View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8532_high_6 (Length: 266)
Name: NF8532_high_6
Description: NF8532
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8532_high_6 |
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Alignment Details
Target: chr4 (Bit Score: 119; Significance: 7e-61; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 25 - 159
Target Start/End: Original strand, 53084979 - 53085113
Alignment:
| Q |
25 |
ttttgtcggacctaaataaacggtaaactctccttaagagttttcaacaactgttacgtccaatgttagattcgaatcaagatcttgattaatctataat |
124 |
Q |
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| T |
53084979 |
ttttgtcggacctaaataaacggtaaactctccctaagagttttcaacaaatgttacgtccaatgttagattcgaaccaagatcttggttaatctataat |
53085078 |
T |
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| Q |
125 |
agatatgtgtcatctcatatagacgttcttgggtg |
159 |
Q |
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| T |
53085079 |
agatatgtgtcatctcatatagacgttcttgggtg |
53085113 |
T |
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