View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8531_low_14 (Length: 257)
Name: NF8531_low_14
Description: NF8531
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8531_low_14 |
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Alignment Details
Target: chr7 (Bit Score: 240; Significance: 1e-133; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 1 - 252
Target Start/End: Original strand, 46905275 - 46905526
Alignment:
| Q |
1 |
tgactacgagaatattgattttggcaaacctttgcatactttatgttgttattctcttttttatagggtacgttcctttaatatggatatgatcttaaca |
100 |
Q |
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| T |
46905275 |
tgactacgagaatattgattttggcaaacctttgcatactttatgttgttattctcttttttatagggtacgttgctttaatatggatatgatcttaaca |
46905374 |
T |
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| Q |
101 |
cgaataacattgttgaatttccttaaaataaaaatgttgaattggtaatagtaatttatttatttttgaattattattggtaatagattaagttaattat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46905375 |
cgaataacattgttgaatttccttaaaataaaaatgttgaattggtaatagtaatttatttatttttgaattattattggtaatagattaagttaattat |
46905474 |
T |
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| Q |
201 |
cacactatcacatttaagatcatggttaatttagaattatgcacctccaaac |
252 |
Q |
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|||||||||||||||||||||||||||||||| |||||||||||| |||||| |
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| T |
46905475 |
cacactatcacatttaagatcatggttaatttggaattatgcaccgccaaac |
46905526 |
T |
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