||||||||    
T  2981031 cccagtattccccggatacgtccctggaaggagctccttg 2981070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 395 - 534
Target Start/End: Complemental strand, 18915975 - 18915836
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||||| | ||||||| | ||  ||||||||| |||||| | |||||||||||| |||||| |||  ||| ||  ||| ||||||||||    
T  18915975 ctttcgcaccggtttccaacccaccaatggtgagcgactaatccggctcgtgcgtagaggcatgcacactggccaagtgttgttccccctgggaatcgaa 18915876  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||| ||||| |||  || |||||| |||| |||||||||    
T  18915875 cccggtattccccgggtacgtccttggaagaagctccttg 18915836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 395 - 504
Target Start/End: Complemental strand, 37339928 - 37339818
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttcccc-gggaatcga 493  Q
    ||||||||||||||||| | ||||||||| ||| ||||||||| |||||| | || |||||||||||||||| ||| |||| |   |||| |||||||||    
T  37339928 ctttcgcaccggtttccaacccaccaaaggtgggcgactaatccggctcgtgcgttgaggcatgcgcactggccaagcgttgtccccccctgggaatcga 37339829  T
Q  494 acccgatattc 504  Q
    ||||| |||||    
T  37339828 acccggtattc 37339818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 405 - 534
Target Start/End: Original strand, 33418125 - 33418254
Alignment:
Q  405 ggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattc 504  Q
    ||||||||| | ||||||| ||||||||||||| |||||| |  |||||||||||||||||| ||| |||| |   |||  ||||||||| ||| |||||    
T  33418125 ggtttccgaccgaccaaaggtggacgactaatccggctcgtgcatagaggcatgcgcactggccaagcgttgtcccccctaggaatcgaatccggtattc 33418224  T
Q  505 tccgaataagtccttcgaaggagctccttg 534  Q
    ||||  || ||| || ||||||||||||||    
T  33418225 tccgggtacgtctttggaaggagctccttg 33418254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 395 - 475
Target Start/End: Complemental strand, 44969772 - 44969692
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgtt 475  Q
    ||||| ||||||||||||||||||||| ||||||||||||||| |||||  | |||| ||||||| |||||| ||| ||||    
T  44969772 ctttcacaccggtttccgatccaccaatgatggacgactaatccggctcatgcgtaggggcatgcacactggccaagcgtt 44969692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 430 - 534
Target Start/End: Original strand, 48798105 - 48798209
Alignment:
Q  430 gactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattctccgaataagtccttcgaaggagct 529  Q
    |||||||| |||||  | ||||||||||||||||| ||||| |||| ||  ||| || ||||||||||||||||| ||| ||| ||| || |||||||||    
T  48798105 gactaatccggctcatgcgtagaggcatgcgcactagtcaagcgttgttccccctggaaatcgaacccgatattccccggatacgtcattggaaggagct 48798204  T
Q  530 ccttg 534  Q
    |||||    
T  48798205 ccttg 48798209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 395 - 534
Target Start/End: Original strand, 17358471 - 17358610
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||||| | ||||||| || |||| ||||||| || ||||||| |||||  | ||| ||||||||||| ||||||| |||| || |||| | ||||||||    
T  17358471 ctttcgtagcggtttctgacccactaaagatgaacaactaatcgggctcatgcgtaaaggcatgcgcattggtcaagcgttgttctccctgagaatcgaa 17358570  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||| ||||| || |||| ||||||  || ||||||||||    
T  17358571 cccggtattccccaaatacgtccttgaaatgagctccttg 17358610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 395 - 534
Target Start/End: Original strand, 45361882 - 45362021
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||||||| |||| |||| || |||||||||| ||||   | |||| |||||||||||||| ||| |||| ||   || | ||||||||    
T  45361882 ctttcgcaccggtttccgacccactaaaggtgaacgactaatccggcttatgcgtagtggcatgcgcactggccaagcgttgttcctcctgagaatcgaa 45361981  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||| ||||| | |  || |||||| ||||||||||||||    
T  45361982 cccggtattcccagggtacgtccttggaaggagctccttg 45362021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 395 - 464
Target Start/End: Complemental strand, 6899666 - 6899597
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcact 464  Q
    ||||||||||||||||||||||| ||||| ||| ||||||||| |||| | | ||| |||||||||||||    
T  6899666 ctttcgcaccggtttccgatccatcaaaggtgggcgactaatccggcttgtgcgtaaaggcatgcgcact 6899597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 395 - 475
Target Start/End: Original strand, 10172971 - 10173051
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgtt 475  Q
    ||||||||||||||||||| ||||||||| ||| ||| ||||| |||||  | ||||||||||| ||||||| ||| ||||    
T  10172971 ctttcgcaccggtttccgacccaccaaaggtgggcgagtaatccggctcatgcgtagaggcatgggcactggccaagcgtt 10173051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 395 - 475
Target Start/End: Complemental strand, 14357863 - 14357783
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgtt 475  Q
    ||||||||||||||||||| ||| ||| | |  |||| ||||| || ||| | ||||||||||||||||||||||||||||    
T  14357863 ctttcgcaccggtttccgacccatcaatggtaaacgattaatccggttcgtgcgtagaggcatgcgcactggtcaaacgtt 14357783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 395 - 475
Target Start/End: Complemental strand, 16263653 - 16263573
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgtt 475  Q
    ||||||||||||||||||||||| ||||  |||||||||| || ||||   | ||||||||||||||||||| ||| ||||    
T  16263653 ctttcgcaccggtttccgatccatcaaaagtggacgactattccggcttatgcgtagaggcatgcgcactggccaagcgtt 16263573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 395 - 475
Target Start/End: Original strand, 33498839 - 33498919
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgtt 475  Q
    |||||| |||| ||| ||||||| ||||| ||||||||||||| |||||  | ||||||||||||||||||| ||| ||||    
T  33498839 ctttcgtaccgctttacgatccatcaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgtt 33498919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 395 - 534
Target Start/End: Original strand, 30927727 - 30927866
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||| ||||||||||| || ||||||||  ||||||||||||| |||||  | |||||||||||| || ||| ||| |||| ||  | | || |||||||    
T  30927727 cttttgcaccggtttctgacccaccaaaagtggacgactaatccggctcatgcgtagaggcatgcacattggccaagcgttgttccctctggaaatcgaa 30927826  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||||||||  ||   || |||||| ||||||||||||||    
T  30927827 cccgatatttcccaggtacgtccttggaaggagctccttg 30927866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 395 - 534
Target Start/End: Original strand, 31576547 - 31576686
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||| ||||||||||||||  || ||||||||||||||||| | |||||  | |||||||||  |||| ||| ||| | || ||| ||| | ||||||||    
T  31576547 cttttgcaccggtttccgacacatcaaagatggacgactaagccggctcatgcgtagaggcacacgcattggccaagcattgtttcccctgagaatcgaa 31576646  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||| |||| || | ||| |||||| ||| ||||||||||    
T  31576647 cccggtattttcgggatacgtccttagaatgagctccttg 31576686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 395 - 478
Target Start/End: Original strand, 45726433 - 45726516
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttatt 478  Q
    |||||||||| || ||||||||||||||| || |||||||||| |||||  | |||||| ||| |||||||| |||| ||||||    
T  45726433 ctttcgcaccagtctccgatccaccaaaggtgaacgactaatccggctcatgcgtagagacatacgcactggccaaatgttatt 45726516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 405 - 534
Target Start/End: Original strand, 14254278 - 14254407
Alignment:
Q  405 ggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattc 504  Q
    ||||||||| ||| ||||| ||||||||||||| |||||  | ||| ||||||||| ||||| ||| |||| ||  ||| |  |||||||| || |||||    
T  14254278 ggtttccgacccatcaaaggtggacgactaatccggctcatgcgtaaaggcatgcgtactggccaagcgttgttccccctgaaaatcgaactcggtattc 14254377  T
Q  505 tccgaataagtccttcgaaggagctccttg 534  Q
     ||||||| |||||| ||| ||| ||||||    
T  14254378 cccgaatacgtccttggaatgagttccttg 14254407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 395 - 472
Target Start/End: Complemental strand, 17389879 - 17389802
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaac 472  Q
    ||||||||||||||||||| ||| ||   ||||||||||||||  ||||  | || ||||||||||||||||||||||    
T  17389879 ctttcgcaccggtttccgacccatcagcaatggacgactaatccagctcatgcgtggaggcatgcgcactggtcaaac 17389802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 443
Target Start/End: Original strand, 892302 - 892350
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctc 443  Q
    ||||||||||| ||||||||||||||||| ||| ||||||||| |||||    
T  892302 ctttcgcaccgatttccgatccaccaaaggtgggcgactaatccggctc 892350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 416 - 504
Target Start/End: Complemental strand, 31152803 - 31152715
Alignment:
Q  416 caccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattc 504  Q
    |||||||| |||||||||||| || |||| | ||||||||| ||||||||  ||| |||||||  ||| || ||||||||||| |||||    
T  31152803 caccaaaggtggacgactaatttgactcgtgtgtagaggcacgcgcactgaccaagcgttattcccccgggaaatcgaacccggtattc 31152715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 475
Target Start/End: Complemental strand, 50095012 - 50094932
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgtt 475  Q
    |||| |||||||||||||| |||| || | ||||||||||||| | |||  | ||||| ||||||| ||||||||||||||    
T  50095012 cttttgcaccggtttccgacccactaatggtggacgactaatccgactcatgcgtagaagcatgcgtactggtcaaacgtt 50094932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 443
Target Start/End: Complemental strand, 51437565 - 51437517
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctc 443  Q
    ||||||||||||||||||| ||||||||| |||| |||||||| |||||    
T  51437565 ctttcgcaccggtttccgacccaccaaaggtggatgactaatccggctc 51437517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 534
Target Start/End: Original strand, 15238106 - 15238245
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||||| |||||||||| | ||||||||| ||  |||||||| ||  ||| | |||||||||||| || ||| ||| ||||  |  ||| ||||||||||    
T  15238106 ctttcgaaccggtttccaacccaccaaaggtgagcgactaatatgattcgtgcgtagaggcatgctcattggccaagcgttgctccccctgggaatcgaa 15238205  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||||||||| |    || |||||| ||||||||||||||    
T  15238206 cccgatattccctaggtacgtccttggaaggagctccttg 15238245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 534
Target Start/End: Original strand, 32150922 - 32151061
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||||||| |||||| ||| ||| ||||| ||  ||||||||  |||||  | ||| ||||||||||||||  |||| ||| ||  ||| || |||||||    
T  32150922 ctttcgcatcggttttcgacccatcaaaggtgagcgactaattcggctcatgcgtaaaggcatgcgcactgaccaaatgttgttccccctggaaatcgaa 32151021  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    || |||||||  |||| | |||||| ||||||||||||||    
T  32151022 cctgatattcctcgaaaacgtccttggaaggagctccttg 32151061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 430 - 504
Target Start/End: Original strand, 28324615 - 28324689
Alignment:
Q  430 gactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattc 504  Q
    |||||||| |||||  | ||||||||||||||||||  |||  ||| ||| ||| ||||||||||||||||||||    
T  28324615 gactaatccggctcatgcgtagaggcatgcgcactgaccaagtgttgtttccccggggaatcgaacccgatattc 28324689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 528
Target Start/End: Complemental strand, 15466073 - 15465940
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||||| | |||||||||| ||||||||| ||  |||| |||| | |||| | ||||||||||| ||||||  ||| |||| ||  ||| || |||||||    
T  15466073 ctttcgtatcggtttccgacccaccaaaggtgagcgaccaatcagactcgtgcgtagaggcatgtgcactgaccaagcgttgttccccctggaaatcgaa 15465974  T
Q  495 cccgatattctccgaataagtccttcgaaggagc 528  Q
    || | ||||| || |||| |||||| ||||||||    
T  15465973 cctggtattccccaaatacgtccttggaaggagc 15465940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 453 - 534
Target Start/End: Original strand, 34334353 - 34334434
Alignment:
Q  453 ggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||||||||||||| |||  ||| ||  ||| |||||||||||||| ||||| ||| ||| |||||| ||| ||||||||||    
T  34334353 ggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccggatacgtccttggaatgagctccttg 34334434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 436
Target Start/End: Original strand, 35211172 - 35211213
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaat 436  Q
    ||||| ||||||||||||| ||||||||| ||||||||||||    
T  35211172 ctttcacaccggtttccgacccaccaaaggtggacgactaat 35211213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 464
Target Start/End: Original strand, 38791610 - 38791679
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcact 464  Q
    |||||| | ||||||  |||||| ||||||||||||||||||  |||||  | |||||||||||||||||    
T  38791610 ctttcgtatcggtttttgatccatcaaagatggacgactaattcggctcatgcgtagaggcatgcgcact 38791679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 455 - 536
Target Start/End: Complemental strand, 51437517 - 51437436
Alignment:
Q  455 catgcgcactggtcaaacgttattttccccgggaatcgaacccgatattctccgaataagtccttcgaaggagctccttgtc 536  Q
    |||||||||||||||| |||| ||  ||  ||||||||||||||||||||  || ||| ||||||  ||||||||| |||||    
T  51437517 catgcgcactggtcaagcgttgttccccatgggaatcgaacccgatattcctcggatacgtccttgaaaggagctcattgtc 51437436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 486 - 534
Target Start/End: Original strand, 892388 - 892436
Alignment:
Q  486 ggaatcgaacccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    ||||||||||||| ||||| ||||||| ||||||  |||||||||||||    
T  892388 ggaatcgaacccggtattccccgaatacgtccttgaaaggagctccttg 892436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 415 - 475
Target Start/End: Original strand, 44716235 - 44716295
Alignment:
Q  415 ccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgtt 475  Q
    |||||||| |||||||||||||||| |||  |  || ||||||||||||| ||||||||||    
T  44716235 ccaccaaaaatggacgactaatctgactcatgcataaaggcatgcgcactagtcaaacgtt 44716295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 395 - 475
Target Start/End: Original strand, 46929738 - 46929818
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgtt 475  Q
    |||||||| |||||| ||||||| ||||  ||||||||||||| |||||  | || |||||||||||| ||| ||| ||||    
T  46929738 ctttcgcatcggttttcgatccatcaaaagtggacgactaatccggctcatgtgtggaggcatgcgcattggccaagcgtt 46929818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 80; Significance: 3e-37; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 395 - 534
Target Start/End: Complemental strand, 224427 - 224288
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||||| | ||||||| ||| |||||| |||||||||||| |||| | || |||||    
T  224427 ctttcgcaccggtttccgacccaccaaagatggacgactaatccggctcgtgcgtagaggtatgtgcactgatcaaacgttattctccctgagattcgaa 224328  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||||||||||||||||| |||||| ||||  ||||||||    
T  224327 cccgatattctccgaatacgtccttagaagatgctccttg 224288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 396 - 534
Target Start/End: Complemental strand, 186626 - 186489
Alignment:
Q  396 tttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaac 495  Q
    |||| ||||||||||||| |||| ||||||| |||||||||| |||||| | ||||||||||| ||||||  ||||| ||||| | ||| | ||||||||    
T  186626 tttcacaccggtttccgacccactaaagatgaacgactaatccggctcgtgcgtagaggcatgtgcactgaccaaacattattct-ccctgaaatcgaac 186528  T
Q  496 ccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||||||||||| ||||  ||||| ||||| ||||||||    
T  186527 ccgatattctccaaatacatccttagaaggtgctccttg 186489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 72; Significance: 2e-32; HSPs: 66)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 395 - 534
Target Start/End: Complemental strand, 24166562 - 24166423
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||||||||||| ||||| |||  ||||||||||||||| | ||||||||||||||||||| |||||||| ||| ||  ||||||||||    
T  24166562 ctttcgcaccggtttccgatccatcaaaggtgggtgactaatctggctcgtgcgtagaggcatgcgcactggccaaacgttgtttcccttgggaatcgaa 24166463  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||  ||||| |||| || |||||| ||||||||||||||    
T  24166462 cccagtattccccgagtacgtccttggaaggagctccttg 24166423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 396 - 534
Target Start/End: Complemental strand, 33647832 - 33647694
Alignment:
Q  396 tttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaac 495  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| ||| | ||||||| ||| ||||||||||| |||| || |||| || ||||||||    
T  33647832 tttcgcaccggtttccgatccaccaaagatgaacgactaatctggttcgtgcgtagaggaatgtgcactggtcaagcgttgttctccctggaaatcgaac 33647733  T
Q  496 ccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    ||| ||||| ||  ||| ||||||  |||||||||||||    
T  33647732 ccggtattccccagatacgtccttgaaaggagctccttg 33647694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 395 - 534
Target Start/End: Complemental strand, 29895899 - 29895760
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||||||| ||||||| | ||||||||||||| |||||  | ||||||||||||||||||| |||  ||| ||  ||| ||||||||||    
T  29895899 ctttcgcaccggtttccgaaccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaa 29895800  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||| ||||| ||| ||| |||||| ||||||||||||||    
T  29895799 cccggtattccccggatacgtccttggaaggagctccttg 29895760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 395 - 534
Target Start/End: Original strand, 36145214 - 36145353
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||||||||||||||||||| || ||||| ||||||||||||| |||||  | |||||||||||||||||| |||| |||| ||| ||| ||||||||||    
T  36145214 ctttcgcaccggtttccgattcatcaaaggtggacgactaatccggctcatgtgtagaggcatgcgcactgatcaagcgttgtttcccctgggaatcgaa 36145313  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||| ||||| |||  || |||||| ||| ||||||||||    
T  36145314 cccggtattccccgggtacgtccttggaatgagctccttg 36145353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 395 - 556
Target Start/End: Complemental strand, 38075545 - 38075384
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||||||| |||||||||| ||||||||| ||||| | ||||  |||||  | ||||||||||||||||||| ||| |||| ||| ||| | ||||||||    
T  38075545 ctttcgcatcggtttccgacccaccaaaggtggacaattaattcggctcatgcgtagaggcatgcgcactggccaagcgttgtttcccctgagaatcgaa 38075446  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttgtcgaaggatcccaaacatcttg 556  Q
    |||| ||||||||||||| |||||| |||||| ||||||| ||  ||| |||||||| ||||    
T  38075445 cccggtattctccgaatacgtccttggaaggaactccttgccgctggagcccaaacaacttg 38075384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 395 - 556
Target Start/End: Complemental strand, 53599172 - 53599011
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||||||||||||||||||||||| |||| || |||| ||||| |||||  | ||||||||||||||||||| |||||||| ||   || ||||||||||    
T  53599172 ctttcgcaccggtttccgatccactaaaggtgaacgattaatccggctcatgcgtagaggcatgcgcactggccaaacgttgttcctcctgggaatcgaa 53599073  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttgtcgaaggatcccaaacatcttg 556  Q
    |||| ||||| |||  || |||||| |||||||||||||| | | ||| |||||||| ||||    
T  53599072 cccggtattccccgggtacgtccttggaaggagctccttgccaatggagcccaaacaacttg 53599011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 395 - 534
Target Start/End: Complemental strand, 38166139 - 38166000
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||||||| ||||||||| ||| ||||||||| |||||| | |||||| |||||||||||| ||| |||| ||  ||| ||||||| ||    
T  38166139 ctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagagccatgcgcactggccaagcgttgttccccctgggaatccaa 38166040  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||  ||||| ||| ||| |||||| ||||||||||||||    
T  38166039 cccagtattccccggatacgtccttggaaggagctccttg 38166000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 395 - 534
Target Start/End: Complemental strand, 52950194 - 52950055
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||||||| |||||||||| ||||||||| |||||||||||||||| ||  | |||||| |||||||||||| ||| |||| ||  ||| ||||||||||    
T  52950194 ctttcgcatcggtttccgacccaccaaaggtggacgactaatctggttcatgtgtagagtcatgcgcactggccaagcgttgttccccctgggaatcgaa 52950095  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||||||||| ||   || |||||| ||||||||||||||    
T  52950094 cccgatattccccaggtacgtccttggaaggagctccttg 52950055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 396 - 534
Target Start/End: Original strand, 40780861 - 40780999
Alignment:
Q  396 tttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaac 495  Q
    |||||||||||||||||| ||||||||| ||||||||||||| |||||  | ||||||||||||||||||  ||| |||| ||  ||  | |||||||||    
T  40780861 tttcgcaccggtttccgacccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactgaccaagcgttgttccccttgagaatcgaac 40780960  T
Q  496 ccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||||||| |||||||| ||||||  ||| |||||||||    
T  40780961 ccgatattttccgaatacgtccttaaaagaagctccttg 40780999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 395 - 505
Target Start/End: Complemental strand, 16450412 - 16450302
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||||||| | ||||||| |||||||||||||||||||  | ||||||||||| ||||||| ||| |||| ||  ||| ||||||||||    
T  16450412 ctttcgcaccggtttccgacctaccaaaggtggacgactaatctggctcatgcgtagaggcatgtgcactggccaagcgttgttccccctgggaatcgaa 16450313  T
Q  495 cccgatattct 505  Q
    ||| |||||||    
T  16450312 cccaatattct 16450302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 395 - 504
Target Start/End: Complemental strand, 10541127 - 10541019
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||||||||||| ||||| ||| ||| |||||||||||| | |||||||||||| |||||| ||| |||| ||| ||| || |||||||    
T  10541127 ctttcgcaccggtttccgatccatcaaaggtgg-cgattaatctggctcgtgcgtagaggcatgcacactggccaagcgttgtttcccctggaaatcgaa 10541029  T
Q  495 cccgatattc 504  Q
    ||||||||||    
T  10541028 cccgatattc 10541019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 395 - 534
Target Start/End: Complemental strand, 47078570 - 47078431
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||| ||||||||| ||||||| | ||  ||||||||| |||||| | ||||||||||| ||||||| ||| |||| ||  ||| ||||||||||    
T  47078570 ctttcgcactggtttccgacccaccaatggtgagcgactaatccggctcgtgcgtagaggcatgtgcactggccaagcgttgttccccctgggaatcgaa 47078471  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||| ||||| |||  || |||||| ||||||||||||||    
T  47078470 cccggtattccccgggtacgtccttggaaggagctccttg 47078431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 396 - 534
Target Start/End: Complemental strand, 7742036 - 7741898
Alignment:
Q  396 tttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaac 495  Q
    ||||||||| |||| |||| ||||||||||||||||||||||||| ||| | ||||||||||| ||||||| ||| |||| ||  ||| | || | ||||    
T  7742036 tttcgcaccagttttcgattcaccaaagatggacgactaatctggatcgtgcgtagaggcatgtgcactggccaagcgttgttacccctgagattggaac 7741937  T
Q  496 ccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||||||||  |||||| || |||  |||||||||||||    
T  7741936 ccgatattcctcgaatacgtacttgaaaggagctccttg 7741898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 395 - 524
Target Start/End: Original strand, 3159468 - 3159597
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||| |||||||||||||| ||||||| | ||  |||||||||||||||| | ||||||||||||||||||| ||| |||| ||  ||| || | |||||    
T  3159468 cttttgcaccggtttccgacccaccaatggtgagcgactaatctggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccctggaagtcgaa 3159567  T
Q  495 cccgatattctccgaataagtccttcgaag 524  Q
    |||| ||||||||| ||| |||||| ||||    
T  3159568 cccggtattctccggatacgtccttggaag 3159597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 401 - 534
Target Start/End: Complemental strand, 8889128 - 8888995
Alignment:
Q  401 caccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgat 500  Q
    ||||||||||||| ||||||||| ||||||||||||| |||||  | |||||| |||||||||||  |||  ||| ||  |||  ||||||||||||| |    
T  8889128 caccggtttccgacccaccaaaggtggacgactaatccggctcatgcgtagagccatgcgcactgcccaagtgttgttccccctaggaatcgaacccggt 8889029  T
Q  501 attctccgaataagtccttcgaaggagctccttg 534  Q
    |||| ||| ||| |||||| ||||||||||||||    
T  8889028 attccccggatacgtccttagaaggagctccttg 8888995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 397 - 529
Target Start/End: Complemental strand, 21429411 - 21429279
Alignment:
Q  397 ttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacc 496  Q
    ||||||||||||||||| ||||||||| |||||||||| |||| |||| | |||||||||||||||||||  ||||||| ||  |||    |||||||||    
T  21429411 ttcgcaccggtttccgacccaccaaaggtggacgactagtctgactcgtgcgtagaggcatgcgcactggctaaacgttgttccccctaaaaatcgaacc 21429312  T
Q  497 cgatattctccgaataagtccttcgaaggagct 529  Q
    ||||||||  || ||| ||| || |||||||||    
T  21429311 cgatattcctcggatacgtctttggaaggagct 21429279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 395 - 534
Target Start/End: Original strand, 5472847 - 5472986
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||||||||| |||| ||| ||||||||| ||| ||||||||| |||||| | ||||||||||||||||||| ||| |||| ||| ||| | ||||| ||    
T  5472847 ctttcgcaccagttttcgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgtttcccctgagaatcaaa 5472946  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    || | ||||| ||| ||| ||||||  || ||||||||||    
T  5472947 cctggtattccccggatacgtccttgaaatgagctccttg 5472986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 395 - 534
Target Start/End: Complemental strand, 20128421 - 20128282
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||||||||||||||| || ||||||| | |||||||||||||| ||||| | ||| ||||||||||||||| ||| | || ||  ||| | ||||||||    
T  20128421 ctttcgcaccggtttctgacccaccaatggtggacgactaatctagctcgtgcgtaaaggcatgcgcactggccaagcattgttccccctgagaatcgaa 20128322  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||  ||||| ||| ||| |||||| |||||| |||||||    
T  20128321 cccagtattccccggatacgtccttggaaggaactccttg 20128282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 398 - 534
Target Start/End: Original strand, 1940779 - 1940912
Alignment:
Q  398 tcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaaccc 497  Q
    |||||||||||| ||| ||||||||| ||| ||||||||| |||||| | ||||||||||||||||    ||| |||| ||  ||| |||||||||||||    
T  1940779 tcgcaccggttttcgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcac---ccaagcgttgttccccctgggaatcgaaccc 1940875  T
Q  498 gatattctccgaataagtccttcgaaggagctccttg 534  Q
    ||||||  |||  || |||||| ||||||||||||||    
T  1940876 gatatttcccgggtacgtccttggaaggagctccttg 1940912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 406 - 508
Target Start/End: Complemental strand, 3507371 - 3507270
Alignment:
Q  406 gtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattct 505  Q
    |||||||||||||||||| ||||||||||||| |||||| | ||||||||| ||||||| | ||| ||||  || ||  |||||||||||||||||||||    
T  3507371 gtttccgatccaccaaaggtggacgactaatccggctcgtgtgtagaggcacgcgcactagccaagcgtt-gttcccttgggaatcgaacccgatattct 3507273  T
Q  506 ccg 508  Q
    |||    
T  3507272 ccg 3507270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 425 - 534
Target Start/End: Complemental strand, 1446908 - 1446799
Alignment:
Q  425 tggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattctccgaataagtccttcgaag 524  Q
    ||||||||||||| |||||  | ||||||||||||||||||| |||  ||| ||  ||| |||||||||||||| ||||| ||| ||| |||||| ||||    
T  1446908 tggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccggatacgtccttggaag 1446809  T
Q  525 gagctccttg 534  Q
    ||||||||||    
T  1446808 gagctccttg 1446799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 395 - 524
Target Start/End: Original strand, 15732447 - 15732576
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||||||||||||||||||||  |||||||||| || || | ||||||||||| ||||||| |||  ||| ||  ||    ||||||||    
T  15732447 ctttcgcaccggtttccgatccaccaaagatgagcgactaatctagcccgtgcgtagaggcatgtgcactggccaagtgttgttccccatatgaatcgaa 15732546  T
Q  495 cccgatattctccgaataagtccttcgaag 524  Q
    |||| ||||||||| ||| |||||| ||||    
T  15732547 cccggtattctccggatacgtccttggaag 15732576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 395 - 536
Target Start/End: Original strand, 47682381 - 47682521
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||||||| ||||||||| ||| ||||||| | |||||| | |||||| |||| ||||||| ||||||||| || ||| | ||||| ||    
T  47682381 ctttcgcaccggtttccgacccaccaaaggtgggcgactaacccggctcgtgcgtagagacatgtgcactggccaaacgtta-ttcccctgagaatcaaa 47682479  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttgtc 536  Q
      | |||||||||| ||| ||| || ||||||| ||||||||    
T  47682480 ttcaatattctccggatacgtctttagaaggagttccttgtc 47682521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 395 - 475
Target Start/End: Complemental strand, 2559419 - 2559339
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgtt 475  Q
    ||||||||||||||||||| ||||||||| ||||||| ||||| |||| | | ||||||||||||||||||| ||| ||||    
T  2559419 ctttcgcaccggtttccgacccaccaaaggtggacgagtaatccggcttgtgcgtagaggcatgcgcactggccaagcgtt 2559339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 395 - 475
Target Start/End: Original strand, 7246645 - 7246725
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgtt 475  Q
    ||||||||||||||||||| ||||||||| ||| ||||||||| |||||  | ||||||||||||||||||| ||| ||||    
T  7246645 ctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgcgcactggccaagcgtt 7246725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 395 - 534
Target Start/End: Original strand, 36262766 - 36262903
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||  |||||| || ||||||||| ||| ||||||||| | |||| | ||||||||||| ||||||| ||| |||  | ||||| ||||||||||    
T  36262766 ctttcgcattggtttctgacccaccaaaggtgggcgactaatccgactcgtgcgtagaggcatgtgcactggccaagcgt--tgttccctgggaatcgaa 36262863  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||| |||||||||  || |||||| ||||||||| ||||    
T  36262864 cccggtattctccgggtacgtccttggaaggagcttcttg 36262903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 395 - 534
Target Start/End: Complemental strand, 6779323 - 6779184
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||||||| ||| ||||||| |||||||| ||||||||||||| |||||  |  |||||||||||||||||| ||   ||| ||  ||| ||||||||||    
T  6779323 ctttcgcatcgggttccgattcaccaaaggtggacgactaatccggctcatgcatagaggcatgcgcactggccaggtgttgttccccctgggaatcgaa 6779224  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||| ||||||||   || |||||| |||| |||||||||    
T  6779223 cccggtattctccaggtacgtccttggaagaagctccttg 6779184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 395 - 534
Target Start/End: Original strand, 15839934 - 15840072
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||| ||||||| | | | |||||| || ||||||||| |||||  | ||||||||||||||||||| ||||||||||| |  |  |||||||||    
T  15839934 ctttcgcactggtttccaacctatcaaagaagggcgactaatccggctcatgcgtagaggcatgcgcactggccaaacgttattct-tctaggaatcgaa 15840032  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||| ||||| || | || |||||| ||||||||||||||    
T  15840033 cccggtattccccaagtacgtccttggaaggagctccttg 15840072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 397 - 475
Target Start/End: Original strand, 295534 - 295612
Alignment:
Q  397 ttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgtt 475  Q
    ||||||||||||||  | ||||||| | |||||||||||||||| ||| | ||||||||||||||||||| ||||||||    
T  295534 ttcgcaccggtttcaaacccaccaacggtggacgactaatctggttcgtgcgtagaggcatgcgcactggccaaacgtt 295612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 396 - 530
Target Start/End: Complemental strand, 13073649 - 13073515
Alignment:
Q  396 tttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaac 495  Q
    |||||||||||||||||| ||||||||| |  ||||||||||||| ||  | ||||||| ||||||||||| ||||| || ||  ||  |||||||||||    
T  13073649 tttcgcaccggtttccgacccaccaaaggtaaacgactaatctggttcatgcgtagaggtatgcgcactggccaaacattgttccccatgggaatcgaac 13073550  T
Q  496 ccgatattctccgaataagtccttcgaaggagctc 530  Q
     || ||||||||   || |||||| ||||||||||    
T  13073549 tcggtattctccaggtacgtccttggaaggagctc 13073515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 395 - 534
Target Start/End: Complemental strand, 31588798 - 31588657
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtca--aacgttattttccccgggaatcg 492  Q
    |||||||| |||||||||||||||||||  ||  ||||||||| |||||  | |||||| |||||||||||| ||  | |||| ||| | | |||||||     
T  31588798 ctttcgcatcggtttccgatccaccaaaagtgagcgactaatccggctcatgcgtagagacatgcgcactggccaagagcgttgtttcctctgggaatca 31588699  T
Q  493 aacccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    ||||| |||||| ||||||| |||||| ||| ||||||||||    
T  31588698 aacccaatattccccgaatacgtccttagaacgagctccttg 31588657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 395 - 496
Target Start/End: Complemental strand, 14124128 - 14124027
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||||| | ||||||| | ||  ||||||||| |||||| | ||||||||||||||||||| |||| ||| ||  ||| ||||||||||    
T  14124128 ctttcgcaccggtttccaacccaccaatggtgagcgactaatccggctcgtgtgtagaggcatgcgcactggccaaatgttgttccccctgggaatcgaa 14124029  T
Q  495 cc 496  Q
    ||    
T  14124028 cc 14124027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 395 - 532
Target Start/End: Original strand, 42722576 - 42722713
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||| ||| |||| |||| || |||||||||| |||||  | ||||||||||||||||||| ||| |||| ||   || |||||| |||    
T  42722576 ctttcgcaccggttttcgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctgggaattgaa 42722675  T
Q  495 cccgatattctccgaataagtccttcgaaggagctcct 532  Q
    |||| ||||  |||  || |||||| ||||||||||||    
T  42722676 cccggtatttcccgggtacgtccttggaaggagctcct 42722713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 395 - 504
Target Start/End: Original strand, 48015072 - 48015181
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||||||||||| ||||  ||| | ||||||| |||||| | |||||||| |||||||||| ||| |||| ||  | | ||||||||||    
T  48015072 ctttcgcaccggtttccgatccatcaaaattgggctactaatccggctcgtgcgtagaggcttgcgcactggccaagcgttgttcccactgggaatcgaa 48015171  T
Q  495 cccgatattc 504  Q
    |||| |||||    
T  48015172 cccggtattc 48015181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 396 - 472
Target Start/End: Complemental strand, 14859402 - 14859326
Alignment:
Q  396 tttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaac 472  Q
    ||||||||| ||||||||  || ||||| |||| ||||||||||||||| | |||||| ||||||||||||||||||    
T  14859402 tttcgcaccagtttccgacacatcaaaggtggatgactaatctggctcgtgcgtagagacatgcgcactggtcaaac 14859326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 395 - 475
Target Start/End: Original strand, 49260664 - 49260744
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgtt 475  Q
    |||| |||||| ||||||| ||||||||| ||| ||||||||| |||||| | ||||||||||||||||||| ||| ||||    
T  49260664 cttttgcaccgatttccgacccaccaaaggtggtcgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgtt 49260744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 395 - 534
Target Start/End: Complemental strand, 43458725 - 43458586
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||||||| ||||||||||  || ||||| ||||||||||||| ||||||   ||||||||||||||||||| ||| |||| ||   || ||||||||||    
T  43458725 ctttcgcaacggtttccgactcatcaaaggtggacgactaatccggctcgtccgtagaggcatgcgcactggccaagcgttcttcctcctgggaatcgaa 43458626  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
     ||  ||||| || |||| |||||| ||| ||||| ||||    
T  43458625 tccagtattccccaaatacgtccttggaatgagcttcttg 43458586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 395 - 534
Target Start/End: Complemental strand, 55921146 - 55921007
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||||||| ||||||||| ||  ||| ||||| |||||    ||||||||||||||||||  |||  ||| ||  ||| ||||||||||    
T  55921146 ctttcgcaccggtttccgacccaccaaaggtgagcgattaatccggctcatacgtagaggcatgcgcactgaccaagtgttgttccccctgggaatcgaa 55921047  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||| ||||| |||  |  |||||| ||||||||||||||    
T  55921046 cccggtattccccgggtgcgtccttggaaggagctccttg 55921007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 396 - 470
Target Start/End: Original strand, 6032643 - 6032717
Alignment:
Q  396 tttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaa 470  Q
    |||||||||||||||||| ||||||||| | ||||||||||| |||||    ||||||||||| |||||||||||    
T  6032643 tttcgcaccggtttccgacccaccaaaggtagacgactaatccggctcattcgtagaggcatgagcactggtcaa 6032717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 395 - 472
Target Start/End: Complemental strand, 14567351 - 14567274
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaac 472  Q
    ||||||||||| ||||||| |||||||||  |  ||||||||| |||||| | ||||||||||||||||||| |||||    
T  14567351 ctttcgcaccgatttccgacccaccaaaggcgagcgactaatccggctcgtgcgtagaggcatgcgcactggccaaac 14567274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 395 - 472
Target Start/End: Original strand, 14597899 - 14597976
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaac 472  Q
    |||| |||||||||| ||||||| ||||| |||||||||||||  | ||| | ||||||||||||||||||| |||||    
T  14597899 cttttgcaccggttttcgatccatcaaaggtggacgactaatccagttcgtgcgtagaggcatgcgcactggccaaac 14597976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 429 - 529
Target Start/End: Complemental strand, 14568037 - 14567937
Alignment:
Q  429 cgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattctccgaataagtccttcgaaggagc 528  Q
    ||||||||| | |||| | ||||||| ||| ||||||||||| ||||||| |||| | |||||||||| | ||||| || |||| |||||| ||||||||    
T  14568037 cgactaatccgactcgtgcgtagaggtatgtgcactggtcaagcgttattctccctgagaatcgaacctggtattccccaaatacgtccttagaaggagc 14567938  T
Q  529 t 529  Q
    |    
T  14567937 t 14567937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 395 - 475
Target Start/End: Complemental strand, 17080155 - 17080075
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgtt 475  Q
    ||||||||||||||| ||||||| ||||| ||  ||||||||| |||||  | ||||||||||||||||||| ||| ||||    
T  17080155 ctttcgcaccggttttcgatccatcaaaggtgtgcgactaatccggctcatgcgtagaggcatgcgcactggccaagcgtt 17080075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 395 - 503
Target Start/End: Complemental strand, 29588848 - 29588740
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||||||| || ||||||| ||||||| | ||||  ||||||| |||||| | ||||||||||||||||| | ||| | || ||| ||| ||||||||||    
T  29588848 ctttcgcatcgatttccgacccaccaatggtggataactaatccggctcgtgcgtagaggcatgcgcactagccaagctttgtttcccctgggaatcgaa 29588749  T
Q  495 cccgatatt 503  Q
    |||| ||||    
T  29588748 cccggtatt 29588740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 395 - 466
Target Start/End: Complemental strand, 4738730 - 4738659
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactgg 466  Q
    ||||||||||||||||||| ||||||||| ||||||||||||   ||||  | |||||| ||||||||||||    
T  4738730 ctttcgcaccggtttccgacccaccaaaggtggacgactaattcagctcatgcgtagagacatgcgcactgg 4738659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 395 - 470
Target Start/End: Complemental strand, 14858822 - 14858747
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaa 470  Q
    |||||||||||||||| || ||| ||||| ||||||| ||||||| ||||   |||||| ||||||||||||||||    
T  14858822 ctttcgcaccggtttctgacccatcaaaggtggacgaataatctgactcgtacgtagagacatgcgcactggtcaa 14858747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 395 - 466
Target Start/End: Complemental strand, 20421885 - 20421814
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactgg 466  Q
    |||||| || ||||||||| ||| ||| ||||||||| |||||||||||  | |||||||||||||||||||    
T  20421885 ctttcgaactggtttccgacccatcaatgatggacgattaatctggctcatgcgtagaggcatgcgcactgg 20421814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 395 - 534
Target Start/End: Complemental strand, 7000631 - 7000497
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||| | ||||||||||| ||  |||||||||||||||| | |||||||||    || ||| ||| |||| || | || ||||||||||    
T  7000631 ctttcgcaccggttttcaatccaccaaag-tgagcgactaatctggctcgtgcgtagaggca----cattggccaagcgttgttcttcctgggaatcgaa 7000537  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    | || ||||| |||| || |||||| ||||||||| ||||    
T  7000536 ctcggtattccccgagtacgtccttggaaggagcttcttg 7000497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 395 - 465
Target Start/End: Complemental strand, 18531631 - 18531561
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactg 465  Q
    ||||||||||||||||||| |||| |||| ||||||| |||||||| ||| |  | |||||||||||||||    
T  18531631 ctttcgcaccggtttccgacccacaaaaggtggacgaataatctggttcgtgcatggaggcatgcgcactg 18531561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 425 - 506
Target Start/End: Original strand, 8064827 - 8064908
Alignment:
Q  425 tggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattctc 506  Q
    ||||||||||||| |||||  | |||||||||||||||||||||||  ||||||  ||  |||||||||||||  |||||||    
T  8064827 tggacgactaatccggctcatgcgtagaggcatgcgcactggtcaagtgttattccccttgggaatcgaacccagtattctc 8064908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 395 - 536
Target Start/End: Complemental strand, 15829811 - 15829670
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||||||||||||||| |||||||||| | |||| |||||||| |||||  |  |||| ||||||||||||| |||  |||  || ||| |  |||| ||    
T  15829811 ctttcgcaccggtttctgatccaccaatggtggaggactaatccggctcatgcctagaagcatgcgcactggccaagtgttgattcccctgaaaatcaaa 15829712  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttgtc 536  Q
    |  ||||||||||| ||| ||||||  ||| |||||||||||    
T  15829711 ctggatattctccggatacgtccttgaaagaagctccttgtc 15829670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 395 - 504
Target Start/End: Complemental strand, 16645230 - 16645121
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||||||| |||||| || ||| ||||||||| | |||  | |||||||||||| |||||| ||| |||| || | || |  |||||||    
T  16645230 ctttcgcaccggtttccgacccaccacaggtgggcgactaatcagactcatgtgtagaggcatgcacactggccaagcgttgttcttcctgaaaatcgaa 16645131  T
Q  495 cccgatattc 504  Q
    |||| |||||    
T  16645130 cccggtattc 16645121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 407 - 508
Target Start/End: Original strand, 20532420 - 20532521
Alignment:
Q  407 tttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattctc 506  Q
    ||||||||||||||||| ||| ||||| ||| |||||  | ||||||||||||||||||| ||| |||| ||   || || |||||||| || |||||||    
T  20532420 tttccgatccaccaaaggtgggcgacttatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctggaaatcgaactcggtattctc 20532519  T
Q  507 cg 508  Q
    ||    
T  20532520 cg 20532521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 475
Target Start/End: Complemental strand, 8424666 - 8424586
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgtt 475  Q
    |||||||| || ||| ||| ||||||||||||  ||| |||| ||||||| |  |||||||||||||||||| ||||||||    
T  8424666 ctttcgcatcgattttcgacccaccaaagatgagcgattaatttggctcgtgcatagaggcatgcgcactggccaaacgtt 8424586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 400 - 504
Target Start/End: Complemental strand, 8824671 - 8824567
Alignment:
Q  400 gcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccga 499  Q
    |||||||||| ||||||| ||  ||| ||||||||||||| |||| | ||||||| |||| ||||| |||| |||| ||||| |  ||||||||| |||     
T  8824671 gcaccggttttcgatccatcagtgatagacgactaatctgcctcgtgcgtagaggtatgcacactgatcaagcgtttttttctcttggaatcgaatccgg 8824572  T
Q  500 tattc 504  Q
    |||||    
T  8824571 tattc 8824567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 464
Target Start/End: Complemental strand, 46108794 - 46108734
Alignment:
Q  404 cggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcact 464  Q
    |||||||||| ||| ||||  |||||||||||||||||||  | |||||||||||||||||    
T  46108794 cggtttccgacccatcaaaagtggacgactaatctggctcatgcgtagaggcatgcgcact 46108734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 534
Target Start/End: Complemental strand, 38168368 - 38168230
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||||| | |||| |||| || |||||||||| |||||  | ||||||||||| ||||||| ||| |||| ||   |   |||||||||    
T  38168368 ctttcgcaccggtttccaacccactaaaggtgaacgactaatccggctcatgcgtagaggcatg-gcactggccaagcgttgttcctcttaggaatcgaa 38168270  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    || | ||||| |||  || |||||| ||||||||||||||    
T  38168269 cctggtattccccgggtacgtccttggaaggagctccttg 38168230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 534
Target Start/End: Original strand, 41339395 - 41339533
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||||||||||||||  ||||  |||| | ||| ||||||||| | |||| | |||||||||| | |||||| ||| |||| ||  ||  |||| |||||    
T  41339395 ctttcgcaccggtttt-gatctgccaatggtgggcgactaatccgtctcgtgcgtagaggcatacacactggccaagcgttgttccccttgggagtcgaa 41339493  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||| |||||||||  || |||||| ||||||||||||||    
T  41339494 cccggtattctccgggtacgtccttggaaggagctccttg 41339533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 396 - 475
Target Start/End: Original strand, 48352509 - 48352588
Alignment:
Q  396 tttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgtt 475  Q
    |||||||| ||| |||||  || ||||||||||||||||||| |||||| | |  |||||||| ||||||| ||||||||    
T  48352509 tttcgcactggtctccgactcatcaaagatggacgactaatccggctcgtgtgaggaggcatgtgcactggccaaacgtt 48352588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 403 - 465
Target Start/End: Complemental strand, 54946353 - 54946291
Alignment:
Q  403 ccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactg 465  Q
    ||||||||||| ||||||| ||||| ||||||||| |||||  | ||||||||||||| ||||    
T  54946353 ccggtttccgacccaccaatgatgggcgactaatccggctcatgcgtagaggcatgcggactg 54946291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 504
Target Start/End: Complemental strand, 43468459 - 43468350
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||| ||||| ||||||  | ||| ||||||||| |||||  | ||||||  ||| ||||||| ||| |||| ||  ||| ||||||||||    
T  43468459 ctttcgcaccggtctccgacccaccactggtgggcgactaatccggctcatgcgtagagaaatgtgcactggccaagcgttgttccccctgggaatcgaa 43468360  T
Q  495 cccgatattc 504  Q
    |||| |||||    
T  43468359 cccggtattc 43468350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 504
Target Start/End: Complemental strand, 45721198 - 45721089
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||||| | |||  |||| ||||||||||||| | || | | ||||||||| ||||| ||| ||||| |||||| ||| |  ||| |||    
T  45721198 ctttcgcaccggtttccaacccattaaaggtggacgactaatccgacttgtgcgtagaggcacgcgcagtggccaaacattatttcccctgaaaatggaa 45721099  T
Q  495 cccgatattc 504  Q
    |||| |||||    
T  45721098 cccggtattc 45721089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 395 - 534
Target Start/End: Original strand, 3574447 - 3574584
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||| |||||||||||||  |||| ||| ||  ||||||||| | |||| | ||||||||||||||||||| |||  ||| || |||| |||||| |||    
T  3574447 ctttctcaccggtttccga--cacctaaggtgagcgactaatccgactcgtgcgtagaggcatgcgcactggccaagtgttgttctccctgggaattgaa 3574544  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    | || ||||| |    || |||||| ||||||||||||||    
T  3574545 ctcggtattccctaggtacgtccttggaaggagctccttg 3574584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 395 - 475
Target Start/End: Complemental strand, 21192752 - 21192672
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgtt 475  Q
    ||||||||||||||| |||  |||||||  ||| ||| ||||| | |||| | ||||||||||||||||||| | ||||||    
T  21192752 ctttcgcaccggttttcgactcaccaaatgtgggcgattaatccgactcgtgcgtagaggcatgcgcactggcccaacgtt 21192672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 395 - 439
Target Start/End: Original strand, 25406562 - 25406606
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctg 439  Q
    ||||||||||||||||||| ||| ||||| || ||||||||||||    
T  25406562 ctttcgcaccggtttccgacccatcaaaggtgaacgactaatctg 25406606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 395 - 475
Target Start/End: Original strand, 37369041 - 37369121
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgtt 475  Q
    |||||||| ||||||||||| ||||||   ||| ||||| ||| | |||| | |||||||||||| |||||| ||||||||    
T  37369041 ctttcgcatcggtttccgattcaccaatagtgggcgacttatccgactcgtgcgtagaggcatgcacactggacaaacgtt 37369121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 68; Significance: 4e-30; HSPs: 62)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 395 - 534
Target Start/End: Complemental strand, 8513627 - 8513488
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||| | ||||||||||| ||||||| ||| | || ||| |||  |||||||||    
T  8513627 ctttcgcaccggtttccgacccaccaaaggtggacgactaatctggctcgtgcgtagaggcatgtgcactggccaagcattgtttcccctaggaatcgaa 8513528  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||| ||||| |||  || |||||| ||||||||||||||    
T  8513527 cccggtattccccgggtacgtccttggaaggagctccttg 8513488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 395 - 534
Target Start/End: Complemental strand, 42086435 - 42086296
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||||||| ||||||||| ||||||||||||| |||||  | ||||||||||||||||||||||| |||| ||  ||| ||||||||||    
T  42086435 ctttcgcaccggtttccgacccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggtcaagcgttgttccccctgggaatcgaa 42086336  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||| |||||  ||  || |||||| ||||||||||||||    
T  42086335 cccggtattcctcgggtacgtccttggaaggagctccttg 42086296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 395 - 534
Target Start/End: Complemental strand, 1538539 - 1538400
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||||||| ||||||| | ||||||| ||||| |||||  | ||||||||||||||||||| |||  ||| ||  ||| ||||||||||    
T  1538539 ctttcgcaccggtttccgacccaccaatggtggacgattaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaa 1538440  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||| ||||| ||||||| |||||  ||||||||||||||    
T  1538439 cccggtattccccgaatacgtcctcggaaggagctccttg 1538400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 396 - 508
Target Start/End: Original strand, 42291505 - 42291617
Alignment:
Q  396 tttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaac 495  Q
    |||||||||||||||||||||| ||||| ||||||||||||| |||||| | ||||||||||| ||||||| ||| |||| ||  ||| ||||||| |||    
T  42291505 tttcgcaccggtttccgatccatcaaaggtggacgactaatccggctcgtgcgtagaggcatgtgcactggccaagcgttgttcaccctgggaatcaaac 42291604  T
Q  496 ccgatattctccg 508  Q
    ||| |||||||||    
T  42291605 ccggtattctccg 42291617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 395 - 534
Target Start/End: Original strand, 5731919 - 5732058
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||||||| |||| |||| || ||||||||||||||||    ||||||||||||||||||| ||| |||| ||   || ||||||||||    
T  5731919 ctttcgcaccggtttccgacccactaaaggtgaacgactaatctggctcatacgtagaggcatgcgcactggccaagcgttgttcctcctgggaatcgaa 5732018  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||| ||||| |||  || |||||| ||||||||||||||    
T  5732019 cccggtattccccgggtacgtccttggaaggagctccttg 5732058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 395 - 536
Target Start/End: Original strand, 3653913 - 3654052
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||| |||||||||| ||||||||||||| ||||||||||||| | |||| | ||||||||||||||||||||||| |||  | ||| |  |||||||||    
T  3653913 cttttgcaccggttttcgatccaccaaaggtggacgactaatccgcctcgtgcgtagaggcatgcgcactggtcaagcgt--tgttctctaggaatcgaa 3654010  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttgtc 536  Q
    |||| |||||||||  || |||||| ||| |||||| |||||    
T  3654011 cccggtattctccgggtacgtccttggaaagagctcattgtc 3654052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 395 - 505
Target Start/End: Complemental strand, 9805112 - 9805002
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||||||||| |||||||| ||||||||| ||||||||||||| |||||  | ||||||||||||||||||| ||| |||| ||  ||| ||||||||||    
T  9805112 ctttcgcacctgtttccgacccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttccccctgggaatcgaa 9805013  T
Q  495 cccgatattct 505  Q
    |||| ||||||    
T  9805012 cccggtattct 9805002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 396 - 534
Target Start/End: Complemental strand, 20525945 - 20525807
Alignment:
Q  396 tttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaac 495  Q
    |||||||||||||||||||||||||| | ||||||||||||| |||||  | |||||||||||||||||||  ||  ||| ||   || |||||||||||    
T  20525945 tttcgcaccggtttccgatccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggcgaagtgttgttccacctgggaatcgaac 20525846  T
Q  496 ccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    ||||||||| ||| |||  |||||  |||||||||||||    
T  20525845 ccgatattccccggatacatccttgaaaggagctccttg 20525807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 396 - 534
Target Start/End: Complemental strand, 37263347 - 37263210
Alignment:
Q  396 tttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaac 495  Q
    ||||||||||||||||||||||  |||| ||||||||||||| |||||| | ||||||||||||||| ||| ||| ||||  || ||| | |||||||||    
T  37263347 tttcgcaccggtttccgatccaataaaggtggacgactaatccggctcgtgcgtagaggcatgcgcattggccaagcgtt-gttcccctgagaatcgaac 37263249  T
Q  496 ccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    ||||||||| |||  || |||||| |||||| |||||||    
T  37263248 ccgatattccccgggtacgtccttagaaggaactccttg 37263210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 395 - 534
Target Start/End: Complemental strand, 24499090 - 24498952
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||  ||||| | ||||||||||||||| | ||||| ||||||   |||||||||||||||||| |||| ||||||||| |   | |||||||    
T  24499090 ctttcgcaccaatttccaacccaccaaagatggactattaatccggctcgtacgtagaggcatgcgcactgatcaagcgttatttt-cttagaaatcgaa 24498992  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||||||||||||  ||| |||||| ||||||||||||||    
T  24498991 cccgatattctccagatacgtccttggaaggagctccttg 24498952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 395 - 534
Target Start/End: Original strand, 25417182 - 25417321
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||||||||||||||| || ||||||| | |  | |||||||| ||||||   ||||||||||||||||||| ||| |||| ||  ||| ||||||||||    
T  25417182 ctttcgcaccggtttctgacccaccaatggtaaatgactaatccggctcgttcgtagaggcatgcgcactggccaagcgttgttccccctgggaatcgaa 25417281  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||| ||||| |||| || |||||| ||||||||||||||    
T  25417282 cccggtattccccgagtacgtccttggaaggagctccttg 25417321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 395 - 534
Target Start/End: Original strand, 14588616 - 14588755
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||| ||   |||||||| ||||||||||||| |||||  | ||||||||||||||||||||||| |||||||   || |  |||||||    
T  14588616 ctttcgcaccggttttcggctcaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggtcaagcgttattcctcctgaaaatcgaa 14588715  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||||||||| ||  ||| ||||||  ||| |||||||||    
T  14588716 cccgatattccccagatacgtccttgaaagaagctccttg 14588755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 395 - 534
Target Start/End: Complemental strand, 19572832 - 19572693
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||| ||||||| | ||||||| | || |||||||||| |||||  | ||||||||||||||||||| |||  ||| ||  ||| ||||||| ||    
T  19572832 ctttcgcactggtttccaacccaccaatggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatctaa 19572733  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||| ||||| ||| ||| |||||| ||||||||||||||    
T  19572732 cccggtattccccggatacgtccttggaaggagctccttg 19572693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 395 - 534
Target Start/End: Original strand, 23247351 - 23247489
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||| ||| ||| ||||| |||||||||||||||||||| | ||||||||||||  |||| |||| |||| ||   || ||||||||||    
T  23247351 ctttcgcaccggttttcga-ccatcaaaggtggacgactaatctggctcgtgcgtagaggcatgcatactgatcaagcgttgttcctcctgggaatcgaa 23247449  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||||||||| ||   || |||||| ||| ||||||||||    
T  23247450 cccgatattccccaggtacgtccttggaatgagctccttg 23247489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 395 - 534
Target Start/End: Original strand, 38897718 - 38897856
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||| ||||||||||||||||||| ||| | ||||||| |||||| | ||||||||||||||||||| ||| ||||  || ||| || |||||||    
T  38897718 ctttcgcactggtttccgatccaccaaaggtgggcaactaatccggctcgtgcgtagaggcatgcgcactggccaagcgtt-gttcccctggaaatcgaa 38897816  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||| ||||| ||  ||| ||||||  || ||||||||||    
T  38897817 cccggtattccccatatacgtccttgtaaagagctccttg 38897856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 395 - 534
Target Start/End: Original strand, 42861217 - 42861356
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||| ||||| ||||||| | ||||||| ||||| |||||  | ||||||||||||||||||| |||  ||| ||| ||  || ||| |||    
T  42861217 ctttcgcaccggtctccgacccaccaatggtggacgattaatccggctcatgcgtagaggcatgcgcactggccaagtgttgtttccctgggaaattgaa 42861316  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||||||||| ||| ||| |||||| ||| ||||||||||    
T  42861317 cccgatattccccggatatgtccttggaatgagctccttg 42861356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 395 - 504
Target Start/End: Complemental strand, 23383765 - 23383656
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||||||||| |||||||| ||||||||| |||||||||||||  ||||  | ||||||||| ||||||||| ||| |||| ||  ||| ||||||||||    
T  23383765 ctttcgcaccagtttccgacccaccaaaggtggacgactaatccagctcatgcgtagaggcaagcgcactggccaagcgttgttccccctgggaatcgaa 23383666  T
Q  495 cccgatattc 504  Q
    |||| |||||    
T  23383665 cccggtattc 23383656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 395 - 512
Target Start/End: Complemental strand, 40117523 - 40117406
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||| ||||||||||||| || |||| ||||| |||||  | ||||||||||||||||||| ||| |||| ||  ||| || |||||||    
T  40117523 ctttcgcaccggttttcgatccaccaaaggtgaacgattaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttccccctggaaatcgaa 40117424  T
Q  495 cccgatattctccgaata 512  Q
      |||||||| |||||||    
T  40117423 ttcgatattccccgaata 40117406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 395 - 475
Target Start/End: Complemental strand, 7617028 - 7616948
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgtt 475  Q
    |||||||||| ||||||||||||||||  |||||||||||||||| |||  | ||||||||||||  ||||||||||||||    
T  7617028 ctttcgcaccagtttccgatccaccaataatggacgactaatctgactcatgcgtagaggcatgcatactggtcaaacgtt 7616948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 395 - 471
Target Start/End: Complemental strand, 21375459 - 21375383
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaa 471  Q
    ||||||||| ||||||||||||| ||||||||||||||||||| | |||  | ||||| ||||||||||||||||||    
T  21375459 ctttcgcactggtttccgatccatcaaagatggacgactaatccgactcatgcgtagaagcatgcgcactggtcaaa 21375383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 395 - 534
Target Start/End: Complemental strand, 12705122 - 12704983
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||||||||||||||| || ||||||||| ||| ||||||||| || ||  | ||||| |||||| |||||||||| |||| ||   ||  |||||||||    
T  12705122 ctttcgcaccggtttctgacccaccaaaggtgggcgactaatccggttcatgcgtagaagcatgcacactggtcaagcgttgttcctcctcggaatcgaa 12705023  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||| ||||| |||  || |||||| ||||||||||||||    
T  12705022 cccggtattccccgggtacgtccttggaaggagctccttg 12704983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 415 - 534
Target Start/End: Original strand, 14974343 - 14974462
Alignment:
Q  415 ccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattctccgaataag 514  Q
    ||||||||| ||||||||||||| |||||  | ||||||||||| ||||||| |||| ||| ||  ||    |||||||||||||||||||||| ||| |    
T  14974343 ccaccaaaggtggacgactaatccggctcatgcgtagaggcatgtgcactggccaaatgttgttcccctttagaatcgaacccgatattctccggatacg 14974442  T
Q  515 tccttcgaaggagctccttg 534  Q
    ||||| ||| ||||||||||    
T  14974443 tccttagaatgagctccttg 14974462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 395 - 534
Target Start/End: Original strand, 41163459 - 41163597
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||||||||| |||||||| |||| |||| |||||||||||||  ||||  | |||||| |||| ||||||| ||||||||  || ||| ||||||||||    
T  41163459 ctttcgcaccagtttccgacccacaaaaggtggacgactaatccagctcatgcgtagagacatgtgcactggccaaacgtt-gttcccctgggaatcgaa 41163557  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||| ||||| |||  || || ||| ||||||||||||||    
T  41163558 cccggtattccccgggtacgttcttggaaggagctccttg 41163597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 395 - 478
Target Start/End: Complemental strand, 43399236 - 43399153
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttatt 478  Q
    ||||||||||||||||||| | ||||||  |||||||||||||  ||||| | ||||||||||||||||||| ||| |||||||    
T  43399236 ctttcgcaccggtttccgaccaaccaaatgtggacgactaatcctgctcgtgcgtagaggcatgcgcactggccaagcgttatt 43399153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 395 - 536
Target Start/End: Original strand, 20682616 - 20682758
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||||| | |||| |||| ||| ||| ||||| |||||| | ||||||||||||||||||| ||| |||| ||  ||| || |||| ||    
T  20682616 ctttcgcaccggtttccaacccactaaaggtggtcgattaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccctggaaatctaa 20682715  T
Q  495 cccgatattctccgaataagtccttcgaa-ggagctccttgtc 536  Q
    ||| |||||| |||  || |||||| ||| |||||||||||||    
T  20682716 cccaatattccccgggtacgtccttagaatggagctccttgtc 20682758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 407 - 505
Target Start/End: Complemental strand, 24875441 - 24875343
Alignment:
Q  407 tttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattct 505  Q
    ||||||| ||| ||||| ||||||| ||||| |||||| | |||||| ||||||||||||||||||||| || ||||   |||||||||| ||||||||    
T  24875441 tttccgacccatcaaaggtggacgattaatccggctcgtgcgtagagacatgcgcactggtcaaacgttgttctccctaagaatcgaacctgatattct 24875343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 395 - 504
Target Start/End: Complemental strand, 41801085 - 41800976
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||| ||||| ||||||| ||| |||||||| |||||||||| |||||| | |||||| |||||||| ||||||| |||| ||  ||  | ||||||||    
T  41801085 ctttcacaccgctttccgacccatcaaagatgaacgactaatccggctcgtgcgtagagacatgcgcattggtcaagcgttgttccccttgagaatcgaa 41800986  T
Q  495 cccgatattc 504  Q
    ||||||||||    
T  41800985 cccgatattc 41800976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 395 - 443
Target Start/End: Original strand, 27648424 - 27648472
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctc 443  Q
    |||||||| |||||||||||||||||||||||||||||||||| |||||    
T  27648424 ctttcgcatcggtttccgatccaccaaagatggacgactaatccggctc 27648472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 395 - 534
Target Start/End: Complemental strand, 9812980 - 9812841
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||||||||||||||| || ||||||||| ||| ||||||||| || ||  | ||||| |||||| |||||| ||| |||| ||   ||  |||||||||    
T  9812980 ctttcgcaccggtttctgacccaccaaaggtgggcgactaatccggttcatgcgtagaagcatgcacactggccaagcgttgttcctcctcggaatcgaa 9812881  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||| ||||| |||  || |||||| ||||||||||||||    
T  9812880 cccggtattccccgggtacgtccttggaaggagctccttg 9812841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 395 - 526
Target Start/End: Complemental strand, 12082016 - 12081885
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||| ||||| |||||||  |||||||| ||||||||||||  |||||| | ||||| ||||||||||||| ||| |||| ||  ||| | ||||||||    
T  12082016 ctttcacaccgatttccgactcaccaaaggtggacgactaattcggctcgtgcgtagatgcatgcgcactggccaagcgttgttccccctgagaatcgaa 12081917  T
Q  495 cccgatattctccgaataagtccttcgaagga 526  Q
    |||  ||||| ||| ||| |||||| ||||||    
T  12081916 cccagtattccccggatacgtcctttgaagga 12081885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 395 - 534
Target Start/End: Complemental strand, 12766239 - 12766100
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||||||||||||||| || ||||||||| ||| |||||||||||| ||  | |||||||||||| |||||| ||| | || ||   ||   ||||||||    
T  12766239 ctttcgcaccggtttctgacccaccaaaggtgggcgactaatctggttcatgcgtagaggcatgcacactggccaagcattgttcctcctcagaatcgaa 12766140  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||| ||||| |||  || |||||| ||||||||||||||    
T  12766139 cccggtattccccgggtacgtccttggaaggagctccttg 12766100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 395 - 470
Target Start/End: Complemental strand, 20255477 - 20255402
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaa 470  Q
    |||||||||| ||||||||  |||||||| ||||||||||||| | |||  | |||||||||||||||||||||||    
T  20255477 ctttcgcaccagtttccgactcaccaaaggtggacgactaatccgactcatgcgtagaggcatgcgcactggtcaa 20255402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 395 - 534
Target Start/End: Original strand, 18136275 - 18136418
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaat----ctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaat 490  Q
    |||| |||||||||||||| ||||||| | ||||||||||||    | |||||  | |||||||||||| |||||  |||  ||| ||  ||| ||||||    
T  18136275 cttttgcaccggtttccgacccaccaatggtggacgactaattaatccggctcatgtgtagaggcatgcacactgaccaagtgttgttccccctgggaat 18136374  T
Q  491 cgaacccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||||||| ||||||||| ||| ||| || ||||||||||||||    
T  18136375 cgaacccggtattctccggatacgtctttggaaggagctccttg 18136418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 395 - 464
Target Start/End: Complemental strand, 20228825 - 20228756
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcact 464  Q
    ||||| || ||||||| |||||||||||||||| ||||||||||| |||| | |||||||||| ||||||    
T  20228825 ctttcacatcggtttctgatccaccaaagatgggcgactaatctgactcgtgtgtagaggcatacgcact 20228756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 413 - 534
Target Start/End: Complemental strand, 30995211 - 30995090
Alignment:
Q  413 atccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattctccgaata 512  Q
    ||||||||||||||  ||||||||| |||||| | |||||||||||||| |||| |||  ||| ||  ||| |||||||||||| | ||||| ||   ||    
T  30995211 atccaccaaagatgagcgactaatccggctcgtgcgtagaggcatgcgccctggccaagtgttgttccccctgggaatcgaacctggtattccccatgta 30995112  T
Q  513 agtccttcgaaggagctccttg 534  Q
     |||||| ||||||||||||||    
T  30995111 cgtccttggaaggagctccttg 30995090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 402 - 534
Target Start/End: Original strand, 7308370 - 7308502
Alignment:
Q  402 accggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgata 501  Q
    ||||||||  |||||| ||||| ||  ||||||||| |||||  | ||||||||||| ||||||  ||| |||| ||  ||| |||||||||||||||||    
T  7308370 accggtttttgatccatcaaaggtgagcgactaatccggctcatgcgtagaggcatgtgcactgcccaagcgttgttccccctgggaatcgaacccgata 7308469  T
Q  502 ttctccgaataagtccttcgaaggagctccttg 534  Q
    |||  | |||| |||||| ||| ||||||||||    
T  7308470 ttcctcaaatacgtccttggaatgagctccttg 7308502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 395 - 475
Target Start/End: Original strand, 18262617 - 18262697
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgtt 475  Q
    ||||||||||| ||| ||||||| || || ||| ||||||||| |||||| | ||||||| ||||||||||||||| ||||    
T  18262617 ctttcgcaccgattttcgatccatcagaggtgggcgactaatccggctcgtgtgtagaggtatgcgcactggtcaagcgtt 18262697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 395 - 534
Target Start/End: Complemental strand, 7866689 - 7866550
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||| ||||||  | ||||||||| ||| ||||||||| || ||| | |||||||||||| |||||| ||| |||| ||   ||  |||||||||    
T  7866689 ctttcgcactggtttctaacccaccaaaggtgggcgactaatccggttcgtgcgtagaggcatgcacactggccaagcgttgttcctcctcggaatcgaa 7866590  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||| |||||  ||  || |||||| ||||||||||||||    
T  7866589 cccggtattcctcgggtacgtccttggaaggagctccttg 7866550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 395 - 466
Target Start/End: Complemental strand, 13664368 - 13664297
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactgg 466  Q
    |||||||||||||||||||  |||||||| ||  ||| |||||||||||  | |||||||||||||||||||    
T  13664368 ctttcgcaccggtttccgacacaccaaaggtgatcgattaatctggctcatgcgtagaggcatgcgcactgg 13664297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 395 - 466
Target Start/End: Original strand, 39099778 - 39099849
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactgg 466  Q
    |||| |||||||||||||| ||||||||| ||| ||||||||| |||||  | ||||||||||| |||||||    
T  39099778 cttttgcaccggtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgtgcactgg 39099849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 395 - 470
Target Start/End: Complemental strand, 40773381 - 40773306
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaa 470  Q
    |||||||||||||||||||  ||||||||||| |||||||||| | ||||   ||||||||||||||  |||||||    
T  40773381 ctttcgcaccggtttccgacgcaccaaagatgaacgactaatccgactcgtatgtagaggcatgcgctttggtcaa 40773306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 395 - 460
Target Start/End: Original strand, 17693339 - 17693405
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaa-gatggacgactaatctggctcgcgagtagaggcatgcg 460  Q
    ||||||||||||||||| | |||||||| || ||||||||||||||||||  | |||||||||||||    
T  17693339 ctttcgcaccggtttccaacccaccaaaagacggacgactaatctggctcatgcgtagaggcatgcg 17693405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 395 - 504
Target Start/End: Complemental strand, 7336727 - 7336619
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||||||||||||||   ||||||||||| | ||||| ||||| |||||| | |||||||||||||||||| | || |||| || |||   | |||||||    
T  7336727 ctttcgcaccggttttt-atccaccaaaggtagacgattaatccggctcgtgcgtagaggcatgcgcactgataaagcgttgttctccttagaaatcgaa 7336629  T
Q  495 cccgatattc 504  Q
    ||||||||||    
T  7336628 cccgatattc 7336619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 395 - 496
Target Start/End: Original strand, 22655157 - 22655257
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||| ||||| ||| |||| |||| ||||||||||||||| ||   | |||||||||||| ||||| |||||| || ||| ||| ||||||||||    
T  22655157 ctttcgcactggttttcgacccac-aaaggtggacgactaatctgacttatgcgtagaggcatgcacactgatcaaacattgtttcccctgggaatcgaa 22655255  T
Q  495 cc 496  Q
    ||    
T  22655256 cc 22655257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 419 - 504
Target Start/End: Original strand, 35813021 - 35813106
Alignment:
Q  419 caaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattc 504  Q
    ||||| ||||||||||||| | |||  | |||||| |||||||||||||||| | |||||| |||  ||||||||||||| |||||    
T  35813021 caaaggtggacgactaatccgactcatgtgtagagacatgcgcactggtcaagcattatttcccctaggaatcgaacccggtattc 35813106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 503
Target Start/End: Original strand, 4016254 - 4016362
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||| ||||||||| ||||||| | ||  | ||||||| |||||| | ||||||||||||||||||| |||  ||| ||  ||| |  |||||||    
T  4016254 ctttcgcactggtttccgacccaccaatggtgagcaactaatccggctcgtgtgtagaggcatgcgcactggccaagtgttgttccccctgataatcgaa 4016353  T
Q  495 cccgatatt 503  Q
    |||||||||    
T  4016354 cccgatatt 4016362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 439
Target Start/End: Complemental strand, 20693041 - 20692997
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctg 439  Q
    ||||||||||||||||||| ||||||||| ||||| |||||||||    
T  20693041 ctttcgcaccggtttccgacccaccaaaggtggacaactaatctg 20692997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 475
Target Start/End: Complemental strand, 21149842 - 21149762
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgtt 475  Q
    |||||||| |||||| | ||||||||| | ||| |||||||||   |||| | |||||| |||||||||||||||||||||    
T  21149842 ctttcgcatcggttttctatccaccaatggtgggcgactaatccaactcgtgcgtagagtcatgcgcactggtcaaacgtt 21149762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 464
Target Start/End: Original strand, 6764462 - 6764525
Alignment:
Q  401 caccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcact 464  Q
    |||| |||||||| ||| ||||||| | ||||||||| |||||| | |||||||||||||||||    
T  6764462 caccagtttccgacccaacaaagataggcgactaatccggctcgtgcgtagaggcatgcgcact 6764525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 534
Target Start/End: Original strand, 11845800 - 11845939
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||| ||||||||||| | ||| ||||| ||| ||| ||||  |||||    ||||||||||||||||||| |||||||| ||  |||  | |||||||    
T  11845800 ctttcacaccggtttccaacccatcaaaggtgggcgattaattcggctcatacgtagaggcatgcgcactggccaaacgttgttccccctcgaaatcgaa 11845899  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||||||||   ||  || |||||| ||||||||||||||    
T  11845900 cccgatatttctcgggtacgtccttggaaggagctccttg 11845939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 395 - 465
Target Start/End: Complemental strand, 14728191 - 14728121
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactg 465  Q
    ||||||||||||||||||| ||| ||||| ||  | ||||||| |||||  | ||||||||||||||||||    
T  14728191 ctttcgcaccggtttccgacccatcaaaggtgagcaactaatccggctcatgcgtagaggcatgcgcactg 14728121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 419 - 533
Target Start/End: Complemental strand, 26077225 - 26077111
Alignment:
Q  419 caaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattctccgaataagtcct 518  Q
    ||||||||  ||| |||||||||||| | ||||||||||| ||||||| ||| |||| ||  | | ||||||||||||   ||||| || |||| |||||    
T  26077225 caaagatgagcgattaatctggctcgtgcgtagaggcatgtgcactggccaagcgttgttccctctgggaatcgaacctagtattccccaaatacgtcct 26077126  T
Q  519 tcgaaggagctcctt 533  Q
    | ||| |||||||||    
T  26077125 tggaatgagctcctt 26077111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 448 - 534
Target Start/End: Complemental strand, 28857183 - 28857097
Alignment:
Q  448 gtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    ||||||||||||||||||| |||  ||| ||  ||| |||||||||||||| ||||| |||  |  |||||| ||||||||||||||    
T  28857183 gtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccgggtgcgtccttggaaggagctccttg 28857097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 465
Target Start/End: Complemental strand, 15034174 - 15034113
Alignment:
Q  404 cggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactg 465  Q
    |||||||||||||| ||||| ||||| ||||||| |||||  | |||||||||||| |||||    
T  15034174 cggtttccgatccatcaaaggtggacaactaatcaggctcatgcgtagaggcatgcacactg 15034113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 460
Target Start/End: Complemental strand, 18045746 - 18045682
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcg 460  Q
    |||||||| ||||||||||||||| |||| ||||||| ||||| |||||  | |||||||||||||    
T  18045746 ctttcgcatcggtttccgatccactaaaggtggacgattaatc-ggctcatgtgtagaggcatgcg 18045682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 472
Target Start/End: Complemental strand, 25453032 - 25452956
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaac 472  Q
    |||| |||||||||| ||| | || |||| ||| ||||||||| |||||| | |||||||||||| ||||||||||||    
T  25453032 cttttgcaccggttttcgaccgactaaagttgg-cgactaatccggctcgtgcgtagaggcatgcacactggtcaaac 25452956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 454 - 534
Target Start/End: Complemental strand, 1899050 - 1898970
Alignment:
Q  454 gcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    ||||||||||||| ||| |||| ||  ||| |||||||||||||| ||||| |||  ||  ||||| ||||||||||||||    
T  1899050 gcatgcgcactggccaagcgttgttccccctgggaatcgaacccggtattccccgggtacatccttggaaggagctccttg 1898970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 395 - 475
Target Start/End: Original strand, 9168252 - 9168332
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgtt 475  Q
    |||| |||||| ||| ||| |||| |||| ||||||||||||| |||||  | ||||||| ||||||||||| ||| ||||    
T  9168252 cttttgcaccgattttcgacccactaaaggtggacgactaatccggctcatgcgtagaggtatgcgcactggccaagcgtt 9168332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 395 - 475
Target Start/End: Original strand, 24463885 - 24463965
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgtt 475  Q
    |||| |||||||||| ||| |||  |||| ||| ||||||||| |||||| |  |||||||||||||||||| ||| ||||    
T  24463885 cttttgcaccggttttcgacccagtaaaggtgggcgactaatccggctcgtgcatagaggcatgcgcactggccaatcgtt 24463965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 395 - 443
Target Start/End: Complemental strand, 28857057 - 28857009
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctc 443  Q
    ||||||||||||||||||| ||||||||| ||  ||||||||| |||||    
T  28857057 ctttcgcaccggtttccgacccaccaaaggtgagcgactaatccggctc 28857009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 395 - 443
Target Start/End: Complemental strand, 28857254 - 28857206
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctc 443  Q
    ||||||||||||||||||| ||||||||| ||  ||||||||| |||||    
T  28857254 ctttcgcaccggtttccgacccaccaaaggtgagcgactaatccggctc 28857206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 429 - 469
Target Start/End: Original strand, 35561851 - 35561891
Alignment:
Q  429 cgactaatctggctcgcgagtagaggcatgcgcactggtca 469  Q
    |||||||||||||||  | ||||||||||||||||||||||    
T  35561851 cgactaatctggctcatgtgtagaggcatgcgcactggtca 35561891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 68; Significance: 4e-30; HSPs: 61)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 395 - 534
Target Start/End: Original strand, 18902529 - 18902668
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||||||| ||||||||| ||| |||||||||||||||| | |||||| || ||||||||||||| |||| ||  ||  ||||||||||    
T  18902529 ctttcgcaccggtttccgacccaccaaaggtgggcgactaatctggctcgtgcgtagagacacgcgcactggtcaagcgttgttccccgtgggaatcgaa 18902628  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||| ||||| |||| || |||||| ||||||||||||||    
T  18902629 cccggtattccccgagtacgtccttggaaggagctccttg 18902668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 395 - 534
Target Start/End: Complemental strand, 8410238 - 8410099
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||||||| || |||||  ||| ||||||||| |||||| | ||||||||||||||||||| |||  ||| ||  ||| ||||||||||    
T  8410238 ctttcgcaccggtttccgaccccccaaaagtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaa 8410139  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    ||||||||||||||  || |||||| ||||||||||||||    
T  8410138 cccgatattctccgggtacgtccttggaaggagctccttg 8410099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 395 - 534
Target Start/End: Original strand, 25540403 - 25540542
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||||||| ||||||||| ||||||||||||| |||||| | ||||||||||||||||||| ||| |||| ||  |||  |||||||||    
T  25540403 ctttcgcaccggtttccgacccaccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccctaggaatcgaa 25540502  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||  ||||| ||  ||| |||||| ||| ||||||||||    
T  25540503 cccagtattccccagatacgtccttggaatgagctccttg 25540542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 395 - 536
Target Start/End: Original strand, 14169608 - 14169749
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||||||| ||||||| | | ||||||||||| |||||  | |||||| ||||||||||||||||  ||| ||  ||| | ||||||||    
T  14169608 ctttcgcaccggtttccgacccaccaatggtagacgactaatccggctcatgcgtagagacatgcgcactggtcaagtgttgttcccccggagaatcgaa 14169707  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttgtc 536  Q
    |||||||||| ||||||| |||||| ||| || |||||||||    
T  14169708 cccgatattccccgaatacgtccttggaaagatctccttgtc 14169749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 406 - 534
Target Start/End: Original strand, 10026626 - 10026754
Alignment:
Q  406 gtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattct 505  Q
    |||||||| ||||||||| ||| ||||||||| |||||  | ||||||||||||||||||| |||||||| ||  ||| | |||||||||||| |||| |    
T  10026626 gtttccgacccaccaaaggtggtcgactaatccggctcatgcgtagaggcatgcgcactggccaaacgttgttccccctgagaatcgaacccggtatttt 10026725  T
Q  506 ccgaataagtccttcgaaggagctccttg 534  Q
    |||| || |||||| ||||||||||||||    
T  10026726 ccgagtacgtccttggaaggagctccttg 10026754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 395 - 534
Target Start/End: Complemental strand, 7747381 - 7747242
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||||||| |||| |||| || |||||||||| |||||  | |||||||||||| |||||| |||||||| ||   ||  |||||||||    
T  7747381 ctttcgcaccggtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcacactggccaaacgttgttcctcctaggaatcgaa 7747282  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||| ||||| ||| ||| |||||| ||||||||||||||    
T  7747281 cccggtattccccggatacgtccttggaaggagctccttg 7747242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 395 - 534
Target Start/End: Complemental strand, 21286551 - 21286412
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||| |||||||||||| | ||||||| ||||   ||||||||  ||||| | ||||||||||||||||||||||| |||| |||  || ||||||||||    
T  21286551 cttttgcaccggtttccaacccaccaatgatgagtgactaatccagctcgtgcgtagaggcatgcgcactggtcaagcgttgtttcgcctgggaatcgaa 21286452  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||| ||||| ||| ||| |||||| ||||||||||||||    
T  21286451 cccggtattccccggatacgtccttggaaggagctccttg 21286412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 395 - 534
Target Start/End: Complemental strand, 38005509 - 38005370
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||||||||| |||||||||||||||||| ||| ||||||||| |||||  | ||||||||||||||||||| ||| |||| ||  ||  ||||||||||    
T  38005509 ctttcgcaccagtttccgatccaccaaaggtgggcgactaatccggctcatgtgtagaggcatgcgcactggccaagcgttgttccccttgggaatcgaa 38005410  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||  ||||| |||  || |||||| ||||||||||||||    
T  38005409 cccagtattccccgggtacgtccttggaaggagctccttg 38005370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 395 - 533
Target Start/End: Complemental strand, 10823167 - 10823029
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||||||| |||| |||| ||| ||||||||| |||||| | ||||||||||||||||||| ||| |||| ||   || ||||||| ||    
T  10823167 ctttcgcaccggtttccgacccacaaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttcctcctgggaatcaaa 10823068  T
Q  495 cccgatattctccgaataagtccttcgaaggagctcctt 533  Q
    |||| ||||| |||  || |||||| |||||||||||||    
T  10823067 cccggtattccccgggtacgtccttggaaggagctcctt 10823029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 395 - 533
Target Start/End: Original strand, 28616378 - 28616516
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||||||||||||||| || |||| |||||||| |||||||||||||||| | ||||||||||||||||||  |||  ||||||  ||| |  |||||||    
T  28616378 ctttcgcaccggtttctgacccactaaagatgggcgactaatctggctcgtgcgtagaggcatgcgcactgcccaagtgttattccccctgaaaatcgaa 28616477  T
Q  495 cccgatattctccgaataagtccttcgaaggagctcctt 533  Q
    ||||||||||  || ||| |||||| ||||||| |||||    
T  28616478 cccgatattccgcggatatgtccttggaaggagttcctt 28616516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 395 - 536
Target Start/End: Complemental strand, 12864331 - 12864190
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||||||| ||||||| | |||||||||||||||||||  | | ||||||||||||||||  |||  ||| ||  ||| || |||||||    
T  12864331 ctttcgcaccggtttccgacccaccaatggtggacgactaatctggctcatgcgcagaggcatgcgcactgaccaagtgttgttccccctggaaatcgaa 12864232  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttgtc 536  Q
     ||| ||||| ||||||| ||| || ||||||||||||||||    
T  12864231 tccggtattccccgaatacgtcattggaaggagctccttgtc 12864190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 406 - 534
Target Start/End: Original strand, 10046487 - 10046614
Alignment:
Q  406 gtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattct 505  Q
    |||||||| ||||||||| ||| ||||||||| |||||  | ||||||||||||||||| |||||||||| ||| ||  | |||||||||||| ||||||    
T  10046487 gtttccgacccaccaaaggtggtcgactaatccggctcatgcgtagaggcatgcgcact-gtcaaacgttgtttcccttgagaatcgaacccggtattct 10046585  T
Q  506 ccgaataagtccttcgaaggagctccttg 534  Q
    ||| ||| || ||| ||||||||||||||    
T  10046586 ccggatacgttcttggaaggagctccttg 10046614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 395 - 534
Target Start/End: Complemental strand, 25549835 - 25549696
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||| |||||| ||| ||||||| ||||||||||||||||||| |||||| | ||||||||||| ||||| | |||| ||| |||||||   ||||||||    
T  25549835 cttttgcaccgatttacgatccatcaaagatggacgactaatccggctcgtgcgtagaggcatgtgcactagccaaatgttgttttccctaagaatcgaa 25549736  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||  ||||| || |||| || ||| ||||||||||||||    
T  25549735 cccagtattccccaaatacgtacttggaaggagctccttg 25549696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 395 - 534
Target Start/End: Complemental strand, 41220742 - 41220603
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||||||| |||| |||| || |||||||||  |||||  | ||||||||||||||||||| ||| |||| ||   || ||||||||||    
T  41220742 ctttcgcaccggtttccgacccactaaaggtgaacgactaattcggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctgggaatcgaa 41220643  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||| ||||| |||  || |||||| ||||||||||||||    
T  41220642 cccggtattccccgggtacgtccttggaaggagctccttg 41220603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 395 - 534
Target Start/End: Complemental strand, 44945700 - 44945562
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||||||||||||||||||||||| |||| ||| ||||||||| |||||| | |||||||||||||||||   ||| ||||  || | | ||||||| ||    
T  44945700 ctttcgcaccggtttccgatccactaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactatccaagcgtt-gttcctctgggaatcaaa 44945602  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||  |||||||||| || |||||| ||||||||||||||    
T  44945601 cccagtattctccgagtacgtccttggaaggagctccttg 44945562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 395 - 534
Target Start/End: Complemental strand, 22593240 - 22593103
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||||||||||||| |||| ||||||||| ||||||||||||| |||||  | ||||||||||||||||||| | |||||| ||  ||| ||||||||||    
T  22593240 ctttcgcaccggtt-ccgacccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactgg-ccaacgttgttccccctgggaatcgaa 22593143  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    | |  ||||| |||  || |||||| ||||||||||||||    
T  22593142 ctcagtattccccgggtacgtccttggaaggagctccttg 22593103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 395 - 504
Target Start/End: Complemental strand, 12455417 - 12455308
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||||||| ||||||| | ||  ||||||||| |||||| | |||||||||||||||||||  || |||| ||| ||| || |||||||    
T  12455417 ctttcgcaccggtttccgacccaccaatggtgagcgactaatccggctcgtgcgtagaggcatgcgcactggctaagcgttgtttcccctggaaatcgaa 12455318  T
Q  495 cccgatattc 504  Q
    |||| |||||    
T  12455317 cccggtattc 12455308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 395 - 504
Target Start/End: Original strand, 39806884 - 39806993
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||||||||||||||  || ||||||||| |||| |||||||| | |||| | ||||||||||||||||||| |||||||| |||  |  ||||||||||    
T  39806884 ctttcgcaccggtttatgaaccaccaaaggtggatgactaatccgactcgtgtgtagaggcatgcgcactggccaaacgttgtttctcttgggaatcgaa 39806983  T
Q  495 cccgatattc 504  Q
    |||| |||||    
T  39806984 cccggtattc 39806993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 395 - 504
Target Start/End: Complemental strand, 44139591 - 44139482
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||||||| ||||||  | ||| ||||||||| |||||| | ||||||||| ||||||||| ||| |||| ||  ||| ||||||||||    
T  44139591 ctttcgcaccggtttccgacccaccattggtgggcgactaatccggctcgtgcgtagaggcacgcgcactggccaagcgttgttccccctgggaatcgaa 44139492  T
Q  495 cccgatattc 504  Q
    |||| |||||    
T  44139491 cccggtattc 44139482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 395 - 495
Target Start/End: Complemental strand, 16325702 - 16325602
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||||||| ||||||| | |||||||||||||||||||  | |||||||||||| |||||| |||  ||| ||  ||| ||||||||||    
T  16325702 ctttcgcaccggtttccgacccaccaatggtggacgactaatctggctcatgcgtagaggcatgcacactggccaagtgttgttccccctgggaatcgaa 16325603  T
Q  495 c 495  Q
    |    
T  16325602 c 16325602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 395 - 536
Target Start/End: Original strand, 16813164 - 16813304
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaa-tcga 493  Q
    ||||||||| | ||||| | | ||||||||||||||||||||| |||||| |  |||||||||||| |||||||||||||  | |||||| | || | ||    
T  16813164 ctttcgcactgatttccaacctaccaaagatggacgactaatccggctcgtgcatagaggcatgcgtactggtcaaacgt--tgttcccctgaaagttga 16813261  T
Q  494 acccgatattctccgaataagtccttcgaaggagctccttgtc 536  Q
    ||  | |||||||||| || |||||| ||||||||||||||||    
T  16813262 acttggtattctccgagtacgtccttggaaggagctccttgtc 16813304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 395 - 536
Target Start/End: Original strand, 16852443 - 16852583
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaa-tcga 493  Q
    ||||||||| | ||||| | | ||||||||||||||||||||| |||||| |  |||||||||||| |||||||||||||  | |||||| | || | ||    
T  16852443 ctttcgcactgatttccaacctaccaaagatggacgactaatccggctcgtgcatagaggcatgcgtactggtcaaacgt--tgttcccctgaaagttga 16852540  T
Q  494 acccgatattctccgaataagtccttcgaaggagctccttgtc 536  Q
    ||  | |||||||||| || |||||| ||||||||||||||||    
T  16852541 acttggtattctccgagtacgtccttggaaggagctccttgtc 16852583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 400 - 466
Target Start/End: Complemental strand, 7787158 - 7787092
Alignment:
Q  400 gcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactgg 466  Q
    |||||||||| ||||||||||||||||| ||||||||| |||||| | ||||||||||||| |||||    
T  7787158 gcaccggttttcgatccaccaaagatgggcgactaatccggctcgtgcgtagaggcatgcgtactgg 7787092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 395 - 533
Target Start/End: Complemental strand, 35946845 - 35946708
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||||||||| |||||||| ||||||| | ||||||||||||| |||||| | |||||||||||| || ||| ||| ||||  || |||  |||||||||    
T  35946845 ctttcgcaccagtttccgacccaccaatggtggacgactaatccggctcgtgcgtagaggcatgcacaatggccaagcgtt-gttcccctaggaatcgaa 35946747  T
Q  495 cccgatattctccgaataagtccttcgaaggagctcctt 533  Q
    | || ||||| ||| ||| |||||| ||| |||||||||    
T  35946746 ctcggtattccccggatacgtccttagaatgagctcctt 35946708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 395 - 532
Target Start/End: Complemental strand, 11069985 - 11069848
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||||||| |||||||||| ||||||| | ||||||||||||   ||||| | ||||||| ||||||||||| |||||||| ||  |||  |||||||||    
T  11069985 ctttcgcatcggtttccgacccaccaacggtggacgactaattcagctcgtgcgtagaggtatgcgcactggccaaacgttgttccccctcggaatcgaa 11069886  T
Q  495 cccgatattctccgaataagtccttcgaaggagctcct 532  Q
    || | ||||| |||  || |||||| ||| ||||||||    
T  11069885 cctggtattccccgggtacgtccttggaatgagctcct 11069848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 401 - 534
Target Start/End: Original strand, 39201513 - 39201646
Alignment:
Q  401 caccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgat 500  Q
    ||||||||||||| ||||||||| || |||||||||| |||||  | |||||||||||| |||||| ||||| || ||  ||| | ||||||||  || |    
T  39201513 caccggtttccgacccaccaaaggtgaacgactaatccggctcatgcgtagaggcatgcacactggccaaacattgttccccctgagaatcgaattcggt 39201612  T
Q  501 attctccgaataagtccttcgaaggagctccttg 534  Q
    ||||  ||| || |||||| ||||||||||||||    
T  39201613 attcctcgagtacgtccttggaaggagctccttg 39201646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 395 - 475
Target Start/End: Original strand, 9360747 - 9360827
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgtt 475  Q
    ||||||||||||||||||  |||| |||| ||| ||||||||  |||||| | ||||||||||||||||||| ||||||||    
T  9360747 ctttcgcaccggtttccggcccactaaaggtgggcgactaattcggctcgtgcgtagaggcatgcgcactggccaaacgtt 9360827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 395 - 534
Target Start/End: Complemental strand, 2550975 - 2550836
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||| | | ||||||||  ||| ||||||||| |||||  | |||||| ||||||||||||  ||  ||| ||   || ||||||||||    
T  2550975 ctttcgcaccggttttcaacccaccaaaagtgggcgactaatccggctcatgcgtagagacatgcgcactggctaagtgttgttcctcctgggaatcgaa 2550876  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||||||||| ||| ||| ||||||  |||||||||||||    
T  2550875 cccgatattccccggatacgtccttgtaaggagctccttg 2550836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 395 - 498
Target Start/End: Original strand, 41031905 - 41032008
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||| ||||||||| ||||||||| |||  |||||||| |||||| | |||||||||||| |||||| |||  ||| ||  ||| ||||||||||    
T  41031905 ctttcgcactggtttccgacccaccaaaggtgggtgactaatccggctcgtgcgtagaggcatgcacactggccaagtgttgttccccctgggaatcgaa 41032004  T
Q  495 cccg 498  Q
    ||||    
T  41032005 cccg 41032008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 400 - 498
Target Start/End: Complemental strand, 10669694 - 10669596
Alignment:
Q  400 gcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccg 498  Q
    |||||||||||||| ||||||||| || |||| ||||| | |||| | |||||| |||||||||||| ||| |||| || |||| ||||||| ||||||    
T  10669694 gcaccggtttccgacccaccaaaggtgaacgattaatccgactcgtgcgtagagacatgcgcactggccaagcgttgttctccctgggaatcaaacccg 10669596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 395 - 533
Target Start/End: Original strand, 15234060 - 15234198
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||||||| |||||||||| | | |||||||| |||||||||||  || | | |||||||||||||||||||||||  ||| ||  ||| | ||||||||    
T  15234060 ctttcgcatcggtttccgacctatcaaagatgaacgactaatctaacttgtgcgtagaggcatgcgcactggtcaagtgttgttccccctgagaatcgaa 15234159  T
Q  495 cccgatattctccgaataagtccttcgaaggagctcctt 533  Q
    ||   ||||| |||  || |||||| |||||||||||||    
T  15234160 cctagtattccccgggtacgtccttggaaggagctcctt 15234198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 395 - 497
Target Start/End: Complemental strand, 34722787 - 34722685
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||||||||||||||| |||||| ||||| ||| ||||||||| |||||| | |||||| |||| ||||||  ||| |||| || |||| | ||||||||    
T  34722787 ctttcgcaccggtttctgatccatcaaaggtgggcgactaatccggctcgtgcgtagagacatgtgcactgaccaagcgttgttctccctgagaatcgaa 34722688  T
Q  495 ccc 497  Q
    |||    
T  34722687 ccc 34722685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 395 - 533
Target Start/End: Complemental strand, 38962870 - 38962732
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||||||||| ||||| || ||||||||| ||||||||||||| || ||  | ||||||||||||||||||| ||| |||| ||   || |  |||||||    
T  38962870 ctttcgcaccagtttctgacccaccaaaggtggacgactaatccggttcatgcgtagaggcatgcgcactggccaagcgttgttcctcctgaaaatcgaa 38962771  T
Q  495 cccgatattctccgaataagtccttcgaaggagctcctt 533  Q
    |||| ||||| ||| ||| ||||||  || |||||||||    
T  38962770 cccggtattccccggatacgtccttgaaatgagctcctt 38962732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 396 - 465
Target Start/End: Complemental strand, 2785038 - 2784969
Alignment:
Q  396 tttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactg 465  Q
    ||||||||||||||||||  || ||| ||||||||||||||||| |||  | ||||||||||||||||||    
T  2785038 tttcgcaccggtttccgactcatcaatgatggacgactaatctgactcatgcgtagaggcatgcgcactg 2784969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 396 - 464
Target Start/End: Original strand, 3042503 - 3042571
Alignment:
Q  396 tttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcact 464  Q
    ||||||| || ||| ||||| || |||||||||||||||||||| |||||  |||||||||||||||||    
T  3042503 tttcgcatcgattttcgatcaactaaagatggacgactaatctgcctcgcacgtagaggcatgcgcact 3042571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 395 - 475
Target Start/End: Original strand, 3643886 - 3643966
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgtt 475  Q
    |||||||| |||||||||  ||||||||| |||||||||||||  ||||  | ||||||||||||||||||| ||| ||||    
T  3643886 ctttcgcaacggtttccggcccaccaaaggtggacgactaatccagctcatgcgtagaggcatgcgcactggccaagcgtt 3643966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 396 - 534
Target Start/End: Original strand, 20612534 - 20612674
Alignment:
Q  396 tttcgcaccggtttccgatccaccaaagatggacgactaatct-ggctcgcgagtagaggcatgcgcactggtcaaacgttattttc-cccgggaatcga 493  Q
    |||||||||||||||||| ||||||| | |||||||||||||  |||||  |  |||||||||||||||||| |||  ||| ||  | || | |||||||    
T  20612534 tttcgcaccggtttccgacccaccaatggtggacgactaatcccggctcatgcatagaggcatgcgcactggccaagtgttgttccctcctgagaatcga 20612633  T
Q  494 acccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    ||||| ||||| |||||||   |||| ||||||||||||||    
T  20612634 acccggtattccccgaatacaaccttggaaggagctccttg 20612674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 415 - 475
Target Start/End: Complemental strand, 24179655 - 24179595
Alignment:
Q  415 ccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgtt 475  Q
    ||||||||||||||||||||||| |||||  | ||||||||||| ||||||| ||||||||    
T  24179655 ccaccaaagatggacgactaatccggctcatgcgtagaggcatgtgcactggccaaacgtt 24179595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 395 - 475
Target Start/End: Original strand, 34130301 - 34130381
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgtt 475  Q
    ||||||||||| ||||||||| ||||| | | |||||||||||||||||  | |||||| |||| ||| ||||||||||||    
T  34130301 ctttcgcaccgatttccgatctaccaatggtagacgactaatctggctcatgcgtagagacatgtgcaatggtcaaacgtt 34130381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 395 - 475
Target Start/End: Complemental strand, 37560280 - 37560200
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgtt 475  Q
    ||||| ||||||||| ||| ||| ||||| ||||||| ||||| |||||| | ||||||||||||||||||  ||||||||    
T  37560280 ctttcacaccggttttcgacccatcaaaggtggacgattaatccggctcgtgcgtagaggcatgcgcactgaccaaacgtt 37560200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 395 - 443
Target Start/End: Original strand, 44548723 - 44548771
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctc 443  Q
    |||||||||| |||||||||||| ||||| |||||||||||||||||||    
T  44548723 ctttcgcaccagtttccgatccatcaaaggtggacgactaatctggctc 44548771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 395 - 483
Target Start/End: Complemental strand, 44773370 - 44773282
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccc 483  Q
    ||||||||||||||||||| ||| ||||| ||  ||||||||| ||||| ||   |||||||||| |||||| |||||||| |||||||    
T  44773370 ctttcgcaccggtttccgacccatcaaaggtgagcgactaatccggctcacgcacagaggcatgcacactggccaaacgttgttttccc 44773282  T

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Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 395 - 466
Target Start/End: Original strand, 6358150 - 6358221
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactgg 466  Q
    ||||| ||||||||| ||| ||||||| | ||||||||||||| |||||  | |||||||||||||||||||    
T  6358150 ctttcacaccggttttcgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactgg 6358221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 395 - 462
Target Start/End: Original strand, 20116611 - 20116678
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgca 462  Q
    ||||||||||||||||||| ||| ||||| |||||| |||||| |||||  | |||||||||||||||    
T  20116611 ctttcgcaccggtttccgacccatcaaaggtggacggctaatccggctcatgcgtagaggcatgcgca 20116678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 405 - 504
Target Start/End: Original strand, 33634448 - 33634547
Alignment:
Q  405 ggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattc 504  Q
    ||||| ||||||||||||| | || |||||||  |||||| | | || ||||||||||||||  ||||||||||| | | |||||||||||||| |||||    
T  33634448 ggttttcgatccaccaaaggtagatgactaattcggctcgtgcgcagcggcatgcgcactggctaaacgttatttcctctgggaatcgaacccggtattc 33634547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 395 - 530
Target Start/End: Original strand, 42770650 - 42770785
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||| ||| |||||| ||| ||||||||| ||||||| ||||| |||||| | | ||||||||||||||||| ||| |||| ||  ||| | |||| |||    
T  42770650 cttttgcatcggttttcgacccaccaaaggtggacgattaatccggctcgtgcgaagaggcatgcgcactggccaagcgttgttccccctgagaattgaa 42770749  T
Q  495 cccgatattctccgaataagtccttcgaaggagctc 530  Q
    |||| ||||   || ||| |||||| ||||||||||    
T  42770750 cccggtatttctcggatacgtccttggaaggagctc 42770785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 415 - 534
Target Start/End: Original strand, 45263686 - 45263805
Alignment:
Q  415 ccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattctccgaataag 514  Q
    ||||||||||||  ||| ||||| |||||| | ||||||||||||||||||| ||| |||| ||  | | |||||||||||||| ||||| ||| ||||     
T  45263686 ccaccaaagatgagcgattaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccctctgggaatcgaacccggtattccccggataaa 45263785  T
Q  515 tccttcgaaggagctccttg 534  Q
    |  ||  |||||||||||||    
T  45263786 tttttgaaaggagctccttg 45263805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 405 - 530
Target Start/End: Complemental strand, 331598 - 331473
Alignment:
Q  405 ggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattc 504  Q
    ||||||| | ||||||||| ||| ||||||||| |||||  | ||||| ||||||||||||| |||  ||| ||  ||| |||||||||||||| |||||    
T  331598 ggtttccaacccaccaaaggtgggcgactaatccggctcatgcgtagaagcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattc 331499  T
Q  505 tccgaataagtccttcgaaggagctc 530  Q
     |||  || |||||| ||| ||||||    
T  331498 cccgggtacgtccttggaaagagctc 331473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 429 - 534
Target Start/End: Original strand, 21180347 - 21180452
Alignment:
Q  429 cgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattctccgaataagtccttcgaaggagc 528  Q
    ||||||||| |||||| | ||||||||||| ||||||| |||  ||| || |||  |||||||||| ||| |||||| ||  || |||||| ||||||||    
T  21180347 cgactaatccggctcgtgcgtagaggcatgtgcactggccaagtgttgttctccatgggaatcgaatccggtattcttcgggtacgtccttggaaggagc 21180446  T
Q  529 tccttg 534  Q
    ||||||    
T  21180447 tccttg 21180452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 395 - 444
Target Start/End: Complemental strand, 29422322 - 29422273
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcg 444  Q
    ||||||||||| ||||||||||| ||||| ||||||||||||| ||||||    
T  29422322 ctttcgcaccgatttccgatccatcaaaggtggacgactaatccggctcg 29422273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 395 - 436
Target Start/End: Complemental strand, 44023402 - 44023361
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaat 436  Q
    ||||||||||||||||| | ||||||||||||||||||||||    
T  44023402 ctttcgcaccggtttccaacccaccaaagatggacgactaat 44023361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 443
Target Start/End: Complemental strand, 792261 - 792213
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctc 443  Q
    |||| |||||||||||||| ||||||||||||| ||||||||| |||||    
T  792261 cttttgcaccggtttccgacccaccaaagatgggcgactaatccggctc 792213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 507
Target Start/End: Original strand, 3848913 - 3849025
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||  ||| ||| ||| ||||| || |||||||||| | |||| | |||||| ||||||| |||| |||||||| ||| ||| |  |||||||    
T  3848913 ctttcgcaccaattttcgacccatcaaaggtgaacgactaatccgactcgtgcgtagagacatgcgccctggccaaacgttgtttcccctgataatcgaa 3849012  T
Q  495 cccgatattctcc 507  Q
    |||| ||||||||    
T  3849013 cccggtattctcc 3849025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 531
Target Start/End: Complemental strand, 5035395 - 5035259
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||  ||||||||| |||  |||| |||| || ||||| || ||| | |||||| |||||||||||||||| | || ||||  | ||||||||||    
T  5035395 ctttcgcatgggtttccgacccattaaaggtggatgattaatccggttcgtgcgtagagacatgcgcactggtcaagcattgttttttctgggaatcgaa 5035296  T
Q  495 cccgatattctccgaataagtccttcgaaggagctcc 531  Q
    ||| ||||| |||| ||| || ||| |||| ||||||    
T  5035295 cccaatattttccggatacgttcttagaagcagctcc 5035259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 530
Target Start/End: Original strand, 2528340 - 2528475
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||||||||| ||||||||  ||| |||||||  ||||||||| ||||   | |||||||||||| |||||  ||| |||| ||  ||| ||||||||||    
T  2528340 ctttcgcaccagtttccgactcactaaagatgagcgactaatccggcttatgtgtagaggcatgcacactgaccaagcgttgttccccctgggaatcgaa 2528439  T
Q  495 cccgatattctccgaataagtccttcgaaggagctc 530  Q
    |||| | |||  ||| || |||||| ||||||||||    
T  2528440 cccggtgttcctcgagtacgtccttggaaggagctc 2528475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 466
Target Start/End: Complemental strand, 27726047 - 27725976
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactgg 466  Q
    ||||| ||||||||||||| ||||||  | ||| ||||||||| |||| | | |||||||||||||||||||    
T  27726047 ctttcacaccggtttccgacccaccattggtgggcgactaatccggctagtgcgtagaggcatgcgcactgg 27725976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 466
Target Start/End: Original strand, 28525454 - 28525525
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactgg 466  Q
    ||||| |||| |||||||| |||  |||| |||| |||||||| |||||| | |||||||||||||||||||    
T  28525454 ctttcacaccagtttccgacccattaaaggtggatgactaatccggctcgtgcgtagaggcatgcgcactgg 28525525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 503
Target Start/End: Complemental strand, 29653729 - 29653626
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||||||||||||||||    |||||||| ||| ||||||||  |||||| | ||||||||||||||||||  ||| |||| ||||||| || |||||||    
T  29653729 ctttcgcaccggtttcc----caccaaaggtgg-cgactaattcggctcgtgcgtagaggcatgcgcactgcccaagcgttgttttccctggaaatcgaa 29653635  T
Q  495 cccgatatt 503  Q
     ||| ||||    
T  29653634 tccggtatt 29653626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 466
Target Start/End: Original strand, 34346286 - 34346357
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactgg 466  Q
    ||||||||||||||||||| ||||||||| ||  ||| ||||||| |||  | |||||||||||| ||||||    
T  34346286 ctttcgcaccggtttccgacccaccaaaggtgagcgattaatctgactcatgcgtagaggcatgcacactgg 34346357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 395 - 465
Target Start/End: Original strand, 18846220 - 18846290
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactg 465  Q
    ||||||||||||||| ||||||| ||| ||||  ||| ||||||||||||   ||| ||||||||||||||    
T  18846220 ctttcgcaccggttttcgatccatcaatgatgagcgattaatctggctcgtacgtaaaggcatgcgcactg 18846290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 448 - 504
Target Start/End: Original strand, 40968967 - 40969023
Alignment:
Q  448 gtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattc 504  Q
    |||||||||| |||||||  |||||||| ||||||| || ||||||||||| |||||    
T  40968967 gtagaggcattcgcactgaccaaacgttgttttccctggaaatcgaacccggtattc 40969023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 64; Significance: 1e-27; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 395 - 534
Target Start/End: Complemental strand, 1797570 - 1797431
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||| |||||||||| ||||||| |||||||||||||||| || |||||| | |||||| |||||||||||| ||| |||| ||| ||| ||||||||||    
T  1797570 cttttgcaccggttttcgatccatcaaagatggacgactagtccggctcgtgcgtagagacatgcgcactggccaagcgttgtttcccctgggaatcgaa 1797471  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||| |||||  || ||| |||||| ||||||||||||||    
T  1797470 cccggtattcctcggatacgtccttggaaggagctccttg 1797431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 395 - 534
Target Start/End: Original strand, 17748381 - 17748520
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||||||| |||||||||| ||| ||||| ||||||||||||| ||||||   ||||||||||||||||||| ||| |||| ||  ||| ||||||||||    
T  17748381 ctttcgcatcggtttccgacccaacaaaggtggacgactaatccggctcgtacgtagaggcatgcgcactggccaagcgttgttccccctgggaatcgaa 17748480  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||| ||||| ||||||| |||||| |||| |||| ||||    
T  17748481 cccggtattccccgaatacgtccttggaagaagctgcttg 17748520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 395 - 534
Target Start/End: Complemental strand, 48804793 - 48804654
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||||||| ||||||| | ||||||||||||| |||||  | ||||||||||||||||||| |||  ||| ||  ||  ||||||||||    
T  48804793 ctttcgcaccggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccttgggaatcgaa 48804694  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||| ||||| ||| ||| |||||| ||||||||||||||    
T  48804693 cccggtattccccggatacgtccttggaaggagctccttg 48804654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 395 - 536
Target Start/End: Complemental strand, 1606051 - 1605910
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||||||||||||||||| ||| ||||||||| |||||  |  |||||||||| ||||||| ||| |||| ||  ||| || |||||||    
T  1606051 ctttcgcaccggtttccgatccaccaaaggtgggcgactaatccggctcaagcctagaggcatgtgcactggccaagcgttgttccccctggaaatcgaa 1605952  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttgtc 536  Q
    || | |||||||||  || |||||| ||||||||||||||||    
T  1605951 ccaggtattctccgggtacgtccttggaaggagctccttgtc 1605910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 395 - 504
Target Start/End: Original strand, 38578866 - 38578975
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||||||| ||||||||| ||| ||||||||| |||||  | ||||||||||||||||||| ||| |||| ||  ||| ||||||||||    
T  38578866 ctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttccccctgggaatcgaa 38578965  T
Q  495 cccgatattc 504  Q
    ||||||||||    
T  38578966 cccgatattc 38578975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 416 - 536
Target Start/End: Original strand, 4973130 - 4973250
Alignment:
Q  416 caccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattctccgaataagt 515  Q
    |||||||| ||||||||||||| ||||||   ||||||||||||||| |||||||  ||||||  ||   ||||||||||||||||||| ||||||||||    
T  4973130 caccaaagctggacgactaatccggctcgtacgtagaggcatgcgcattggtcaagtgttattccccgtaggaatcgaacccgatattccccgaataagt 4973229  T
Q  516 ccttcgaaggagctccttgtc 536  Q
    |||| |||| |||||||||||    
T  4973230 ccttggaagaagctccttgtc 4973250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 395 - 534
Target Start/End: Original strand, 43861971 - 43862110
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||| ||||||||||||| || | |||||||| |||||  | ||||||||||||||||||| |||||||| ||  ||| ||||||||||    
T  43861971 ctttcgcaccggttttcgatccaccaaaggtgaatgactaatccggctcatgcgtagaggcatgcgcactggccaaacgttgttccccctgggaatcgaa 43862070  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||| ||||| ||  ||| ||| || ||| ||||||||||    
T  43862071 cccggtattccccagatacgtctttggaaagagctccttg 43862110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 395 - 504
Target Start/End: Complemental strand, 3353534 - 3353426
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||||||||||||||| |||||| ||||| ||||||||||||| |||||| | ||||||||||||||||||| |||| |||  |||||| | |||||||     
T  3353534 ctttcgcaccggtttctgatccatcaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaaatgtt-gtttccctgagaatcgat 3353436  T
Q  495 cccgatattc 504  Q
    ||||||||||    
T  3353435 cccgatattc 3353426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 395 - 532
Target Start/End: Complemental strand, 22974077 - 22973940
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||| |||||||| || ||||||||| |||||||||||||||||||  | ||||| |||||| |||||| ||| |||| ||  ||| | ||||||||    
T  22974077 ctttcgcgccggtttctgacccaccaaaggtggacgactaatctggctcatgcgtagacgcatgcacactggccaagcgttgttccccctgagaatcgaa 22973978  T
Q  495 cccgatattctccgaataagtccttcgaaggagctcct 532  Q
    |||| ||||| |||| || |||||| ||||||||||||    
T  22973977 cccggtattccccgagtacgtccttggaaggagctcct 22973940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 396 - 504
Target Start/End: Original strand, 26423288 - 26423395
Alignment:
Q  396 tttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaac 495  Q
    |||||||||||||||||| ||||||||| || ||||||||||||||||| | ||||||||| | ||||||| ||| |||| ||| ||| |||||||||||    
T  26423288 tttcgcaccggtttccga-ccaccaaaggtgaacgactaatctggctcgtgcgtagaggcaggtgcactggccaagcgttgtttcccctgggaatcgaac 26423386  T
Q  496 ccgatattc 504  Q
    ||| |||||    
T  26423387 ccggtattc 26423395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 395 - 534
Target Start/End: Original strand, 10047875 - 10048014
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||||||| ||||||| | ||||||||||||   ||||  | |||||||| |||||||||| |||  ||| ||  ||| ||||||||||    
T  10047875 ctttcgcaccggtttccgacccaccaatggtggacgactaattctgctcatgcgtagaggcctgcgcactggccaagtgttgttccccctgggaatcgaa 10047974  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||| ||||| ||| ||| |||||| ||||||||||||||    
T  10047975 cccggtattccccggatacgtccttggaaggagctccttg 10048014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 395 - 534
Target Start/End: Original strand, 42210261 - 42210400
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||||||| |||||||||| ||||||| | |||  || ||||| |||||| | ||||||||||||||||||| |||||||| ||||| | ||||||||||    
T  42210261 ctttcgcatcggtttccgacccaccaacggtgggtgattaatccggctcgtgcgtagaggcatgcgcactggccaaacgttgttttcactgggaatcgaa 42210360  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
     ||| |||||  || ||| |||||| ||| ||||||||||    
T  42210361 gccggtattcctcggatacgtccttggaaagagctccttg 42210400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 395 - 534
Target Start/End: Original strand, 8734685 - 8734824
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||||||| ||||||||| ||| |||||||||||||||| | || |||||||||||||||  ||| | || ||  |||  | |||||||    
T  8734685 ctttcgcaccggtttccgacccaccaaaggtgggcgactaatctggctcgtgcgttgaggcatgcgcactgcccaagcattgttcccccaagaaatcgaa 8734784  T
Q  495 cccgatattctccga-ataagtccttcgaaggagctccttg 534  Q
    || ||||||| |||| ||| |||||| ||||||||||||||    
T  8734785 cctgatattc-ccgagatatgtccttggaaggagctccttg 8734824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 395 - 530
Target Start/End: Original strand, 21190779 - 21190914
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||| ||| ||||||  ||||| ||||||||||| |||| | ||||||||||||||||| | ||| ||||  |   ||  |||||||||    
T  21190779 ctttcgcaccggttttcgacccaccattgatgggcgactaatctgactcgtgcgtagaggcatgcgcactagccaagcgttgctcctcctaggaatcgaa 21190878  T
Q  495 cccgatattctccgaataagtccttcgaaggagctc 530  Q
    |||| ||||| ||| |||||||||| ||||||||||    
T  21190879 cccggtattccccggataagtccttggaaggagctc 21190914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 395 - 534
Target Start/End: Original strand, 22993366 - 22993505
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||||||||||||||| || ||||||||| ||  ||||||||| || ||| | |||||||||||| |||||| ||| |||| ||   ||  |||||||||    
T  22993366 ctttcgcaccggtttctgacccaccaaaggtgagcgactaatccggttcgtgcgtagaggcatgcacactggccaagcgttgttcctcctcggaatcgaa 22993465  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||||||||| |||  || |||||| ||||||||||||||    
T  22993466 cccgatattccccgggtacgtccttggaaggagctccttg 22993505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 395 - 478
Target Start/End: Complemental strand, 41945583 - 41945500
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttatt 478  Q
    ||||||||||| |||||||  |||||||| ||||||||||||| |||||| | ||||||||||||||||||| ||| |||||||    
T  41945583 ctttcgcaccgatttccgactcaccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttatt 41945500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 395 - 504
Target Start/End: Complemental strand, 29152050 - 29151941
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||||||| |||||||||| ||| ||| | | ||||| ||||| || ||| | |||||||||||||||||||||||||||| || | || ||||||||||    
T  29152050 ctttcgcatcggtttccgacccatcaatggtagacgattaatccggatcgtgtgtagaggcatgcgcactggtcaaacgttgttcttcctgggaatcgaa 29151951  T
Q  495 cccgatattc 504  Q
    |||| |||||    
T  29151950 cccggtattc 29151941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 395 - 534
Target Start/End: Complemental strand, 13095968 - 13095829
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||| |||||||||||||| ||||||||| ||  ||||||||| |||||  | ||||||||||||||||||| |||  ||| ||  ||| |||||| |||    
T  13095968 cttttgcaccggtttccgacccaccaaaggtgagcgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatagaa 13095869  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||| ||||| |||  || ||||||  |||||||||||||    
T  13095868 cccggtattccccgggtacgtccttgaaaggagctccttg 13095829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 395 - 534
Target Start/End: Complemental strand, 23658289 - 23658151
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||| |||| |||||| || ||||||||||||||||||||||| |||||| | |||||||||||| |||||| ||| |||| ||  ||| || |||||||    
T  23658289 cttttgcacaggtttctgacccaccaaagatggacgactaatccggctcgtgtgtagaggcatgcacactggccaagcgttgttccccctggaaatcgaa 23658190  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |  ||||||| | |  || |||||| ||||||||||||||    
T  23658189 ctggatattccctgggtacgtcctt-gaaggagctccttg 23658151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 395 - 534
Target Start/End: Complemental strand, 34659336 - 34659197
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||| |||  |||||| | ||| ||||||||| |||||| | ||||||||||||||||||||||| |||| ||  ||  | ||||||||    
T  34659336 ctttcgcaccggttttcgacacaccaatggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggtcaagcgttgttccccttgagaatcgaa 34659237  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||| ||||| |||  ||  ||| | ||||||||||||||    
T  34659236 cccggtattccccgggtacatccctggaaggagctccttg 34659197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 395 - 475
Target Start/End: Complemental strand, 48551967 - 48551887
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgtt 475  Q
    ||||||||||||||||||||||| ||||| ||||||||||||| |||||    ||||||||||||||| ||| ||| ||||    
T  48551967 ctttcgcaccggtttccgatccatcaaaggtggacgactaatccggctcatacgtagaggcatgcgcattggccaaccgtt 48551887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 395 - 534
Target Start/End: Complemental strand, 14650427 - 14650288
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||| | | ||||||||| ||  ||||||| | |||||  | ||||||||||  ||||||||||| | || ||   || || |||||||    
T  14650427 ctttcgcaccggttttcaacccaccaaaggtgagcgactaacccggctcatgcgtagaggcatatgcactggtcaagcattgttcctcctggaaatcgaa 14650328  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    ||||||||||||||  || |||||| ||||||||||||||    
T  14650327 cccgatattctccgggtacgtccttggaaggagctccttg 14650288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 395 - 534
Target Start/End: Complemental strand, 47341986 - 47341847
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||| ||||||| ||||||| | || ||||| ||||  ||||| | ||||||||||||||||||| |||  ||| ||  ||| ||||||||||    
T  47341986 ctttcgcaccgatttccgacccaccaatggtgaacgaccaatcctgctcgtgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaa 47341887  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    | || ||||| |||  || |||||| ||| ||||||||||    
T  47341886 ctcggtattccccgggtacgtccttggaatgagctccttg 47341847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 397 - 534
Target Start/End: Complemental strand, 18785777 - 18785640
Alignment:
Q  397 ttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacc 496  Q
    ||||||||||||||||| |||||| || || ||||||||||  | ||  | ||||||||||||||||||| |||  ||| ||  |||  |||||||||||    
T  18785777 ttcgcaccggtttccgacccaccagaggtgaacgactaatccagttcatgcgtagaggcatgcgcactggccaagtgttgttccccctaggaatcgaacc 18785678  T
Q  497 cgatattctccgaataagtccttcgaaggagctccttg 534  Q
    || ||||| |||  || |||||| ||||||||| ||||    
T  18785677 cggtattccccgggtacgtccttggaaggagcttcttg 18785640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 395 - 463
Target Start/End: Original strand, 43346778 - 43346846
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcac 463  Q
    ||||||||| ||||||||| ||||||||||||  ||||||||| ||||||   ||||||||||||||||    
T  43346778 ctttcgcactggtttccgacccaccaaagatgagcgactaatccggctcgtacgtagaggcatgcgcac 43346846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 395 - 534
Target Start/End: Original strand, 4195201 - 4195340
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||||||| |||||||| | ||||||| | |||||| |||||| |||||  | ||||||||||||||||| | |||| ||| ||   || || |||||||    
T  4195201 ctttcgcatcggtttccaacccaccaatggtggacggctaatccggctcatgcgtagaggcatgcgcactagccaaatgttgttcctcctggaaatcgaa 4195300  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    | || ||||| ||| ||| |||||| | ||||||||||||    
T  4195301 ctcggtattccccggatacgtccttggcaggagctccttg 4195340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 395 - 466
Target Start/End: Complemental strand, 27028389 - 27028318
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactgg 466  Q
    ||||||||||||||||||| ||||||||| ||  |||||||||  ||||  | |||||||||||||||||||    
T  27028389 ctttcgcaccggtttccgacccaccaaaggtgagcgactaatccagctcatgtgtagaggcatgcgcactgg 27028318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 395 - 466
Target Start/End: Complemental strand, 28744272 - 28744201
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactgg 466  Q
    |||||||||| |||||||| ||||||||| ||||||||||||| ||||||   ||||||| ||||| |||||    
T  28744272 ctttcgcaccagtttccgacccaccaaaggtggacgactaatccggctcgtatgtagaggtatgcgtactgg 28744201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 395 - 458
Target Start/End: Complemental strand, 32769047 - 32768984
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatg 458  Q
    ||||| ||||||||||||||||||||||| || |||||||||| | |||| | |||||||||||    
T  32769047 ctttcacaccggtttccgatccaccaaaggtgaacgactaatccgactcgtgcgtagaggcatg 32768984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 415 - 534
Target Start/End: Original strand, 36619273 - 36619392
Alignment:
Q  415 ccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattctccgaataag 514  Q
    ||||||| | ||||||||||||| |||||  | |||||||||||| |||||| |||  ||| ||  ||| |||||||||||||| ||||| || |||| |    
T  36619273 ccaccaatggtggacgactaatccggctcatgcgtagaggcatgcacactggacaagtgttgttccccctgggaatcgaacccggtattccccaaatacg 36619372  T
Q  515 tccttcgaaggagctccttg 534  Q
    |||||  |||||| ||||||    
T  36619373 tccttgcaaggagttccttg 36619392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 425 - 504
Target Start/End: Complemental strand, 44336973 - 44336894
Alignment:
Q  425 tggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattc 504  Q
    ||||||| | ||||| |||| | ||||||||||||||||||  ||||||||||||| || || |||||||| ||||||||    
T  44336973 tggacgatttatctgactcgtgcgtagaggcatgcgcactgaccaaacgttatttttcctggaaatcgaactcgatattc 44336894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 395 - 465
Target Start/End: Complemental strand, 3603467 - 3603397
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactg 465  Q
    ||||||||||| ||||||| ||||||||  || |||| ||||| |||||| | ||||||||||||||||||    
T  3603467 ctttcgcaccgatttccgacccaccaaaagtgaacgattaatccggctcgtgcgtagaggcatgcgcactg 3603397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 404 - 533
Target Start/End: Original strand, 41267932 - 41268062
Alignment:
Q  404 cggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttcccc-gggaatcgaacccgatat 502  Q
    |||||||||| ||| ||||| ||||||||||||||  |||  | |||||||||||| ||||  |||| ||||||| |||||    |||||||| ||||||    
T  41267932 cggtttccgacccatcaaaggtggacgactaatctaactcatgcgtagaggcatgcacactaatcaagcgttattctcccctaaaaatcgaactcgatat 41268031  T
Q  503 tctccgaataagtccttcgaaggagctcctt 533  Q
    ||| |||||| || ||| |||| ||||||||    
T  41268032 tcttcgaatacgttctttgaagaagctcctt 41268062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 395 - 464
Target Start/End: Original strand, 5069814 - 5069883
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcact 464  Q
    |||||||| |||||||||| ||||||||| ||| ||||||||| |||| | | |||||||||||| ||||    
T  5069814 ctttcgcatcggtttccgacccaccaaaggtgggcgactaatccggcttgtgcgtagaggcatgcacact 5069883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 395 - 504
Target Start/End: Original strand, 10317745 - 10317853
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||||||||||||||||| ||  |||||||||| |||   |  ||||||||| |||||||  |||  ||||||  ||| ||||||||||    
T  10317745 ctttcgcaccggtttccgatccaccaaaggtgagcgactaatct-gcttatgcatagaggcatacgcactgaccaagtgttattccccctgggaatcgaa 10317843  T
Q  495 cccgatattc 504  Q
    |||| |||||    
T  10317844 cccggtattc 10317853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 395 - 504
Target Start/End: Complemental strand, 22573922 - 22573814
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||| | | ||| ||| ||||||||| ||||| |||||  | ||| |||||||||||||||||||| |||  || ||| |  |||||||    
T  22573922 ctttcgcaccggttttcaacccatcaatgatggacgattaatccggctcatgcgtaaaggcatgcgcactggtcaaatgtt-gttcccctgaaaatcgaa 22573824  T
Q  495 cccgatattc 504  Q
    ||||||||||    
T  22573823 cccgatattc 22573814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 405 - 533
Target Start/End: Complemental strand, 20097289 - 20097161
Alignment:
Q  405 ggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattc 504  Q
    ||||||||||||| ||| ||||||||||||||||  |||| | ||||||||||| | | || |||||| || || |||| | ||||| ||| |  ||||     
T  20097289 ggtttccgatccatcaaggatggacgactaatctaactcgtgcgtagaggcatgtgtattgatcaaacattgttctccctgtgaatcaaactcagtattt 20097190  T
Q  505 tccgaataagtccttcgaaggagctcctt 533  Q
    ||||| || ||| || |||||||||||||    
T  20097189 tccgagtacgtcattggaaggagctcctt 20097161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 439
Target Start/End: Original strand, 22268040 - 22268084
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctg 439  Q
    ||||||||||||||||||||||||||||| ||  |||||||||||    
T  22268040 ctttcgcaccggtttccgatccaccaaaggtgagcgactaatctg 22268084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 396 - 504
Target Start/End: Original strand, 27875088 - 27875196
Alignment:
Q  396 tttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaac 495  Q
    |||||||||||||| ||| |||| |||| ||||||||||||  | |||  | ||||||||||| ||||||| |||  ||||||  ||| ||||||||||     
T  27875088 tttcgcaccggttttcgacccactaaaggtggacgactaatgcgactcatgcgtagaggcatgtgcactggccaagtgttattccccctgggaatcgaat 27875187  T
Q  496 ccgatattc 504  Q
    ||| |||||    
T  27875188 ccggtattc 27875196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 534
Target Start/End: Complemental strand, 43925622 - 43925483
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||| || ||||||| |||||| ||||| |  || |||||||  ||||  | ||||||||||||||||||  |||  ||| ||  ||| ||||||||||    
T  43925622 ctttcacatcggtttctgatccatcaaaggtaaacaactaatccagctcatgcgtagaggcatgcgcactgaccaagtgttgttccccctgggaatcgaa 43925523  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||| ||||| |||  || |||||| ||||||||||||||    
T  43925522 cccggtattccccgggtacgtccttggaaggagctccttg 43925483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 470
Target Start/End: Original strand, 48244355 - 48244430
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaa 470  Q
    ||||||||||||||| ||||||||||||| ||  ||||||||| |||||  | |||||||||  ||||||| ||||    
T  48244355 ctttcgcaccggttttcgatccaccaaaggtgagcgactaatccggctcatgcgtagaggcaaacgcactgatcaa 48244430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 395 - 464
Target Start/End: Original strand, 24983417 - 24983487
Alignment:
Q  395 ctttcgcaccggtttcc-gatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcact 464  Q
    |||||||| |||||||| || ||||||| | ||||||||||||| |||||  | |||||||||||||||||    
T  24983417 ctttcgcatcggtttccagacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcact 24983487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 395 - 465
Target Start/End: Complemental strand, 39475050 - 39474980
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactg 465  Q
    ||||||||| ||||| ||| |||| |||| ||||||||||||| |||||  | ||||||| ||||||||||    
T  39475050 ctttcgcactggttttcgacccactaaaggtggacgactaatccggctcatgcgtagaggtatgcgcactg 39474980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 463
Target Start/End: Original strand, 28396166 - 28396227
Alignment:
Q  402 accggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcac 463  Q
    |||||||||||| ||||||||| | ||||||||||| |||||  | ||| ||||||||||||    
T  28396166 accggtttccgacccaccaaaggtagacgactaatccggctcatgcgtaaaggcatgcgcac 28396227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 536
Target Start/End: Complemental strand, 37515031 - 37514890
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||| ||||||||||||| |||| || | || |||| ||||| |||||| | |||||| |||||||||||  |||||||| ||  | | |  |||||||    
T  37515031 ctttcacaccggtttccgacccactaatggtgaacgattaatccggctcgtgcgtagagacatgcgcactgaccaaacgttgttcccactgaaaatcgaa 37514932  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttgtc 536  Q
    |||  ||||| |||  || |||||| ||||||||| ||||||    
T  37514931 cccagtattccccgggtatgtccttggaaggagctacttgtc 37514890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 465
Target Start/End: Original strand, 45960007 - 45960072
Alignment:
Q  400 gcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactg 465  Q
    |||||||||||||||||| ||||| ||  ||||||||| ||||   | ||||||||||||||||||    
T  45960007 gcaccggtttccgatccatcaaaggtgagcgactaatccggcttatgcgtagaggcatgcgcactg 45960072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 395 - 423
Target Start/End: Complemental strand, 12422155 - 12422127
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaag 423  Q
    |||||||||||||||||||||||||||||    
T  12422155 ctttcgcaccggtttccgatccaccaaag 12422127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 395 - 475
Target Start/End: Complemental strand, 39420947 - 39420867
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgtt 475  Q
    |||| |||||||||||||  ||| ||||| | ||||||||||| |||||  | ||||||||| ||||||||| ||| ||||    
T  39420947 cttttgcaccggtttccggcccatcaaaggtagacgactaatccggctcatgcgtagaggcacgcgcactggccaagcgtt 39420867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 64; Significance: 1e-27; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 395 - 534
Target Start/End: Original strand, 13036003 - 13036142
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||||||| |||||||   |||||||||||||||||||  | ||||||||||||||||||| |||  ||| ||  ||| |  |||||||    
T  13036003 ctttcgcaccggtttccgacccaccaatagtggacgactaatctggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgaaaatcgaa 13036102  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||||||||| ||||||| |||||| ||||||||||||||    
T  13036103 cccgatattccccgaatacgtccttggaaggagctccttg 13036142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 395 - 534
Target Start/End: Complemental strand, 21898759 - 21898620
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||||||| |||| |||| || |||||||||| |||||  | ||||||||||||||||||| ||| |||| ||   || ||||||||||    
T  21898759 ctttcgcaccggtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctgggaatcgaa 21898660  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||| ||||| ||| ||| |||||| ||||||||||||||    
T  21898659 cccggtattccccggatacgtccttggaaggagctccttg 21898620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 395 - 534
Target Start/End: Original strand, 30788852 - 30788989
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||||||| ||||||||| ||| ||||||||| |||||| |  |||||||||||||||||| |||||||| ||  ||  | ||||| ||    
T  30788852 ctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcctagaggcatgcgcactggccaaacgttgtt--ccatgagaatcaaa 30788949  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||||||||| ||| |||  ||||| ||||||||||||||    
T  30788950 cccgatattccccggatacatccttggaaggagctccttg 30788989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 395 - 534
Target Start/End: Original strand, 5253222 - 5253361
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||||||| ||||||||| ||| ||| ||||| |||||  | ||||||||||||||||||| |||  ||| ||  ||| ||||||||||    
T  5253222 ctttcgcaccggtttccgacccaccaaaggtgggcgattaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaa 5253321  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||| ||||| |||  || |||||| ||||||||||||||    
T  5253322 cccggtattccccgggtacgtccttggaaggagctccttg 5253361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 395 - 534
Target Start/End: Original strand, 14107357 - 14107496
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||||||| |||| ||  |||| ||||||||| |||||  | ||||||||||| ||||||||||| |||| ||   || ||||||||||    
T  14107357 ctttcgcaccggtttccgacccactaataatgggcgactaatccggctcatgcgtagaggcatgtgcactggtcaagcgttgttcctcctgggaatcgaa 14107456  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||| ||||| ||||||| ||| || ||||||||||||||    
T  14107457 cccggtattccccgaatacgtctttggaaggagctccttg 14107496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 395 - 512
Target Start/End: Complemental strand, 3601195 - 3601078
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||||||| ||||||||| ||||||||||||| |||||| | ||| ||||||||||||||| ||| |||| ||  ||| | ||||||||    
T  3601195 ctttcgcaccggtttccgacccaccaaaggtggacgactaatccggctcgtgtgtataggcatgcgcactggccaagcgttgttccccctgagaatcgaa 3601096  T
Q  495 cccgatattctccgaata 512  Q
     ||| ||||| |||||||    
T  3601095 accggtattccccgaata 3601078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 395 - 534
Target Start/End: Original strand, 6606096 - 6606235
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||||||| ||||||| | ||||||||||||| |||||  | |||||||||||  |||||| |||  ||| ||  ||| | ||||||||    
T  6606096 ctttcgcaccggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgtacactggccaagtgttgttccccctgagaatcgaa 6606195  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||| ||||| ||| ||| |||||| ||||||||||||||    
T  6606196 cccggtattccccggatacgtccttggaaggagctccttg 6606235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 395 - 475
Target Start/End: Original strand, 9633624 - 9633704
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgtt 475  Q
    ||||||||||||||||||| ||||||||| ||| ||||||||| |||||| | ||||||||||||||||||| ||| ||||    
T  9633624 ctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgtt 9633704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 396 - 536
Target Start/End: Complemental strand, 11142713 - 11142573
Alignment:
Q  396 tttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaac 495  Q
    |||||||||||| ||||| ||||||||| ||||| ||||||||| |||  | |||||||||||||||||||||||||||| ||| | | | |||||||||    
T  11142713 tttcgcaccggtctccgacccaccaaagttggacaactaatctgactcatgcgtagaggcatgcgcactggtcaaacgttgtttccactgcgaatcgaac 11142614  T
Q  496 ccgatattctccgaataagtccttcgaaggagctccttgtc 536  Q
     || ||||  |||  || |||||| ||| ||||| ||||||    
T  11142613 tcggtatttcccgggtatgtccttggaatgagcttcttgtc 11142573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 395 - 534
Target Start/End: Complemental strand, 13469044 - 13468905
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||||| | ||||||| | ||| |||||||||||||||| | ||||||||||| ||||||  ||| |||| ||  |||  ||||| |||    
T  13469044 ctttcgcaccggtttccaacccaccaatggtgggcgactaatctggctcgtgcgtagaggcatgtgcactgaccaatcgttgttccccctaggaattgaa 13468945  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    || | ||||| ||| ||| |||||| ||||||||||||||    
T  13468944 cctggtattccccggatacgtccttggaaggagctccttg 13468905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 396 - 470
Target Start/End: Original strand, 32157167 - 32157241
Alignment:
Q  396 tttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaa 470  Q
    |||| |||||||||| ||||||||||||||||| ||||||||||||||  | ||||||| |||||||||||||||    
T  32157167 tttcacaccggtttctgatccaccaaagatggatgactaatctggctcatgcgtagaggtatgcgcactggtcaa 32157241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 395 - 528
Target Start/End: Complemental strand, 12635925 - 12635792
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||||||| |||||||   ||| ||||||||| |||| | | ||||||||||||||||| | ||| |||| ||| ||| ||||||| ||    
T  12635925 ctttcgcaccggtttccgacccaccaatagtgggcgactaatccggcttgtgcgtagaggcatgcgcactagccaagcgttgtttcccctgggaatcaaa 12635826  T
Q  495 cccgatattctccgaataagtccttcgaaggagc 528  Q
    || | ||||| ||| ||| |||||| ||||||||    
T  12635825 cctggtattccccggatacgtccttggaaggagc 12635792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 400 - 534
Target Start/End: Original strand, 2271307 - 2271439
Alignment:
Q  400 gcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccga 499  Q
    |||| |||||| || ||| ||||| ||||||||||||| |||||| | |||||| ||||||||||||  || |||| || ||   | ||||||||||||     
T  2271307 gcactggtttctgacccatcaaaggtggacgactaatccggctcgtgcgtagagacatgcgcactggctaagcgttgttctct--gagaatcgaacccgg 2271404  T
Q  500 tattctccgaataagtccttcgaaggagctccttg 534  Q
    ||||| ||||||| |||||| ||||||||||||||    
T  2271405 tattccccgaatacgtccttggaaggagctccttg 2271439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 395 - 534
Target Start/End: Original strand, 8611973 - 8612112
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||||||||||||||| || ||||||||| ||| ||||||||| || ||  | ||||| |||||| |||||||||| |||| ||   ||  |||||||||    
T  8611973 ctttcgcaccggtttctgacccaccaaaggtgggcgactaatccggttcatgcgtagaagcatgcacactggtcaagcgttgttcctcctcggaatcgaa 8612072  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||| ||||| |||  || |||||| ||||||||||||||    
T  8612073 cccggtattccccgggtacgtccttggaaggagctccttg 8612112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 395 - 534
Target Start/End: Complemental strand, 8932772 - 8932633
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||||||| ||| ||||| |||  || ||||| |||||  | ||||||||||||||||| | |||  ||| ||  ||| ||||||||||    
T  8932772 ctttcgcaccggtttccgacccatcaaaggtgggtgattaatccggctcatgcgtagaggcatgcgcactagccaagtgttgttccccctgggaatcgaa 8932673  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||||||||| ||| |||  ||||| |||||| |||||||    
T  8932672 cccgatattccccggatacatccttggaaggaactccttg 8932633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 395 - 534
Target Start/End: Complemental strand, 8944238 - 8944099
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||||||| ||| ||||| |||  || ||||| |||||  | ||||||||||||||||| | |||  ||| ||  ||| ||||||||||    
T  8944238 ctttcgcaccggtttccgacccatcaaaggtgggtgattaatccggctcatgcgtagaggcatgcgcactagccaagtgttgttccccctgggaatcgaa 8944139  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||||||||| ||| |||  ||||| |||||| |||||||    
T  8944138 cccgatattccccggatacatccttggaaggaactccttg 8944099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 395 - 530
Target Start/End: Complemental strand, 12606541 - 12606406
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||||||||||||||||    |||||||| ||| ||||||||| |||||| | ||||||||||||||||||| |||||||| ||  ||| || |||||||    
T  12606541 ctttcgcaccggtttccagctcaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaa 12606442  T
Q  495 cccgatattctccgaataagtccttcgaaggagctc 530  Q
     | | ||||| ||| ||| || ||| ||||||||||    
T  12606441 tctggtattccccggatacgttcttggaaggagctc 12606406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 395 - 466
Target Start/End: Complemental strand, 19089609 - 19089538
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactgg 466  Q
    ||||||||||||||||||| ||||||||| | ||||||||||| |||||| | |||||||||||| ||||||    
T  19089609 ctttcgcaccggtttccgacccaccaaaggtagacgactaatccggctcgtgcgtagaggcatgctcactgg 19089538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 395 - 534
Target Start/End: Original strand, 29444764 - 29444903
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||||||||  |||||||| ||||||||||||||| ||||||| |||||  | ||||||||||||||||||| ||| |||| ||  |||  | |||||||    
T  29444764 ctttcgcactagtttccgacccaccaaagatggacaactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttccccctagaaatcgaa 29444863  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||| ||| | |||  || ||| || ||||||||||||||    
T  29444864 cccggtatcccccgggtacgtctttggaaggagctccttg 29444903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 395 - 534
Target Start/End: Original strand, 34954618 - 34954757
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||  ||||||||| ||| ||||| |||||||||||||||||||  | ||||||| ||| ||||||| |||||||| ||  ||| | ||||||||    
T  34954618 ctttcgcattggtttccgacccatcaaaggtggacgactaatctggctcatgcgtagaggtatgtgcactggccaaacgttgttccccctgagaatcgaa 34954717  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    || | ||||| ||   || |||||| ||||||||||||||    
T  34954718 cctggtattccccaggtacgtccttggaaggagctccttg 34954757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 395 - 500
Target Start/End: Complemental strand, 5029928 - 5029823
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||||||||| |||||||| ||| ||||||||| |||||||||   |||  | ||||||||||||||||||  |||||||| || |||| | ||||||||    
T  5029928 ctttcgcaccagtttccgacccatcaaagatgggcgactaatccaactcatgcgtagaggcatgcgcactgaccaaacgttgttctccctgagaatcgaa 5029829  T
Q  495 cccgat 500  Q
    ||||||    
T  5029828 cccgat 5029823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 395 - 536
Target Start/End: Complemental strand, 8938822 - 8938681
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||||||| ||| ||||| ||||||||||||  |||||  | ||||| || ||||||||||||||  ||| ||   || ||||||||||    
T  8938822 ctttcgcaccggtttccgacccatcaaaggtggacgactaattcggctcatgcgtagatgcttgcgcactggtcaagtgttgttcctcctgggaatcgaa 8938723  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttgtc 536  Q
    ||   ||||| ||| ||| ||| || ||||||||||||||||    
T  8938722 ccaagtattccccggatatgtctttggaaggagctccttgtc 8938681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 395 - 534
Target Start/End: Original strand, 9179735 - 9179874
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||||| |||| ||||||||||||||||| |||||||||||||  ||||  | ||||||| ||||  |||||||||  ||| ||  ||| ||||||||||    
T  9179735 ctttcggaccgatttccgatccaccaaaggtggacgactaatccagctcatgcgtagaggtatgcatactggtcaagtgttgttccccctgggaatcgaa 9179834  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||| ||||| | |  || |||||| ||| ||||||||||    
T  9179835 cccggtattccctgggtacgtccttggaatgagctccttg 9179874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 395 - 530
Target Start/End: Original strand, 29333138 - 29333272
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||||||||||||| |||| | ||||||| ||||||||| ||  |||||  | ||||||||||||||||||| ||||||||  || ||| || |||||||    
T  29333138 ctttcgcaccggttaccgacctaccaaaggtggacgactgattcggctcatgcgtagaggcatgcgcactggccaaacgtt-gttcccctggaaatcgaa 29333236  T
Q  495 cccgatattctccgaataagtccttcgaaggagctc 530  Q
    |||| ||||| | |  || |||||| ||||||||||    
T  29333237 cccggtattccctgggtacgtccttggaaggagctc 29333272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 395 - 464
Target Start/End: Original strand, 14783419 - 14783488
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcact 464  Q
    ||||||||||||||||||| ||||||| | ||||||||||||| |||||  | |||||||||||| ||||    
T  14783419 ctttcgcaccggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcacact 14783488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 395 - 464
Target Start/End: Complemental strand, 31129288 - 31129219
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcact 464  Q
    |||||||||||||||||||  |||||||| || || |||||||||||||  | |||||||||||||||||    
T  31129288 ctttcgcaccggtttccgactcaccaaaggtgcacaactaatctggctcatgcgtagaggcatgcgcact 31129219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 395 - 534
Target Start/End: Original strand, 24671865 - 24672004
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||| ||||| ||||||| ||| |||||  |||| ||||||| |||| | | |||||||||||| ||||||||||  ||| ||  | | |||||| |||    
T  24671865 ctttcacaccgatttccgaaccatcaaaggcggactactaatccggcttgtgcgtagaggcatgcacactggtcaagtgttgttccctctgggaatagaa 24671964  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||| ||||||||  ||| ||||||  |||||||||||||    
T  24671965 cccggtattctccagatacgtccttgaaaggagctccttg 24672004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 395 - 508
Target Start/End: Original strand, 3587944 - 3588057
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||||||| | |||||||||||| ||||| | ||||||||||| || ||  | ||||||| ||| ||||||| ||| |||| ||  ||  ||||||||||    
T  3587944 ctttcgcatcagtttccgatccatcaaaggttgacgactaatccggttcatgcgtagaggtatgtgcactggccaagcgttgttccccttgggaatcgaa 3588043  T
Q  495 cccgatattctccg 508  Q
    |||| |||||||||    
T  3588044 cccggtattctccg 3588057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 395 - 472
Target Start/End: Complemental strand, 13391397 - 13391320
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaac 472  Q
    |||| |||||||||| ||| |||  ||| |||| ||||||||| |||||| | ||||||||||||||||||| |||||    
T  13391397 cttttgcaccggttttcgacccattaaatatgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaaac 13391320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 396 - 504
Target Start/End: Original strand, 8149797 - 8149904
Alignment:
Q  396 tttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaac 495  Q
    |||||||||||||||| | ||||||||| ||||||||||||  ||||   | ||||||||||| ||| ||||||||  || || | ||  ||||||||||    
T  8149797 tttcgcaccggtttccaacccaccaaaggtggacgactaattcggctaatgcgtagaggcatgtgcattggtcaaatattgttct-cctaggaatcgaac 8149895  T
Q  496 ccgatattc 504  Q
    |||||||||    
T  8149896 ccgatattc 8149904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 432 - 536
Target Start/End: Original strand, 9366459 - 9366563
Alignment:
Q  432 ctaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattctccgaataagtccttcgaaggagctcc 531  Q
    |||||| |||||| | ||||||||||||||||||| ||| |||||||  |||    ||||||||| ||||||| || | ||  ||||| |||||||||||    
T  9366459 ctaatccggctcgtgcgtagaggcatgcgcactggccaagcgttattccccctaaaaatcgaacctgatattccccaagtacatccttggaaggagctcc 9366558  T
Q  532 ttgtc 536  Q
    |||||    
T  9366559 ttgtc 9366563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 467
Target Start/End: Complemental strand, 30410556 - 30410484
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggt 467  Q
    |||||||| |||||||||| ||||||||||||  ||| |||||  ||||  | ||||||||||||||||||||    
T  30410556 ctttcgcatcggtttccgacccaccaaagatgagcgattaatccagctcatgcgtagaggcatgcgcactggt 30410484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 419 - 467
Target Start/End: Complemental strand, 33940098 - 33940050
Alignment:
Q  419 caaagatggacgactaatctggctcgcgagtagaggcatgcgcactggt 467  Q
    ||||||||||||||||||| |||||| | ||||||||||||||| ||||    
T  33940098 caaagatggacgactaatccggctcgtgtgtagaggcatgcgcaatggt 33940050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 534
Target Start/End: Original strand, 10311468 - 10311607
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||||||||| |||| ||| ||||||| | ||  ||||||||||  |||| | |||||| |||||||||||| ||| |||| ||  ||  | | ||||||    
T  10311468 ctttcgcaccagttttcgacccaccaatggtgagcgactaatctaactcgtgcgtagagacatgcgcactggccaagcgttgttccccttgaggatcgaa 10311567  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||| ||||| ||| ||| || ||| ||||||||||||||    
T  10311568 cccggtattccccggatacgttcttggaaggagctccttg 10311607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 405 - 475
Target Start/End: Complemental strand, 8888983 - 8888913
Alignment:
Q  405 ggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgtt 475  Q
    ||||| ||||||| ||||| ||||||||||||| | |||  | ||||||| ||||||||||| ||||||||    
T  8888983 ggttttcgatccatcaaaggtggacgactaatccgactcatgcgtagaggtatgcgcactggccaaacgtt 8888913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 395 - 475
Target Start/End: Original strand, 13584445 - 13584529
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctc--gc--gagtagaggcatgcgcactggtcaaacgtt 475  Q
    ||||||| ||||||||||| ||||||||| ||||||| ||||| |||||  ||  |  |||||||||||||||||| ||||||||    
T  13584445 ctttcgcgccggtttccgacccaccaaaggtggacgattaatccggctcatgcatgcatagaggcatgcgcactggccaaacgtt 13584529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 6e-23; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 395 - 534
Target Start/End: Original strand, 14666070 - 14666209
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||| ||| |||||||   ||| |||||||||||||| | | ||||||||||||||||||| |||  ||| ||| ||| ||||||||||    
T  14666070 ctttcgcaccggttttcgacccaccaactgtgggcgactaatctggcttgtgcgtagaggcatgcgcactggccaagtgttgtttcccctgggaatcgaa 14666169  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||| ||||| ||| ||| |||||| ||| ||||||||||    
T  14666170 cccggtattccccggatacgtccttggaatgagctccttg 14666209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 395 - 503
Target Start/End: Complemental strand, 43033012 - 43032904
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||||||||||||||| || ||||||||| ||| ||||||||| |||||| | ||||||||||||||||||| ||| |||| ||  ||| ||||||||||    
T  43033012 ctttcgcaccggtttctgacccaccaaaggtgggcgactaatccggctcgtgtgtagaggcatgcgcactggccaagcgttgttccccctgggaatcgaa 43032913  T
Q  495 cccgatatt 503  Q
     ||||||||    
T  43032912 tccgatatt 43032904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 395 - 534
Target Start/End: Complemental strand, 8141213 - 8141074
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||||||| ||||||| || ||||||||  ||||||||||||   ||||  | ||||||||||||||||||| ||| |||| ||| ||| || |||||||    
T  8141213 ctttcgcatcggtttctgacccaccaaatgtggacgactaattcagctcatgcgtagaggcatgcgcactggccaagcgttgtttcccctggaaatcgaa 8141114  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||| ||||| ||||||| |||||| |||| |||||||||    
T  8141113 cccggtattccccgaatacgtccttggaagcagctccttg 8141074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 395 - 534
Target Start/End: Original strand, 8997543 - 8997682
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||  | ||| ||||||||| |||||  ||||||| ||  ||   |||||||||    
T  8997543 ctttcgcaccggtttccgacccaccaaagatgaacgactaatctggctcatgcgtataggcatgcgaactggcgaaacgttgttccccttaggaatcgaa 8997642  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    | || ||||| ||||||| ||||||  |||||| ||||||    
T  8997643 cacggtattccccgaatatgtccttgaaaggagttccttg 8997682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 395 - 534
Target Start/End: Complemental strand, 24837353 - 24837214
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||||||||| |||||||||||||||||| |||||||||||||  ||||| |  ||||||||||  |||||| ||| |||| || |||| ||||||||||    
T  24837353 ctttcgcaccagtttccgatccaccaaaggtggacgactaatcctgctcgtgcttagaggcatgaacactggccaagcgttgttctccctgggaatcgaa 24837254  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    | || ||||| |||  || || ||| ||||||||||||||    
T  24837253 cacggtattccccgggtacgtacttggaaggagctccttg 24837214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 395 - 556
Target Start/End: Original strand, 9859994 - 9860156
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||| ||| |||||||||||||||||| | |||||||||||||||||||  | |||||||||||| |||||| |||  ||| ||  ||| ||||||||||    
T  9859994 cttttgcatcggtttccgatccaccaatggtggacgactaatctggctcatgtgtagaggcatgcacactggccaagtgttgttccccctgggaatcgaa 9860093  T
Q  495 cccgatatt-ctccgaataagtccttcgaaggagctccttgtcgaaggatcccaaacatcttg 556  Q
    |||| |||| | ||| ||| |||||| |||||||||| ||| |   |||||||||||| ||||    
T  9860094 cccggtattcccccggatacgtccttggaaggagctctttgccactggatcccaaacaacttg 9860156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 396 - 533
Target Start/End: Original strand, 15884556 - 15884692
Alignment:
Q  396 tttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaac 495  Q
    |||||||||||||||||| ||||||||| ||| ||||||||| |||||| | ||||||||||||||||| | |||  |||  || ||| |||||||||||    
T  15884556 tttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcacttgccaagtgtt-gttcccctgggaatcgaac 15884654  T
Q  496 ccgatattctccgaataagtccttcgaaggagctcctt 533  Q
    ||| ||||| ||   || |||||| |||||||||||||    
T  15884655 ccggtattccccaggtacgtccttggaaggagctcctt 15884692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 395 - 496
Target Start/End: Complemental strand, 18374121 - 18374020
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||| |||||||||| ||| ||||||||| ||||||||||||| |||||  | ||||||||||||||||||||||| |||| || |||| | ||||||||    
T  18374121 cttttgcaccggttttcgacccaccaaagttggacgactaatccggctcatgcgtagaggcatgcgcactggtcaagcgttgttctccctgagaatcgaa 18374022  T
Q  495 cc 496  Q
    ||    
T  18374021 cc 18374020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 396 - 505
Target Start/End: Original strand, 4479296 - 4479404
Alignment:
Q  396 tttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaac 495  Q
    |||||||||||||||||| ||||||||| |||||||||||||  ||||  | ||||||||||||||||||| ||| ||||  || ||| ||||||||||     
T  4479296 tttcgcaccggtttccgacccaccaaaggtggacgactaatccagctcatgcgtagaggcatgcgcactggccaagcgtt-gttcccctgggaatcgaat 4479394  T
Q  496 ccgatattct 505  Q
    ||| ||||||    
T  4479395 ccggtattct 4479404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 395 - 534
Target Start/End: Original strand, 2467117 - 2467256
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||||||||||||||||||  ||||||   ||||||||||||| |||||  |  ||||| |||||||||||| |||  ||| ||  ||| || |||||||    
T  2467117 ctttcgcaccggtttccgacacaccaattgtggacgactaatccggctcatgcatagagacatgcgcactggccaagagttgttccccctggaaatcgaa 2467216  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||| ||||| ||| ||| |||||| ||||||||||||||    
T  2467217 cccggtattccccggatacgtccttggaaggagctccttg 2467256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 395 - 534
Target Start/End: Complemental strand, 6100583 - 6100444
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||||||| |||||| ||| |||| |||| || |||||||||| |||||  | |||| |||||||||||||| ||| |||| ||   || ||||||||||    
T  6100583 ctttcgcagcggttttcgacccactaaaggtgaacgactaatccggctcatgcgtagtggcatgcgcactggccaagcgttgttcctcctgggaatcgaa 6100484  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||| ||||| ||| ||| ||||||  |||||||||||||    
T  6100483 cccggtattccccggatacgtccttgaaaggagctccttg 6100444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 395 - 497
Target Start/End: Complemental strand, 43027416 - 43027314
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||||||| |||||||||| ||| ||||||||||||||||||| |||||  | ||||||||||||||| ||| ||| |||| ||   || ||||||||||    
T  43027416 ctttcgcatcggtttccgacccatcaaagatggacgactaatccggctcatgcgtagaggcatgcgcattggacaatcgttgttcctcctgggaatcgaa 43027317  T
Q  495 ccc 497  Q
    |||    
T  43027316 ccc 43027314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 395 - 534
Target Start/End: Complemental strand, 583923 - 583786
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||||  ||||| ||||| ||| ||||||||| | |||  | ||||||||||||||||||||||| |||  | |||||  |||||||||    
T  583923 ctttcgcaccggtttctaatccatcaaaggtgggcgactaatccgactcatgcgtagaggcatgcgcactggtcaagcgt--tgttccctaggaatcgaa 583826  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||| ||||   ||| || |||||| |||| |||||||||    
T  583825 cccggtatttctcgagtacgtccttggaagtagctccttg 583786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 395 - 534
Target Start/End: Original strand, 68097 - 68236
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||| |||||||||||||| ||| ||||| || |||| ||||| |||||| | ||| ||||||||  ||||| |||||||| ||   || | ||||||||    
T  68097 cttttgcaccggtttccgacccatcaaaggtgaacgattaatccggctcgtgtgtaaaggcatgcatactggccaaacgttgttcctcctgagaatcgaa 68196  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||||| ||| ||||  | |||||| ||||||||||||||    
T  68197 cccgatcttccccgagcacgtccttggaaggagctccttg 68236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 395 - 534
Target Start/End: Original strand, 3418512 - 3418651
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||||||||||||||| || |||| |||| ||||||||||||||| |||  | ||||| ||||||||||||| |||  ||| ||   ||    |||||||    
T  3418512 ctttcgcaccggtttctgacccactaaaggtggacgactaatctgactcatgcgtagacgcatgcgcactggccaagtgttgttcctcctaaaaatcgaa 3418611  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||||||||| ||  ||| |||||| ||||||||||||||    
T  3418612 cccgatattccccagatacgtccttggaaggagctccttg 3418651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 395 - 534
Target Start/End: Complemental strand, 10927717 - 10927578
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||||||| |||||||||| |||| |||| || |||||||||| |||||  | ||||||||||||||||||| ||| |||| ||   ||  |||||||||    
T  10927717 ctttcgcatcggtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctaggaatcgaa 10927618  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||| ||||| |||  || ||||||  ||| |||||||||    
T  10927617 cccggtattccccgggtacgtccttgaaagaagctccttg 10927578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 395 - 534
Target Start/End: Complemental strand, 14846686 - 14846548
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||| ||||||| ||||||||| ||||||||| ||||| |||  | ||||||||||||||||||  ||| | ||  || ||| | ||||||||    
T  14846686 ctttcgcaccgatttccgacccaccaaaggtggacgacttatctgactcatgcgtagaggcatgcgcactgaccaatcatt-gttcccctgagaatcgaa 14846588  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||| ||||| |||  || |||||| ||||||||| ||||    
T  14846587 cccggtattccccgggtacgtccttagaaggagcttcttg 14846548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 395 - 534
Target Start/End: Complemental strand, 16894046 - 16893909
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||||||| ||||||||| ||| |||| |||| |||||  | ||| ||||||| | ||||| ||| |||||||  ||| | ||||||||    
T  16894046 ctttcgcaccggtttccga-ccaccaaaggtgggcgac-aatccggctcatgcgtaaaggcatgtgtactggccaagcgttattccccctgtgaatcgaa 16893949  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||||||||| ||| ||| ||| || ||||||| ||||||    
T  16893948 cccgatattccccggatacgtcattggaaggagttccttg 16893909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 395 - 534
Target Start/End: Complemental strand, 17981552 - 17981413
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||||||||||||||||||  |||||||| ||| | ||||||  | |||| | |||||||||||| ||||||||||  ||| ||  ||| ||||||||||    
T  17981552 ctttcgcaccggtttccgactcaccaaagctgggcaactaattcgactcgtgcgtagaggcatgcacactggtcaagagttgttccccctgggaatcgaa 17981453  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||| ||||  |||  ||  ||||| ||||||||||||||    
T  17981452 cccggtatttcccgggtacatccttggaaggagctccttg 17981413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 395 - 464
Target Start/End: Original strand, 39969914 - 39969983
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcact 464  Q
    |||||||| |||||||||||||| ||| ||||| ||||||||||| |||  | |||||||||||||||||    
T  39969914 ctttcgcatcggtttccgatccatcaatgatgggcgactaatctgactcatgtgtagaggcatgcgcact 39969983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 395 - 504
Target Start/End: Complemental strand, 45521279 - 45521171
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||||||| ||| ||||| ||  ||||||||| |||||  | |||||||||||||||||| ||||  |||  || ||| ||||||||||    
T  45521279 ctttcgcaccggtttccgacccatcaaaggtgagcgactaatccggctcatgcgtagaggcatgcgcactgatcaagtgtt-gttcccctgggaatcgaa 45521181  T
Q  495 cccgatattc 504  Q
    |||| |||||    
T  45521180 cccggtattc 45521171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 396 - 534
Target Start/End: Original strand, 7673657 - 7673792
Alignment:
Q  396 tttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaac 495  Q
    |||||||||||||| |||||||| |||||||| |||  |||| |||||| | |||||||||||| |||| | |||||||| ||   |||   ||||||||    
T  7673657 tttcgcaccggttttcgatccactaaagatgggcgaaaaatccggctcgtgcgtagaggcatgcacactagccaaacgttgtt---ccccctaatcgaac 7673753  T
Q  496 ccgatattctccgaataagtccttcgaaggagctccttg 534  Q
      ||||||| ||  ||| |||||| ||||||||||||||    
T  7673754 ttgatattccccagatacgtccttggaaggagctccttg 7673792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 396 - 532
Target Start/End: Complemental strand, 13085633 - 13085498
Alignment:
Q  396 tttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaac 495  Q
    |||||||||||||||||| ||||    ||||| ||| |||||||||||| | ||||||| |||| ||||||  ||||||| ||  | | | |||||||||    
T  13085633 tttcgcaccggtttccgacccacttt-gatgggcgattaatctggctcgtgcgtagaggtatgcacactggctaaacgttgttccctctgagaatcgaac 13085535  T
Q  496 ccgatattctccgaataagtccttcgaaggagctcct 532  Q
    ||| ||||| ||| ||| |||||| ||||||||||||    
T  13085534 ccggtattccccggatacgtccttggaaggagctcct 13085498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 400 - 475
Target Start/End: Complemental strand, 11786021 - 11785946
Alignment:
Q  400 gcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgtt 475  Q
    |||||||||||||||||| ||||||||  ||| |||||||||||  | |||||||||||| |||||  ||||||||    
T  11786021 gcaccggtttccgatccatcaaagatgagcgattaatctggctcatgcgtagaggcatgcacactgcccaaacgtt 11785946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 425 - 504
Target Start/End: Complemental strand, 20240651 - 20240572
Alignment:
Q  425 tggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattc 504  Q
    ||||||| | ||||| |||| | ||||||||||||||||||  ||||||||||||| || || |||||||| ||||||||    
T  20240651 tggacgatttatctgactcgtgcgtagaggcatgcgcactgaccaaacgttatttttcctggaaatcgaactcgatattc 20240572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 425 - 504
Target Start/End: Original strand, 20252416 - 20252495
Alignment:
Q  425 tggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattc 504  Q
    ||||||| | ||||| |||| | ||||||||||||||||||  ||||||||||||| || || |||||||| ||||||||    
T  20252416 tggacgatttatctgactcgtgcgtagaggcatgcgcactgaccaaacgttatttttcctggaaatcgaactcgatattc 20252495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 395 - 533
Target Start/End: Complemental strand, 8817144 - 8817006
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||||||||||||||||||  || ||||||| ||| | ||||| | |||| | |||||||||| |  ||  |||||  ||| ||| |   ||||||||||    
T  8817144 ctttcgcaccggtttccgactcatcaaagatagacaagtaatccgactcgtgcgtagaggcatacataccagtcaagtgttgtttcctatgggaatcgaa 8817045  T
Q  495 cccgatattctccgaataagtccttcgaaggagctcctt 533  Q
    ||||||||||| |||||| ||||||  ||||||||||||    
T  8817044 cccgatattcttcgaatacgtccttaaaaggagctcctt 8817006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 485 - 534
Target Start/End: Complemental strand, 22810101 - 22810052
Alignment:
Q  485 gggaatcgaacccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||||||||||||||| ||||||| ||| |||||| ||||||||||||||    
T  22810101 gggaatcgaacccgatgttctccggatacgtccttggaaggagctccttg 22810052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 459
Target Start/End: Complemental strand, 2964187 - 2964123
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgc 459  Q
    |||||||||||||||| || ||||||||| ||| ||||||||| || ||| | ||||||||||||    
T  2964187 ctttcgcaccggtttctgacccaccaaaggtgggcgactaatccggttcgtgcgtagaggcatgc 2964123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 468
Target Start/End: Complemental strand, 12754127 - 12754063
Alignment:
Q  404 cggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtc 468  Q
    |||||||||||||| ||||||||  ||||||||||| || | |  ||||||||||||||||||||    
T  12754127 cggtttccgatccatcaaagatgagcgactaatctgacttgtgcatagaggcatgcgcactggtc 12754063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 471
Target Start/End: Original strand, 22212514 - 22212590
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaa 471  Q
    ||||||||||||||| ||| ||||||||| ||  ||||||||| ||| || | ||||| ||||||| ||||||||||    
T  22212514 ctttcgcaccggttttcgaaccaccaaaggtgagcgactaatccggcccgtgcgtagaagcatgcgtactggtcaaa 22212590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 438 - 534
Target Start/End: Original strand, 38922456 - 38922552
Alignment:
Q  438 tggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    ||||||| | ||| ||||||||||||||| ||| |||| ||  | | |||||||||||||| ||||| |||  || |||||| ||||||||||||||    
T  38922456 tggctcgtgcgtaaaggcatgcgcactggccaagcgttgttccctctgggaatcgaacccggtattccccgggtacgtccttggaaggagctccttg 38922552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 466
Target Start/End: Original strand, 11298266 - 11298337
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactgg 466  Q
    ||||||||||||||||||| ||||||||| ||  ||| |||| ||||||  |  ||||||||||||||||||    
T  11298266 ctttcgcaccggtttccgacccaccaaaggtgagcgattaatttggctcatgcatagaggcatgcgcactgg 11298337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 400 - 475
Target Start/End: Original strand, 13357960 - 13358035
Alignment:
Q  400 gcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgtt 475  Q
    |||||||||||||| |||| ||||  |||||||||||| |||||| |  ||||||||||| || ||| ||||||||    
T  13357960 gcaccggtttccgacccactaaagggggacgactaatccggctcgtgcatagaggcatgcacattggccaaacgtt 13358035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 534
Target Start/End: Original strand, 33401799 - 33401937
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||||||| ||||||  ||||||| |||| ||| ||||||||| | |||  | |||||||||||| ||||||||||  ||| ||  ||| |  |||||||    
T  33401799 ctttcgcatcggtttt-gatccactaaaggtgggcgactaatccgactcatgcgtagaggcatgcacactggtcaagtgttgttccccctgaaaatcgaa 33401897  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||| ||||| |||| || ||||||  |||||||||||||    
T  33401898 cccggtattccccgagtacgtccttgaaaggagctccttg 33401937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 404 - 534
Target Start/End: Original strand, 1012985 - 1013115
Alignment:
Q  404 cggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatatt 503  Q
    |||||| |||||||| |||| || |||| ||||  |||||  | ||||||||||| | ||||| ||| |||| ||  ||| |||||||||||||| ||||    
T  1012985 cggttttcgatccactaaaggtgaacgattaattcggctcatgcgtagaggcatgtgtactggccaagcgttgttccccctgggaatcgaacccggtatt 1013084  T
Q  504 ctccgaataagtccttcgaaggagctccttg 534  Q
    | ||| ||| |||||| |||  |||||||||    
T  1013085 ccccggatacgtccttggaaaaagctccttg 1013115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 395 - 437
Target Start/End: Original strand, 1653859 - 1653901
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatc 437  Q
    ||||||||||||||||||| |||||||  ||||||||||||||    
T  1653859 ctttcgcaccggtttccgacccaccaataatggacgactaatc 1653901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 395 - 437
Target Start/End: Original strand, 1742235 - 1742277
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatc 437  Q
    ||||||||||||||||||| |||||||  ||||||||||||||    
T  1742235 ctttcgcaccggtttccgacccaccaataatggacgactaatc 1742277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 399 - 437
Target Start/End: Original strand, 4772054 - 4772092
Alignment:
Q  399 cgcaccggtttccgatccaccaaagatggacgactaatc 437  Q
    ||||||||||||||| ||||||||| |||||||||||||    
T  4772054 cgcaccggtttccgacccaccaaaggtggacgactaatc 4772092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 448 - 534
Target Start/End: Complemental strand, 29933830 - 29933745
Alignment:
Q  448 gtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||||||||||  ||||||||||  ||| || |||| |||||||||||||| ||||||||| |||  | ||| ||||||||||||||    
T  29933830 gtagaggcatgtacactggtcaagtgttgttctccctgggaatcgaacccg-tattctccggatacattcttagaaggagctccttg 29933745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 470
Target Start/End: Complemental strand, 3568005 - 3567940
Alignment:
Q  405 ggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaa 470  Q
    ||||||||| ||||||||| |||| ||||||| ||||||  | ||||||| ||| |||||||||||    
T  3568005 ggtttccgacccaccaaaggtggatgactaatttggctcatgcgtagaggtatgtgcactggtcaa 3567940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 524
Target Start/End: Original strand, 34710566 - 34710695
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||||| || ||||| ||| ||||||| |||||||||||| || | || | | ||| ||||||||||||| | |||  ||| ||| ||| ||||||||||    
T  34710566 ctttcggactggttttcgacccaccaatgatggacgactagtccgacttgtgtgtaaaggcatgcgcactagccaagtgttgtttcccctgggaatcgaa 34710665  T
Q  495 cccgatattctccgaataagtccttcgaag 524  Q
     ||| |||| ||||| || |||||| ||||    
T  34710666 tccggtattttccgagtacgtccttggaag 34710695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 448 - 480
Target Start/End: Complemental strand, 18091458 - 18091426
Alignment:
Q  448 gtagaggcatgcgcactggtcaaacgttatttt 480  Q
    |||||||||||||||||||||||||||| ||||    
T  18091458 gtagaggcatgcgcactggtcaaacgttgtttt 18091426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 395 - 475
Target Start/End: Complemental strand, 23895679 - 23895599
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgtt 475  Q
    |||||||||| |||||||| ||| ||||| ||||||| |||||   |||| | ||||||| ||||||||||| ||| ||||    
T  23895679 ctttcgcacccgtttccgacccatcaaaggtggacgattaatccatctcgtgcgtagaggtatgcgcactggccaagcgtt 23895599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 402 - 462
Target Start/End: Original strand, 24938568 - 24938628
Alignment:
Q  402 accggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgca 462  Q
    |||||||||||||||| ||||| |||| |||||||| || ||  | |||||||||||||||    
T  24938568 accggtttccgatccatcaaaggtggatgactaatccggttcatgcgtagaggcatgcgca 24938628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 6e-23; HSPs: 69)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 395 - 534
Target Start/End: Complemental strand, 48342127 - 48341988
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| ||  | ||||||||||||||||| | ||| |||| ||  |||  ||||| |||    
T  48342127 ctttcgcacctgtttccgatccaccaaagatggacgactaatctggttcatgcgtagaggcatgcgcactagccaagcgttgttccccctaggaatagaa 48342028  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||| ||||| ||   || |||||| ||||||||||||||    
T  48342027 cccggtattccccaggtacgtccttggaaggagctccttg 48341988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 396 - 532
Target Start/End: Complemental strand, 53649833 - 53649697
Alignment:
Q  396 tttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaac 495  Q
    |||||||||||||||||||||| ||||| || |||||||||| |||||  | |||||| || ||||||||| |||  ||| ||  ||| | |||||||||    
T  53649833 tttcgcaccggtttccgatccatcaaaggtgaacgactaatccggctcatgcgtagagacaggcgcactggccaagtgttgttcaccctgagaatcgaac 53649734  T
Q  496 ccgatattctccgaataagtccttcgaaggagctcct 532  Q
    ||| ||||| ||||||| |||||| ||||||||||||    
T  53649733 ccggtattccccgaatacgtccttggaaggagctcct 53649697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 399 - 534
Target Start/End: Complemental strand, 10040659 - 10040525
Alignment:
Q  399 cgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccg 498  Q
    ||||||||||||| | ||||||||| |||||||| | || |||||| | ||||||||||||||||||| ||| ||||  || ||| | ||||||||||||    
T  10040659 cgcaccggtttccaacccaccaaaggtggacgaccattccggctcgtgcgtagaggcatgcgcactggccaagcgtt-gttcccctgagaatcgaacccg 10040561  T
Q  499 atattctccgaataagtccttcgaaggagctccttg 534  Q
    |||||| |||  || |||||| ||||||||||||||    
T  10040560 atattccccgggtacgtccttagaaggagctccttg 10040525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 395 - 534
Target Start/End: Complemental strand, 13894033 - 13893894
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||| ||||||||||||| ||| ||||||||| |||||| | ||||||||||||||| ||  ||| |||| ||  ||| || |||| ||    
T  13894033 ctttcgcaccggttttcgatccaccaaaggtgggcgactaatccggctcgtgtgtagaggcatgcgcattgaccaagcgttgttccccctggaaatccaa 13893934  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||| ||||| ||| | | |||||| ||||||||||||||    
T  13893933 cccggtattccccggacacgtccttggaaggagctccttg 13893894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 395 - 534
Target Start/End: Complemental strand, 25295067 - 25294928
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||||| | ||||||| | ||||||||||||| |||||  |  |||||||||||||||||| |||  ||| ||| ||| | ||||| ||    
T  25295067 ctttcgcaccggtttccaacccaccaatggtggacgactaatccggctcatgcatagaggcatgcgcactggccaagtgttgtttccccagagaatcaaa 25294968  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||| ||||| ||| ||| |||||| ||||||||||||||    
T  25294967 cccggtattccccggatacgtccttggaaggagctccttg 25294928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 395 - 534
Target Start/End: Complemental strand, 29128026 - 29127887
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||||||| |||||||||| ||||||||| ||| ||||||||| |||||  | ||||||||||||||||||  |||  ||| || |||| || |||||||    
T  29128026 ctttcgcatcggtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgcgcactgaccaagtgttgttctccctggaaatcgaa 29127927  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||||||||| ||  ||| |||||| |||||| |||||||    
T  29127926 cccgatattccccagatacgtccttggaaggatctccttg 29127887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 395 - 534
Target Start/End: Original strand, 29762155 - 29762294
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||||||| ||||||| | |||||||||||||  ||||  |  |||||||||||||||||| |||  ||| ||  ||| | |||||| |    
T  29762155 ctttcgcaccggtttccgacccaccaatggtggacgactaatccagctcatgcatagaggcatgcgcactggccaagtgttgttgcccctgagaatcgga 29762254  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||||||||| |||||||  ||||| ||||||||||||||    
T  29762255 cccgatattccccgaatacatccttggaaggagctccttg 29762294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 395 - 530
Target Start/End: Complemental strand, 35316063 - 35315928
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||||||| |||||||||| ||||||||  ||| |||||||||  ||||  | ||||||||||||||||||| |||  ||| ||  ||| ||||||||||    
T  35316063 ctttcgcatcggtttccgacccaccaaaagtgggcgactaatccagctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaa 35315964  T
Q  495 cccgatattctccgaataagtccttcgaaggagctc 530  Q
    ||||||||||||||  || |||||| ||||||||||    
T  35315963 cccgatattctccgggtacgtccttggaaggagctc 35315928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 395 - 530
Target Start/End: Complemental strand, 47219251 - 47219116
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||||||| ||| ||||| ||||||||||||| |||||  | ||||||||||||||||| | ||| |||| ||| ||  ||||||||||    
T  47219251 ctttcgcaccggtttccgacccatcaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactagccaagcgttgtttcccttgggaatcgaa 47219152  T
Q  495 cccgatattctccgaataagtccttcgaaggagctc 530  Q
    || | ||||| ||| ||| |||||| ||| ||||||    
T  47219151 cctggtattccccggatacgtccttggaaagagctc 47219116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 396 - 534
Target Start/End: Complemental strand, 6462518 - 6462380
Alignment:
Q  396 tttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaac 495  Q
    |||||||||||||||| | |||| ||  |||| ||||||||| |||||  | ||||||||||||||||||| ||| |||| || |||| | |||||||||    
T  6462518 tttcgcaccggtttccaacccactaataatggtcgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttctccctgtgaatcgaac 6462419  T
Q  496 ccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    ||| ||||| ||  ||| |||||| ||||||||||||||    
T  6462418 ccggtattccccagatacgtccttggaaggagctccttg 6462380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 395 - 497
Target Start/End: Original strand, 28572211 - 28572313
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||||||| ||||||||| ||| ||||||||| |||||| | ||||||||||||  ||||| ||| |||| ||| ||| ||||||||||    
T  28572211 ctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcatactggccaagcgttgtttcccctgggaatcgaa 28572310  T
Q  495 ccc 497  Q
    |||    
T  28572311 ccc 28572313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 397 - 509
Target Start/End: Complemental strand, 8362682 - 8362570
Alignment:
Q  397 ttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacc 496  Q
    |||||||||||||| ||||||| |||| |||||||||||| ||||||  | ||||||||||||| ||||| |||||||| ||| | | |||||| |||||    
T  8362682 ttcgcaccggtttcggatccactaaaggtggacgactaatttggctcatgcgtagaggcatgcggactggccaaacgttgtttccactgggaattgaacc 8362583  T
Q  497 cgatattctccga 509  Q
    || ||||| ||||    
T  8362582 cggtattccccga 8362570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 396 - 532
Target Start/End: Original strand, 51682955 - 51683091
Alignment:
Q  396 tttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaac 495  Q
    |||||||| ||||||||| ||||||  | ||| ||||||||| |||||| | | ||||||||||||||||||||| |||| ||  ||| |||||||||||    
T  51682955 tttcgcactggtttccgacccaccattggtgggcgactaatccggctcgtgtggagaggcatgcgcactggtcaagcgttgttccccctgggaatcgaac 51683054  T
Q  496 ccgatattctccgaataagtccttcgaaggagctcct 532  Q
    | | ||||| ||| ||| ||| || ||||||||||||    
T  51683055 ctggtattccccggatacgtctttggaaggagctcct 51683091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 395 - 530
Target Start/End: Complemental strand, 33251769 - 33251634
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||||||||  |||| ||| ||| ||||  ||||||||||||| |||||  | |||||||||||| |||||| |||||||| ||  | ||||||||||||    
T  33251769 ctttcgcactcgttttcgacccatcaaatgtggacgactaatccggctcatgcgtagaggcatgcacactggccaaacgttgttcccaccgggaatcgaa 33251670  T
Q  495 cccgatattctccgaataagtccttcgaaggagctc 530  Q
    |||| ||||| || |||| |||||| ||||||||||    
T  33251669 cccggtattcccctaatacgtccttggaaggagctc 33251634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 395 - 534
Target Start/End: Complemental strand, 45877561 - 45877422
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||||||| ||| ||| | || |||||||||| |||||  | ||||||||||| ||||||| |||  ||| ||| ||| || |||||||    
T  45877561 ctttcgcaccggtttccgacccatcaatggtgaacgactaatccggctcatgcgtagaggcatgtgcactggccaagtgttgtttcccctggaaatcgaa 45877462  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||| ||||| ||| ||| |||||| ||||| ||||||||    
T  45877461 cccggtattccccggatacgtccttggaaggggctccttg 45877422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 395 - 534
Target Start/End: Complemental strand, 54261333 - 54261194
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||||||| |||| |||| || |||||||||| |||||  | ||||||||||||||||||| ||| |||| ||   ||  |||||||||    
T  54261333 ctttcgcaccggtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctaggaatcgaa 54261234  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||| ||||| ||   || |||||| ||||||||||||||    
T  54261233 cccggtattccccaggtacgtccttggaaggagctccttg 54261194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 400 - 497
Target Start/End: Original strand, 50405608 - 50405705
Alignment:
Q  400 gcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaaccc 497  Q
    |||||||||||||| ||||||| | ||| ||||||||| | |||| | ||||||||||||||||||||||| |||| ||| |||  ||||||||||||    
T  50405608 gcaccggtttccgacccaccaatggtgggcgactaatccgactcgtgcgtagaggcatgcgcactggtcaagcgttgtttcccctcggaatcgaaccc 50405705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 404 - 536
Target Start/End: Complemental strand, 49198449 - 49198317
Alignment:
Q  404 cggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatatt 503  Q
    ||||||| |||||||||| | ||||||||||||| |||||  | ||||||||||||||||||| |||  ||| ||  |||  ||||||||||||| ||||    
T  49198449 cggtttctgatccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctaggaatcgaacccggtatt 49198350  T
Q  504 ctccgaataagtccttcgaaggagctccttgtc 536  Q
    | ||| ||| |||||| |||| | |||||||||    
T  49198349 ccccggatatgtccttggaagaaactccttgtc 49198317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 395 - 534
Target Start/End: Complemental strand, 15320293 - 15320154
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||||||||||||||| || ||||||||| ||| ||||||||| |||||| | |||||||||||| |||||| ||| | || ||   ||  | |||||||    
T  15320293 ctttcgcaccggtttctgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcacactggccaatcattgttcctcctcgaaatcgaa 15320194  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||| ||||| |||  || |||||| ||||||||||||||    
T  15320193 cccggtattccccgggtacgtccttggaaggagctccttg 15320154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 395 - 534
Target Start/End: Complemental strand, 29136020 - 29135881
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||||| |||||||||| | ||||||| | |||| |||||||| |||||  | ||||||||||||||||||| |||  ||| ||  ||| ||||||||||    
T  29136020 ctttcgtaccggtttccaacccaccaatggtggaagactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaa 29135921  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
     ||| ||||| ||| ||| |||||| |||| |||||||||    
T  29135920 tccggtattccccggatacgtccttggaagaagctccttg 29135881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 395 - 534
Target Start/End: Complemental strand, 31072985 - 31072846
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||||| | | ||||||| ||||||| |||||||| ||| | ||||||||||| ||||||  ||| |||| ||  ||| || |||||||    
T  31072985 ctttcgcaccggtttccaacctaccaaaggtggacgattaatctgggtcgtgcgtagaggcatgtgcactgaccaagcgttgttccccctggaaatcgaa 31072886  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    || | |||||||||  || ||||||  |||||||||||||    
T  31072885 cctggtattctccgggtacgtccttgaaaggagctccttg 31072846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 395 - 466
Target Start/End: Original strand, 49021203 - 49021274
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactgg 466  Q
    ||||||||||||||||||| ||||||| | ||||||||||||| |||||  | |||||||||||||||||||    
T  49021203 ctttcgcaccggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactgg 49021274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 395 - 534
Target Start/End: Complemental strand, 49543626 - 49543487
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||||| ||| |||||||| |||| |||| ||| ||||||||  |||||| | |||||||||||| |||||  |||||||| ||  ||  | ||||||||    
T  49543626 ctttcgtaccagtttccgacccactaaaggtgggcgactaattcggctcgtgcgtagaggcatgcacactgaccaaacgttgttccccatgagaatcgaa 49543527  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||||||||| | | ||| |||||| ||||||||||||||    
T  49543526 cccgatattcccgggatacgtccttggaaggagctccttg 49543487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 396 - 466
Target Start/End: Original strand, 3507534 - 3507604
Alignment:
Q  396 tttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactgg 466  Q
    |||||||||||||||||| ||||||||| ||  ||||||||| |||||| | |||||||||||||||||||    
T  3507534 tttcgcaccggtttccgacccaccaaaggtgagcgactaatccggctcgtgcgtagaggcatgcgcactgg 3507604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 395 - 529
Target Start/End: Original strand, 51060281 - 51060415
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||||||| ||||||| | |||||||||||||  | ||  | ||||||||||||||||||  |||  ||| ||  ||| | ||||||||    
T  51060281 ctttcgcaccggtttccgacccaccaatggtggacgactaatccagttcatgcgtagaggcatgcgcactgaccaagtgttgttccccctgagaatcgaa 51060380  T
Q  495 cccgatattctccgaataagtccttcgaaggagct 529  Q
    |||||||||| ||| |||  ||||| |||||||||    
T  51060381 cccgatattccccggatagatccttggaaggagct 51060415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 395 - 504
Target Start/End: Complemental strand, 23511674 - 23511565
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||| ||| ||| ||||| ||||||| ||||| | |||  | ||||||||||||||||||||||||||||  |  ||  | ||||||||    
T  23511674 ctttcgcaccggttttcgacccatcaaaggtggacgattaatccgactcatgcgtagaggcatgcgcactggtcaaacgttgctccccttgtgaatcgaa 23511575  T
Q  495 cccgatattc 504  Q
    ||||||||||    
T  23511574 cccgatattc 23511565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 395 - 504
Target Start/End: Original strand, 30767247 - 30767356
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||||||||  |||||||| ||||||||| ||| ||||||||| |||||| | |||||||||||| |||||| |||  ||| ||  ||| || |||||||    
T  30767247 ctttcgcactagtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcacactggccaagtgttgttccccctggaaatcgaa 30767346  T
Q  495 cccgatattc 504  Q
    ||||||||||    
T  30767347 cccgatattc 30767356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 395 - 536
Target Start/End: Original strand, 41630512 - 41630653
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||| |||| |||||||| | ||||||| ||| ||||||||| |||||  | ||||||||||||||||||| ||| |||| ||  ||  |||||| |||    
T  41630512 ctttcacaccagtttccgaccaaccaaaggtgggcgactaatccggctcatgtgtagaggcatgcgcactgggcaagcgttgttccccttgggaattgaa 41630611  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttgtc 536  Q
    |||| |||| ||||  || |||| | ||||||||||||||||    
T  41630612 cccggtattttccggttacgtccatggaaggagctccttgtc 41630653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 429 - 534
Target Start/End: Original strand, 42412808 - 42412913
Alignment:
Q  429 cgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattctccgaataagtccttcgaaggagc 528  Q
    ||||||||| |||||  | ||||||||||| ||||| | ||| |||| ||  |||||||||||||||||| ||||| ||| ||| |||||| ||||||||    
T  42412808 cgactaatccggctcatgcgtagaggcatgggcacttgccaagcgttgttccccccgggaatcgaacccggtattccccggatacgtccttggaaggagc 42412907  T
Q  529 tccttg 534  Q
    ||||||    
T  42412908 tccttg 42412913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 395 - 475
Target Start/End: Original strand, 15084945 - 15085025
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgtt 475  Q
    ||||| ||||||||||||||||||||||||| |||||||||||| |||||   ||||||| |||| |||||| ||| ||||    
T  15084945 ctttcacaccggtttccgatccaccaaagatagacgactaatctagctcgtacgtagaggtatgcacactggccaaccgtt 15085025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 398 - 534
Target Start/End: Original strand, 26207804 - 26207940
Alignment:
Q  398 tcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaaccc 497  Q
    |||||||||||||||| |||| ||  |||| ||||||||| |||||  | |||||||||||| |||||| ||| |||| ||  ||  |||||||||||||    
T  26207804 tcgcaccggtttccgacccactaataatggccgactaatccggctcatgcgtagaggcatgcacactggacaagcgttgttccccgtgggaatcgaaccc 26207903  T
Q  498 gatattctccgaataagtccttcgaaggagctccttg 534  Q
    | ||||| |||  ||  ||||| ||||||||||||||    
T  26207904 ggtattccccgggtacatccttggaaggagctccttg 26207940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 395 - 534
Target Start/End: Complemental strand, 7328950 - 7328812
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||| ||| ||||||||| ||| ||||||||| |||||  | ||| ||||||||||||||| |||  ||| ||  ||| ||||||||||    
T  7328950 ctttcgcaccggttttcgacccaccaaaggtgggcgactaatccggctcatgcgta-aggcatgcgcactggccaagtgttgttccccctgggaatcgaa 7328852  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||| ||||  |||  || |||||| |||||| |||||||    
T  7328851 cccggtatttcccgggtacgtccttggaaggaactccttg 7328812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 400 - 475
Target Start/End: Original strand, 35923628 - 35923703
Alignment:
Q  400 gcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgtt 475  Q
    |||||||||| ||||||| ||||||||||||||||||  | |||| |  |||||||||||||||||| ||||||||    
T  35923628 gcaccggttttcgatccatcaaagatggacgactaattcgactcgtgcttagaggcatgcgcactggccaaacgtt 35923703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 395 - 470
Target Start/End: Original strand, 43330732 - 43330807
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaa 470  Q
    |||||| ||||||||  || ||||||||| ||| ||||||||| |||||| | |||||||||||||||||||||||    
T  43330732 ctttcgtaccggtttttgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggtcaa 43330807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 395 - 465
Target Start/End: Original strand, 3136694 - 3136764
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactg 465  Q
    ||||||||||||||||||| | ||||||| ||||||||||||| | |||  | ||||||||||||||||||    
T  3136694 ctttcgcaccggtttccgaccaaccaaaggtggacgactaatccgactcatgcgtagaggcatgcgcactg 3136764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 395 - 505
Target Start/End: Original strand, 26590266 - 26590376
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||||||||||||||||||||||||||| | |  ||| |||||| ||||| | |||||||||||| |||||  ||| |||| ||  ||| | ||||||||    
T  26590266 ctttcgcaccggtttccgatccaccaaatacgatcgattaatctagctcgtgtgtagaggcatgcacactgaccaagcgttgttccccctgagaatcgaa 26590365  T
Q  495 cccgatattct 505  Q
    ||| |||||||    
T  26590366 cccaatattct 26590376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 395 - 504
Target Start/End: Original strand, 7310703 - 7310812
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||||||| |||||||||| ||||||||||||  ||||||||| |||||| | |||||||||||| ||| || |||  ||| ||  | | ||||||||||    
T  7310703 ctttcgcatcggtttccgacccaccaaagatgagcgactaatccggctcgtgcgtagaggcatgcacaccgggcaagtgttgttcccactgggaatcgaa 7310802  T
Q  495 cccgatattc 504  Q
    |||| |||||    
T  7310803 cccggtattc 7310812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 395 - 456
Target Start/End: Complemental strand, 47164213 - 47164152
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggca 456  Q
    ||||| ||||||||||||||||||||||||||  ||||||||| |||||| | |||||||||    
T  47164213 ctttcacaccggtttccgatccaccaaagatgagcgactaatccggctcgtgcgtagaggca 47164152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 395 - 475
Target Start/End: Original strand, 55069679 - 55069759
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgtt 475  Q
    |||| |||||||||||||| ||||||||| ||  ||| ||||| |||||| | ||||||||||| ||||||| ||||||||    
T  55069679 cttttgcaccggtttccgacccaccaaaggtgagcgattaatccggctcgtgcgtagaggcatgtgcactggccaaacgtt 55069759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 395 - 470
Target Start/End: Complemental strand, 928707 - 928632
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaa 470  Q
    ||||||||||| ||| |||  |||||||| |||| |||||||| |||||| | |||| ||||||||||||||||||    
T  928707 ctttcgcaccgattttcgactcaccaaaggtggatgactaatccggctcgtgcgtagcggcatgcgcactggtcaa 928632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 397 - 496
Target Start/End: Complemental strand, 4638259 - 4638160
Alignment:
Q  397 ttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacc 496  Q
    |||||| |||||||||| |||  |||| ||| | ||||||| |||||| | ||||||| ||||||||||||||| |||| |||  || ||||||||||||    
T  4638259 ttcgcatcggtttccgacccattaaaggtgggctactaatccggctcgtgcgtagaggtatgcgcactggtcaagcgttgtttctcctgggaatcgaacc 4638160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 395 - 498
Target Start/End: Complemental strand, 26043919 - 26043816
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||| |||||||| ||  |||||||| ||  ||||||||| |||||  | ||||||||||||||||||| |||  ||| || |||| ||||||||||    
T  26043919 ctttcgccccggtttctgactcaccaaaggtgagcgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttctccctgggaatcgaa 26043820  T
Q  495 cccg 498  Q
    ||||    
T  26043819 cccg 26043816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 395 - 470
Target Start/End: Original strand, 45450447 - 45450522
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaa 470  Q
    ||||||||||||||||| |  || ||||| |||||||||||||| |||   | |||||||||||||||||||||||    
T  45450447 ctttcgcaccggtttccaactcatcaaaggtggacgactaatctagcttatgcgtagaggcatgcgcactggtcaa 45450522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 395 - 466
Target Start/End: Original strand, 47749105 - 47749176
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactgg 466  Q
    |||||||| |||||||||| | ||||||| ||| ||||||||  |||||| | |||||||||||||||||||    
T  47749105 ctttcgcatcggtttccgacctaccaaaggtgggcgactaattcggctcgtgcgtagaggcatgcgcactgg 47749176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 395 - 437
Target Start/End: Complemental strand, 19147068 - 19147026
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatc 437  Q
    ||||||||||||||||||| ||||||||| |||||||||||||    
T  19147068 ctttcgcaccggtttccgacccaccaaaggtggacgactaatc 19147026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 395 - 536
Target Start/End: Original strand, 26361967 - 26362106
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||| ||||||||||||| ||| ||||| ||  ||||||||| |||||| | |||||||||||| |||||  |||||||| ||  ||  ||||||| ||    
T  26361967 ctttcacaccggtttccgacccatcaaaggtgtgcgactaatccggctcgtgcgtagaggcatgcacactgaccaaacgttgttccccttgggaatcaaa 26362066  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttgtc 536  Q
    || |||||||  |||  | |||||| |||||||||| |||||    
T  26362067 cctgatattcctcga--acgtccttggaaggagctcattgtc 26362106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 395 - 504
Target Start/End: Complemental strand, 7650334 - 7650225
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||||| | ||||||||| ||| ||||||||| |||||| | |||||| ||| || ||||| |||  ||| ||  ||| || |||||||    
T  7650334 ctttcgcaccggtttccaacccaccaaaggtgggcgactaatccggctcgtgcgtagagacattcgtactggccaagtgttgttccccctggaaatcgaa 7650235  T
Q  495 cccgatattc 504  Q
    |||| |||||    
T  7650234 cccggtattc 7650225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 395 - 504
Target Start/End: Original strand, 26923261 - 26923370
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||||||||||||||| || |||||||  |||||| | ||||| | |||| | ||| | |||||||||||| ||||||||| |||||||    |||||||    
T  26923261 ctttcgcaccggtttctgacccaccaataatggacaattaatccgactcgtgtgtatatgcatgcgcactgatcaaacgttgttttccctaaaaatcgaa 26923360  T
Q  495 cccgatattc 504  Q
     |||||||||    
T  26923361 tccgatattc 26923370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 395 - 504
Target Start/End: Complemental strand, 30045928 - 30045819
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||||||||  |||| ||| ||| ||||| ||||||||||||| | |||| | |||||| |||||||||||| ||| |||| ||  |||  |||||||||    
T  30045928 ctttcgcactagtttacgacccatcaaaggtggacgactaatcagactcgtgcgtagagacatgcgcactggccaagcgttgttccccctaggaatcgaa 30045829  T
Q  495 cccgatattc 504  Q
    |||| |||||    
T  30045828 cccggtattc 30045819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 417 - 534
Target Start/End: Original strand, 32873571 - 32873687
Alignment:
Q  417 accaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattctccgaataagtc 516  Q
    ||||||| ||| |||||||||||||||    ||||||||||| ||||||||||| |||| || ||||  ||||||||||| | ||||| |||  || |||    
T  32873571 accaaaggtgggcgactaatctggctcatacgtagaggcatgtgcactggtcaagcgttgttctccctaggaatcgaacctggtattc-ccgggtacgtc 32873669  T
Q  517 cttcgaaggagctccttg 534  Q
    ||| ||| ||||||||||    
T  32873670 cttggaatgagctccttg 32873687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 395 - 444
Target Start/End: Original strand, 36043674 - 36043723
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcg 444  Q
    ||||||||||||||||||| ||||||||| ||| ||||||||| ||||||    
T  36043674 ctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcg 36043723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 395 - 464
Target Start/End: Complemental strand, 47471938 - 47471869
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcact 464  Q
    |||||||| |||||||||| ||||||||| ||||||||||||  |||||  | ||||| |||||||||||    
T  47471938 ctttcgcatcggtttccgacccaccaaaggtggacgactaattcggctcatgcgtagaagcatgcgcact 47471869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 430 - 531
Target Start/End: Complemental strand, 49082896 - 49082795
Alignment:
Q  430 gactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattctccgaataagtccttcgaaggagct 529  Q
    ||||||||||  ||| | ||||| |||||||||||||  || |||| || |||| ||||||||||| || ||||| ||| ||| |||||| |||||||||    
T  49082896 gactaatctgattcgtgtgtagatgcatgcgcactggctaagcgttgttctccctgggaatcgaactcggtattccccggatacgtccttagaaggagct 49082797  T
Q  530 cc 531  Q
    ||    
T  49082796 cc 49082795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 419 - 475
Target Start/End: Complemental strand, 7648823 - 7648767
Alignment:
Q  419 caaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgtt 475  Q
    ||||| ||| ||||||||| |||||| | ||||||| ||||||||||||||||||||    
T  7648823 caaaggtgggcgactaatccggctcgtgcgtagaggtatgcgcactggtcaaacgtt 7648767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 407 - 475
Target Start/End: Complemental strand, 8164648 - 8164580
Alignment:
Q  407 tttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgtt 475  Q
    ||||||||||||||||| ||| ||||||||| | |||| | ||| ||||||||||||||| ||| ||||    
T  8164648 tttccgatccaccaaaggtgggcgactaatccgactcgtgcgtaaaggcatgcgcactggccaagcgtt 8164580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 475
Target Start/End: Original strand, 24506648 - 24506728
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgtt 475  Q
    |||| |||||||||||||| ||||||| | ||  ||||||||||| |||  | ||||||||||| ||||||||||| ||||    
T  24506648 cttttgcaccggtttccgacccaccaatggtgagcgactaatctgactcatgcgtagaggcatgtgcactggtcaagcgtt 24506728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 400 - 504
Target Start/End: Complemental strand, 33689053 - 33688949
Alignment:
Q  400 gcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccga 499  Q
    |||||||||||| | ||||||| | |||| |||||| |||||||  | ||||||||||||||||||| |||  ||||||  ||   ||||| ||||||||    
T  33689053 gcaccggtttccaacccaccaatggtggatgactaaactggctcatgcgtagaggcatgcgcactggccaagtgttattccccttaggaattgaacccga 33688954  T
Q  500 tattc 504  Q
    |||||    
T  33688953 tattc 33688949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 459
Target Start/End: Original strand, 50753341 - 50753405
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgc 459  Q
    |||| |||||||||||||| ||||||| |||| |||||||||| | |||| | ||||||||||||    
T  50753341 cttttgcaccggtttccgacccaccaatgatgaacgactaatccgactcgtgcgtagaggcatgc 50753405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 408 - 532
Target Start/End: Original strand, 52364813 - 52364937
Alignment:
Q  408 ttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattctcc 507  Q
    |||||| ||| ||||| | ||||| |||||  ||||| | ||||||||||||||||||||||| |||| ||    | ||||||||||| || ||||| ||    
T  52364813 ttccgacccatcaaaggtagacgattaatccagctcgtgcgtagaggcatgcgcactggtcaagcgttgttccttctgggaatcgaactcggtattcccc 52364912  T
Q  508 gaataagtccttcgaaggagctcct 532  Q
    |  || |||||| ||||||||||||    
T  52364913 gggtacgtccttggaaggagctcct 52364937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 454
Target Start/End: Complemental strand, 19873479 - 19873420
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagagg 454  Q
    |||| ||||| |||||||| |||| |||||||||||||||||| |||||| | |||||||    
T  19873479 cttttgcaccagtttccgacccacaaaagatggacgactaatccggctcgtgcgtagagg 19873420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 446
Target Start/End: Complemental strand, 21325171 - 21325120
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcg 446  Q
    ||||||||||||||||||| ||| ||||||||| ||| ||||| ||||||||    
T  21325171 ctttcgcaccggtttccgacccatcaaagatgggcgattaatccggctcgcg 21325120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 417 - 475
Target Start/End: Complemental strand, 3755655 - 3755597
Alignment:
Q  417 accaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgtt 475  Q
    ||||||| | ||||||||||| |||||  | |||||| |||||||||||||||||||||    
T  3755655 accaaaggtagacgactaatccggctcatgcgtagagacatgcgcactggtcaaacgtt 3755597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 395 - 465
Target Start/End: Complemental strand, 54237555 - 54237485
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactg 465  Q
    ||||||||||||||||||| |||| || | ||||||||| ||| |||||  | |||||| |||||||||||    
T  54237555 ctttcgcaccggtttccgacccactaatggtggacgacttatccggctcatgcgtagagacatgcgcactg 54237485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 464
Target Start/End: Complemental strand, 10043789 - 10043720
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcact 464  Q
    ||||||||||||||||||| ||||||| | ||  ||| ||||||| |||| | ||||||||||| |||||    
T  10043789 ctttcgcaccggtttccgacccaccaatggtgagcgattaatctgcctcgtgcgtagaggcatgtgcact 10043720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 508
Target Start/End: Original strand, 35998571 - 35998683
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||||||||||||||| || |||| |||| ||||||| |||||   |||| | ||||||||||| |||||| |||| ||||  ||||||  | |||| ||    
T  35998571 ctttcgcaccggtttctgacccactaaaggtggacgattaatccaactcgtgcgtagaggcatgtgcactgatcaagcgtt-gtttccctcgaaatcaaa 35998669  T
Q  495 cccgatattctccg 508  Q
    |||| |||||||||    
T  35998670 cccggtattctccg 35998683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 534
Target Start/End: Complemental strand, 39849144 - 39849040
Alignment:
Q  429 cgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattctccgaataagtccttcgaaggagc 528  Q
    ||||||||| |||||  | |||||||||||| |||||| ||| |||| ||  | | ||||||||||||||| |||| | || || |||||| ||||||||    
T  39849144 cgactaatccggctcatgcgtagaggcatgcacactggccaagcgttgttc-ctctgggaatcgaacccgaaattccctgagtacgtccttggaaggagc 39849046  T
Q  529 tccttg 534  Q
    ||||||    
T  39849045 tccttg 39849040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 457 - 534
Target Start/End: Complemental strand, 50682522 - 50682445
Alignment:
Q  457 tgcgcactggtcaaacgttattttccccgggaatcgaacccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||||||||| ||| |||| || ||||  | |||||||||| ||||| |||||||| ||| |||||||||||| ||||    
T  50682522 tgcgcactggccaagcgttgttctccctagaaatcgaaccctatattttccgaatacgtcattcgaaggagcttcttg 50682445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 395 - 471
Target Start/End: Original strand, 20948061 - 20948137
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaa 471  Q
    ||||||||||| ||| ||||| ||||| | || ||||||||||| | ||| |  ||||||||||| |||||||||||    
T  20948061 ctttcgcaccgattttcgatctaccaacggtgaacgactaatctcgttcgtgcatagaggcatgcacactggtcaaa 20948137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 396 - 504
Target Start/End: Original strand, 34662320 - 34662428
Alignment:
Q  396 tttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaac 495  Q
    ||||||| |||||||| |||||| |||| ||||||||||||  |||||  |  ||||| |||||| ||||  |||||||||||   || |  ||||||||    
T  34662320 tttcgcatcggtttccaatccactaaaggtggacgactaattcggctcatgcatagagacatgcgtactgaccaaacgttattcctcctgaaaatcgaac 34662419  T
Q  496 ccgatattc 504  Q
    |||||||||    
T  34662420 ccgatattc 34662428  T

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Target: scaffold0009 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 395 - 504
Target Start/End: Original strand, 42831 - 42940
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||||||| ||||||||| ||| ||||||||| |||||  | ||||||||||||||||||  ||| | || || ||||  |||||||||    
T  42831 ctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcatgtgtagaggcatgcgcactgaccaagcattgttctccctaggaatcgaa 42930  T
Q  495 cccgatattc 504  Q
    ||||||||||    
T  42931 cccgatattc 42940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 396 - 443
Target Start/End: Complemental strand, 9551 - 9504
Alignment:
Q  396 tttcgcaccggtttccgatccaccaaagatggacgactaatctggctc 443  Q
    ||||||||||||||| || ||||||||| |||||||||||| ||||||    
T  9551 tttcgcaccggtttctgacccaccaaaggtggacgactaatttggctc 9504  T

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Target: scaffold0002 (Bit Score: 48; Significance: 4e-18; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 395 - 534
Target Start/End: Complemental strand, 680 - 541
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||||||| ||||||||| ||  |||||||||||||||    |||||||||||| ||||| ||||  ||| ||  ||| | ||||||||    
T  680 ctttcgcaccggtttccgacccaccaaaggtgagcgactaatctggctcatacgtagaggcatgcacactgatcaagtgttgttccccctgcgaatcgaa 581  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||| ||||| |||  || |||||| ||||||||||||||    
T  580 cccggtattccccgggtacgtccttggaaggagctccttg 541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 395 - 534
Target Start/End: Complemental strand, 319532 - 319393
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||||||  ||||||||| |||||||||||||  ||||  |  |||||| ||||||||||| ||| |||| ||  |||  | |||| ||    
T  319532 ctttcgcaccggtttccgccccaccaaaggtggacgactaatccagctcatgcatagagggatgcgcactggccaagcgttgttccccctagaaatcaaa 319433  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||| ||||| ||| ||| |||||| ||||||||||||||    
T  319432 cccggtattccccggatacgtccttggaaggagctccttg 319393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 398 - 534
Target Start/End: Complemental strand, 68621 - 68488
Alignment:
Q  398 tcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaaccc 497  Q
    |||||||||||| ||| ||||||||| ||| ||||||||| |||||| | ||||||||||||||||    ||| |||| ||  ||| |||||||||||||    
T  68621 tcgcaccggttttcgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcac---ccaagcgttgttccccctgggaatcgaaccc 68525  T
Q  498 gatattctccgaataagtccttcgaaggagctccttg 534  Q
    ||||||  |||  || |||||| ||||||||||||||    
T  68524 gatatttcccgggtacgtccttggaaggagctccttg 68488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 395 - 504
Target Start/End: Complemental strand, 6965 - 6856
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||||||| ||||||||| ||  ||||||||| |||||  | ||||||||||||||||||| |||  ||| ||  ||| ||||||||||    
T  6965 ctttcgcaccggtttccgacccaccaaaggtgagcgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaa 6866  T
Q  495 cccgatattc 504  Q
    |||| |||||    
T  6865 cccggtattc 6856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 395 - 504
Target Start/End: Original strand, 8700 - 8809
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||||||||| |||||||| ||||||||| |||||||||||||  ||||  | ||||||||| ||||||||| ||| |||| ||  ||| ||||||||||    
T  8700 ctttcgcaccagtttccgacccaccaaaggtggacgactaatccagctcatgcgtagaggcaagcgcactggccaagcgttgttccccctgggaatcgaa 8799  T
Q  495 cccgatattc 504  Q
    |||| |||||    
T  8800 cccggtattc 8809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 44; Significance: 9e-16; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 405 - 536
Target Start/End: Complemental strand, 9945 - 9814
Alignment:
Q  405 ggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattc 504  Q
    |||||| || ||||||||| ||||||||||||| |||||| | ||||||||||||||||||| ||| |||| ||  ||| || ||||||| ||| |||||    
T  9945 ggtttctgacccaccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccctggaaatcgaatccggtattc 9846  T
Q  505 tccgaataagtccttcgaaggagctccttgtc 536  Q
      |  |||  ||||| ||||||||||||||||    
T  9845 ctcagatacatccttggaaggagctccttgtc 9814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 44; Significance: 9e-16; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 395 - 534
Target Start/End: Complemental strand, 41154 - 41015
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||||| ||||||||||||  |||||||||||| ||||||||| |||||| | |||||||||||| |||||  |||  ||| ||  ||  | ||||||||    
T  41154 ctttcgaaccggtttccgactcaccaaagatgggcgactaatccggctcgtgcgtagaggcatgcacactgaccaagtgttgttccccttgagaatcgaa 41055  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||||||||| | || || |||| | ||||||||||||||    
T  41054 cccgatattccctgagtacgtccatggaaggagctccttg 41015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 44; Significance: 9e-16; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 395 - 494
Target Start/End: Original strand, 155710 - 155809
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||||||||||| |||||| ||||||||| ||| ||||||||| |||||| | ||||||||||||||||| | ||| |||| ||  ||| ||||||||||    
T  155710 ctttcgcaccggcttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactagccaagcgttgttccccctgggaatcgaa 155809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 396 - 530
Target Start/End: Original strand, 25784 - 25918
Alignment:
Q  396 tttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaac 495  Q
    ||||||||||||||| || |||  |||| |||  ||||||||||| || || |||||| |||||||||||| ||| |||| || ||||  ||||||||||    
T  25784 tttcgcaccggtttctgacccagtaaaggtgggtgactaatctggttcacgcgtagagtcatgcgcactggccaagcgttgttctccctaggaatcgaac 25883  T
Q  496 ccgatattctccgaataagtccttcgaaggagctc 530  Q
    |   ||||| |||| || || ||| ||||||||||    
T  25884 cttgtattccccgagtacgtacttggaaggagctc 25918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 4)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 429 - 534
Target Start/End: Original strand, 271107 - 271212
Alignment:
Q  429 cgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattctccgaataagtccttcgaaggagc 528  Q
    ||||||| | |||||| | |||||| |||||||||||  ||| |||| ||  ||| ||||||||||||||||||||||||  || |||||| ||||||||    
T  271107 cgactaacccggctcgtgcgtagagacatgcgcactgaccaagcgttgttccccctgggaatcgaacccgatattctccgggtacgtccttggaaggagc 271206  T
Q  529 tccttg 534  Q
    ||||||    
T  271207 tccttg 271212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 395 - 472
Target Start/End: Complemental strand, 219479 - 219402
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaac 472  Q
    |||| |||||||||| ||||||| ||||| |||||||||||||  | ||| | ||||||||||||||||||| |||||    
T  219479 cttttgcaccggttttcgatccatcaaaggtggacgactaatccagttcgtgcgtagaggcatgcgcactggccaaac 219402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 395 - 472
Target Start/End: Original strand, 250024 - 250101
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaac 472  Q
    ||||||||||| ||||||| |||||||||  |  ||||||||| |||||| | ||||||||||||||||||| |||||    
T  250024 ctttcgcaccgatttccgacccaccaaaggcgagcgactaatccggctcgtgcgtagaggcatgcgcactggccaaac 250101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 429 - 529
Target Start/End: Original strand, 249338 - 249438
Alignment:
Q  429 cgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgatattctccgaataagtccttcgaaggagc 528  Q
    ||||||||| | |||| | ||||||| ||| ||||||||||| ||||||| |||| | |||||||||| | ||||| || |||| |||||| ||||||||    
T  249338 cgactaatccgactcgtgcgtagaggtatgtgcactggtcaagcgttattctccctgagaatcgaacctggtattccccaaatacgtccttagaaggagc 249437  T
Q  529 t 529  Q
    |    
T  249438 t 249438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0209 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 395 - 534
Target Start/End: Complemental strand, 12683 - 12546
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||||||||||  ||||| ||||| ||| ||||||||| | |||  | ||||||||||||||||||||||| |||  | |||||  |||||||||    
T  12683 ctttcgcaccggtttctaatccatcaaaggtgggcgactaatccgactcatgcgtagaggcatgcgcactggtcaagcgt--tgttccctaggaatcgaa 12586  T
Q  495 cccgatattctccgaataagtccttcgaaggagctccttg 534  Q
    |||| ||||   ||| || |||||| |||| |||||||||    
T  12585 cccggtatttctcgagtacgtccttggaagtagctccttg 12546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 395 - 466
Target Start/End: Original strand, 1613 - 1684
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactgg 466  Q
    ||||||||||||||| ||| ||||||||| ||| |||||||| ||||||  | |||||||||||||||||||    
T  1613 ctttcgcaccggttttcgacccaccaaaggtgggcgactaatttggctcatgcgtagaggcatgcgcactgg 1684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 395 - 533
Target Start/End: Complemental strand, 16989 - 16851
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    |||||||| |||||||| | ||||||||| ||  |||||||||||||||| | |||||| ||| |||||||  ||| |||| ||| ||| | |||| |||    
T  16989 ctttcgcatcggtttccaacccaccaaaggtgagcgactaatctggctcgtgcgtagagacatacgcactgaccaagcgttgtttcccctgagaattgaa 16890  T
Q  495 cccgatattctccgaataagtccttcgaaggagctcctt 533  Q
    ||| |||||| | ||||   ||||| |||||||||||||    
T  16889 cccaatattccctgaatgcatccttggaaggagctcctt 16851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 395 - 439
Target Start/End: Complemental strand, 25195 - 25151
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctg 439  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||    
T  25195 ctttcgcaccggtttccgatccaccaaaggtggacgattaatctg 25151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 36; Significance: 0.00000000005; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 395 - 466
Target Start/End: Original strand, 7834 - 7905
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactgg 466  Q
    |||||| |||||||||||||||||||||| ||| |||||||||  |||   | |||||||||||||||||||    
T  7834 ctttcgtaccggtttccgatccaccaaaggtgggcgactaatccagctaatgcgtagaggcatgcgcactgg 7905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 395 - 475
Target Start/End: Original strand, 94979 - 95060
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaa-gatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgtt 475  Q
    |||| |||||| ||||||| |||||||| | ||| ||||||||| |||||  | ||| ||||||||||||||||||||||||    
T  94979 cttttgcaccgatttccgacccaccaaatggtgggcgactaatccggctcatgcgtaaaggcatgcgcactggtcaaacgtt 95060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 404 - 501
Target Start/End: Complemental strand, 17491 - 17394
Alignment:
Q  404 cggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaacccgata 501  Q
    |||||||||| ||| ||| | ||| ||||||||| |||||| | ||||| ||||||||||||||||| | || ||| ||| | |||||||| ||||||    
T  17491 cggtttccgacccatcaatggtgggcgactaatccggctcgtgtgtagaagcatgcgcactggtcaagcattttttcccctgagaatcgaatccgata 17394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 475
Target Start/End: Complemental strand, 12780 - 12700
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgtt 475  Q
    |||||||||||||||| || ||| ||||| ||| ||||||||| || ||| | |||||||||||| |||||| ||| ||||    
T  12780 ctttcgcaccggtttctgacccatcaaaggtgggcgactaatccggttcgtgcgtagaggcatgcacactggccaagcgtt 12700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 475
Target Start/End: Original strand, 58032 - 58112
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgtt 475  Q
    ||||||||||||| ||||||||||||||||| | |||||||||   |||  | ||||||| || | |||||||||||||||    
T  58032 ctttcgcaccggtatccgatccaccaaagataggcgactaatccaactcatgcgtagaggtatacacactggtcaaacgtt 58112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 395 - 497
Target Start/End: Complemental strand, 26293 - 26191
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcactggtcaaacgttattttccccgggaatcgaa 494  Q
    ||||||||| |||||||||  || |||   ||||||||||||| |||||| | |||||||||||| |||||| ||| |||| ||  ||| || |||||||    
T  26293 ctttcgcactggtttccgactcatcaattgtggacgactaatccggctcgtgcgtagaggcatgcacactggccaagcgttgttccccctggaaatcgaa 26194  T
Q  495 ccc 497  Q
    |||    
T  26193 ccc 26191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 436
Target Start/End: Complemental strand, 8273 - 8232
Alignment:
Q  395 ctttcgcaccggtttccgatccaccaaagatggacgactaat 436  Q
    ||||||||||||||||||| | ||||||| ||||||||||||    
T  8273 ctttcgcaccggtttccgacctaccaaaggtggacgactaat 8232  T

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Target: scaffold0155 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 396 - 464
Target Start/End: Complemental strand, 19364 - 19296
Alignment:
Q  396 tttcgcaccggtttccgatccaccaaagatggacgactaatctggctcgcgagtagaggcatgcgcact 464  Q
    ||||||||||||||||||||||| ||  |||| ||||||||| |||||  | |||||||  ||||||||    
T  19364 tttcgcaccggtttccgatccactaataatggccgactaatccggctcatgcgtagaggtctgcgcact 19296  T

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