View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8530_low_14 (Length: 329)
Name: NF8530_low_14
Description: NF8530
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8530_low_14 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 311; Significance: 1e-175; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 15 - 329
Target Start/End: Complemental strand, 32046590 - 32046276
Alignment:
| Q |
15 |
gacatcatgtgtagtactaaattaatctatgagttgcaaagtttttgctgactttccgggccaaattttgtcaacgaaacgacctacaaatgggaccata |
114 |
Q |
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| T |
32046590 |
gacatcatgtgtagtactaaattaatctatgagttgcaaagtttttgctgactttccgggccaaattttgtcaacgaaacgacctacaaatgggaccata |
32046491 |
T |
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| Q |
115 |
tctaacacaaatttcttcactatcctagtcaagatttgatgaaccgcaaataaaattgaagtagcacttatgatagtgaccttggagatatttttccctc |
214 |
Q |
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| T |
32046490 |
tctaacacaaatttcttcactatcctagtcaagatttgatgaaccgcaaataaaattgaagtagcacttatgatagtgaccttggagatatttttccctc |
32046391 |
T |
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| Q |
215 |
atttatctcgttctaaattttgttcatgtactcaaatttgggttttggtatcagcctgtaaaactcacatgtaaagtgagaaatgtttaagcgttactga |
314 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
32046390 |
atttatctcgttctaaattttgttcatgtactcaaatttgggttttggtatcagcctgtaaaactcacatgtaaagtgagaaatgtttaagctttactga |
32046291 |
T |
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| Q |
315 |
ttttcactgatttcc |
329 |
Q |
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||||||||||||||| |
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| T |
32046290 |
ttttcactgatttcc |
32046276 |
T |
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