View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8531_high_12 (Length: 240)

Name: NF8531_high_12
Description: NF8531
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8531_high_12
NF8531_high_12
[»] chr8 (22 HSPs)
chr8 (145-240)||(29916178-29916273)
chr8 (18-75)||(29916278-29916335)
chr8 (169-240)||(42795117-42795188)
chr8 (177-240)||(42795142-42795205)
chr8 (178-240)||(9203415-9203477)
chr8 (176-240)||(42149173-42149237)
chr8 (176-239)||(15754483-15754546)
chr8 (179-237)||(3225812-3225870)
chr8 (178-240)||(42149157-42149219)
chr8 (176-240)||(3611798-3611862)
chr8 (176-239)||(1647069-1647132)
chr8 (186-237)||(5888386-5888437)
chr8 (186-237)||(10117020-10117071)
chr8 (169-240)||(35969685-35969755)
chr8 (179-237)||(2805863-2805921)
chr8 (178-240)||(8568867-8568929)
chr8 (179-237)||(24017750-24017808)
chr8 (178-240)||(39655448-39655510)
chr8 (186-223)||(9015880-9015917)
chr8 (188-240)||(14381279-14381331)
chr8 (176-240)||(38883975-38884039)
chr8 (180-240)||(42631826-42631886)
[»] chr7 (43 HSPs)
chr7 (178-240)||(22332328-22332390)
chr7 (179-240)||(22332344-22332405)
chr7 (186-237)||(21586864-21586915)
chr7 (178-240)||(19531984-19532046)
chr7 (186-240)||(27942364-27942418)
chr7 (178-240)||(37066213-37066275)
chr7 (178-240)||(48590632-48590694)
chr7 (178-211)||(3149034-3149067)
chr7 (186-239)||(26904820-26904873)
chr7 (179-240)||(47778461-47778522)
chr7 (172-240)||(24733140-24733208)
chr7 (188-240)||(27554538-27554590)
chr7 (193-240)||(12171706-12171753)
chr7 (176-239)||(12307865-12307928)
chr7 (186-237)||(23797398-23797449)
chr7 (178-240)||(3498341-3498403)
chr7 (178-220)||(24211618-24211660)
chr7 (178-240)||(27942372-27942434)
chr7 (178-240)||(28003209-28003271)
chr7 (178-240)||(30005923-30005985)
chr7 (178-240)||(37066229-37066291)
chr7 (178-240)||(46221109-46221171)
chr7 (178-240)||(46477180-46477242)
chr7 (179-237)||(46495418-46495476)
chr7 (178-240)||(46578296-46578358)
chr7 (186-240)||(46658779-46658833)
chr7 (178-240)||(48392913-48392975)
chr7 (172-217)||(3341959-3342004)
chr7 (178-239)||(4027266-4027327)
chr7 (179-216)||(6803444-6803481)
chr7 (180-237)||(31319549-31319606)
chr7 (176-240)||(1565459-1565523)
chr7 (179-239)||(4406127-4406187)
chr7 (172-236)||(7104734-7104798)
chr7 (169-233)||(19197765-19197829)
chr7 (172-240)||(23092379-23092447)
chr7 (178-238)||(24166294-24166354)
chr7 (188-240)||(27554544-27554596)
chr7 (176-240)||(27940774-27940838)
chr7 (176-240)||(33471519-33471583)
chr7 (176-240)||(33471537-33471601)
chr7 (178-206)||(39728596-39728624)
chr7 (176-240)||(46221125-46221189)
[»] chr5 (45 HSPs)
chr5 (172-240)||(27990382-27990450)
chr5 (169-240)||(12165331-12165402)
chr5 (186-237)||(3100455-3100506)
chr5 (169-240)||(35907854-35907925)
chr5 (179-240)||(9004994-9005055)
chr5 (178-240)||(11784333-11784395)
chr5 (178-240)||(15965987-15966049)
chr5 (178-240)||(21152635-21152697)
chr5 (178-240)||(21159770-21159832)
chr5 (178-240)||(21163577-21163639)
chr5 (178-240)||(35172461-35172523)
chr5 (171-240)||(35907879-35907948)
chr5 (178-239)||(40905895-40905956)
chr5 (176-240)||(13420481-13420545)
chr5 (176-240)||(14416435-14416499)
chr5 (180-240)||(34147973-34148033)
chr5 (180-240)||(36137062-36137122)
chr5 (193-237)||(38370437-38370481)
chr5 (176-240)||(38860829-38860893)
chr5 (189-240)||(13157375-13157426)
chr5 (173-240)||(15966669-15966736)
chr5 (186-237)||(17153462-17153513)
chr5 (186-232)||(71298-71344)
chr5 (179-221)||(780724-780766)
chr5 (178-240)||(7336886-7336948)
chr5 (178-240)||(14064841-14064903)
chr5 (178-240)||(15966003-15966065)
chr5 (178-240)||(18942017-18942079)
chr5 (178-240)||(21152619-21152681)
chr5 (178-240)||(21159754-21159816)
chr5 (178-240)||(21163561-21163623)
chr5 (191-237)||(31963569-31963615)
chr5 (173-239)||(33545859-33545925)
chr5 (172-206)||(36329161-36329195)
chr5 (178-240)||(37685001-37685063)
chr5 (178-239)||(12891336-12891397)
chr5 (178-239)||(31691004-31691065)
chr5 (187-240)||(35172477-35172530)
chr5 (169-237)||(10495233-10495301)
chr5 (188-240)||(13311215-13311267)
chr5 (179-239)||(14274166-14274226)
chr5 (176-220)||(18942053-18942097)
chr5 (176-220)||(34148007-34148051)
chr5 (176-240)||(37637298-37637362)
chr5 (188-240)||(37944643-37944695)
[»] chr4 (43 HSPs)
chr4 (179-240)||(21003972-21004033)
chr4 (176-239)||(15641252-15641315)
chr4 (178-240)||(51126136-51126198)
chr4 (189-237)||(22493618-22493666)
chr4 (186-237)||(36072609-36072660)
chr4 (179-237)||(5816571-5816629)
chr4 (178-240)||(42013177-42013239)
chr4 (178-240)||(44551245-44551307)
chr4 (178-240)||(51126152-51126214)
chr4 (176-237)||(9992631-9992692)
chr4 (179-240)||(20542850-20542911)
chr4 (171-240)||(33118222-33118291)
chr4 (179-240)||(40952586-40952647)
chr4 (189-237)||(10572771-10572819)
chr4 (189-237)||(48603606-48603654)
chr4 (186-237)||(3511748-3511799)
chr4 (186-237)||(4484113-4484164)
chr4 (179-230)||(7740547-7740598)
chr4 (186-237)||(16170949-16171000)
chr4 (186-237)||(18423931-18423982)
chr4 (186-237)||(18488559-18488610)
chr4 (178-237)||(33118248-33118307)
chr4 (186-237)||(40881477-40881528)
chr4 (186-233)||(50686059-50686106)
chr4 (179-237)||(4708586-4708644)
chr4 (189-239)||(6974975-6975025)
chr4 (178-240)||(17028280-17028342)
chr4 (186-240)||(24275256-24275310)
chr4 (178-240)||(24529604-24529666)
chr4 (178-240)||(53403022-53403084)
chr4 (179-240)||(32112361-32112422)
chr4 (174-223)||(33150600-33150649)
chr4 (178-239)||(42911663-42911724)
chr4 (173-238)||(54569405-54569470)
chr4 (178-239)||(55229596-55229657)
chr4 (179-239)||(4044330-4044390)
chr4 (193-233)||(23004016-23004056)
chr4 (177-237)||(25700507-25700567)
chr4 (186-226)||(35151722-35151762)
chr4 (173-237)||(38949708-38949772)
chr4 (176-240)||(39754146-39754210)
chr4 (176-240)||(41788968-41789032)
chr4 (176-240)||(49745492-49745556)
[»] chr2 (45 HSPs)
chr2 (172-229)||(5762526-5762583)
chr2 (169-233)||(35024392-35024456)
chr2 (178-240)||(10041589-10041651)
chr2 (179-240)||(9071252-9071313)
chr2 (176-240)||(921863-921927)
chr2 (186-237)||(23377981-23378032)
chr2 (186-237)||(32630445-32630496)
chr2 (186-237)||(37396243-37396294)
chr2 (176-239)||(42263063-42263126)
chr2 (186-240)||(921855-921909)
chr2 (178-240)||(25668442-25668504)
chr2 (178-240)||(30202515-30202577)
chr2 (179-237)||(33555209-33555267)
chr2 (178-240)||(34466145-34466207)
chr2 (178-240)||(41823772-41823834)
chr2 (178-240)||(43514803-43514865)
chr2 (178-239)||(3463198-3463259)
chr2 (180-233)||(10602348-10602401)
chr2 (171-240)||(42955057-42955126)
chr2 (176-240)||(12440677-12440741)
chr2 (176-240)||(17378102-17378166)
chr2 (176-240)||(27327877-27327941)
chr2 (185-237)||(36547391-36547443)
chr2 (185-240)||(4898212-4898267)
chr2 (185-240)||(4945606-4945661)
chr2 (186-237)||(26003485-26003536)
chr2 (176-239)||(32514897-32514960)
chr2 (176-239)||(33618226-33618289)
chr2 (178-240)||(4898196-4898258)
chr2 (178-240)||(4945590-4945652)
chr2 (179-237)||(10996278-10996336)
chr2 (178-240)||(17843982-17844044)
chr2 (178-240)||(17843998-17844060)
chr2 (178-240)||(20195336-20195398)
chr2 (173-239)||(32514916-32514982)
chr2 (174-240)||(41823788-41823854)
chr2 (178-239)||(7354801-7354862)
chr2 (179-240)||(10099599-10099660)
chr2 (189-233)||(15916787-15916831)
chr2 (176-240)||(29573861-29573925)
chr2 (172-220)||(31596822-31596870)
chr2 (176-240)||(32070490-32070554)
chr2 (173-237)||(37195078-37195142)
chr2 (186-237)||(40204479-40204533)
chr2 (177-217)||(43893147-43893187)
[»] chr3 (40 HSPs)
chr3 (169-240)||(51165846-51165917)
chr3 (189-240)||(4181978-4182029)
chr3 (169-220)||(19843940-19843991)
chr3 (177-240)||(44414020-44414083)
chr3 (186-237)||(52215919-52215970)
chr3 (178-240)||(7933565-7933627)
chr3 (178-240)||(39530426-39530488)
chr3 (178-240)||(40504113-40504175)
chr3 (179-237)||(45736737-45736795)
chr3 (179-237)||(47334674-47334732)
chr3 (179-240)||(1043970-1044031)
chr3 (179-239)||(26104822-26104882)
chr3 (190-234)||(29389370-29389414)
chr3 (188-240)||(33412506-33412558)
chr3 (176-239)||(1927530-1927593)
chr3 (186-237)||(10872722-10872773)
chr3 (186-237)||(12744940-12744991)
chr3 (176-240)||(17004987-17005053)
chr3 (186-237)||(26121578-26121629)
chr3 (186-237)||(26244419-26244470)
chr3 (178-237)||(36571425-36571483)
chr3 (186-233)||(37897721-37897768)
chr3 (186-237)||(40065371-40065422)
chr3 (178-240)||(16127779-16127841)
chr3 (178-240)||(21659169-21659231)
chr3 (178-240)||(21659185-21659247)
chr3 (179-237)||(29222853-29222911)
chr3 (178-240)||(46739338-46739400)
chr3 (178-220)||(46739374-46739416)
chr3 (169-206)||(10344404-10344441)
chr3 (179-240)||(38446771-38446832)
chr3 (179-240)||(52638065-52638126)
chr3 (176-240)||(5326774-5326837)
chr3 (176-240)||(13083900-13083964)
chr3 (172-240)||(23783325-23783393)
chr3 (188-240)||(33412512-33412564)
chr3 (169-221)||(39289583-39289635)
chr3 (176-240)||(40504095-40504159)
chr3 (193-237)||(43599148-43599192)
chr3 (176-240)||(54680536-54680600)
[»] scaffold0635 (1 HSPs)
scaffold0635 (178-240)||(5419-5481)
[»] scaffold0036 (1 HSPs)
scaffold0036 (179-237)||(89648-89706)
[»] chr1 (45 HSPs)
chr1 (179-237)||(11324483-11324541)
chr1 (179-237)||(11482504-11482562)
chr1 (174-239)||(38847329-38847394)
chr1 (169-233)||(13145786-13145850)
chr1 (177-240)||(6169857-6169920)
chr1 (169-216)||(17310440-17310487)
chr1 (186-237)||(31998239-31998290)
chr1 (186-237)||(50550158-50550209)
chr1 (178-240)||(15278596-15278658)
chr1 (178-240)||(31909780-31909842)
chr1 (186-240)||(35049979-35050033)
chr1 (178-239)||(15278613-15278674)
chr1 (178-239)||(15311503-15311564)
chr1 (179-240)||(35049964-35050025)
chr1 (188-240)||(3384270-3384322)
chr1 (179-239)||(23575366-23575426)
chr1 (179-239)||(28725514-28725574)
chr1 (176-240)||(31909796-31909860)
chr1 (179-239)||(41161497-41161557)
chr1 (189-237)||(50503225-50503273)
chr1 (169-240)||(17310465-17310536)
chr1 (169-240)||(27549067-27549138)
chr1 (178-233)||(34184488-34184543)
chr1 (186-237)||(34953946-34953997)
chr1 (176-239)||(38149412-38149475)
chr1 (169-240)||(41154955-41155026)
chr1 (186-237)||(42761492-42761543)
chr1 (178-237)||(48636768-48636827)
chr1 (179-221)||(9590810-9590852)
chr1 (179-233)||(26674240-26674294)
chr1 (186-240)||(39216150-39216204)
chr1 (189-235)||(40988404-40988450)
chr1 (178-240)||(47011275-47011337)
chr1 (178-240)||(48605117-48605179)
chr1 (179-240)||(23392569-23392630)
chr1 (178-239)||(42761281-42761342)
chr1 (178-239)||(47991808-47991869)
chr1 (176-240)||(8751461-8751525)
chr1 (176-240)||(12993553-12993617)
chr1 (176-240)||(24478694-24478758)
chr1 (176-240)||(25378304-25378368)
chr1 (176-240)||(38824320-38824384)
chr1 (189-237)||(39362851-39362899)
chr1 (176-240)||(50998333-50998397)
chr1 (176-240)||(52253585-52253649)
[»] scaffold0121 (1 HSPs)
scaffold0121 (174-239)||(17461-17526)
[»] scaffold0002 (1 HSPs)
scaffold0002 (176-239)||(491898-491961)
[»] chr6 (15 HSPs)
chr6 (186-237)||(12218495-12218546)
chr6 (178-240)||(3212272-3212334)
chr6 (178-240)||(10731504-10731566)
chr6 (189-239)||(12383637-12383687)
chr6 (178-239)||(10731521-10731582)
chr6 (169-229)||(3586062-3586122)
chr6 (176-240)||(7418922-7418986)
chr6 (179-223)||(11637202-11637246)
chr6 (172-240)||(26498618-26498686)
chr6 (186-240)||(15467612-15467666)
chr6 (186-240)||(15467620-15467674)
chr6 (172-212)||(3773193-3773233)
chr6 (181-237)||(13506868-13506924)
chr6 (188-240)||(21506510-21506562)
chr6 (176-216)||(24151004-24151044)
[»] scaffold0340 (1 HSPs)
scaffold0340 (186-240)||(14072-14126)
[»] scaffold0172 (2 HSPs)
scaffold0172 (178-240)||(11615-11677)
scaffold0172 (178-240)||(11631-11693)
[»] scaffold0047 (1 HSPs)
scaffold0047 (178-223)||(63469-63514)
[»] scaffold1786 (1 HSPs)
scaffold1786 (179-240)||(557-618)
[»] scaffold0111 (2 HSPs)
scaffold0111 (178-238)||(38056-38116)
scaffold0111 (179-219)||(38385-38425)


Alignment Details
Target: chr8 (Bit Score: 76; Significance: 3e-35; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 145 - 240
Target Start/End: Complemental strand, 29916273 - 29916178
Alignment:
Q  145 tcactcggttgttaatcattggttaattttaattttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    ||||||||||||||||||| |||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  29916273 tcactcggttgttaatcataggttaattttgattttttagattcattcaattgatgatgtatatgatctatattatagactacatacatcattaat 29916178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 29916335 - 29916278
Alignment:
Q  18 agtttaaatgaagatgatcttgactcttctacccttacatcatattaatgttgtaaaa 75  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  29916335 agtttaaatgaagatggtcttgactcttctacccttacatcatattaatgttgtaaaa 29916278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 169 - 240
Target Start/End: Original strand, 42795117 - 42795188
Alignment:
Q  169 aattttaattttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||  | |||||||||||||    
T  42795117 aattttaattttttaagttcattcaattaatgatgtatgtgatctatattatggaacatatacatcattaat 42795188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 177 - 240
Target Start/End: Complemental strand, 42795205 - 42795142
Alignment:
Q  177 ttttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||||||||||||||||| |||||||||||| || ||| ||||||| |||||||||||||||    
T  42795205 ttttttaagttcattcaattaatgatgtatatgttccataatatagatcacatacatcattaat 42795142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 178 - 240
Target Start/End: Original strand, 9203415 - 9203477
Alignment:
Q  178 tttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    ||||||||||||||| ||| ||||||||||||||  ||||||||||  |||||||||||||||    
T  9203415 tttttaagttcattcgattaatgatgtatatgattcatattatagaccacatacatcattaat 9203477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 176 - 240
Target Start/End: Complemental strand, 42149237 - 42149173
Alignment:
Q  176 attttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||||| |||||||||||| |||||||||||| ||| || |||| || |||||||||||||||    
T  42149237 attttttatgttcattcaattaatgatgtatatggtctctaatataaatcacatacatcattaat 42149173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 239
Target Start/End: Complemental strand, 15754546 - 15754483
Alignment:
Q  176 attttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaa 239  Q
    |||||||| ||||||||| || ||||||||| |||||||||||||  | |||||||||||||||    
T  15754546 attttttaggttcattcatttaatgatgtatgtgatctatattatgaactacatacatcattaa 15754483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 179 - 237
Target Start/End: Original strand, 3225812 - 3225870
Alignment:
Q  179 ttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcatt 237  Q
    |||||| || |||||||| |||||||||||||||| |||||||||  ||||||||||||    
T  3225812 ttttaaatttattcaattaatgatgtatatgatctttattatagaccacatacatcatt 3225870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 178 - 240
Target Start/End: Original strand, 42149157 - 42149219
Alignment:
Q  178 tttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    ||||||||||||||||||| ||||||||| |||| ||||||| |||  | |||||||||||||    
T  42149157 tttttaagttcattcaattaatgatgtatgtgatttatattagagaccatatacatcattaat 42149219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 240
Target Start/End: Original strand, 3611798 - 3611862
Alignment:
Q  176 attttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||||| |||||||||||| ||||||||| || |  ||||||||||  |||||||||||||||    
T  3611798 attttttaggttcattcaattaatgatgtatgtggttcatattatagaccacatacatcattaat 3611862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 239
Target Start/End: Original strand, 1647069 - 1647132
Alignment:
Q  176 attttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaa 239  Q
    |||||||| ||||||||| || ||||||||| ||||| |||||||  || ||||||||||||||    
T  1647069 attttttaggttcattcatttaatgatgtatgtgatccatattatgaatcacatacatcattaa 1647132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 237
Target Start/End: Complemental strand, 5888437 - 5888386
Alignment:
Q  186 ttcattcaattgatgatgtatatgatctatattatagattacatacatcatt 237  Q
    ||||||||||| |||||||||||| ||| |||||||||  ||||||||||||    
T  5888437 ttcattcaattaatgatgtatatggtctttattatagacaacatacatcatt 5888386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 237
Target Start/End: Complemental strand, 10117071 - 10117020
Alignment:
Q  186 ttcattcaattgatgatgtatatgatctatattatagattacatacatcatt 237  Q
    ||||||||||| |||||||||||||| | |||||||||  ||||||||||||    
T  10117071 ttcattcaattaatgatgtatatgatatttattatagaccacatacatcatt 10117020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 240
Target Start/End: Original strand, 35969685 - 35969755
Alignment:
Q  169 aattttaattttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    ||||||||||||| | |||||||||||| |||||||||||| | |||| |||| | ||||||||| ||||||    
T  35969685 aattttaattttt-aggttcattcaattaatgatgtatatggtttataatataaactacatacattattaat 35969755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 237
Target Start/End: Complemental strand, 2805921 - 2805863
Alignment:
Q  179 ttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcatt 237  Q
    |||||| ||||||||||| || ||||||||||||| |||||||||  ||||| ||||||    
T  2805921 ttttaaattcattcaattaataatgtatatgatctttattatagaccacatatatcatt 2805863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 240
Target Start/End: Complemental strand, 8568929 - 8568867
Alignment:
Q  178 tttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||| |||||||||||| ||||||||| || |  ||||||||||  |||||||||||||||    
T  8568929 tttttaggttcattcaattaatgatgtatgtggttcatattatagaccacatacatcattaat 8568867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 237
Target Start/End: Original strand, 24017750 - 24017808
Alignment:
Q  179 ttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcatt 237  Q
    |||||| ||| ||||||| |||||||||||||||| ||||| |||  ||||||||||||    
T  24017750 ttttaaattccttcaattaatgatgtatatgatctttattacagaccacatacatcatt 24017808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 240
Target Start/End: Original strand, 39655448 - 39655510
Alignment:
Q  178 tttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||| |||||||||||| ||||||||| || || ||||||| ||  |||||||||||||||    
T  39655448 tttttaggttcattcaattaatgatgtatgtggtccatattatggaccacatacatcattaat 39655510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 223
Target Start/End: Complemental strand, 9015917 - 9015880
Alignment:
Q  186 ttcattcaattgatgatgtatatgatctatattataga 223  Q
    ||||||||||| |||||||||||||||| |||||||||    
T  9015917 ttcattcaattaatgatgtatatgatctttattataga 9015880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 240
Target Start/End: Original strand, 14381279 - 14381331
Alignment:
Q  188 cattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    ||||||||| ||||||||| || ||| ||||||| || |||||||||||||||    
T  14381279 cattcaattaatgatgtatgtggtctttattatatatcacatacatcattaat 14381331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 240
Target Start/End: Original strand, 38883975 - 38884039
Alignment:
Q  176 attttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||||| |||||||||||| ||||||||| || | |||| ||| ||  |||||||||||||||    
T  38883975 attttttaggttcattcaattaatgatgtatgtggtttataatatggacaacatacatcattaat 38884039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 240
Target Start/End: Complemental strand, 42631886 - 42631826
Alignment:
Q  180 tttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||| |||||||||||| ||||||||| || || |||||||| |  |||||||||||||||    
T  42631886 tttaggttcattcaattaatgatgtatgtggtccatattataaaccacatacatcattaat 42631826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 6e-18; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 178 - 240
Target Start/End: Original strand, 22332328 - 22332390
Alignment:
Q  178 tttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    ||||||||||||||||||| ||||||||||||||| ||| ||||||| |||||||||||||||    
T  22332328 tttttaagttcattcaattaatgatgtatatgatccataatatagatcacatacatcattaat 22332390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 240
Target Start/End: Complemental strand, 22332405 - 22332344
Alignment:
Q  179 ttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    ||||||||||||| |||| ||||||||| ||||||||||||| ||| | |||||||||||||    
T  22332405 ttttaagttcattgaattaatgatgtatgtgatctatattatggatcatatacatcattaat 22332344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 186 - 237
Target Start/End: Complemental strand, 21586915 - 21586864
Alignment:
Q  186 ttcattcaattgatgatgtatatgatctatattatagattacatacatcatt 237  Q
    ||||||||||| |||||||||||||||| |||||||||  ||||||||||||    
T  21586915 ttcattcaattaatgatgtatatgatctttattatagaccacatacatcatt 21586864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 178 - 240
Target Start/End: Original strand, 19531984 - 19532046
Alignment:
Q  178 tttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||| |||||||||||| ||||||||| || || |||||||| | ||||||||||||||||    
T  19531984 tttttaggttcattcaattaatgatgtatgtggtccatattataaactacatacatcattaat 19532046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 27942364 - 27942418
Alignment:
Q  186 ttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    ||||||||||| ||||||||||||||| |||||||| |  |||||||||||||||    
T  27942364 ttcattcaattaatgatgtatatgatccatattataaaccacatacatcattaat 27942418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 178 - 240
Target Start/End: Original strand, 37066213 - 37066275
Alignment:
Q  178 tttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||| |||||||||||| ||||||||| || |||||||||| ||  |||||||||||||||    
T  37066213 tttttaggttcattcaattaatgatgtatgtggtctatattatggaccacatacatcattaat 37066275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 178 - 240
Target Start/End: Complemental strand, 48590694 - 48590632
Alignment:
Q  178 tttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    ||||||||||||||||||| ||||||||| ||||  ||||||| ||  |||||||||||||||    
T  48590694 tttttaagttcattcaattaatgatgtatgtgattcatattatggaccacatacatcattaat 48590632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 211
Target Start/End: Original strand, 3149034 - 3149067
Alignment:
Q  178 tttttaagttcattcaattgatgatgtatatgat 211  Q
    ||||||||||||||||||||||||||||||||||    
T  3149034 tttttaagttcattcaattgatgatgtatatgat 3149067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 26904820 - 26904873
Alignment:
Q  186 ttcattcaattgatgatgtatatgatctatattatagattacatacatcattaa 239  Q
    ||||||||||| |||||||||| ||||| |||||||||  ||||||||||||||    
T  26904820 ttcattcaattaatgatgtatacgatctttattatagaccacatacatcattaa 26904873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 240
Target Start/End: Original strand, 47778461 - 47778522
Alignment:
Q  179 ttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    ||||| |||||||||||| || |||||| |||| |||||||| || ||||||||||||||||    
T  47778461 ttttaggttcattcaattaataatgtatgtgatttatattatcgactacatacatcattaat 47778522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 240
Target Start/End: Original strand, 24733140 - 24733208
Alignment:
Q  172 tttaattttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||||||||| |||||||||||| |||||||| ||| |||||| |||| |  ||||| |||||||||    
T  24733140 tttaattttttaggttcattcaattaatgatgtaaatggtctataatataaaccacatatatcattaat 24733208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 188 - 240
Target Start/End: Original strand, 27554538 - 27554590
Alignment:
Q  188 cattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    ||||||||| ||||||||| |||||| ||||||| || |||||||||||||||    
T  27554538 cattcaattaatgatgtatgtgatctttattatatatcacatacatcattaat 27554590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 193 - 240
Target Start/End: Complemental strand, 12171753 - 12171706
Alignment:
Q  193 aattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||| ||||||||||||||| |||||||| | ||||||||||||||||    
T  12171753 aattaatgatgtatatgatccatattataaactacatacatcattaat 12171706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 239
Target Start/End: Complemental strand, 12307928 - 12307865
Alignment:
Q  176 attttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaa 239  Q
    |||||||| ||||||||| || ||||||||| || |  ||||||| ||||||||||||||||||    
T  12307928 attttttaggttcattcatttaatgatgtatgtggttcatattatggattacatacatcattaa 12307865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 237
Target Start/End: Complemental strand, 23797449 - 23797398
Alignment:
Q  186 ttcattcaattgatgatgtatatgatctatattatagattacatacatcatt 237  Q
    ||||||||||| ||||||||| || ||| ||||||||| |||||||||||||    
T  23797449 ttcattcaattaatgatgtatctggtctttattatagactacatacatcatt 23797398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 240
Target Start/End: Complemental strand, 3498403 - 3498341
Alignment:
Q  178 tttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||| |||||||||||| ||||||||| || || |||||||| |  |||||||||||||||    
T  3498403 tttttaggttcattcaattaatgatgtatgtggtccatattataaaccacatacatcattaat 3498341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 220
Target Start/End: Complemental strand, 24211660 - 24211618
Alignment:
Q  178 tttttaagttcattcaattgatgatgtatatgatctatattat 220  Q
    |||||| |||||||||||| ||||||||||||||| |||||||    
T  24211660 tttttaggttcattcaattaatgatgtatatgatccatattat 24211618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 240
Target Start/End: Complemental strand, 27942434 - 27942372
Alignment:
Q  178 tttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    ||||||||||||||||||| ||||||||| || | |||| ||| ||| | |||||||||||||    
T  27942434 tttttaagttcattcaattaatgatgtatgtggtttataatatggatcatatacatcattaat 27942372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 240
Target Start/End: Original strand, 28003209 - 28003271
Alignment:
Q  178 tttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||| ||||||||||||  |||||||| || || |||||||| || |||||||||||||||    
T  28003209 tttttaggttcattcaattattgatgtatgtggtccatattataaatcacatacatcattaat 28003271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 240
Target Start/End: Complemental strand, 30005985 - 30005923
Alignment:
Q  178 tttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||| |||||||||||| ||||||||| ||||  ||||||||||  |||||| ||||||||    
T  30005985 tttttaggttcattcaattaatgatgtatgtgattcatattatagaccacatacgtcattaat 30005923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 240
Target Start/End: Complemental strand, 37066291 - 37066229
Alignment:
Q  178 tttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||| |||||||||||| ||||||||| || || ||| ||||||  |||||||||||||||    
T  37066291 tttttaggttcattcaattaatgatgtatgtggtccataatatagaccacatacatcattaat 37066229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 240
Target Start/End: Original strand, 46221109 - 46221171
Alignment:
Q  178 tttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    ||||||||||||||||||| ||||||||| || | |||| ||| ||  |||||||||||||||    
T  46221109 tttttaagttcattcaattaatgatgtatgtggtttataatatggaccacatacatcattaat 46221171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 240
Target Start/End: Complemental strand, 46477242 - 46477180
Alignment:
Q  178 tttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||| |||||||||||| ||||||||| || || |||||||| |  |||||||||||||||    
T  46477242 tttttaggttcattcaattaatgatgtatgtggtccatattataaaccacatacatcattaat 46477180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 237
Target Start/End: Complemental strand, 46495476 - 46495418
Alignment:
Q  179 ttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcatt 237  Q
    |||||| || ||| |||| ||||||||||| |||| ||||||||| |||||||||||||    
T  46495476 ttttaaatttatttaattaatgatgtatattatctttattatagactacatacatcatt 46495418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 240
Target Start/End: Original strand, 46578296 - 46578358
Alignment:
Q  178 tttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    ||||||| ||||||||||| ||||||||| || | ||||||||  | ||||||||||||||||    
T  46578296 tttttaaattcattcaattaatgatgtatgtggtttatattatgaactacatacatcattaat 46578358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 46658833 - 46658779
Alignment:
Q  186 ttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    ||||||||||| ||||||||| || || |||||||  ||||||||||||||||||    
T  46658833 ttcattcaattaatgatgtatgtgttccatattatgaattacatacatcattaat 46658779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 240
Target Start/End: Complemental strand, 48392975 - 48392913
Alignment:
Q  178 tttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    ||||||||||||||||||| ||||||||| || | ||||||||  || |||||||||| ||||    
T  48392975 tttttaagttcattcaattaatgatgtatgtggtatatattatgaatcacatacatcactaat 48392913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 3342004 - 3341959
Alignment:
Q  172 tttaattttttaagttcattcaattgatgatgtatatgatctatat 217  Q
    |||||||||||||||| |||||||| ||||||||| ||||| ||||    
T  3342004 tttaattttttaagtttattcaattaatgatgtatgtgatccatat 3341959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 239
Target Start/End: Complemental strand, 4027327 - 4027266
Alignment:
Q  178 tttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaa 239  Q
    |||||| ||||||||| || ||||||||||||||  ||| ||||||  ||||||||||||||    
T  4027327 tttttaggttcattcatttaatgatgtatatgattcataatatagacaacatacatcattaa 4027266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 6803481 - 6803444
Alignment:
Q  179 ttttaagttcattcaattgatgatgtatatgatctata 216  Q
    |||||| |||||||||||||||||||||||| ||||||    
T  6803481 ttttaaattcattcaattgatgatgtatatggtctata 6803444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 180 - 237
Target Start/End: Original strand, 31319549 - 31319606
Alignment:
Q  180 tttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcatt 237  Q
    |||| |||||||||||| ||||| ||| || ||| ||||||||| |||||||||||||    
T  31319549 tttaggttcattcaattaatgatatatgtggtctttattatagactacatacatcatt 31319606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 240
Target Start/End: Complemental strand, 1565523 - 1565459
Alignment:
Q  176 attttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||||| |||||||||||| |||| |||| ||||| |||||||  |  |||||||||||||||    
T  1565523 attttttaggttcattcaattaatgaagtatgtgatccatattatgaaccacatacatcattaat 1565459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 4406187 - 4406127
Alignment:
Q  179 ttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaa 239  Q
    ||||||||||||||| || |||||| | ||| ||| |||||||||  ||||||||||||||    
T  4406187 ttttaagttcattcatttaatgatgcacatggtctttattatagaccacatacatcattaa 4406127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 236
Target Start/End: Complemental strand, 7104798 - 7104734
Alignment:
Q  172 tttaattttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcat 236  Q
    |||||| ||||||||||||| |||  ||||||||| || ||||||||| |||  |||||||||||    
T  7104798 tttaatattttaagttcatttaataaatgatgtatgtggtctatattaaagaccacatacatcat 7104734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 233
Target Start/End: Complemental strand, 19197829 - 19197765
Alignment:
Q  169 aattttaattttttaagttcattcaattgatgatgtatatgatctatattatagattacatacat 233  Q
    |||||| ||||| || |||||||||||| | ||||||| || |||||||||||||  ||||||||    
T  19197829 aattttgattttctaggttcattcaattaacgatgtatgtggtctatattatagaccacatacat 19197765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 240
Target Start/End: Original strand, 23092379 - 23092447
Alignment:
Q  172 tttaattttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    ||||| |||||||||||||| |||| || ||||||||| | |||||||| ||   ||||||||||||||    
T  23092379 tttaactttttaagttcatttaattaataatgtatatggtttatattatggaccgcatacatcattaat 23092447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 238
Target Start/End: Original strand, 24166294 - 24166354
Alignment:
Q  178 tttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcatta 238  Q
    ||||||||||||||||||| ||||| ||| || |  ||||||| ||| |||||||||||||    
T  24166294 tttttaagttcattcaattaatgatatatgtggttcatattatggatcacatacatcatta 24166354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 240
Target Start/End: Complemental strand, 27554596 - 27554544
Alignment:
Q  188 cattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    ||||||||| ||||||||| |||| |||| || |||| |||||||||||||||    
T  27554596 cattcaattaatgatgtatgtgatatataataaagatcacatacatcattaat 27554544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 240
Target Start/End: Original strand, 27940774 - 27940838
Alignment:
Q  176 attttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||||| |||||||||||| ||||||||| || |  ||| ||| ||| |||||||||||||||    
T  27940774 attttttaggttcattcaattaatgatgtatgtggttcataatatggatcacatacatcattaat 27940838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 240
Target Start/End: Original strand, 33471519 - 33471583
Alignment:
Q  176 attttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    ||||||||  ||||||||||| ||||||||| || |  ||||||||||  |||||||||||||||    
T  33471519 attttttagattcattcaattaatgatgtatgtggttcatattatagaccacatacatcattaat 33471583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 240
Target Start/End: Complemental strand, 33471601 - 33471537
Alignment:
Q  176 attttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||||| |||||||||||| ||||||||| || |||||| |||  |  |||||||||||||||    
T  33471601 attttttaggttcattcaattaatgatgtatgtggtctataatatgaaccacatacatcattaat 33471537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 206
Target Start/End: Original strand, 39728596 - 39728624
Alignment:
Q  178 tttttaagttcattcaattgatgatgtat 206  Q
    |||||||||||||||||||||||||||||    
T  39728596 tttttaagttcattcaattgatgatgtat 39728624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 240
Target Start/End: Complemental strand, 46221189 - 46221125
Alignment:
Q  176 attttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||||| ||||||| |||| ||||||||| || || |||||||| |  |||||||||||||||    
T  46221189 attttttaggttcatttaattaatgatgtatgtggtccatattataaaccacatacatcattaat 46221125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 9e-17; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 172 - 240
Target Start/End: Original strand, 27990382 - 27990450
Alignment:
Q  172 tttaattttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    ||||||||||||||||| ||||||| ||||||||| || |  |||||||||||||||||||||||||||    
T  27990382 tttaattttttaagttctttcaattaatgatgtatttggttcatattatagattacatacatcattaat 27990450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 169 - 240
Target Start/End: Complemental strand, 12165402 - 12165331
Alignment:
Q  169 aattttaattttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||| |||||||| |||||||||||| |||||||||||||| ||||||||| |  |||||||||||||||    
T  12165402 aattttgattttttaggttcattcaattaatgatgtatatgatttatattatataccacatacatcattaat 12165331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 186 - 237
Target Start/End: Complemental strand, 3100506 - 3100455
Alignment:
Q  186 ttcattcaattgatgatgtatatgatctatattatagattacatacatcatt 237  Q
    ||||||||||| |||||||||||||||| ||||||||| |||||||||||||    
T  3100506 ttcattcaattaatgatgtatatgatctttattatagactacatacatcatt 3100455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 169 - 240
Target Start/End: Original strand, 35907854 - 35907925
Alignment:
Q  169 aattttaattttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||| |||||| | |||||||||||| ||||||||||||||||||||||| ||  | |||||||||||||    
T  35907854 aattttgatttttaaggttcattcaattaatgatgtatatgatctatattatggaccatatacatcattaat 35907925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 240
Target Start/End: Complemental strand, 9005055 - 9004994
Alignment:
Q  179 ttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    ||||| |||||||||||| || |||||| |||| ||||||||||| ||||||||||||||||    
T  9005055 ttttaggttcattcaattaataatgtatgtgatttatattatagactacatacatcattaat 9004994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 178 - 240
Target Start/End: Complemental strand, 11784395 - 11784333
Alignment:
Q  178 tttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    ||||||||||||||||||| ||||||||| |||| ||||||||  | ||||||||| ||||||    
T  11784395 tttttaagttcattcaattaatgatgtatgtgatgtatattatgaactacatacattattaat 11784333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 178 - 240
Target Start/End: Original strand, 15965987 - 15966049
Alignment:
Q  178 tttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||| |||||||||||| ||||||||| || ||||||||||| |  |||||||||||||||    
T  15965987 tttttaggttcattcaattaatgatgtatgtggtctatattataaaccacatacatcattaat 15966049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 178 - 240
Target Start/End: Complemental strand, 21152697 - 21152635
Alignment:
Q  178 tttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||| |||||||||||| ||||||||| || || |||||||| || |||||||||||||||    
T  21152697 tttttaggttcattcaattaatgatgtatgtggtccatattataaatcacatacatcattaat 21152635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 178 - 240
Target Start/End: Complemental strand, 21159832 - 21159770
Alignment:
Q  178 tttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||| |||||||||||| ||||||||| || || |||||||| || |||||||||||||||    
T  21159832 tttttaggttcattcaattaatgatgtatgtggtccatattataaatcacatacatcattaat 21159770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 178 - 240
Target Start/End: Complemental strand, 21163639 - 21163577
Alignment:
Q  178 tttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||| |||||||||||| ||||||||| || || |||||||| || |||||||||||||||    
T  21163639 tttttaggttcattcaattaatgatgtatgtggtccatattataaatcacatacatcattaat 21163577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 178 - 240
Target Start/End: Original strand, 35172461 - 35172523
Alignment:
Q  178 tttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    ||||||||||||||||||| ||||||||| ||| ||||| ||||||  |||||||| ||||||    
T  35172461 tttttaagttcattcaattaatgatgtatgtgacctataatatagaccacatacattattaat 35172523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 240
Target Start/End: Complemental strand, 35907948 - 35907879
Alignment:
Q  171 ttttaattttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||| |||||||| |||||| ||||| |||||||||||| || ||| ||||||| | |||||||||||||    
T  35907948 tttttattttttaggttcatacaattaatgatgtatatggtccataatatagatcatatacatcattaat 35907879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 239
Target Start/End: Original strand, 40905895 - 40905956
Alignment:
Q  178 tttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaa 239  Q
    |||||| ||||||||| || ||||||||| ||||| ||||||| ||| ||||||||||||||    
T  40905895 tttttaggttcattcatttaatgatgtatgtgatccatattatggatcacatacatcattaa 40905956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 240
Target Start/End: Complemental strand, 13420545 - 13420481
Alignment:
Q  176 attttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||||| ||||||| |||| |||||||||||| | |||||||| ||| |||||||| ||||||    
T  13420545 attttttaggttcatttaattaatgatgtatatggtttatattatggatcacatacattattaat 13420481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 240
Target Start/End: Original strand, 14416435 - 14416499
Alignment:
Q  176 attttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    ||||||||  ||||||||||| ||||||||| || || |||||||| || |||||||||||||||    
T  14416435 attttttagattcattcaattaatgatgtatgtggtccatattataaatcacatacatcattaat 14416499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 240
Target Start/End: Original strand, 34147973 - 34148033
Alignment:
Q  180 tttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    ||||||||||||||||| ||||| ||| ||||  ||| ||||||| |||||||||||||||    
T  34147973 tttaagttcattcaattaatgatatatttgattcataatatagatcacatacatcattaat 34148033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 240
Target Start/End: Complemental strand, 36137122 - 36137062
Alignment:
Q  180 tttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||| |||||||||||| ||||||||| |||| || ||||| || ||||||||||||||||    
T  36137122 tttaggttcattcaattaatgatgtatgtgatttaaattatggactacatacatcattaat 36137062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 237
Target Start/End: Complemental strand, 38370481 - 38370437
Alignment:
Q  193 aattgatgatgtatatgatctatattatagattacatacatcatt 237  Q
    |||| |||||||||||||||| ||||||||| |||||||||||||    
T  38370481 aattaatgatgtatatgatctttattatagactacatacatcatt 38370437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 240
Target Start/End: Original strand, 38860829 - 38860893
Alignment:
Q  176 attttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||||| |||||||||||| ||||||||| || |  ||||||||||  |||||||||||||||    
T  38860829 attttttaggttcattcaattaatgatgtatgtggttcatattatagaccacatacatcattaat 38860893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 240
Target Start/End: Original strand, 13157375 - 13157426
Alignment:
Q  189 attcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||||| |||||||||||| ||| ||||||| || |||||||||||||||    
T  13157375 attcaattaatgatgtatatggtctttattatatatcacatacatcattaat 13157426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 240
Target Start/End: Original strand, 15966669 - 15966736
Alignment:
Q  173 ttaattttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||| |||||| |||||||||||| ||||||||| || | |||||||| ||  |||||||||||||||    
T  15966669 ttaactttttaggttcattcaattaatgatgtatgtggtttatattatggaccacatacatcattaat 15966736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 237
Target Start/End: Original strand, 17153462 - 17153513
Alignment:
Q  186 ttcattcaattgatgatgtatatgatctatattatagattacatacatcatt 237  Q
    ||||||||||| ||||||| |||||||| ||||||| || ||||||||||||    
T  17153462 ttcattcaattaatgatgtgtatgatctttattatacatcacatacatcatt 17153513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 232
Target Start/End: Original strand, 71298 - 71344
Alignment:
Q  186 ttcattcaattgatgatgtatatgatctatattatagattacataca 232  Q
    ||||||||||| |||||||||||||||| |||||||||  |||||||    
T  71298 ttcattcaattaatgatgtatatgatctttattatagaccacataca 71344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 221
Target Start/End: Complemental strand, 780766 - 780724
Alignment:
Q  179 ttttaagttcattcaattgatgatgtatatgatctatattata 221  Q
    |||||| ||||||||||| |||||||||||||||| |||||||    
T  780766 ttttaaattcattcaattaatgatgtatatgatctttattata 780724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 240
Target Start/End: Original strand, 7336886 - 7336948
Alignment:
Q  178 tttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||| |||||||||||||| ||||||||| || || |||||||| |  |||||||||||||||    
T  7336886 ttttgaagttcattcaattaatgatgtatgtggtccatattataaaccacatacatcattaat 7336948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 240
Target Start/End: Original strand, 14064841 - 14064903
Alignment:
Q  178 tttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||| |||||||||||| ||||||||| || || |||||||  || |||||||||||||||    
T  14064841 tttttaggttcattcaattaatgatgtatgtggtccatattatgaatcacatacatcattaat 14064903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 240
Target Start/End: Complemental strand, 15966065 - 15966003
Alignment:
Q  178 tttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||| |||||||||||| ||||||||| || | |||| ||||||  |||||||||||||||    
T  15966065 tttttaggttcattcaattaatgatgtatgtggtttataatatagaccacatacatcattaat 15966003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 240
Target Start/End: Original strand, 18942017 - 18942079
Alignment:
Q  178 tttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||| |||||||||||| |||||||||||| |  ||| ||||||  |||||||||||||||    
T  18942017 tttttaggttcattcaattaatgatgtatatggttcataatatagaccacatacatcattaat 18942079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 240
Target Start/End: Original strand, 21152619 - 21152681
Alignment:
Q  178 tttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||| |||||||||||| ||||||||| |||| |||| ||| ||  |||||||||||||||    
T  21152619 tttttaggttcattcaattaatgatgtatgtgatttataatatggaccacatacatcattaat 21152681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 240
Target Start/End: Original strand, 21159754 - 21159816
Alignment:
Q  178 tttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||| |||||||||||| ||||||||| |||| |||| ||| ||  |||||||||||||||    
T  21159754 tttttaggttcattcaattaatgatgtatgtgatttataatatggaccacatacatcattaat 21159816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 240
Target Start/End: Original strand, 21163561 - 21163623
Alignment:
Q  178 tttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||| |||||||||||| ||||||||| |||| |||| ||| ||  |||||||||||||||    
T  21163561 tttttaggttcattcaattaatgatgtatgtgatttataatatggaccacatacatcattaat 21163623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 237
Target Start/End: Complemental strand, 31963615 - 31963569
Alignment:
Q  191 tcaattgatgatgtatatgatctatattatagattacatacatcatt 237  Q
    |||||| |||||||||||| ||| ||||||||| |||||||||||||    
T  31963615 tcaattaatgatgtatatggtctttattatagactacatacatcatt 31963569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 239
Target Start/End: Complemental strand, 33545925 - 33545859
Alignment:
Q  173 ttaattttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaa 239  Q
    |||||||| |||||||||||  || ||||||||| || ||||||||||  | |||||||||||||||    
T  33545925 ttaattttataagttcattcgtttaatgatgtatgtggtctatattatgaactacatacatcattaa 33545859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 206
Target Start/End: Complemental strand, 36329195 - 36329161
Alignment:
Q  172 tttaattttttaagttcattcaattgatgatgtat 206  Q
    ||||||||||||||||||||||||| |||||||||    
T  36329195 tttaattttttaagttcattcaattaatgatgtat 36329161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 240
Target Start/End: Original strand, 37685001 - 37685063
Alignment:
Q  178 tttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    ||||||||||||||||||| ||||||||| || |  ||| |||||| ||||||||| ||||||    
T  37685001 tttttaagttcattcaattaatgatgtatgtggttcataatatagactacatacattattaat 37685063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 239
Target Start/End: Complemental strand, 12891397 - 12891336
Alignment:
Q  178 tttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaa 239  Q
    |||||| ||||||||| || ||||||||| |||||||||||||  |  ||||||||||||||    
T  12891397 tttttaggttcattcatttaatgatgtatgtgatctatattatgaaccacatacatcattaa 12891336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 239
Target Start/End: Original strand, 31691004 - 31691065
Alignment:
Q  178 tttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaa 239  Q
    |||||||||||||||| || |||||||||||| |  ||||||||||  | ||||||||||||    
T  31691004 tttttaagttcattcatttaatgatgtatatggttcatattatagaccagatacatcattaa 31691065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 187 - 240
Target Start/End: Complemental strand, 35172530 - 35172477
Alignment:
Q  187 tcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||||||| || |||||| || |||||||||||| | |||||||||||||||    
T  35172530 tcattcaattaataatgtatgtggtctatattataggtcacatacatcattaat 35172477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 237
Target Start/End: Original strand, 10495233 - 10495301
Alignment:
Q  169 aattttaattttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcatt 237  Q
    |||||| ||||||||  ||||||||||  ||||||||| || | |||||||||||| |||| |||||||    
T  10495233 aattttgattttttagattcattcaataaatgatgtatgtggtttatattatagatcacattcatcatt 10495301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 240
Target Start/End: Original strand, 13311215 - 13311267
Alignment:
Q  188 cattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    ||||||||| ||||||||| || ||| |||||||  |||||||||||||||||    
T  13311215 cattcaattaatgatgtatgtggtctttattatatgttacatacatcattaat 13311267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 239
Target Start/End: Original strand, 14274166 - 14274226
Alignment:
Q  179 ttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaa 239  Q
    |||||| |||||||| || ||||||||| || || |||||||| | |||||||||||||||    
T  14274166 ttttaaattcattcatttaatgatgtatgtggtccatattataaactacatacatcattaa 14274226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 220
Target Start/End: Complemental strand, 18942097 - 18942053
Alignment:
Q  176 attttttaagttcattcaattgatgatgtatatgatctatattat 220  Q
    |||||||| |||||||||||| ||||||||| || ||||||||||    
T  18942097 attttttaggttcattcaattaatgatgtatgtggtctatattat 18942053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 220
Target Start/End: Complemental strand, 34148051 - 34148007
Alignment:
Q  176 attttttaagttcattcaattgatgatgtatatgatctatattat 220  Q
    |||||||| ||||||| |||| ||||||||| |||||||||||||    
T  34148051 attttttaggttcatttaattaatgatgtatgtgatctatattat 34148007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 240
Target Start/End: Original strand, 37637298 - 37637362
Alignment:
Q  176 attttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    ||||||||||||||||||||| ||||||||| |||   ||| |||| | ||||||||| ||||||    
T  37637298 attttttaagttcattcaattaatgatgtatgtgactcataatataaactacatacattattaat 37637362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 240
Target Start/End: Original strand, 37944643 - 37944695
Alignment:
Q  188 cattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    ||||||||| ||||||||| |||||| |||||||  | |||||||||||||||    
T  37944643 cattcaattaatgatgtatgtgatctttattatatgtcacatacatcattaat 37944695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 179 - 240
Target Start/End: Original strand, 21003972 - 21004033
Alignment:
Q  179 ttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||||||||||||||| |||||||||||| |||| ||||||||  |||||||||||||||    
T  21003972 ttttaagttcattcaattaatgatgtatatggtctacattatagaccacatacatcattaat 21004033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 176 - 239
Target Start/End: Original strand, 15641252 - 15641315
Alignment:
Q  176 attttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaa 239  Q
    |||||||||||||||||| || |||||||||||| ||||||||||  | |||||||||||||||    
T  15641252 attttttaagttcattcatttaatgatgtatatggtctatattatgaactacatacatcattaa 15641315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 178 - 240
Target Start/End: Original strand, 51126136 - 51126198
Alignment:
Q  178 tttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||| |||||||||||| ||||||||| || |||||||||||||  |||||||||||||||    
T  51126136 tttttaggttcattcaattaatgatgtatgtggtctatattatagaccacatacatcattaat 51126198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 189 - 237
Target Start/End: Original strand, 22493618 - 22493666
Alignment:
Q  189 attcaattgatgatgtatatgatctatattatagattacatacatcatt 237  Q
    ||||||||||||||||||||| ||| |||||||||| ||||||||||||    
T  22493618 attcaattgatgatgtatatggtctttattatagatcacatacatcatt 22493666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 186 - 237
Target Start/End: Original strand, 36072609 - 36072660
Alignment:
Q  186 ttcattcaattgatgatgtatatgatctatattatagattacatacatcatt 237  Q
    ||||||||||| |||||||||||| ||| ||||||||| |||||||||||||    
T  36072609 ttcattcaatttatgatgtatatggtctttattatagactacatacatcatt 36072660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 179 - 237
Target Start/End: Original strand, 5816571 - 5816629
Alignment:
Q  179 ttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcatt 237  Q
    |||||| |||||| |||| |||||||||||||||| |||||||||| ||||| ||||||    
T  5816571 ttttaaattcatttaattaatgatgtatatgatctttattatagatcacatatatcatt 5816629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 178 - 240
Target Start/End: Original strand, 42013177 - 42013239
Alignment:
Q  178 tttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    ||||||| ||||||||||| ||||||||| || ||||||||||| |  |||||||||||||||    
T  42013177 tttttaaattcattcaattaatgatgtatgtggtctatattataaaccacatacatcattaat 42013239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 178 - 240
Target Start/End: Complemental strand, 44551307 - 44551245
Alignment:
Q  178 tttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||||||| |||||||| |||||||||||||| |||||||| ||  | |||||||||||||    
T  44551307 tttttaagtttattcaattaatgatgtatatgatttatattatggaccatatacatcattaat 44551245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 178 - 240
Target Start/End: Complemental strand, 51126214 - 51126152
Alignment:
Q  178 tttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||| |||||||||||| ||||||||| || |||||| ||||||  |||||||||||||||    
T  51126214 tttttaggttcattcaattaatgatgtatgtggtctataatatagaccacatacatcattaat 51126152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 237
Target Start/End: Original strand, 9992631 - 9992692
Alignment:
Q  176 attttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcatt 237  Q
    |||| ||| |||||||||||  ||||||||||||||| |||||||||| || ||||||||||    
T  9992631 atttattaggttcattcaataaatgatgtatatgatcaatattatagactatatacatcatt 9992692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 240
Target Start/End: Complemental strand, 20542911 - 20542850
Alignment:
Q  179 ttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||||||||||||||| ||||||||| || |||||||||||    |||||||||||||||    
T  20542911 ttttaagttcattcaattaatgatgtatgtggtctatattataacccacatacatcattaat 20542850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 240
Target Start/End: Original strand, 33118222 - 33118291
Alignment:
Q  171 ttttaattttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||| ||||||||| |||||| ||   ||||||||| ||||||||||||||||  |||||||||||||||    
T  33118222 ttttcattttttaaattcatttaacaaatgatgtatgtgatctatattatagaccacatacatcattaat 33118291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 240
Target Start/End: Complemental strand, 40952647 - 40952586
Alignment:
Q  179 ttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||||||||||||||| || |||||| |  | ||||||||||| ||||||||||||||||    
T  40952647 ttttaagttcattcaattaataatgtatgtagtttatattatagactacatacatcattaat 40952586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 189 - 237
Target Start/End: Complemental strand, 10572819 - 10572771
Alignment:
Q  189 attcaattgatgatgtatatgatctatattatagattacatacatcatt 237  Q
    |||||||| |||||||||||||||| |||||||||  ||||||||||||    
T  10572819 attcaattaatgatgtatatgatctttattatagaccacatacatcatt 10572771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 189 - 237
Target Start/End: Original strand, 48603606 - 48603654
Alignment:
Q  189 attcaattgatgatgtatatgatctatattatagattacatacatcatt 237  Q
    |||||||| |||||| ||||||||| |||||||||| ||||||||||||    
T  48603606 attcaattaatgatgcatatgatctttattatagatcacatacatcatt 48603654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 237
Target Start/End: Original strand, 3511748 - 3511799
Alignment:
Q  186 ttcattcaattgatgatgtatatgatctatattatagattacatacatcatt 237  Q
    ||||||||||| |||||||||||||||| |||||||||  |||| |||||||    
T  3511748 ttcattcaattaatgatgtatatgatctttattatagaccacattcatcatt 3511799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 237
Target Start/End: Original strand, 4484113 - 4484164
Alignment:
Q  186 ttcattcaattgatgatgtatatgatctatattatagattacatacatcatt 237  Q
    ||||||||||| |||||||||||| ||| |||||||||  ||||||||||||    
T  4484113 ttcattcaattaatgatgtatatggtctttattatagaccacatacatcatt 4484164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 179 - 230
Target Start/End: Complemental strand, 7740598 - 7740547
Alignment:
Q  179 ttttaagttcattcaattgatgatgtatatgatctatattatagattacata 230  Q
    |||||| |||||| |||| ||||||||| |||||| ||||||||||||||||    
T  7740598 ttttaaattcattaaattaatgatgtatgtgatctttattatagattacata 7740547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 237
Target Start/End: Original strand, 16170949 - 16171000
Alignment:
Q  186 ttcattcaattgatgatgtatatgatctatattatagattacatacatcatt 237  Q
    ||||||||||| ||| |||||||| ||| ||||||||| |||||||||||||    
T  16170949 ttcattcaattaatggtgtatatggtctttattatagactacatacatcatt 16171000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 237
Target Start/End: Original strand, 18423931 - 18423982
Alignment:
Q  186 ttcattcaattgatgatgtatatgatctatattatagattacatacatcatt 237  Q
    ||||||||||| |||||||||||||||| ||||||| || | ||||||||||    
T  18423931 ttcattcaattaatgatgtatatgatctttattataaatcatatacatcatt 18423982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 237
Target Start/End: Original strand, 18488559 - 18488610
Alignment:
Q  186 ttcattcaattgatgatgtatatgatctatattatagattacatacatcatt 237  Q
    ||||||||||  ||||||||| |||||||||||| |||| ||||||||||||    
T  18488559 ttcattcaataaatgatgtatgtgatctatattaaagatcacatacatcatt 18488610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 237
Target Start/End: Complemental strand, 33118307 - 33118248
Alignment:
Q  178 tttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcatt 237  Q
    |||||| ||||| |||||| ||||||||| || |||||| ||||||| ||||||||||||    
T  33118307 tttttaggttcaatcaattaatgatgtatgtggtctataatatagatcacatacatcatt 33118248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 237
Target Start/End: Complemental strand, 40881528 - 40881477
Alignment:
Q  186 ttcattcaattgatgatgtatatgatctatattatagattacatacatcatt 237  Q
    ||||||||||| |||||||||||||||| |||||||  | ||||||||||||    
T  40881528 ttcattcaattaatgatgtatatgatctttattatatgtcacatacatcatt 40881477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 233
Target Start/End: Complemental strand, 50686106 - 50686059
Alignment:
Q  186 ttcattcaattgatgatgtatatgatctatattatagattacatacat 233  Q
    ||||||||||| | |||||||||||||| |||||||||| ||||||||    
T  50686106 ttcattcaattaacgatgtatatgatctttattatagatcacatacat 50686059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 237
Target Start/End: Complemental strand, 4708644 - 4708586
Alignment:
Q  179 ttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcatt 237  Q
    |||||| |||||| |||| || ||||||||||||| |||||||||  ||||||||||||    
T  4708644 ttttaaattcatttaattaataatgtatatgatctttattatagaccacatacatcatt 4708586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 239
Target Start/End: Original strand, 6974975 - 6975025
Alignment:
Q  189 attcaattgatgatgtatatgatctatattatagattacatacatcattaa 239  Q
    ||||| || ||||||||| |||||| ||||||||| |||||||||||||||    
T  6974975 attcatttaatgatgtatttgatctttattatagactacatacatcattaa 6975025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 240
Target Start/End: Complemental strand, 17028342 - 17028280
Alignment:
Q  178 tttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||| |||||||||||| ||||||||| || || |||||||| | |||||| |||||||||    
T  17028342 tttttaggttcattcaattaatgatgtatgtggtccatattataaactacatatatcattaat 17028280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 24275256 - 24275310
Alignment:
Q  186 ttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    ||||||||||| || ||||||||| |||| ||||||||  |||||||||||||||    
T  24275256 ttcattcaattaattatgtatatggtctacattatagaccacatacatcattaat 24275310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 240
Target Start/End: Original strand, 24529604 - 24529666
Alignment:
Q  178 tttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||| |||||||||||| ||||||||| || |  ||||||||||  |||||||||||||||    
T  24529604 tttttaggttcattcaattaatgatgtatgtggttcatattatagaccacatacatcattaat 24529666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 240
Target Start/End: Original strand, 53403022 - 53403084
Alignment:
Q  178 tttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||| |||||||||||| ||||||||| || | |||||||| ||| || ||||||||||||    
T  53403022 tttttatgttcattcaattaatgatgtatgtggtttatattatggatcacgtacatcattaat 53403084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 240
Target Start/End: Complemental strand, 32112422 - 32112361
Alignment:
Q  179 ttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||||||||||||||| ||||||||| || || |||||||  |  |||||||||||||||    
T  32112422 ttttaagttcattcaattaatgatgtatgtggtccatattatgaaccacatacatcattaat 32112361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 223
Target Start/End: Complemental strand, 33150649 - 33150600
Alignment:
Q  174 taattttttaagttcattcaattgatgatgtatatgatctatattataga 223  Q
    |||||||||||||| ||||| |  ||||||||| ||||||||||||||||    
T  33150649 taattttttaagtttattcattaaatgatgtatttgatctatattataga 33150600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 239
Target Start/End: Complemental strand, 42911724 - 42911663
Alignment:
Q  178 tttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaa 239  Q
    |||||| ||||||||| || |||||||||||| | ||||||||| |  ||||||||||||||    
T  42911724 tttttaggttcattcatttaatgatgtatatggtgtatattataaaccacatacatcattaa 42911663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 238
Target Start/End: Complemental strand, 54569470 - 54569405
Alignment:
Q  173 ttaattttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcatta 238  Q
    ||||||||||| |||||||||||| ||||||||| || |  ||||||| || ||||| ||||||||    
T  54569470 ttaattttttaggttcattcaattaatgatgtatgtggttcatattatggactacatgcatcatta 54569405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 239
Target Start/End: Complemental strand, 55229657 - 55229596
Alignment:
Q  178 tttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaa 239  Q
    |||||| |||||||||  ||||||||||| |||||||||||||  |  ||||||||||||||    
T  55229657 tttttaggttcattcatctgatgatgtatgtgatctatattatgaaccacatacatcattaa 55229596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 239
Target Start/End: Original strand, 4044330 - 4044390
Alignment:
Q  179 ttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaa 239  Q
    ||||||||||||||| || |||||| | ||| ||| |||||||||  ||||||||||||||    
T  4044330 ttttaagttcattcatttaatgatgcacatggtctttattatagaccacatacatcattaa 4044390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 233
Target Start/End: Complemental strand, 23004056 - 23004016
Alignment:
Q  193 aattgatgatgtatatgatctatattatagattacatacat 233  Q
    |||| |||||||||||||||| ||||||||| |||||||||    
T  23004056 aattaatgatgtatatgatctttattatagactacatacat 23004016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 237
Target Start/End: Complemental strand, 25700567 - 25700507
Alignment:
Q  177 ttttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcatt 237  Q
    |||||||  ||||||||||  ||||||||| || |||||||| ||||| ||||||||||||    
T  25700567 ttttttagattcattcaataaatgatgtatgtggtctatattgtagatcacatacatcatt 25700507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 226
Target Start/End: Complemental strand, 35151762 - 35151722
Alignment:
Q  186 ttcattcaattgatgatgtatatgatctatattatagatta 226  Q
    |||||||||||||||||||||||  ||| ||||||||||||    
T  35151762 ttcattcaattgatgatgtatatagtctttattatagatta 35151722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 237
Target Start/End: Original strand, 38949708 - 38949772
Alignment:
Q  173 ttaattttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcatt 237  Q
    ||||| |||||| || |||||||  |||||||| |||| ||||| |||||| |||||||||||||    
T  38949708 ttaatattttaaattaattcaataaatgatgtaaatgaactataatatagactacatacatcatt 38949772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 240
Target Start/End: Complemental strand, 39754210 - 39754146
Alignment:
Q  176 attttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||||| ||||||| |||| |||||| || || |  |||||||||| ||||||||||||||||    
T  39754210 attttttaggttcatttaattaatgatgcatctggttcatattatagactacatacatcattaat 39754146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 240
Target Start/End: Complemental strand, 41789032 - 41788968
Alignment:
Q  176 attttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||||||||| |||||||| ||||||||| || |  ||||||| ||  |||||||||||||||    
T  41789032 attttttaagtttattcaattaatgatgtatgtggttcatattatggaccacatacatcattaat 41788968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 240
Target Start/End: Original strand, 49745492 - 49745556
Alignment:
Q  176 attttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||||| |||||||||||| ||||||||| || | |||| ||| ||  |||||||||||||||    
T  49745492 attttttatgttcattcaattaatgatgtatgtggtttataatatggaccacatacatcattaat 49745556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 172 - 229
Target Start/End: Original strand, 5762526 - 5762583
Alignment:
Q  172 tttaattttttaagttcattcaattgatgatgtatatgatctatattatagattacat 229  Q
    ||||| ||||||| ||||||||||| |||||||||||||||| |||||||||||||||    
T  5762526 tttaaatttttaaattcattcaattaatgatgtatatgatctttattatagattacat 5762583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 169 - 233
Target Start/End: Complemental strand, 35024456 - 35024392
Alignment:
Q  169 aattttaattttttaagttcattcaattgatgatgtatatgatctatattatagattacatacat 233  Q
    |||||| |||||||||||||||||| || ||||||||||| ||||||||||||||  ||||||||    
T  35024456 aattttgattttttaagttcattcagttaatgatgtatataatctatattatagaccacatacat 35024392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 178 - 240
Target Start/End: Complemental strand, 10041651 - 10041589
Alignment:
Q  178 tttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    ||||||||||||||||||| ||||||||| || ||||||||||| |  |||||||||||||||    
T  10041651 tttttaagttcattcaattaatgatgtatgtggtctatattataaaccacatacatcattaat 10041589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 240
Target Start/End: Complemental strand, 9071313 - 9071252
Alignment:
Q  179 ttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||||||||||||||| || |||||| || | ||||||||||| ||||||||||||||||    
T  9071313 ttttaagttcattcaattaataatgtatgtggtttatattatagactacatacatcattaat 9071252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 176 - 240
Target Start/End: Complemental strand, 921927 - 921863
Alignment:
Q  176 attttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    ||||||||||||||||||||| ||||||||| |  || ||| ||||||| |||||||||||||||    
T  921927 attttttaagttcattcaattaatgatgtatctagtccataatatagatcacatacatcattaat 921863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 186 - 237
Target Start/End: Original strand, 23377981 - 23378032
Alignment:
Q  186 ttcattcaattgatgatgtatatgatctatattatagattacatacatcatt 237  Q
    ||||||||||| |||||||||||||||| |||| ||||| ||||||||||||    
T  23377981 ttcattcaattaatgatgtatatgatctttattgtagatcacatacatcatt 23378032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 186 - 237
Target Start/End: Original strand, 32630445 - 32630496
Alignment:
Q  186 ttcattcaattgatgatgtatatgatctatattatagattacatacatcatt 237  Q
    ||||||||||| |||||||||||| ||| ||||||||| |||||||||||||    
T  32630445 ttcattcaattaatgatgtatatggtctttattatagactacatacatcatt 32630496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 186 - 237
Target Start/End: Original strand, 37396243 - 37396294
Alignment:
Q  186 ttcattcaattgatgatgtatatgatctatattatagattacatacatcatt 237  Q
    ||||||||||| |||||||||||||| |||||||||||  ||||||||||||    
T  37396243 ttcattcaattaatgatgtatatgatttatattatagaccacatacatcatt 37396294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 239
Target Start/End: Complemental strand, 42263126 - 42263063
Alignment:
Q  176 attttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaa 239  Q
    |||||||||||||||| | || |||||||||||||||||||||||  |  ||||||||||||||    
T  42263126 attttttaagttcatttatttaatgatgtatatgatctatattatgaaccacatacatcattaa 42263063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 921855 - 921909
Alignment:
Q  186 ttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    ||||||||||| ||||||||| ||||||||||||| || || |||||||||||||    
T  921855 ttcattcaattaatgatgtatgtgatctatattatggactagatacatcattaat 921909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 178 - 240
Target Start/End: Original strand, 25668442 - 25668504
Alignment:
Q  178 tttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||| |||||||||||| ||||||||| ||||| |||||||| |  |||||||||||||||    
T  25668442 tttttaggttcattcaattaatgatgtatgtgatccatattataaaccacatacatcattaat 25668504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 178 - 240
Target Start/End: Original strand, 30202515 - 30202577
Alignment:
Q  178 tttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||| |||||||||||  ||||||||| ||||  |||||||||| ||||||||||||||||    
T  30202515 tttttaggttcattcaatcaatgatgtatgtgattcatattatagactacatacatcattaat 30202577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 179 - 237
Target Start/End: Original strand, 33555209 - 33555267
Alignment:
Q  179 ttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcatt 237  Q
    |||||| ||||||||||| |||||||||||| ||| ||| |||||| ||||||||||||    
T  33555209 ttttaaattcattcaattaatgatgtatatgctctttatcatagatcacatacatcatt 33555267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 178 - 240
Target Start/End: Complemental strand, 34466207 - 34466145
Alignment:
Q  178 tttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    ||||||||||||||||||| ||||||||| || |  ||||||| || ||||||||||||||||    
T  34466207 tttttaagttcattcaattaatgatgtatgtggttcatattatggactacatacatcattaat 34466145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 178 - 240
Target Start/End: Original strand, 41823772 - 41823834
Alignment:
Q  178 tttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    ||||||| |||||| |||| ||||||||| |||| |||||||||||  |||||||||||||||    
T  41823772 tttttaaattcatttaattaatgatgtatttgatttatattatagaccacatacatcattaat 41823834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 178 - 240
Target Start/End: Complemental strand, 43514865 - 43514803
Alignment:
Q  178 tttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||| |||||||||||| |||||||||||| ||||||||||  |  |||||||||||||||    
T  43514865 tttttaggttcattcaattaatgatgtatatggtctatattatgaaccacatacatcattaat 43514803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 239
Target Start/End: Complemental strand, 3463259 - 3463198
Alignment:
Q  178 tttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaa 239  Q
    |||||| ||||||||| || ||||||||| ||||| |||||||| || ||||||||||||||    
T  3463259 tttttaggttcattcatttaatgatgtatgtgatccatattataaatcacatacatcattaa 3463198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 10602401 - 10602348
Alignment:
Q  180 tttaagttcattcaattgatgatgtatatgatctatattatagattacatacat 233  Q
    ||||||||||||||||| |||||||||||| ||| |||||||||  ||||||||    
T  10602401 tttaagttcattcaattaatgatgtatatggtctttattatagaccacatacat 10602348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 240
Target Start/End: Original strand, 42955057 - 42955126
Alignment:
Q  171 ttttaattttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||| ||||||||  ||||||||||| || | |||||||||||||||||| ||| | |||||||||||||    
T  42955057 tttttattttttagattcattcaattaattacgtatatgatctatattatggatcatatacatcattaat 42955126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 240
Target Start/End: Complemental strand, 12440741 - 12440677
Alignment:
Q  176 attttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||||||||||||||||||  |||||||  || ||||||||||| || |||||||||| ||||    
T  12440741 attttttaagttcattcaattagtgatgtacgtggtctatattataaatcacatacatcaataat 12440677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 240
Target Start/End: Complemental strand, 17378166 - 17378102
Alignment:
Q  176 attttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    ||||||||||||||||||||| ||||||||| || |  ||||| ||||  |||||||||||||||    
T  17378166 attttttaagttcattcaattaatgatgtatgtggttcatattgtagaccacatacatcattaat 17378102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 240
Target Start/End: Complemental strand, 27327941 - 27327877
Alignment:
Q  176 attttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||||| |||||||||||| ||||||||| ||||  ||||||| ||  |||||||||||||||    
T  27327941 attttttaggttcattcaattaatgatgtatctgattcatattatggaccacatacatcattaat 27327877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 237
Target Start/End: Complemental strand, 36547443 - 36547391
Alignment:
Q  185 gttcattcaattgatgatgtatatgatctatattatagattacatacatcatt 237  Q
    |||||||||||  ||||||||| |||||||||||| |||| ||||||||||||    
T  36547443 gttcattcaataaatgatgtatgtgatctatattaaagatcacatacatcatt 36547391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 4898267 - 4898212
Alignment:
Q  185 gttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||||||||| ||||||||| || || |||||||| || |||||||||||||||    
T  4898267 gttcattcaattaatgatgtatgtggtccatattataaatcacatacatcattaat 4898212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 4945661 - 4945606
Alignment:
Q  185 gttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||||||||| ||||||||| || || |||||||| || |||||||||||||||    
T  4945661 gttcattcaattaatgatgtatgtggtccatattataaatcacatacatcattaat 4945606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 237
Target Start/End: Complemental strand, 26003536 - 26003485
Alignment:
Q  186 ttcattcaattgatgatgtatatgatctatattatagattacatacatcatt 237  Q
    ||||||||||| |||||||||||| ||| ||||||| | |||||||||||||    
T  26003536 ttcattcaattaatgatgtatatggtctttattatatactacatacatcatt 26003485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 239
Target Start/End: Original strand, 32514897 - 32514960
Alignment:
Q  176 attttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaa 239  Q
    |||||||| ||||||||| || ||||||||| ||||||||| || | || ||||||||||||||    
T  32514897 attttttaggttcattcatttaatgatgtatctgatctataatacaaatcacatacatcattaa 32514960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 239
Target Start/End: Original strand, 33618226 - 33618289
Alignment:
Q  176 attttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaa 239  Q
    |||||||| ||||||||| || |||||||||||| |  ||| |||||| |||||||||||||||    
T  33618226 attttttaggttcattcatttaatgatgtatatggttcataatatagactacatacatcattaa 33618289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 240
Target Start/End: Original strand, 4898196 - 4898258
Alignment:
Q  178 tttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||| |||||||||||| ||||||||| |||| |||| ||| ||  |||||||||||||||    
T  4898196 tttttaggttcattcaattaatgatgtatgtgatttataatatggaccacatacatcattaat 4898258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 240
Target Start/End: Original strand, 4945590 - 4945652
Alignment:
Q  178 tttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||| |||||||||||| ||||||||| |||| |||| ||| ||  |||||||||||||||    
T  4945590 tttttaggttcattcaattaatgatgtatgtgatttataatatggaccacatacatcattaat 4945652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 237
Target Start/End: Original strand, 10996278 - 10996336
Alignment:
Q  179 ttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcatt 237  Q
    |||||| |||||| |||| |||||||||||| ||| |||||||||  ||||||||||||    
T  10996278 ttttaaattcattgaattaatgatgtatatggtctttattatagaccacatacatcatt 10996336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 240
Target Start/End: Original strand, 17843982 - 17844044
Alignment:
Q  178 tttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||| |||||||||||| |||||||||||| | |||| ||| ||  |||||||||||||||    
T  17843982 tttttaggttcattcaattaatgatgtatatggtttataatatggaccacatacatcattaat 17844044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 240
Target Start/End: Complemental strand, 17844060 - 17843998
Alignment:
Q  178 tttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    ||||||||||||||||||| ||||||||| || || |||||||| |  | |||||||||||||    
T  17844060 tttttaagttcattcaattaatgatgtatgtggtccatattataaaccatatacatcattaat 17843998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 240
Target Start/End: Complemental strand, 20195398 - 20195336
Alignment:
Q  178 tttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||| |||||||||||| ||||||||| || || |||||||  || |||||||||||||||    
T  20195398 tttttaggttcattcaattaatgatgtatgtggtccatattatgaatcacatacatcattaat 20195336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 239
Target Start/End: Complemental strand, 32514982 - 32514916
Alignment:
Q  173 ttaattttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaa 239  Q
    ||||||||||||||| ||| | || ||||||||| |||| | |||||||||| | ||||||||||||    
T  32514982 ttaattttttaagtttatttatttaatgatgtatgtgatttgtattatagatcagatacatcattaa 32514916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 240
Target Start/End: Complemental strand, 41823854 - 41823788
Alignment:
Q  174 taattttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||||||| ||||||| |||| ||||||||| || |||||| |||| || | |||||||||||||    
T  41823854 taattttttaggttcatttaattaatgatgtatgtggtctataatataaatcaaatacatcattaat 41823788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 239
Target Start/End: Original strand, 7354801 - 7354862
Alignment:
Q  178 tttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaa 239  Q
    |||||||||||||||| || | |||||||||| ||||||||||  || |||||||| |||||    
T  7354801 tttttaagttcattcatttaacgatgtatatggtctatattatgaatcacatacattattaa 7354862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 240
Target Start/End: Complemental strand, 10099660 - 10099599
Alignment:
Q  179 ttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    ||||| |||||||||||| ||||| ||| || ||||||||||| |  |||||||||||||||    
T  10099660 ttttaggttcattcaattaatgatatatgtggtctatattataaaccacatacatcattaat 10099599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 15916831 - 15916787
Alignment:
Q  189 attcaattgatgatgtatatgatctatattatagattacatacat 233  Q
    |||||||| |||||||||||||||| | ||||||| |||||||||    
T  15916831 attcaattaatgatgtatatgatctttgttatagactacatacat 15916787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 240
Target Start/End: Complemental strand, 29573925 - 29573861
Alignment:
Q  176 attttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||||| ||||||| |||| ||||||||| || | |||||||| || || |||||||||||||    
T  29573925 attttttaggttcatttaattaatgatgtatgtggtttatattatggactatatacatcattaat 29573861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 220
Target Start/End: Original strand, 31596822 - 31596870
Alignment:
Q  172 tttaattttttaagttcattcaattgatgatgtatatgatctatattat 220  Q
    ||||||||||||  ||||||||||| ||||||||| ||||| |||||||    
T  31596822 tttaattttttatattcattcaattaatgatgtatgtgatccatattat 31596870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 240
Target Start/End: Original strand, 32070490 - 32070554
Alignment:
Q  176 attttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||||| |||||||||||| ||||||||| || |  ||||||| ||  |||||||||||||||    
T  32070490 attttttaggttcattcaattaatgatgtatgtggttcatattatggaccacatacatcattaat 32070554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 237
Target Start/End: Original strand, 37195078 - 37195142
Alignment:
Q  173 ttaattttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcatt 237  Q
    ||||| |||||  |||| |||||| |||||||||||| ||| |||||||||  ||||||||||||    
T  37195078 ttaatattttagattcactcaattaatgatgtatatggtctttattatagaccacatacatcatt 37195142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 237
Target Start/End: Original strand, 40204479 - 40204533
Alignment:
Q  186 ttcattcaattgatgatgtatatgat---ctatattatagattacatacatcatt 237  Q
    ||||||||||| ||||||||||||||   || |||||||||| ||||||||||||    
T  40204479 ttcattcaattaatgatgtatatgatgatctttattatagatcacatacatcatt 40204533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 217
Target Start/End: Original strand, 43893147 - 43893187
Alignment:
Q  177 ttttttaagttcattcaattgatgatgtatatgatctatat 217  Q
    |||| ||||||||||||||  ||||||||||||||||||||    
T  43893147 ttttctaagttcattcaataaatgatgtatatgatctatat 43893187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 169 - 240
Target Start/End: Complemental strand, 51165917 - 51165846
Alignment:
Q  169 aattttaattttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||| ||||||||| | ||||||||| || || ||||||||||||||||||||  |||||||||||||||    
T  51165917 aattttgattttttaaatgcattcaattaataatttatatgatctatattatagaccacatacatcattaat 51165846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 189 - 240
Target Start/End: Complemental strand, 4182029 - 4181978
Alignment:
Q  189 attcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||||  ||||||||||||||||||||||||||  |||||||||||||||    
T  4182029 attcaatcaatgatgtatatgatctatattatagaccacatacatcattaat 4181978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 220
Target Start/End: Original strand, 19843940 - 19843991
Alignment:
Q  169 aattttaattttttaagttcattcaattgatgatgtatatgatctatattat 220  Q
    |||||||||||||||| ||||||||||| ||||||||| ||| |||||||||    
T  19843940 aattttaattttttaaattcattcaattaatgatgtatctgacctatattat 19843991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 240
Target Start/End: Complemental strand, 44414083 - 44414020
Alignment:
Q  177 ttttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    ||||||| ||||||| |||| ||||||||| |||| |||||| | |||||||||||||||||||    
T  44414083 ttttttaggttcattaaattaatgatgtatgtgatttatattttggattacatacatcattaat 44414020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 186 - 237
Target Start/End: Original strand, 52215919 - 52215970
Alignment:
Q  186 ttcattcaattgatgatgtatatgatctatattatagattacatacatcatt 237  Q
    ||||| |||||||||||||||||||||| |||||||||  ||||||||||||    
T  52215919 ttcatgcaattgatgatgtatatgatctttattatagaccacatacatcatt 52215970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 178 - 240
Target Start/End: Complemental strand, 7933627 - 7933565
Alignment:
Q  178 tttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||| ||||||||||||  |||||||| ||||| |||||||| || |||||||||||||||    
T  7933627 tttttaggttcattcaattattgatgtatgtgatccatattataaatgacatacatcattaat 7933565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 178 - 240
Target Start/End: Original strand, 39530426 - 39530488
Alignment:
Q  178 tttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    ||||||||||||||||||| ||||||||| || |  ||||||||||  |||||||||||||||    
T  39530426 tttttaagttcattcaattaatgatgtatgtggttcatattatagaccacatacatcattaat 39530488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 178 - 240
Target Start/End: Complemental strand, 40504175 - 40504113
Alignment:
Q  178 tttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||| |||||||||||| || |||||| |||| |||||||| ||| |||||||||||||||    
T  40504175 tttttatgttcattcaattaataatgtatgtgatttatattatggatcacatacatcattaat 40504113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 179 - 237
Target Start/End: Complemental strand, 45736795 - 45736737
Alignment:
Q  179 ttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcatt 237  Q
    |||||| ||||||||||| |||||||| ||||||| |||||||||  ||||||||||||    
T  45736795 ttttaaattcattcaattaatgatgtacatgatctttattatagaccacatacatcatt 45736737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 179 - 237
Target Start/End: Original strand, 47334674 - 47334732
Alignment:
Q  179 ttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcatt 237  Q
    |||||| ||||||||||| |||||||||||||| | |||||||||| | ||||||||||    
T  47334674 ttttaaattcattcaattaatgatgtatatgatttttattatagatcatatacatcatt 47334732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 240
Target Start/End: Complemental strand, 1044031 - 1043970
Alignment:
Q  179 ttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    ||||| ||||||| |||| ||||||||| ||||||||||||||   ||||||||||||||||    
T  1044031 ttttaggttcatttaattaatgatgtatgtgatctatattataagctacatacatcattaat 1043970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 26104882 - 26104822
Alignment:
Q  179 ttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaa 239  Q
    ||||||||||||||| || |||||| | ||||||| ||||||||| || ||||||||||||    
T  26104882 ttttaagttcattcatttaatgatgcacatgatctttattatagactatatacatcattaa 26104822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 234
Target Start/End: Original strand, 29389370 - 29389414
Alignment:
Q  190 ttcaattgatgatgtatatgatctatattatagattacatacatc 234  Q
    ||||||| |||||||||||||||| |||||||||| |||||||||    
T  29389370 ttcaattaatgatgtatatgatctttattatagatcacatacatc 29389414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 188 - 240
Target Start/End: Original strand, 33412506 - 33412558
Alignment:
Q  188 cattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    ||||||||| ||||||||| ||||||| ||| ||||| |||||||||||||||    
T  33412506 cattcaattaatgatgtatgtgatctaaattttagatcacatacatcattaat 33412558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 239
Target Start/End: Original strand, 1927530 - 1927593
Alignment:
Q  176 attttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaa 239  Q
    |||||||||||||||||| || ||||||||| || || |||||||  || ||||||||||||||    
T  1927530 attttttaagttcattcatttaatgatgtatgtggtccatattatgaatcacatacatcattaa 1927593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 237
Target Start/End: Complemental strand, 10872773 - 10872722
Alignment:
Q  186 ttcattcaattgatgatgtatatgatctatattatagattacatacatcatt 237  Q
    ||||||||||| |||||||||||| ||| ||||||| || ||||||||||||    
T  10872773 ttcattcaattaatgatgtatatggtctttattataaatcacatacatcatt 10872722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 237
Target Start/End: Original strand, 12744940 - 12744991
Alignment:
Q  186 ttcattcaattgatgatgtatatgatctatattatagattacatacatcatt 237  Q
    ||||||||||| |||||||||||| ||| |||||||||  ||||||||||||    
T  12744940 ttcattcaattaatgatgtatatggtctttattatagaccacatacatcatt 12744991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 240
Target Start/End: Original strand, 17004987 - 17005053
Alignment:
Q  176 attttttaagttcattcaattgatgatgtatatgatc--tatattatagattacatacatcattaat 240  Q
    |||||||| |||||||||||| ||||||||| || ||  |||||||||||  |||||||||||||||    
T  17004987 attttttaggttcattcaattaatgatgtatgtggtccatatattatagaccacatacatcattaat 17005053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 237
Target Start/End: Original strand, 26121578 - 26121629
Alignment:
Q  186 ttcattcaattgatgatgtatatgatctatattatagattacatacatcatt 237  Q
    ||||||||||| |||||||||||| ||| |||||||||  ||||||||||||    
T  26121578 ttcattcaattaatgatgtatatggtctttattatagaccacatacatcatt 26121629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 237
Target Start/End: Original strand, 26244419 - 26244470
Alignment:
Q  186 ttcattcaattgatgatgtatatgatctatattatagattacatacatcatt 237  Q
    ||||||||||| |||||||||||| ||| |||||||||  ||||||||||||    
T  26244419 ttcattcaattaatgatgtatatggtctttattatagaccacatacatcatt 26244470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 237
Target Start/End: Complemental strand, 36571483 - 36571425
Alignment:
Q  178 tttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcatt 237  Q
    |||||||||||||||| |  |||||||||||||| |||| |||||| |||||||||||||    
T  36571483 tttttaagttcattcattaaatgatgtatatgatttata-tatagactacatacatcatt 36571425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 233
Target Start/End: Original strand, 37897721 - 37897768
Alignment:
Q  186 ttcattcaattgatgatgtatatgatctatattatagattacatacat 233  Q
    ||||||||||| |||||||||||||||| |||||||||  ||||||||    
T  37897721 ttcattcaattaatgatgtatatgatctttattatagaccacatacat 37897768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 237
Target Start/End: Complemental strand, 40065422 - 40065371
Alignment:
Q  186 ttcattcaattgatgatgtatatgatctatattatagattacatacatcatt 237  Q
    ||||||||||| |||||||||||| ||| ||||||| | |||||||||||||    
T  40065422 ttcattcaattaatgatgtatatggtctttattatatactacatacatcatt 40065371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 240
Target Start/End: Original strand, 16127779 - 16127841
Alignment:
Q  178 tttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||| |||||||||||| ||||||||| || || |||||||| |  |||||||||||||||    
T  16127779 tttttaggttcattcaattaatgatgtatgtggtccatattataaaccacatacatcattaat 16127841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 240
Target Start/End: Original strand, 21659169 - 21659231
Alignment:
Q  178 tttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    ||||||||||||||||||| ||||||||| ||||  ||| ||||||  ||||| |||||||||    
T  21659169 tttttaagttcattcaattaatgatgtatgtgattcataatatagaccacatatatcattaat 21659231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 240
Target Start/End: Complemental strand, 21659247 - 21659185
Alignment:
Q  178 tttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||| |||||||||||| ||||| ||| || ||||||||||  || |||||||||||||||    
T  21659247 tttttaggttcattcaattaatgatatatgtggtctatattatgaatcacatacatcattaat 21659185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 237
Target Start/End: Complemental strand, 29222911 - 29222853
Alignment:
Q  179 ttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcatt 237  Q
    |||||| || |||||||| || ||||||||||||| |||||||||  ||||||||||||    
T  29222911 ttttaaatttattcaattaataatgtatatgatctttattatagacaacatacatcatt 29222853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 240
Target Start/End: Original strand, 46739338 - 46739400
Alignment:
Q  178 tttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||| |||||||||||| |||||||||||| |  ||| ||||||| |||||||| ||||||    
T  46739338 tttttaggttcattcaattaatgatgtatatggttcataatatagatcacatacattattaat 46739400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 220
Target Start/End: Complemental strand, 46739416 - 46739374
Alignment:
Q  178 tttttaagttcattcaattgatgatgtatatgatctatattat 220  Q
    ||||||||||||||||||| || |||||| |||||||||||||    
T  46739416 tttttaagttcattcaattaataatgtatgtgatctatattat 46739374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 206
Target Start/End: Complemental strand, 10344441 - 10344404
Alignment:
Q  169 aattttaattttttaagttcattcaattgatgatgtat 206  Q
    |||||| ||||||||||||||||||||| |||||||||    
T  10344441 aattttgattttttaagttcattcaattaatgatgtat 10344404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 240
Target Start/End: Original strand, 38446771 - 38446832
Alignment:
Q  179 ttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    ||||||||||||||| || |||||||||||| || |||||||  |  |||||||||||||||    
T  38446771 ttttaagttcattcatttaatgatgtatatggtccatattatgaaccacatacatcattaat 38446832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 240
Target Start/End: Original strand, 52638065 - 52638126
Alignment:
Q  179 ttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    ||||| |||||||||||| || |||||| |||| |||||||| ||  |||||||||||||||    
T  52638065 ttttaggttcattcaattaataatgtatgtgatttatattatcgaccacatacatcattaat 52638126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 240
Target Start/End: Original strand, 5326774 - 5326837
Alignment:
Q  176 attttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||||| |||||||||||  ||||||||| ||||  |||||||  ||||||||||||||||||    
T  5326774 attttttaggttcattcaata-atgatgtatgtgattcatattatgaattacatacatcattaat 5326837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 240
Target Start/End: Original strand, 13083900 - 13083964
Alignment:
Q  176 attttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||||| |||||||||||| ||||||||| |  |  ||||||| ||| |||||||||||||||    
T  13083900 attttttaggttcattcaattaatgatgtatgttgttcatattatggatcacatacatcattaat 13083964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 240
Target Start/End: Original strand, 23783325 - 23783393
Alignment:
Q  172 tttaattttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    ||||||| ||||| ||||||||||| |||||||||||| || ||| |||  |  |||||||||||||||    
T  23783325 tttaattgtttaaattcattcaattaatgatgtatatggtccataatatgaaccacatacatcattaat 23783393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 240
Target Start/End: Complemental strand, 33412564 - 33412512
Alignment:
Q  188 cattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    ||||||||| ||||||||| ||||||| | | ||||| |||||||||||||||    
T  33412564 cattcaattaatgatgtatgtgatctaaaatttagatcacatacatcattaat 33412512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 39289583 - 39289635
Alignment:
Q  169 aattttaattttttaagttcattcaattgatgatgtatatgatctatattata 221  Q
    |||||||  ||||||||||||||||||| ||||||||| || || ||||||||    
T  39289583 aattttacctttttaagttcattcaattaatgatgtatgtggtccatattata 39289635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 240
Target Start/End: Original strand, 40504095 - 40504159
Alignment:
Q  176 attttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||| | |||||||||||| ||||||||| ||||| ||| |||| || |||||||| ||||||    
T  40504095 atttttaaggttcattcaattaatgatgtatgtgatccataatataaatcacatacattattaat 40504159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 237
Target Start/End: Complemental strand, 43599192 - 43599148
Alignment:
Q  193 aattgatgatgtatatgatctatattatagattacatacatcatt 237  Q
    |||| ||||||||||| |||| |||||||||| ||||||||||||    
T  43599192 aattaatgatgtatattatctttattatagatcacatacatcatt 43599148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 240
Target Start/End: Complemental strand, 54680600 - 54680536
Alignment:
Q  176 attttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||||| |||||||||||| ||||||||| |  || |||||||  || |||||||||||||||    
T  54680600 attttttaggttcattcaattaatgatgtatgtagtccatattatgaatcacatacatcattaat 54680536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0635 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 178 - 240
Target Start/End: Original strand, 5419 - 5481
Alignment:
Q  178 tttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    ||||||||||||||||||| ||||||||| || ||||||||||| |  |||||||||||||||    
T  5419 tttttaagttcattcaattaatgatgtatgtggtctatattataaaccacatacatcattaat 5481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 179 - 237
Target Start/End: Complemental strand, 89706 - 89648
Alignment:
Q  179 ttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcatt 237  Q
    |||||| || |||||||| |||||||||||||||| |||||||||| ||||||||||||    
T  89706 ttttaaatttattcaattaatgatgtatatgatctttattatagatcacatacatcatt 89648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 179 - 237
Target Start/End: Complemental strand, 11324541 - 11324483
Alignment:
Q  179 ttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcatt 237  Q
    |||||| ||||||||||| |||||||||||| ||| ||||||||| |||||||||||||    
T  11324541 ttttaaattcattcaattaatgatgtatatggtctttattatagactacatacatcatt 11324483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 179 - 237
Target Start/End: Complemental strand, 11482562 - 11482504
Alignment:
Q  179 ttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcatt 237  Q
    |||||| ||||||||||| |||||||||||| ||| ||||||||| |||||||||||||    
T  11482562 ttttaaattcattcaattaatgatgtatatggtctttattatagactacatacatcatt 11482504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 174 - 239
Target Start/End: Original strand, 38847329 - 38847394
Alignment:
Q  174 taattttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaa 239  Q
    |||||||||||||||||||| || ||||||||| || ||||||||||| |  ||||||||||||||    
T  38847329 taattttttaagttcattcatttaatgatgtatgtggtctatattataaaccacatacatcattaa 38847394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 169 - 233
Target Start/End: Complemental strand, 13145850 - 13145786
Alignment:
Q  169 aattttaattttttaagttcattcaattgatgatgtatatgatctatattatagattacatacat 233  Q
    |||||||| ||||||||||||||||||| || |||||| ||||||||||||| | | ||||||||    
T  13145850 aattttaagtttttaagttcattcaattaataatgtatgtgatctatattatggctcacatacat 13145786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 240
Target Start/End: Complemental strand, 6169920 - 6169857
Alignment:
Q  177 ttttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||||||||||||||||| ||||||||| || |  ||||||| || ||||||||||||||||    
T  6169920 ttttttaagttcattcaattaatgatgtatgtggttaatattattgactacatacatcattaat 6169857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 17310440 - 17310487
Alignment:
Q  169 aattttaattttttaagttcattcaattgatgatgtatatgatctata 216  Q
    |||||||| ||||||||||||||||||| |||||||||||| ||||||    
T  17310440 aattttaactttttaagttcattcaattaatgatgtatatggtctata 17310487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 186 - 237
Target Start/End: Complemental strand, 31998290 - 31998239
Alignment:
Q  186 ttcattcaattgatgatgtatatgatctatattatagattacatacatcatt 237  Q
    |||||||| || |||||||||||||||| |||||||||| ||||||||||||    
T  31998290 ttcattcatttaatgatgtatatgatctttattatagatcacatacatcatt 31998239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 186 - 237
Target Start/End: Original strand, 50550158 - 50550209
Alignment:
Q  186 ttcattcaattgatgatgtatatgatctatattatagattacatacatcatt 237  Q
    ||||||||||| || ||||||||||||| |||||||||| ||||||||||||    
T  50550158 ttcattcaattaataatgtatatgatctttattatagatcacatacatcatt 50550209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 178 - 240
Target Start/End: Original strand, 15278596 - 15278658
Alignment:
Q  178 tttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||| ||||||||| || ||||||||| |||||||||||||| |  |||||||||||||||    
T  15278596 tttttaggttcattcatttaatgatgtatgtgatctatattataaaccacatacatcattaat 15278658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 178 - 240
Target Start/End: Original strand, 31909780 - 31909842
Alignment:
Q  178 tttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||| |||||||||||| ||||||||| || ||||||||||| |  |||||||||||||||    
T  31909780 tttttaggttcattcaattaatgatgtatgtggtctatattataaaccacatacatcattaat 31909842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 35050033 - 35049979
Alignment:
Q  186 ttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    ||||||||||| ||||| |||||||| |||| ||||||| |||||||||||||||    
T  35050033 ttcattcaattaatgatatatatgatttataatatagatcacatacatcattaat 35049979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 239
Target Start/End: Complemental strand, 15278674 - 15278613
Alignment:
Q  178 tttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaa 239  Q
    |||||| |||||||||||| ||||||||| || | |||| ||||||| ||||||||||||||    
T  15278674 tttttaggttcattcaattaatgatgtatgtggtttataatatagatcacatacatcattaa 15278613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 239
Target Start/End: Original strand, 15311503 - 15311564
Alignment:
Q  178 tttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaa 239  Q
    |||||||||||||||| || ||||||||| || || |||||||| | |||||||||||||||    
T  15311503 tttttaagttcattcatttaatgatgtatgtggtccatattataaactacatacatcattaa 15311564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 240
Target Start/End: Original strand, 35049964 - 35050025
Alignment:
Q  179 ttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    ||||| |||||||||||| ||||||||| |||||||||||||| || | ||| |||||||||    
T  35049964 ttttaggttcattcaattaatgatgtatgtgatctatattataaatcatatatatcattaat 35050025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 188 - 240
Target Start/End: Complemental strand, 3384322 - 3384270
Alignment:
Q  188 cattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    ||||||||||||||||||| |||||| |||||||  | |||||||||||||||    
T  3384322 cattcaattgatgatgtatgtgatctttattatatgtcacatacatcattaat 3384270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 23575426 - 23575366
Alignment:
Q  179 ttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaa 239  Q
    ||||| ||||||||| || |||||| ||||||||| |||||||||  ||||||||||||||    
T  23575426 ttttaggttcattcatttaatgatgcatatgatctttattatagaccacatacatcattaa 23575366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 28725574 - 28725514
Alignment:
Q  179 ttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaa 239  Q
    ||||| ||||||| | || |||||| | ||||||| |||||||||||||||||||||||||    
T  28725574 ttttaggttcatttatttaatgatgcacatgatctttattatagattacatacatcattaa 28725514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 240
Target Start/End: Complemental strand, 31909860 - 31909796
Alignment:
Q  176 attttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||||| |||||||||||| ||||||||| || | |||| ||||||  |||||||||||||||    
T  31909860 attttttaggttcattcaattaatgatgtatgtggtttataatatagaccacatacatcattaat 31909796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 239
Target Start/End: Original strand, 41161497 - 41161557
Alignment:
Q  179 ttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaa 239  Q
    ||||||||||||||| || |||||| | ||||||| |||||||||  ||||||||||||||    
T  41161497 ttttaagttcattcatttaatgatgcacatgatctttattatagaccacatacatcattaa 41161557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 189 - 237
Target Start/End: Original strand, 50503225 - 50503273
Alignment:
Q  189 attcaattgatgatgtatatgatctatattatagattacatacatcatt 237  Q
    |||||||| |||||||||||||||| |||||||||  ||||||||||||    
T  50503225 attcaattaatgatgtatatgatctttattatagaccacatacatcatt 50503273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 240
Target Start/End: Complemental strand, 17310536 - 17310465
Alignment:
Q  169 aattttaattttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||| ||||| || |||||||||||| ||||| |||||||| | |||||||||  | |||||||||||||    
T  17310536 aattttgattttgtaggttcattcaattaatgatatatatgatttgtattatagaccatatacatcattaat 17310465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 240
Target Start/End: Original strand, 27549067 - 27549138
Alignment:
Q  169 aattttaattttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||| | ||||||||||||||||||| ||||||||| || || |||||||  |  |||||||||||||||    
T  27549067 aatttttactttttaagttcattcaattaatgatgtatgtggtccatattatgaaccacatacatcattaat 27549138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 233
Target Start/End: Complemental strand, 34184543 - 34184488
Alignment:
Q  178 tttttaagttcattcaattgatgatgtatatgatctatattatagattacatacat 233  Q
    ||||||||||||||||||  || |||||| ||||| |||||||||| |||||||||    
T  34184543 tttttaagttcattcaataaattatgtatgtgatccatattatagactacatacat 34184488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 237
Target Start/End: Complemental strand, 34953997 - 34953946
Alignment:
Q  186 ttcattcaattgatgatgtatatgatctatattatagattacatacatcatt 237  Q
    ||||||||||| |||||||||||| ||| |||||||||  ||||||||||||    
T  34953997 ttcattcaattaatgatgtatatggtctttattatagaccacatacatcatt 34953946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 239
Target Start/End: Complemental strand, 38149475 - 38149412
Alignment:
Q  176 attttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaa 239  Q
    |||||||||||||||||| || ||||||||| || || |||||||| | || ||||||||||||    
T  38149475 attttttaagttcattcatttaatgatgtatgtggtccatattataaactatatacatcattaa 38149412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 240
Target Start/End: Complemental strand, 41155026 - 41154955
Alignment:
Q  169 aattttaattttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||| ||||||||| |||||| |||| ||||| |||  |||||||||||| ||||| ||| |||||||||    
T  41155026 aattttgattttttaacttcatttaattaatgatatatgcgatctatattatggattatatatatcattaat 41154955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 237
Target Start/End: Original strand, 42761492 - 42761543
Alignment:
Q  186 ttcattcaattgatgatgtatatgatctatattatagattacatacatcatt 237  Q
    ||||||||||| ||||||||| |||||| ||||||||| || ||||||||||    
T  42761492 ttcattcaattaatgatgtatctgatctttattatagactatatacatcatt 42761543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 237
Target Start/End: Complemental strand, 48636827 - 48636768
Alignment:
Q  178 tttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcatt 237  Q
    |||||| ||||||||| || ||||||||| |||| |||||||||||  ||||||||||||    
T  48636827 tttttaggttcattcagttaatgatgtatttgatttatattatagaccacatacatcatt 48636768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 221
Target Start/End: Complemental strand, 9590852 - 9590810
Alignment:
Q  179 ttttaagttcattcaattgatgatgtatatgatctatattata 221  Q
    |||||| ||||||||||| |||||||||||||||| |||||||    
T  9590852 ttttaaattcattcaattaatgatgtatatgatctttattata 9590810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 233
Target Start/End: Complemental strand, 26674294 - 26674240
Alignment:
Q  179 ttttaagttcattcaattgatgatgtatatgatctatattatagattacatacat 233  Q
    |||||| ||||||||||| |||||||||||| ||| |||||||||  ||||||||    
T  26674294 ttttaaattcattcaattaatgatgtatatggtctttattatagaccacatacat 26674240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 39216204 - 39216150
Alignment:
Q  186 ttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    ||||||||||| |||||||||||  ||| |||||||||  |||||||||||||||    
T  39216204 ttcattcaattaatgatgtatatagtctttattatagacaacatacatcattaat 39216150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 235
Target Start/End: Original strand, 40988404 - 40988450
Alignment:
Q  189 attcaattgatgatgtatatgatctatattatagattacatacatca 235  Q
    |||||||| |||||||||||||||| |||||||||| | ||||||||    
T  40988404 attcaattaatgatgtatatgatctttattatagatcagatacatca 40988450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 240
Target Start/End: Original strand, 47011275 - 47011337
Alignment:
Q  178 tttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||| |||||||||||| ||||| ||| || || |||||||| || |||||||||||||||    
T  47011275 tttttaggttcattcaattaatgatatatgtggtccatattataaatcacatacatcattaat 47011337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 240
Target Start/End: Complemental strand, 48605179 - 48605117
Alignment:
Q  178 tttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||| |||||||||||| ||||||||| ||||  ||||||| ||  |||||||||||||||    
T  48605179 tttttaggttcattcaattaatgatgtatgtgattcatattatggaccacatacatcattaat 48605117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 240
Target Start/End: Original strand, 23392569 - 23392630
Alignment:
Q  179 ttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    ||||| |||||||||| | ||||||||||||||| |||||||| |  |||||||||| ||||    
T  23392569 ttttaggttcattcaactaatgatgtatatgatcaatattataaaccacatacatcaataat 23392630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 239
Target Start/End: Complemental strand, 42761342 - 42761281
Alignment:
Q  178 tttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaa 239  Q
    |||||||||||||||| || ||||||||| || ||||||||||  |  ||||||||||||||    
T  42761342 tttttaagttcattcatttaatgatgtatgtggtctatattatgaaccacatacatcattaa 42761281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 239
Target Start/End: Original strand, 47991808 - 47991869
Alignment:
Q  178 tttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaa 239  Q
    |||||| ||||||||| || ||||||||| || || ||| ||||||| ||||||||||||||    
T  47991808 tttttaggttcattcatttaatgatgtatgtggtccataatatagatcacatacatcattaa 47991869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 240
Target Start/End: Original strand, 8751461 - 8751525
Alignment:
Q  176 attttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||||| |||||||||||| ||||||||| || | ||| ||||| |  |||||||||||||||    
T  8751461 attttttaggttcattcaattaatgatgtatgtggtttatgttataaaccacatacatcattaat 8751525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 240
Target Start/End: Original strand, 12993553 - 12993617
Alignment:
Q  176 attttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||||| |||||||||||| ||||||||| || |  ||||||| ||  |||||||||||||||    
T  12993553 attttttaggttcattcaattaatgatgtatgtggttcatattatggaccacatacatcattaat 12993617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 240
Target Start/End: Original strand, 24478694 - 24478758
Alignment:
Q  176 attttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||| | |||||||||||| ||||| ||| || ||||||||||| |  |||||||||||||||    
T  24478694 atttttgaggttcattcaattaatgatatatgtggtctatattataaaccacatacatcattaat 24478758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 240
Target Start/End: Complemental strand, 25378368 - 25378304
Alignment:
Q  176 attttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||||| |||||||||||| ||||||||| || || |||||||  |  |||||||||||||||    
T  25378368 attttttaggttcattcaattaatgatgtatgtggtcaatattatgaaccacatacatcattaat 25378304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 240
Target Start/End: Original strand, 38824320 - 38824384
Alignment:
Q  176 attttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||||| |||||||||||| ||||||||| || |  ||| ||||||  |||||||||||||||    
T  38824320 attttttatgttcattcaattaatgatgtatgtggttcataatatagaccacatacatcattaat 38824384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 237
Target Start/End: Original strand, 39362851 - 39362899
Alignment:
Q  189 attcaattgatgatgtatatgatctatattatagattacatacatcatt 237  Q
    |||||||| |||||||||||||||| |||||||||  |||||| |||||    
T  39362851 attcaattaatgatgtatatgatctttattatagaccacatacttcatt 39362899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 240
Target Start/End: Original strand, 50998333 - 50998397
Alignment:
Q  176 attttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||||| |||||||||||| ||||||||| || |  ||||||| || || |||||||||||||    
T  50998333 attttttaggttcattcaattaatgatgtatttggttcatattatggactatatacatcattaat 50998397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 240
Target Start/End: Complemental strand, 52253649 - 52253585
Alignment:
Q  176 attttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    ||||||||| ||||||||||| |||||| || |  || |||||||| || |||||||||||||||    
T  52253649 attttttaaattcattcaattaatgatgcatgtagtccatattataaatcacatacatcattaat 52253585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 174 - 239
Target Start/End: Original strand, 17461 - 17526
Alignment:
Q  174 taattttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaa 239  Q
    |||||||||||||||||||| || ||||||||| || ||||||||||| |  ||||||||||||||    
T  17461 taattttttaagttcattcatttaatgatgtatgtggtctatattataaaccacatacatcattaa 17526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 239
Target Start/End: Complemental strand, 491961 - 491898
Alignment:
Q  176 attttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaa 239  Q
    |||||||||||||||| | || |||||||||||||||||||||||  |  ||||||||||||||    
T  491961 attttttaagttcatttatttaatgatgtatatgatctatattatgaaccacatacatcattaa 491898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000002; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 186 - 237
Target Start/End: Complemental strand, 12218546 - 12218495
Alignment:
Q  186 ttcattcaattgatgatgtatatgatctatattatagattacatacatcatt 237  Q
    ||||||||||| |||||||||| ||||| |||||||||||||||| ||||||    
T  12218546 ttcattcaattaatgatgtataagatctttattatagattacatatatcatt 12218495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 178 - 240
Target Start/End: Original strand, 3212272 - 3212334
Alignment:
Q  178 tttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||| |||||||||||| ||||||||| |||| |||||||| ||  |||||||||||||||    
T  3212272 tttttaggttcattcaattaatgatgtatgtgatttatattatggaccacatacatcattaat 3212334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 178 - 240
Target Start/End: Original strand, 10731504 - 10731566
Alignment:
Q  178 tttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||| ||||||||| || ||||||||| |||||||||||||| |  |||||||||||||||    
T  10731504 tttttaggttcattcatttaatgatgtatgtgatctatattataaaccacatacatcattaat 10731566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 189 - 239
Target Start/End: Complemental strand, 12383687 - 12383637
Alignment:
Q  189 attcaattgatgatgtatatgatctatattatagattacatacatcattaa 239  Q
    |||||||| |||||||| ||||||| ||||||||| |||||||||||||||    
T  12383687 attcaattaatgatgtacatgatctttattatagactacatacatcattaa 12383637  T

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Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 239
Target Start/End: Complemental strand, 10731582 - 10731521
Alignment:
Q  178 tttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaa 239  Q
    |||||| |||||||||||| ||||||||| || | |||| ||||||| ||||||||||||||    
T  10731582 tttttaggttcattcaattaatgatgtatgtggtttataatatagatcacatacatcattaa 10731521  T

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Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 229
Target Start/End: Complemental strand, 3586122 - 3586062
Alignment:
Q  169 aattttaattttttaagttcattcaattgatgatgtatatgatctatattatagattacat 229  Q
    |||||||| |||||| |||||||||||| || || |||||||||||||||| ||| |||||    
T  3586122 aattttaaatttttaggttcattcaattaataatatatatgatctatattacagactacat 3586062  T

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Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 240
Target Start/End: Complemental strand, 7418986 - 7418922
Alignment:
Q  176 attttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||||||||||||| |||| ||||||||| || ||||||||||  |  |||||||||||||||    
T  7418986 attttttaagttcattaaattaatgatgtatgtggtctatattatgaaccacatacatcattaat 7418922  T

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Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 223
Target Start/End: Original strand, 11637202 - 11637246
Alignment:
Q  179 ttttaagttcattcaattgatgatgtatatgatctatattataga 223  Q
    |||||| ||||||||||| |||||||||||||||| |||||||||    
T  11637202 ttttaaattcattcaattaatgatgtatatgatctttattataga 11637246  T

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Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 240
Target Start/End: Original strand, 26498618 - 26498686
Alignment:
Q  172 tttaattttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    ||||| |||||| |||| ||||||| |||||||||||| |  ||||||||||  |||||||||||||||    
T  26498618 tttaactttttaggttccttcaattaatgatgtatatggttcatattatagaccacatacatcattaat 26498686  T

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Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 15467612 - 15467666
Alignment:
Q  186 ttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||| ||||  |||||||| |||||||||||||| || |||||||||||||||    
T  15467612 ttcatttaattattgatgtatgtgatctatattataaatcacatacatcattaat 15467666  T

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Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 15467674 - 15467620
Alignment:
Q  186 ttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    ||||||||||| ||||||||| |||| |||| ||||||| |||||||||| ||||    
T  15467674 ttcattcaattaatgatgtatgtgatttataatatagatcacatacatcaataat 15467620  T

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Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 212
Target Start/End: Original strand, 3773193 - 3773233
Alignment:
Q  172 tttaattttttaagttcattcaattgatgatgtatatgatc 212  Q
    |||| ||||||||||| |||||||| |||||||||||||||    
T  3773193 tttacttttttaagtttattcaattaatgatgtatatgatc 3773233  T

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Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 237
Target Start/End: Original strand, 13506868 - 13506924
Alignment:
Q  181 ttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcatt 237  Q
    |||| |||||| |||| |||||||||||||||| ||||||||| || || |||||||    
T  13506868 ttaaattcatttaattaatgatgtatatgatctttattatagactagatgcatcatt 13506924  T

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Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 240
Target Start/End: Complemental strand, 21506562 - 21506510
Alignment:
Q  188 cattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    ||||||||| ||||||||| |||||| |||||||  | |||||||||||||||    
T  21506562 cattcaattaatgatgtatgtgatctttattatatgtcacatacatcattaat 21506510  T

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Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 216
Target Start/End: Complemental strand, 24151044 - 24151004
Alignment:
Q  176 attttttaagttcattcaattgatgatgtatatgatctata 216  Q
    |||||||||||||| |||||| |||||||||||||| ||||    
T  24151044 attttttaagttcactcaattaatgatgtatatgatttata 24151004  T

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Target: scaffold0340 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 14072 - 14126
Alignment:
Q  186 ttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    ||||||||||| |||||||||||| ||||||||||| | |||||| |||||||||    
T  14072 ttcattcaattaatgatgtatatggtctatattataaactacatagatcattaat 14126  T

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Target: scaffold0172 (Bit Score: 35; Significance: 0.00000000008; HSPs: 2)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 178 - 240
Target Start/End: Original strand, 11615 - 11677
Alignment:
Q  178 tttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||| |||||||||||| ||||||||| || || ||||||||||  |||||||||||||||    
T  11615 tttttaggttcattcaattaatgatgtatgtggtccatattatagaccacatacatcattaat 11677  T

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Target: scaffold0172; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 240
Target Start/End: Complemental strand, 11693 - 11631
Alignment:
Q  178 tttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    |||||| |||||||||||| ||||||||| || |||||| ||| ||  |||||||||||||||    
T  11693 tttttaggttcattcaattaatgatgtatgtggtctataatatggaccacatacatcattaat 11631  T

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Target: scaffold0047 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 223
Target Start/End: Original strand, 63469 - 63514
Alignment:
Q  178 tttttaagttcattcaattgatgatgtatatgatctatattataga 223  Q
    |||||| |||||||||||| ||||||||||||||| ||||||||||    
T  63469 tttttacgttcattcaattaatgatgtatatgatccatattataga 63514  T

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Target: scaffold1786 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold1786
Description:

Target: scaffold1786; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 240
Target Start/End: Complemental strand, 618 - 557
Alignment:
Q  179 ttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcattaat 240  Q
    ||||| |||||||||||| ||||||||| ||||| |||||||| |  |||||||||| ||||    
T  618 ttttaggttcattcaattaatgatgtatgtgatcaatattataaaccacatacatcaataat 557  T

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Target: scaffold0111 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 238
Target Start/End: Complemental strand, 38116 - 38056
Alignment:
Q  178 tttttaagttcattcaattgatgatgtatatgatctatattatagattacatacatcatta 238  Q
    |||||| |||||||||||| ||||||||| || ||||||||||  |  |||||||||||||    
T  38116 tttttaggttcattcaattaatgatgtatgtggtctatattatgaaccacatacatcatta 38056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 219
Target Start/End: Complemental strand, 38425 - 38385
Alignment:
Q  179 ttttaagttcattcaattgatgatgtatatgatctatatta 219  Q
    |||||| ||||||||||| ||||||||| ||||||||||||    
T  38425 ttttaaattcattcaattaatgatgtatgtgatctatatta 38385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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