View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8535_low_14 (Length: 246)

Name: NF8535_low_14
Description: NF8535
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8535_low_14
NF8535_low_14
[»] chr8 (29 HSPs)
chr8 (3-246)||(7372927-7373181)
chr8 (1-246)||(45130720-45130964)
chr8 (1-164)||(18818212-18818375)
chr8 (1-159)||(28648851-28649010)
chr8 (1-164)||(23406536-23406699)
chr8 (1-164)||(22626890-22627054)
chr8 (1-244)||(25362842-25363106)
chr8 (1-162)||(23648708-23648870)
chr8 (1-164)||(20536363-20536526)
chr8 (11-164)||(21923731-21923884)
chr8 (1-164)||(18879040-18879202)
chr8 (1-164)||(6759410-6759575)
chr8 (1-246)||(21918699-21918966)
chr8 (1-164)||(16199449-16199612)
chr8 (1-246)||(31971410-31971676)
chr8 (1-164)||(22875219-22875384)
chr8 (1-163)||(16092144-16092308)
chr8 (170-246)||(16199347-16199422)
chr8 (159-246)||(23406715-23406813)
chr8 (170-246)||(18878926-18879013)
chr8 (159-246)||(20536542-20536640)
chr8 (200-246)||(21255605-21255651)
chr8 (203-246)||(16092030-16092073)
chr8 (200-246)||(18818099-18818145)
chr8 (200-246)||(21249767-21249813)
chr8 (204-246)||(22627125-22627167)
chr8 (94-131)||(13507920-13507957)
chr8 (94-131)||(13597452-13597489)
chr8 (210-246)||(23648949-23648985)
[»] chr6 (20 HSPs)
chr6 (3-246)||(20637983-20638247)
chr6 (1-246)||(20360660-20360926)
chr6 (1-164)||(25629157-25629321)
chr6 (1-161)||(18409632-18409793)
chr6 (1-164)||(29060695-29060859)
chr6 (1-162)||(17287601-17287762)
chr6 (1-164)||(22780030-22780193)
chr6 (4-164)||(20593931-20594092)
chr6 (1-162)||(19303345-19303507)
chr6 (87-243)||(18821522-18821699)
chr6 (1-164)||(16920436-16920599)
chr6 (1-164)||(22831657-22831820)
chr6 (170-246)||(16920333-16920409)
chr6 (161-246)||(17287485-17287581)
chr6 (160-246)||(22831837-22831923)
chr6 (113-162)||(11185769-11185818)
chr6 (163-246)||(22779916-22780010)
chr6 (160-242)||(11185837-11185919)
chr6 (87-133)||(18456956-18457002)
chr6 (82-131)||(25644558-25644607)
[»] chr2 (23 HSPs)
chr2 (1-246)||(23654099-23654352)
chr2 (1-164)||(23076597-23076760)
chr2 (1-164)||(22737983-22738146)
chr2 (1-246)||(23286016-23286282)
chr2 (1-150)||(23060668-23060815)
chr2 (1-161)||(27753730-27753890)
chr2 (1-164)||(22337270-22337434)
chr2 (1-162)||(23660177-23660339)
chr2 (1-163)||(22731037-22731200)
chr2 (1-246)||(20309260-20309526)
chr2 (1-164)||(37919-38082)
chr2 (1-164)||(298617-298780)
chr2 (87-164)||(32451732-32451809)
chr2 (160-246)||(37816-37902)
chr2 (159-246)||(298504-298601)
chr2 (160-246)||(27753910-27754007)
chr2 (164-246)||(22730922-22731015)
chr2 (160-202)||(32451673-32451715)
chr2 (87-133)||(19672068-19672114)
chr2 (200-246)||(22337501-22337547)
chr2 (160-245)||(22737870-22737966)
chr2 (2-133)||(23708452-23708584)
chr2 (200-246)||(23660408-23660454)
[»] chr1 (23 HSPs)
chr1 (1-164)||(22532424-22532588)
chr1 (1-164)||(50210015-50210179)
chr1 (1-246)||(22355874-22356141)
chr1 (1-246)||(22357560-22357827)
chr1 (1-246)||(27250429-27250695)
chr1 (1-163)||(34509935-34510098)
chr1 (1-246)||(21026835-21027101)
chr1 (1-161)||(22354378-22354538)
chr1 (1-164)||(20135342-20135506)
chr1 (159-246)||(38801091-38801178)
chr1 (101-246)||(20846919-20847085)
chr1 (1-50)||(48603669-48603718)
chr1 (159-202)||(22354316-22354359)
chr1 (1-151)||(38801207-38801357)
chr1 (87-133)||(16758892-16758938)
chr1 (200-246)||(22532655-22532701)
chr1 (200-246)||(34510166-34510212)
chr1 (160-246)||(50209902-50209998)
chr1 (87-133)||(433248-433294)
chr1 (200-246)||(20135573-20135619)
chr1 (1-50)||(22468614-22468662)
chr1 (87-131)||(21342334-21342378)
chr1 (87-131)||(21347199-21347243)
[»] chr4 (31 HSPs)
chr4 (1-246)||(12902912-12903178)
chr4 (1-202)||(16239736-16239936)
chr4 (1-164)||(44052984-44053147)
chr4 (1-163)||(16377325-16377489)
chr4 (1-246)||(3096798-3097064)
chr4 (1-163)||(22636590-22636751)
chr4 (1-246)||(7089032-7089298)
chr4 (1-244)||(17047775-17048038)
chr4 (1-164)||(14038803-14038967)
chr4 (1-246)||(14053002-14053268)
chr4 (1-160)||(23374166-23374325)
chr4 (1-163)||(7893858-7894018)
chr4 (88-202)||(6190704-6190810)
chr4 (102-164)||(7798953-7799015)
chr4 (1-50)||(16270153-16270202)
chr4 (43-164)||(15091093-15091215)
chr4 (160-201)||(7894036-7894077)
chr4 (160-200)||(44053164-44053204)
chr4 (160-246)||(22636769-22636866)
chr4 (82-133)||(44102446-44102497)
chr4 (197-246)||(16377211-16377260)
chr4 (160-202)||(7799032-7799074)
chr4 (200-246)||(15552199-15552245)
chr4 (200-246)||(16597031-16597077)
chr4 (200-246)||(20156979-20157025)
chr4 (200-246)||(22633902-22633948)
chr4 (10-50)||(14280466-14280507)
chr4 (200-245)||(44928613-44928658)
chr4 (10-50)||(54798680-54798721)
chr4 (93-133)||(44928757-44928797)
chr4 (81-133)||(52243027-52243079)
[»] chr3 (40 HSPs)
chr3 (1-246)||(20698136-20698402)
chr3 (1-164)||(26687042-26687205)
chr3 (1-164)||(40213523-40213687)
chr3 (1-164)||(13442429-13442592)
chr3 (1-164)||(43841087-43841250)
chr3 (1-164)||(14576635-14576799)
chr3 (1-164)||(17488011-17488175)
chr3 (1-164)||(18438689-18438853)
chr3 (1-164)||(11424565-11424729)
chr3 (1-164)||(25476187-25476351)
chr3 (1-152)||(17499493-17499644)
chr3 (1-164)||(23083164-23083327)
chr3 (1-161)||(14973009-14973170)
chr3 (1-164)||(14572743-14572907)
chr3 (1-133)||(42386565-42386698)
chr3 (1-164)||(16796702-16796865)
chr3 (1-140)||(30029994-30030133)
chr3 (160-243)||(16809735-16809818)
chr3 (159-246)||(12399540-12399627)
chr3 (1-140)||(12399364-12399502)
chr3 (160-246)||(26687222-26687319)
chr3 (1-50)||(14179587-14179636)
chr3 (5-50)||(24153126-24153171)
chr3 (160-246)||(17488192-17488289)
chr3 (200-246)||(17499725-17499771)
chr3 (200-246)||(40213410-40213456)
chr3 (82-131)||(23274924-23274973)
chr3 (194-246)||(30030208-30030260)
chr3 (81-133)||(52523561-52523613)
chr3 (172-246)||(13442621-13442706)
chr3 (82-133)||(53070532-53070583)
chr3 (200-246)||(12340138-12340184)
chr3 (200-246)||(14572974-14573020)
chr3 (200-246)||(17247975-17248021)
chr3 (205-246)||(14973245-14973286)
chr3 (93-133)||(2051033-2051073)
chr3 (200-244)||(14665991-14666035)
chr3 (200-244)||(14735504-14735548)
chr3 (166-202)||(43841273-43841309)
chr3 (210-246)||(43842574-43842610)
[»] scaffold0175 (2 HSPs)
scaffold0175 (1-164)||(13247-13410)
scaffold0175 (160-202)||(13427-13469)
[»] scaffold0231 (2 HSPs)
scaffold0231 (1-164)||(23037-23201)
scaffold0231 (210-246)||(23278-23314)
[»] scaffold0021 (2 HSPs)
scaffold0021 (1-164)||(124740-124903)
scaffold0021 (160-202)||(124920-124962)
[»] scaffold0352 (1 HSPs)
scaffold0352 (25-246)||(17697-17929)
[»] scaffold0193 (1 HSPs)
scaffold0193 (1-246)||(13366-13632)
[»] scaffold0145 (3 HSPs)
scaffold0145 (1-164)||(38915-39079)
scaffold0145 (1-50)||(33096-33145)
scaffold0145 (160-246)||(39096-39191)
[»] scaffold0121 (2 HSPs)
scaffold0121 (1-164)||(8335-8499)
scaffold0121 (200-246)||(8221-8267)
[»] scaffold0042 (2 HSPs)
scaffold0042 (1-164)||(24104-24268)
scaffold0042 (170-246)||(23991-24077)
[»] chr5 (29 HSPs)
chr5 (1-164)||(25421687-25421851)
chr5 (1-163)||(23390300-23390462)
chr5 (1-164)||(25431549-25431713)
chr5 (1-246)||(8286542-8286808)
chr5 (1-162)||(24493723-24493885)
chr5 (1-164)||(9078107-9078271)
chr5 (1-164)||(24529375-24529539)
chr5 (1-164)||(13025465-13025629)
chr5 (1-164)||(13095649-13095813)
chr5 (1-164)||(21985949-21986113)
chr5 (1-164)||(1096622-1096786)
chr5 (1-164)||(22075174-22075337)
chr5 (2-164)||(22107176-22107338)
chr5 (1-246)||(21292670-21292936)
chr5 (160-246)||(22075354-22075440)
chr5 (171-246)||(22107073-22107148)
chr5 (170-246)||(23390185-23390272)
chr5 (160-246)||(24493904-24494000)
chr5 (10-50)||(22412337-22412377)
chr5 (166-246)||(13025652-13025742)
chr5 (166-246)||(13095836-13095926)
chr5 (200-246)||(24529607-24529653)
chr5 (88-133)||(22144292-22144337)
chr5 (82-133)||(36154662-36154713)
chr5 (200-246)||(1096853-1096899)
chr5 (200-246)||(19660526-19660572)
chr5 (163-246)||(21985836-21985929)
chr5 (200-246)||(22119882-22119928)
chr5 (1-57)||(18418732-18418789)
[»] scaffold0292 (3 HSPs)
scaffold0292 (1-164)||(3625-3788)
scaffold0292 (1-164)||(497-661)
scaffold0292 (160-246)||(3805-3902)
[»] scaffold0026 (4 HSPs)
scaffold0026 (1-163)||(26050-26213)
scaffold0026 (1-145)||(40012-40156)
scaffold0026 (200-246)||(26611-26657)
scaffold0026 (200-246)||(40242-40288)
[»] scaffold0003 (2 HSPs)
scaffold0003 (1-164)||(339753-339916)
scaffold0003 (200-246)||(339640-339686)
[»] scaffold0540 (1 HSPs)
scaffold0540 (1-131)||(2987-3117)
[»] scaffold0016 (2 HSPs)
scaffold0016 (1-163)||(2006-2168)
scaffold0016 (170-246)||(2196-2283)
[»] scaffold0484 (1 HSPs)
scaffold0484 (1-244)||(1069-1333)
[»] chr7 (22 HSPs)
chr7 (4-164)||(9509347-9509507)
chr7 (1-162)||(12698987-12699148)
chr7 (1-164)||(3564166-3564330)
chr7 (1-246)||(16385947-16386213)
chr7 (1-164)||(38227635-38227799)
chr7 (1-164)||(10589193-10589356)
chr7 (9-246)||(27847533-27847791)
chr7 (1-246)||(40443544-40443809)
chr7 (1-164)||(26212151-26212314)
chr7 (5-164)||(15143839-15144000)
chr7 (159-246)||(26212330-26212417)
chr7 (1-50)||(18456330-18456379)
chr7 (160-246)||(9509524-9509621)
chr7 (160-246)||(12699167-12699264)
chr7 (200-246)||(3564053-3564099)
chr7 (160-246)||(38227816-38227912)
chr7 (2-133)||(2279952-2280084)
chr7 (81-133)||(12255625-12255677)
chr7 (82-133)||(12756550-12756601)
chr7 (200-246)||(39267335-39267381)
chr7 (10-50)||(48273542-48273583)
chr7 (93-133)||(17061794-17061834)
[»] scaffold0647 (1 HSPs)
scaffold0647 (1-161)||(5927-6087)
[»] scaffold0122 (4 HSPs)
scaffold0122 (1-164)||(25867-26031)
scaffold0122 (1-160)||(33301-33461)
scaffold0122 (200-246)||(33183-33229)
scaffold0122 (203-246)||(25754-25797)
[»] scaffold0080 (1 HSPs)
scaffold0080 (1-164)||(40067-40231)
[»] scaffold0011 (3 HSPs)
scaffold0011 (1-164)||(52068-52230)
scaffold0011 (1-246)||(167679-167945)
scaffold0011 (160-246)||(52247-52344)
[»] scaffold1842 (1 HSPs)
scaffold1842 (1-246)||(749-1015)
[»] scaffold0639 (2 HSPs)
scaffold0639 (10-164)||(8639-8793)
scaffold0639 (163-201)||(8813-8851)
[»] scaffold0088 (2 HSPs)
scaffold0088 (1-162)||(21066-21227)
scaffold0088 (190-246)||(21266-21322)
[»] scaffold0165 (2 HSPs)
scaffold0165 (5-240)||(3640-3896)
scaffold0165 (5-240)||(7704-7960)
[»] scaffold0056 (2 HSPs)
scaffold0056 (1-164)||(17017-17181)
scaffold0056 (164-246)||(16904-16996)
[»] scaffold0456 (1 HSPs)
scaffold0456 (1-246)||(10126-10392)
[»] scaffold0395 (1 HSPs)
scaffold0395 (1-162)||(767-929)
[»] scaffold0235 (1 HSPs)
scaffold0235 (35-246)||(11213-11445)
[»] scaffold0217 (2 HSPs)
scaffold0217 (1-164)||(16402-16566)
scaffold0217 (200-246)||(16288-16334)
[»] scaffold0130 (2 HSPs)
scaffold0130 (1-164)||(27985-28149)
scaffold0130 (202-246)||(28924-28968)
[»] scaffold0084 (1 HSPs)
scaffold0084 (6-164)||(10323-10482)
[»] scaffold0114 (1 HSPs)
scaffold0114 (2-246)||(15165-15430)
[»] scaffold0228 (3 HSPs)
scaffold0228 (1-133)||(4662-4794)
scaffold0228 (1-133)||(12244-12376)
scaffold0228 (1-133)||(22196-22328)
[»] scaffold0141 (1 HSPs)
scaffold0141 (1-164)||(39631-39795)
[»] scaffold0049 (1 HSPs)
scaffold0049 (1-164)||(75017-75181)
[»] scaffold0309 (2 HSPs)
scaffold0309 (3-164)||(6767-6928)
scaffold0309 (160-246)||(6945-7031)
[»] scaffold0403 (1 HSPs)
scaffold0403 (1-246)||(5004-5269)
[»] scaffold0427 (2 HSPs)
scaffold0427 (1-164)||(13650-13813)
scaffold0427 (160-246)||(13830-13916)
[»] scaffold0490 (2 HSPs)
scaffold0490 (1-164)||(2107-2270)
scaffold0490 (160-246)||(2287-2373)
[»] scaffold0598 (1 HSPs)
scaffold0598 (1-246)||(752-1018)
[»] scaffold0305 (2 HSPs)
scaffold0305 (38-164)||(20595-20721)
scaffold0305 (160-246)||(20738-20835)
[»] scaffold0358 (2 HSPs)
scaffold0358 (1-246)||(90-357)
scaffold0358 (1-246)||(4866-5133)
[»] scaffold0070 (1 HSPs)
scaffold0070 (1-133)||(4679-4810)
[»] scaffold0113 (2 HSPs)
scaffold0113 (1-164)||(32219-32382)
scaffold0113 (172-246)||(32411-32485)
[»] scaffold0064 (2 HSPs)
scaffold0064 (164-246)||(47325-47407)
scaffold0064 (93-164)||(47233-47304)
[»] scaffold0034 (2 HSPs)
scaffold0034 (87-161)||(51690-51764)
scaffold0034 (160-202)||(51628-51670)
[»] scaffold0718 (2 HSPs)
scaffold0718 (170-246)||(4831-4907)
scaffold0718 (93-164)||(4934-5005)
[»] scaffold0389 (1 HSPs)
scaffold0389 (158-246)||(13297-13385)
[»] scaffold0351 (2 HSPs)
scaffold0351 (1-164)||(16434-16597)
scaffold0351 (160-246)||(16614-16700)
[»] scaffold0032 (2 HSPs)
scaffold0032 (160-246)||(51914-52000)
scaffold0032 (100-164)||(51833-51897)
[»] scaffold0908 (1 HSPs)
scaffold0908 (1-50)||(3103-3152)
[»] scaffold0120 (4 HSPs)
scaffold0120 (93-161)||(16334-16403)
scaffold0120 (1-164)||(32761-32924)
scaffold0120 (1-164)||(46081-46244)
scaffold0120 (200-246)||(16473-16519)
[»] scaffold0106 (2 HSPs)
scaffold0106 (1-164)||(1441-1604)
scaffold0106 (1-164)||(7418-7581)
[»] scaffold0327 (1 HSPs)
scaffold0327 (1-72)||(3424-3496)
[»] scaffold0012 (1 HSPs)
scaffold0012 (82-133)||(225643-225694)
[»] scaffold0876 (1 HSPs)
scaffold0876 (200-246)||(2774-2820)
[»] scaffold0627 (1 HSPs)
scaffold0627 (200-246)||(290-336)
[»] scaffold0266 (1 HSPs)
scaffold0266 (200-246)||(18647-18693)
[»] scaffold0031 (1 HSPs)
scaffold0031 (82-133)||(20259-20310)
[»] scaffold0839 (1 HSPs)
scaffold0839 (200-246)||(1766-1812)
[»] scaffold0347 (1 HSPs)
scaffold0347 (200-246)||(414-460)
[»] scaffold0221 (1 HSPs)
scaffold0221 (200-246)||(12498-12544)
[»] scaffold0075 (1 HSPs)
scaffold0075 (200-246)||(7983-8029)
[»] scaffold0037 (1 HSPs)
scaffold0037 (200-246)||(80021-80067)
[»] scaffold0151 (1 HSPs)
scaffold0151 (210-246)||(10540-10576)


Alignment Details
Target: chr8 (Bit Score: 133; Significance: 3e-69; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 3 - 246
Target Start/End: Original strand, 7372927 - 7373181
Alignment:
Q  3 ttatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaactct 102  Q
    |||||||||| |||||||||||||||| |||||||||||||||||||| | |||| |||| || |||||||||| || ||| | ||||||||||||||||    
T  7372927 ttatatcacaacataatcaacatcaacacatcttaaacagcttcacagattataattaacatcctcattaagtctcactaccaccccaaagttcaactct 7373026  T
Q  103 caacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtcactcgccgtgtcgagttcaggtcagaatcccacaagtttca--- 199  Q
    ||||||||||||||||||||||||||||| ||||||||||||| ||||| |||||||||||||||| |||||||||||||||||  |||||||||||       
T  7373027 caacaactcgtgcaacaaaggtcgcaaaacctaacaagacactctgtttctgggtcactcgccgtggcgagttcaggtcagaatttcacaagtttcattc 7373126  T
Q  200 --------ttccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
            ||||||||| |||  ||||||| ||||||||||||||||||||||||    
T  7373127 tacaatctttccaggttcaatttcatcctacattctttcctaatcattattagac 7373181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 45130964 - 45130720
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    ||||||||||||||||||||| || ||||  |||||| |||||||||||| | |||| |||| |||| ||||||||  ||| ||| || |  || |||||    
T  45130964 cattatatcacatcataatcatcaacaacaaatcttatacagcttcacagattataattaacctcattattaagtcttaatcctacccaagggtccaact 45130865  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtcactcgccgtgtcgagttcaggtcagaatcccacaagtttcat 200  Q
    ||| |||||||||||||||||||||||||||||||| ||| |||| ||||| |||||||||||| | | |||||||||||||||||||||||||||| ||    
T  45130864 ctcgacaactcgtgcaacaaaggtcgcaaaatctaataagtcactctgtttctgggtcactcgc-gaggcgagttcaggtcagaatcccacaagtttaat 45130766  T
Q  201 tccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    |||||||| |||| ||||||| ||||||||||||||||||||||||    
T  45130765 tccaggttcaatctcatcctacattctttcctaatcattattagac 45130720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 18818375 - 18818212
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    |||||||||||| |||||||||||||||| |||||||||||||||||||| | |||| |||| || ||||||||||  ||||||| || ||| |||||||    
T  18818375 cattatatcacaacataatcaacatcaacacatcttaaacagcttcacagattataattaacatcctcattaagtcttaatactaccctaaatttcaact 18818276  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtcactcgc 164  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||    
T  18818275 ctcaacaactcgtgcaacaaaggtcgcaaaacctaacaagacactctgtttctgggtcactcgc 18818212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 28649010 - 28648851
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||  | |||| |||| ||||||||||||| |||||||| ||||| ||||||||    
T  28649010 cattatatcacatcataatcaacatcaacacatcttaaacagcttcacatattataattaacatcatcattaagtctcaatactaccccaaggttcaact 28648911  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaat-ctaacaagacactttgtttttgggtca 159  Q
    |||||||||||||||||||||||||||||||| |||||||| |||| ||||| |||||||    
T  28648910 ctcaacaactcgtgcaacaaaggtcgcaaaatcctaacaaggcactctgtttctgggtca 28648851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 23406536 - 23406699
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    |||||||||||| |||| ||||||||||| ||||||||||| |||||||  | |||| |||| || |||||||||||||||| |||||||||||||||||    
T  23406536 cattatatcacaacatagtcaacatcaacacatcttaaacaacttcacatattataattaacatcctcattaagtcccaatattatcccaaagttcaact 23406635  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtcactcgc 164  Q
    ||||| ||||||||||||||||||| ||||| |||||||| |||| ||||| ||||||||||||    
T  23406636 ctcaataactcgtgcaacaaaggtcacaaaacctaacaaggcactctgtttctgggtcactcgc 23406699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 22626890 - 22627054
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    |||||||||||||||| |||| ||||||| |||||||||||||||||||| | |||| |||| || |||||||||| |||||||| ||||| ||||||||    
T  22626890 cattatatcacatcattatcatcatcaacacatcttaaacagcttcacagattataattaacatcctcattaagtctcaatactaccccaaggttcaact 22626989  T
Q  101 ctcaacaactcgtgcaacaaaggtcgc-aaaatctaacaagacactttgtttttgggtcactcgc 164  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||| ||||| | | ||||||||    
T  22626990 ctcaacaactcgtgcaacaaaggtcgcaaaaacctaacaagacactctgtttctagatcactcgc 22627054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 25363106 - 25362842
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    ||||||| |||||||||||||||| |||| |||||||||||||||||||| | |||| || | || ||||||||||  ||||||| || || ||||||||    
T  25363106 cattataccacatcataatcaacaacaacacatcttaaacagcttcacagattataattagcctcttcattaagtcttaatactacccaaaggttcaact 25363007  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtca---------------------ctcgccgtgtcgagttcagg 179  Q
    ||||||||||||||||| |||||||||||| ||| ||||| |||| |||||  ||||||                     |||||| || ||||||||||    
T  25363006 ctcaacaactcgtgcaagaaaggtcgcaaagtctcacaaggcactctgtttccgggtcactctcgaggcgagagcctctgctcgccatggcgagttcagg 25362907  T
Q  180 tcagaatcccacaagtttcattccaggtttaatcacatcctagattctttcctaatcattattag 244  Q
    ||||||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||    
T  25362906 tcagaatcccacaagtttcattccaggttcaatctcatcctacattctttcctaatcattattag 25362842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 23648708 - 23648870
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| |||| | |||| |||| ||||||||| |||  ||||||| ||||| ||||||||    
T  23648708 cattatatcacatcataatcaacatcaacacatcttaaacagcttaacagattataattaacatcatcattaggtcttaatactaccccaaggttcaact 23648807  T
Q  101 ctcaacaactcgtgcaacaaaggtcgca-aaatctaacaagacactttgtttttgggtcactc 162  Q
    |||||||||||||||||||||||||||| ||| |||||||| |||| ||||| ||||| ||||    
T  23648808 ctcaacaactcgtgcaacaaaggtcgcataaacctaacaagtcactctgtttctgggttactc 23648870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 20536363 - 20536526
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    |||||||||||||||||||| |||||||| ||||||||||| |||||||| | |||| |||| || ||||||||||  ||||||| ||||| |||||||     
T  20536363 cattatatcacatcataatcgacatcaacacatcttaaacaacttcacagattataattaacatcctcattaagtcttaatactaccccaaggttcaaca 20536462  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtcactcgc 164  Q
    ||| ||||||||||||||||||||||||||| |||| ||| |||| ||||| ||||||||||||    
T  20536463 ctcgacaactcgtgcaacaaaggtcgcaaaacctaataagtcactctgtttctgggtcactcgc 20536526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 11 - 164
Target Start/End: Complemental strand, 21923884 - 21923731
Alignment:
Q  11 catcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaactctcaacaact 110  Q
    |||||||||||||| |||| |||||||||||||||||||| | |||| |||| |||||||||||||  ||||||| | ||| |||||||||||||| |||    
T  21923884 catcataatcaacaacaacacatcttaaacagcttcacagattataattaacatcatcattaagtcttaatactacctcaaggttcaactctcaactact 21923785  T
Q  111 cgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtcactcgc 164  Q
    || |||||||||||||||||| |||||||| |||| ||||| ||||||||||||    
T  21923784 cgggcaacaaaggtcgcaaaacctaacaaggcactctgtttctgggtcactcgc 21923731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 18879202 - 18879040
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    ||||||||||||||||||||||||||| | |||||||  ||||||||||| | |||  |||| |||||||||||||   || ||||||||| ||||||||    
T  18879202 cattatatcacatcataatcaacatcagcacatcttat-cagcttcacagattatagttaacatcatcattaagtcttgatgctatcccaaggttcaact 18879104  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtcactcgc 164  Q
    ||| ||||||||||||||||||| |||||||||||||||| |||| ||||| ||||||||||||    
T  18879103 ctcgacaactcgtgcaacaaaggccgcaaaatctaacaaggcactctgtttctgggtcactcgc 18879040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 6759410 - 6759575
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaa-cagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaac 99  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||||||| | |||| |||| ||||||||||||| |||||||| ||||| |||||||    
T  6759410 cattatatcacatcataatcaacatcaacacatcttaaaacagcttcacagattataattaacatcatcattaagtctcaatactaccccaaggttcaac 6759509  T
Q  100 tctcaacaactcgtgcaacaaaggtcgcaaaat-ctaacaagacactttgtttttgggtcactcgc 164  Q
    ||| | ||||| |||| ||| || | ||||||| ||||||||||||| ||||| ||||||||||||    
T  6759510 tcttagcaacttgtgcgacacagattgcaaaatcctaacaagacactctgtttctgggtcactcgc 6759575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 21918966 - 21918699
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    ||||||||||||||||||||| || |||| |||||||||||||||||||| || ||| |||| ||||| |||||||  |||  || || |  ||||||||    
T  21918966 cattatatcacatcataatcagcagcaacacatcttaaacagcttcacagatcgtaattaacctcatcgttaagtcttaatcttacccaagggttcaact 21918867  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtcactcgc---------------------cgtgtcgagttcagg 179  Q
    ||| ||||||| |||||||||||||||||||||||||||| |||| ||||| | ||||||||||                     | || ||||||||||    
T  21918866 ctcgacaactcatgcaacaaaggtcgcaaaatctaacaagtcactctgtttctaggtcactcgcgaggcgagagcctctgctcgccatggcgagttcagg 21918767  T
Q  180 tcagaatcccacaagtttca-ttccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    |||||||||||||||||||| ||||||||| |||| | ||||| ||||||| ||||||||||||||||    
T  21918766 tcagaatcccacaagtttcatttccaggttcaatctcttcctacattcttttctaatcattattagac 21918699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 16199612 - 16199449
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    |||||||| ||||||||||||||| ||||  |||||| |||||||||||| | |||| |||| ||||  |||||||  ||| ||| || |  ||||||||    
T  16199612 cattatattacatcataatcaacaacaacatatcttatacagcttcacagattataattaacctcattgttaagtcttaatcctacccaagggttcaact 16199513  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtcactcgc 164  Q
    ||| ||||||||||||||||||||||||||||| || ||| |||| ||||||||||||||||||    
T  16199512 ctcgacaactcgtgcaacaaaggtcgcaaaatccaataagtcactctgtttttgggtcactcgc 16199449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 31971410 - 31971676
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    |||||||||||||||||||||||| ||||  |||||| ||| |||||||| | |||| |||| ||||  |||||||  ||| ||| || || ||||| ||    
T  31971410 cattatatcacatcataatcaacaacaacatatcttatacatcttcacagattataattaacctcattgttaagtcttaatcctacccaaaggttcagct 31971509  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtc---------------------actcgccgtgtcgagttcagg 179  Q
    ||| |||||||||||||||||||||||||||||||||||| |||| | ||| ||||||                      ||||||| | ||||||||||    
T  31971510 ctcgacaactcgtgcaacaaaggtcgcaaaatctaacaagtcactctatttctgggtcgctcgcgaggtgacagcctctgctcgccggggcgagttcagg 31971609  T
Q  180 tcagaatcccacaagtttcattccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    |||||||| ||||||||| |||||||||| |||| ||||||| || |||||||||||||||||||||    
T  31971610 tcagaatctcacaagtttaattccaggttcaatctcatcctacatcctttcctaatcattattagac 31971676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 22875219 - 22875384
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatctt-aaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaac 99  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||||| | |||| |||| ||| |||||  || |||||||| ||||| |||||||    
T  22875219 cattatatcacatcataatcaacatcaacacatcttaaaacagcttcacagattataattaacatcaccattacatctcaatactaccccaaggttcaac 22875318  T
Q  100 tctcaacaactcgtgcaacaaaggtcgcaaa-atctaacaagacactttgtttttgggtcactcgc 164  Q
    ||| ||||||| |||| ||| || |||||||   |||||||| |||| ||||| ||||||||||||    
T  22875319 tcttaacaacttgtgcgacatagatcgcaaagccctaacaagtcactctgtttctgggtcactcgc 22875384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 16092308 - 16092144
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatctt-aaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaac 99  Q
    ||||||||||||||||||||||||||||| |||||| ||||| |||| ||  | |||| |||| ||||| ||||||| ||||| || ||||| |||||||    
T  16092308 cattatatcacatcataatcaacatcaacacatcttaaaacaacttcgcatattataattaacatcatccttaagtctcaatattaccccaaggttcaac 16092209  T
Q  100 tctcaacaactcgtgcaacaaaggtcgcaaaat-ctaacaagacactttgtttttgggtcactcg 163  Q
    ||| ||||||| |||  ||| || ||||||||| |||||| | |||| ||||| |||||||||||    
T  16092208 tcttaacaacttgtgtgacacagatcgcaaaatcctaacagggcactctgtttctgggtcactcg 16092144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 170 - 246
Target Start/End: Complemental strand, 16199422 - 16199347
Alignment:
Q  170 cgagttcaggtcagaatcccacaagtttcattccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||||||||||||||||||||| |||| |||| ||||| |||| ||||||| ||||||||||||||||||| ||||    
T  16199422 cgagttcaggtcagaatcccaca-gtttaattctaggttcaatctcatcctacattctttcctaatcattataagac 16199347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 246
Target Start/End: Original strand, 23406715 - 23406813
Alignment:
Q  159 actcgccgtgtcgagttcaggtcagaatcccacaagtttcattc-----------caggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    |||||||||| |||||||||||||||||||||||||||||||||           |||||  |||| ||||||| ||||||||||||||||||||||||    
T  23406715 actcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatctttccaggtccaatctcatcctacattctttcctaatcattattagac 23406813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 246
Target Start/End: Complemental strand, 18879013 - 18878926
Alignment:
Q  170 cgagttcaggtcagaatcccacaagtttcattc-----------caggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    |||||||||||||||||||||||||||||||||           |||||| |||| ||||||| ||||||||||||||||||||||||    
T  18879013 cgagttcaggtcagaatcccacaagtttcattctacaatctttccaggttcaatctcatcctacattctttcctaatcattattagac 18878926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 159 - 246
Target Start/End: Original strand, 20536542 - 20536640
Alignment:
Q  159 actcgccgtgtcgagttcaggtcagaatcccacaagtttcattc-----------caggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    |||||||||| ||||||||||||||||||||| |||||||||||           |||||| |||| ||||||| ||||||||||||||||||| ||||    
T  20536542 actcgccgtggcgagttcaggtcagaatcccataagtttcattctacaatctttccaggttcaatctcatcctacattctttcctaatcattatcagac 20536640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 200 - 246
Target Start/End: Original strand, 21255605 - 21255651
Alignment:
Q  200 ttccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||||||| |||| ||||||| ||||||||||||||||||||||||    
T  21255605 ttccaggttcaatctcatcctacattctttcctaatcattattagac 21255651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 203 - 246
Target Start/End: Complemental strand, 16092073 - 16092030
Alignment:
Q  203 caggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||||||||| ||| ||| ||||||||||||||||||||||||    
T  16092073 caggtttaatctcattctacattctttcctaatcattattagac 16092030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 246
Target Start/End: Complemental strand, 18818145 - 18818099
Alignment:
Q  200 ttccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||||||| |||| ||||||| ||| ||||||||||||||||||||    
T  18818145 ttccaggttcaatctcatcctacattttttcctaatcattattagac 18818099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 246
Target Start/End: Original strand, 21249767 - 21249813
Alignment:
Q  200 ttccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||||||| | || ||||||| ||||||||||||||||||||||||    
T  21249767 ttccaggttcagtctcatcctacattctttcctaatcattattagac 21249813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 246
Target Start/End: Original strand, 22627125 - 22627167
Alignment:
Q  204 aggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||| |||| ||||||| ||||||||||||||||||||||||    
T  22627125 aggttcaatctcatcctacattctttcctaatcattattagac 22627167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 131
Target Start/End: Complemental strand, 13507957 - 13507920
Alignment:
Q  94 ttcaactctcaacaactcgtgcaacaaaggtcgcaaaa 131  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  13507957 ttcaactctcaacaactcgtgcgacaaagatcgcaaaa 13507920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 131
Target Start/End: Complemental strand, 13597489 - 13597452
Alignment:
Q  94 ttcaactctcaacaactcgtgcaacaaaggtcgcaaaa 131  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  13597489 ttcaactctcaacaactcgtgcgacaaagatcgcaaaa 13597452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 246
Target Start/End: Original strand, 23648949 - 23648985
Alignment:
Q  210 aatcacatcctagattctttcctaatcattattagac 246  Q
    |||| ||||||| ||||||||||||||||||||||||    
T  23648949 aatctcatcctacattctttcctaatcattattagac 23648985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 125; Significance: 2e-64; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 3 - 246
Target Start/End: Complemental strand, 20638247 - 20637983
Alignment:
Q  3 ttatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaactct 102  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| | |||| |||| |||||||||||||  |||  |||||||| ||||||||||    
T  20638247 ttatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaacatcatcattaagtcttaatgttatcccaaggttcaactct 20638148  T
Q  103 caacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtcac---------------------tcgccgtgtcgagttcaggtc 181  Q
    | |||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||                     |||||||| ||||||||||||    
T  20638147 cgacaactcgtgcaacaaaggtcgcaaaatctaacaaggcactctgtttctgggtcactcgcgaggtgagagcctttgctcgccgtggcgagttcaggtc 20638048  T
Q  182 agaatcccacaagtttcattccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||    
T  20638047 agaatcccacaagtttcattccaggttcaatctcatcctacattctttcctaatcattattagac 20637983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 20360926 - 20360660
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||  | |||| |||| |||||||||||||  ||||||| || || ||||||      
T  20360926 cattatatcacatcataatcaacaacaacacatcttaaacagcttcacatattataattaacctcatcattaagtcttaatactacccaaaggttcaatc 20360827  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtcac---------------------tcgccgtgtcgagttcagg 179  Q
    ||||||||||||||||||||||||||||||| |||||||| |||| ||||| ||||||||                     ||||| || ||||||||||    
T  20360826 ctcaacaactcgtgcaacaaaggtcgcaaaacctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctcagctcgccatggcgagttcagg 20360727  T
Q  180 tcagaatcccacaagtttcattccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||    
T  20360726 tcagaatcccacaagtttcattccaggttcaatctcatcctacattctttcctaatcattattagac 20360660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 25629321 - 25629157
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| | |||| ||||  |||||||||||| |||||||| ||||| ||||||||    
T  25629321 cattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaacaacatcattaagtctcaatactaccccaaggttcaact 25629222  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaat-ctaacaagacactttgtttttgggtcactcgc 164  Q
    || |||||||||||||||||| |||||||||| |||||||| |||| ||||| ||||||||||||    
T  25629221 cttaacaactcgtgcaacaaaagtcgcaaaatcctaacaaggcactctgtttctgggtcactcgc 25629157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 18409793 - 18409632
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||  | |||| |||| ||||||||||||| |||||||| || || ||||||||    
T  18409793 cattatatcacatcataatcaacatcaacacatcttaaacagcttcacatattataattaacatcatcattaagtctcaatactaccctaaggttcaact 18409694  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaat-ctaacaagacactttgtttttgggtcact 161  Q
    ||||| |||||||||||||||||||| ||||| |||||||| |||| ||||| |||||||||    
T  18409693 ctcaataactcgtgcaacaaaggtcgtaaaatcctaacaaggcactctgtttctgggtcact 18409632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 29060695 - 29060859
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    ||||||||| ||||||||||||||||||| |||||||||||||||||||| | |||| |||  ||||||||||||| |||||||| ||||| ||||| ||    
T  29060695 cattatatctcatcataatcaacatcaacacatcttaaacagcttcacagattataattaatatcatcattaagtctcaatactaccccaaggttcagct 29060794  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaat-ctaacaagacactttgtttttgggtcactcgc 164  Q
    || | ||||||||||||||||||||||||||| |||||||| |||| ||||| ||||||||||||    
T  29060795 cttagcaactcgtgcaacaaaggtcgcaaaatcctaacaaggcactctgtttctgggtcactcgc 29060859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 17287762 - 17287601
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    |||||| ||| | |||||||||| ||||| |||||||||||||||||||||| |||| |||| || |||||||||| |||| ||| ||||| ||||||||    
T  17287762 cattatgtcataacataatcaacctcaacacatcttaaacagcttcacaggttataattaacatcctcattaagtctcaatgctaccccaaggttcaact 17287663  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtcactc 162  Q
    |||||||||||||||||||||| | |||||  ||||||||||||| ||||| ||||||||||    
T  17287662 ctcaacaactcgtgcaacaaagatagcaaaccctaacaagacactctgtttctgggtcactc 17287601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 22780193 - 22780030
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    |||||||||||| |||||||||||||||| |||||||||||||||||||| | || | |||| |||||||||||||   |||||| ||||| ||||||||    
T  22780193 cattatatcacaacataatcaacatcaacacatcttaaacagcttcacagattatgattaacatcatcattaagtctttatactaccccaaggttcaact 22780094  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtcactcgc 164  Q
    |||  ||||| |||||||||||||| ||||| |||||| |||||| ||||| | ||| ||||||    
T  22780093 ctcggcaacttgtgcaacaaaggtcacaaaacctaacaggacactctgtttctaggttactcgc 22780030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 4 - 164
Target Start/End: Original strand, 20593931 - 20594092
Alignment:
Q  4 tatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaactctc 103  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| | |||| || | | ||||||||||| |||||||| ||||| ||||||| ||     
T  20593931 tatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattatcattatcattaagtctcaatactaccccaaggttcaaccctt 20594030  T
Q  104 aacaactcgtgcaacaaaggtcgcaaaat-ctaacaagacactttgtttttgggtcactcgc 164  Q
    ||||||| |||| ||| || ||||||||| |||||||| |||| ||||| | ||||||||||    
T  20594031 aacaacttgtgcgacacagatcgcaaaatcctaacaaggcactctgtttctaggtcactcgc 20594092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 19303507 - 19303345
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||||| | |||| |||| |||||||||| || || | ||| ||||| ||||||||    
T  19303507 cattatatcacatcataatcaacatcaacacatcttcaacagcttcacagattataattaacatcatcattaattctcagtgctaccccaaggttcaact 19303408  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaat-ctaacaagacactttgtttttgggtcactc 162  Q
    || | ||||| |||| ||| || ||||||||| |||||||| |||| ||||| ||||||||||    
T  19303407 cttagcaacttgtgcgacatagatcgcaaaatcctaacaaggcactctgtttctgggtcactc 19303345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 87 - 243
Target Start/End: Complemental strand, 18821699 - 18821522
Alignment:
Q  87 cccaaagttcaactctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtcactcgc---------------------c 165  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||||||||||| |||| ||||| |||||| |||||                     |    
T  18821699 cccaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaaatctaacaagtcactctgtttctgggtcgctcgcgaggcgagagcctctgctcgcc 18821600  T
Q  166 gtgtcgagttcaggtcagaatcccacaagtttcattccaggtttaatcacatcctagattctttcctaatcattatta 243  Q
     || ||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||||| |||||||||||||||    
T  18821599 atggcgagttcaggtcagaatcccacaagtttcattccaggttcaatctcatcctacattctctcctaatcattatta 18821522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 16920599 - 16920436
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    ||||||| |||||||||||||||| ||||  ||||||  |||||||| || | |||  |||| ||||  |||||||  ||| ||| || |  ||||||||    
T  16920599 cattataccacatcataatcaacaacaacttatcttattcagcttcatagattatagttaacctcattcttaagtcttaattctacccaagggttcaact 16920500  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtcactcgc 164  Q
    ||| | || |||||||||||||||||||||||| |||||| |||||||||| ||||||||||||    
T  16920499 ctcgagaaatcgtgcaacaaaggtcgcaaaatccaacaagtcactttgtttctgggtcactcgc 16920436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 22831657 - 22831820
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    ||||||| |||||||||||||||| ||||  ||||||  ||||||||||| | |||  |||| ||||  | |||||  ||| ||| || |  ||||||||    
T  22831657 cattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaact 22831756  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtcactcgc 164  Q
    ||| || | |||||| ||||||||||||||||| |||||| |||| ||||| | ||||||||||    
T  22831757 ctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgc 22831820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 170 - 246
Target Start/End: Complemental strand, 16920409 - 16920333
Alignment:
Q  170 cgagttcaggtcagaatcccacaagtttcattccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||||||||||||||| ||| |||||| |||||||||  ||||  |||||| ||||||| ||||||||||||||||    
T  16920409 cgagttcaggtcagaattccataagtttaattccaggtacaatcttatcctacattcttttctaatcattattagac 16920333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 161 - 246
Target Start/End: Complemental strand, 17287581 - 17287485
Alignment:
Q  161 tcgccgtgtcgagttcaggtcagaatcccacaagtttcattc-----------caggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    |||||||| |||||| ||||||||||||||||||||||||||           |||||  |||||||||||| ||||||||||||||||||||||||    
T  17287581 tcgccgtggcgagtttaggtcagaatcccacaagtttcattctacaatctttccaggtacaatcacatcctacattctttcctaatcattattagac 17287485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 160 - 246
Target Start/End: Original strand, 22831837 - 22831923
Alignment:
Q  160 ctcgccgtgtcgagttcaggtcagaatcccacaagtttcattccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||||||| ||||||||||| |||||||||  ||||| |||||||||| |||| | ||||| ||||||  ||||||| ||||||||    
T  22831837 ctcgccgtggcgagttcaggttagaatcccatcagtttaattccaggttcaatctcgtcctatattcttcactaatcaatattagac 22831923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 113 - 162
Target Start/End: Original strand, 11185769 - 11185818
Alignment:
Q  113 tgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtcactc 162  Q
    |||||||||||||||||||||||||||| |||| ||||| ||||||||||    
T  11185769 tgcaacaaaggtcgcaaaatctaacaagtcactatgtttctgggtcactc 11185818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 163 - 246
Target Start/End: Complemental strand, 22780010 - 22779916
Alignment:
Q  163 gccgtgtcgagttcaggtcagaatcccacaagtttcattc-----------caggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    |||||| |||||| ||||||||||||||||||||||||||           |||||| |||| ||||||| ||||||||||||||||||||||||    
T  22780010 gccgtggcgagtttaggtcagaatcccacaagtttcattctacaatctttccaggttcaatctcatcctacattctttcctaatcattattagac 22779916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 160 - 242
Target Start/End: Original strand, 11185837 - 11185919
Alignment:
Q  160 ctcgccgtgtcgagttcaggtcagaatcccacaagtttcattccaggtttaatcacatcctagattctttcctaatcattatt 242  Q
    ||||||||| ||||||||||| ||||||||| |||||| |||||||||| |||| | ||||| | ||||  ||||||| ||||    
T  11185837 ctcgccgtggcgagttcaggttagaatcccataagtttaattccaggttcaatctcgtcctacactcttcactaatcaatatt 11185919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 133
Target Start/End: Original strand, 18456956 - 18457002
Alignment:
Q  87 cccaaagttcaactctcaacaactcgtgcaacaaaggtcgcaaaatc 133  Q
    ||||| |||||||||||||| |||||||| |||||| ||||||||||    
T  18456956 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatc 18457002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 131
Target Start/End: Original strand, 25644558 - 25644607
Alignment:
Q  82 actatcccaaagttcaactctcaacaactcgtgcaacaaaggtcgcaaaa 131  Q
    |||| ||||| |||||||||||| |||||||||| |||||| ||||||||    
T  25644558 actaccccaaggttcaactctcagcaactcgtgcgacaaagatcgcaaaa 25644607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 121; Significance: 4e-62; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 23654352 - 23654099
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    ||||||||||||||||||| |||| |||| |||||||||||||||||||| | |||| |||| || ||||||||||  ||| ||| || || ||||||||    
T  23654352 cattatatcacatcataattaacaacaacacatcttaaacagcttcacagattataattaacctcttcattaagtcttaatgctacccaaaggttcaact 23654253  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtcac--------tcgccgtgtcgagttcaggtcagaatcccaca 192  Q
    ||| |||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||        |||||||| |||||||| ||||||||||||      
T  23654252 ctcgacaactcgtgcaacaaaggtcgcaaaatctaacaagtcactctgtttctgggtcactcgcgtgctcgccgtggcgagttcaagtcagaatcccaac 23654153  T
Q  193 agtttcattccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||| |||||||||| |||| ||||||| ||||||||||||||||||||||||    
T  23654152 agtttaattccaggttcaatctcatcctacattctttcctaatcattattagac 23654099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 23076597 - 23076760
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||| | |||| |||| ||||||| || ||||||||||| ||||||||||||||    
T  23076597 cattatatcacatcataatcaacatcaacacagcttaaacagcttcacagattataattaacatcatcataaaatcccaatactaccccaaagttcaact 23076696  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtcactcgc 164  Q
    ||||||||||||||||||||||||||||||| |||||||| |||| ||||| ||||| ||||||    
T  23076697 ctcaacaactcgtgcaacaaaggtcgcaaaacctaacaaggcactctgtttctgggtaactcgc 23076760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 22738146 - 22737983
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| | |||| |||| || ||||||||||  ||||||| ||||| |||||| |    
T  22738146 cattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaacatcctcattaagtcttaatactaccccaaggttcaatt 22738047  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtcactcgc 164  Q
    ||||||||||||||||||||||||||||||| |||||||| |||| ||||| | ||||||||||    
T  22738046 ctcaacaactcgtgcaacaaaggtcgcaaaacctaacaaggcactctgtttctaggtcactcgc 22737983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 23286016 - 23286282
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||| | |||| |||| || ||||||||||  ||||||| || || ||||||||    
T  23286016 cattatatcacatcataatcaacaacaacacatcttaaacagcttcacagattataattaacatcttcattaagtcttaatactacccaaaggttcaact 23286115  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtca---------------------ctcgccgtgtcgagttcagg 179  Q
    ||||||||||| |||||||||||||||||||||||||||| |||| ||||| | |||||                     ||||||||| ||||||||||    
T  23286116 ctcaacaactcatgcaacaaaggtcgcaaaatctaacaagtcactctgtttctaggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcagg 23286215  T
Q  180 tcagaatcccacaagtttcattccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||| |||| ||||| |||||||||| ||| |||| ||||||| ||||||||||||||||||||||||    
T  23286216 tcataatctcacaattttcattccatgttcaatctcatcctacattctttcctaatcattattagac 23286282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 23060668 - 23060815
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||  | |||| |||| |||||||||||||||||||||| |||||||||||| |    
T  23060668 cattatatcacatcataatcaacatcaacacatcttaaacagcttcaca-attataattaacatcatcattaagtcccaatactaccccaaagttcaatt 23060766  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtt 150  Q
    |||||||||||||| |||||||||||||||| |||||||| |||| ||||    
T  23060767 ctcaacaactcgtg-aacaaaggtcgcaaaacctaacaaggcactctgtt 23060815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 27753730 - 27753890
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||||  | |||| |||| |||||||||||||  ||| |||||||||  |||||||    
T  27753730 cattatatcacatcataatcaacatcaacacatcttaaacagtttcacatattataattaacatcatcattaagtcttaatgctatcccaagcttcaact 27753829  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtcact 161  Q
    ||| |||||||||||||| ||||||||||||||||||||| |||| ||||| |||||||||    
T  27753830 ctcgacaactcgtgcaacgaaggtcgcaaaatctaacaaggcactctgtttctgggtcact 27753890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 22337270 - 22337434
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    |||||||||||||||||||||||||||||  |||||||||| |||||||  | |||| |||| |||||||||||||  |||||||  |||| ||||||||    
T  22337270 cattatatcacatcataatcaacatcaacatatcttaaacaacttcacaaattataattaacatcatcattaagtcttaatactactccaaggttcaact 22337369  T
Q  101 ctcaacaactcgtgcaacaaaggtcgc-aaaatctaacaagacactttgtttttgggtcactcgc 164  Q
    ||||||||||||||||||||||||| | |||| |||||||||| || ||||| ||||||||||||    
T  22337370 ctcaacaactcgtgcaacaaaggtcacaaaaacctaacaagactctctgtttctgggtcactcgc 22337434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 23660177 - 23660339
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| |||  | |||| |||| |||||| |||||| |||||||| ||||| ||||||||    
T  23660177 cattatatcacatcataatcaacatcaacacatcttaaacagctttacaaattataattaacatcatcaataagtctcaatactaccccaaggttcaact 23660276  T
Q  101 ctcaacaactcgtgcaacaaaggtcgc-aaaatctaacaagacactttgtttttgggtcactc 162  Q
    ||||| ||||||||||| ||||||| | |||| |||||||| |||| ||||| ||||||||||    
T  23660277 ctcaataactcgtgcaataaaggtcacaaaaacctaacaaggcactctgtttctgggtcactc 23660339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 22731200 - 22731037
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatacta-tcccaaagttcaac 99  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| | |||| |||| || ||||||||||  |||||||  ||||| ||||||     
T  22731200 cattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaacatcctcattaagtcttaatactacccccaaggttcaat 22731101  T
Q  100 tctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtcactcg 163  Q
    | |||||| |||||||||||||| |||||||| |||||||| |||| ||||| ||||| |||||    
T  22731100 tatcaacagctcgtgcaacaaagatcgcaaaacctaacaaggcactctgtttctgggtgactcg 22731037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 20309260 - 20309526
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    ||||||| |||||||||||||||| ||||  ||||||  ||||||||||| | |||  |||| ||||  |||||||  ||| ||| || |  ||||||||    
T  20309260 cattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattcttaagtcttaatcctacccaagggttcaact 20309359  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtcactcg---------------------ccgtgtcgagttcagg 179  Q
    ||| |||| ||||||||||| ||||||||||||||||||| |||||||||| |||||||||||                     ||||| ||||||||||    
T  20309360 ctcgacaaatcgtgcaacaagggtcgcaaaatctaacaagtcactttgtttctgggtcactcgcgaggcgagagcctctgctcaccgtggcgagttcagg 20309459  T
Q  180 tcagaatcccacaagtttcattccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    |||||||||||||||||| |||||||||| |||| ||||||| ||||||||||||||||||||||||    
T  20309460 tcagaatcccacaagtttaattccaggttcaatctcatcctacattctttcctaatcattattagac 20309526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 38082 - 37919
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    |||||||||||||||||||||||| ||||   ||||| ||||||||| || | |||| |||| ||||  |||||||  ||| ||| || || ||||||||    
T  38082 cattatatcacatcataatcaacaacaacatgtcttatacagcttcagagattataattaacctcattgttaagtcttaatcctacccaaaggttcaact 37983  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtcactcgc 164  Q
    ||| |||||||||||||||||||||||||| ||||||||| |||| ||||| |||||| |||||    
T  37982 ctcgacaactcgtgcaacaaaggtcgcaaagtctaacaagtcactatgtttctgggtcgctcgc 37919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 298780 - 298617
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    ||||||||||||||||||| || | |||| ||||||| |||||||||||  | |||  |||| || ||||||||||  ||| ||| || || ||| ||      
T  298780 cattatatcacatcataattaataacaacacatcttatacagcttcacatattatagttaacctcttcattaagtcttaatgctacccaaaggtttaatc 298681  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtcactcgc 164  Q
    |||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||||||    
T  298680 ctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagtcactctgtttctgggtcactcgc 298617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 87 - 164
Target Start/End: Complemental strand, 32451809 - 32451732
Alignment:
Q  87 cccaaagttcaactctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtcactcgc 164  Q
    ||||| ||||| ||||| |||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||||||    
T  32451809 cccaaggttcatctctcgacaactcgtgcaacaaaggtcgcaaaatctaacaagtcactctgtttctgggtcactcgc 32451732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 160 - 246
Target Start/End: Complemental strand, 37902 - 37816
Alignment:
Q  160 ctcgccgtgtcgagttcaggtcagaatcccacaagtttcattccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||||||| ||||||||||| |||||| ||||||||| |||||||||| |||| ||||||| ||  ||||||||||||||||||||    
T  37902 ctcgccgtggcgagttcaggttagaatctcacaagtttaattccaggttcaatctcatcctacatcttttcctaatcattattagac 37816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 159 - 246
Target Start/End: Complemental strand, 298601 - 298504
Alignment:
Q  159 actcgccgtgtcgagttcaggtcagaatcccacaagtttca----------ttccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    |||||||||| ||||||||||||||||||||||||||||||          ||||||||| |||| ||||||| ||||||||||||||||||||||||    
T  298601 actcgccgtggcgagttcaggtcagaatcccacaagtttcattctaaatctttccaggttcaatctcatcctatattctttcctaatcattattagac 298504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 160 - 246
Target Start/End: Original strand, 27753910 - 27754007
Alignment:
Q  160 ctcgccgtgtcgagttcaggtcagaatcccacaagtttcattc-----------caggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||||||| |||||||||||||||||||||||||||||||||           |||||| |||| ||||||| ||||||||||||||||||||||||    
T  27753910 ctcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatctttccaggttcaatctcatcctacattctttcctaatcattattagac 27754007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 164 - 246
Target Start/End: Complemental strand, 22731015 - 22730922
Alignment:
Q  164 ccgtgtcgagttcaggtcagaatcccacaagtttcattc-----------caggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||| |||||||||||||||||||||||||||||||||           |||||| |||| ||||||| ||||||||||||||||||||||||    
T  22731015 ccgtggcgagttcaggtcagaatcccacaagtttcattctacaatctttccaggttcaatctcatcctacattctttcctaatcattattagac 22730922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 160 - 202
Target Start/End: Complemental strand, 32451715 - 32451673
Alignment:
Q  160 ctcgccgtgtcgagttcaggtcagaatcccacaagtttcattc 202  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  32451715 ctcgccgtggcgagttcaggtcagaatcccacaagtttcattc 32451673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 87 - 133
Target Start/End: Original strand, 19672068 - 19672114
Alignment:
Q  87 cccaaagttcaactctcaacaactcgtgcaacaaaggtcgcaaaatc 133  Q
    ||||| ||||||||||||||||||||||| |||||| ||||||||||    
T  19672068 cccaaggttcaactctcaacaactcgtgcgacaaagatcgcaaaatc 19672114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 200 - 246
Target Start/End: Original strand, 22337501 - 22337547
Alignment:
Q  200 ttccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||||||| |||| ||||||| ||||||||||||||||||||||||    
T  22337501 ttccaggttcaatctcatcctacattctttcctaatcattattagac 22337547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 160 - 245
Target Start/End: Complemental strand, 22737966 - 22737870
Alignment:
Q  160 ctcgccgtgtcgagttcaggtcagaatcccacaagtttcattcca-----------ggtttaatcacatcctagattctttcctaatcattattaga 245  Q
    ||||||||| ||||||||| ||||||||||||||||||||||| |           |||| |||| ||||||| |||||||||||||||||||||||    
T  22737966 ctcgccgtggcgagttcagttcagaatcccacaagtttcattctacaatctttctaggttcaatctcatcctacattctttcctaatcattattaga 22737870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 133
Target Start/End: Complemental strand, 23708584 - 23708452
Alignment:
Q  2 attatatcacatcataatcaacatcaacgcatctta-aacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    |||||||||||| |||| |||||||||  ||||||| ||||||||||||| |||| | |||  |||| |  ||    || ||| | ||||| ||||||||    
T  23708584 attatatcacattataaacaacatcaattcatcttataacagcttcacagatcatcattaatatcataaacaatcttcattacgaccccaaggttcaact 23708485  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaatc 133  Q
     |||||||||||||| |||||| ||||||||||    
T  23708484 atcaacaactcgtgcgacaaagatcgcaaaatc 23708452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 246
Target Start/End: Original strand, 23660408 - 23660454
Alignment:
Q  200 ttccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||||||| |||| ||| ||| ||||||||||||||||||||||||    
T  23660408 ttccaggttcaatctcattctacattctttcctaatcattattagac 23660454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 117; Significance: 1e-59; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 22532424 - 22532588
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||| |||||||| | ||| ||||||||    
T  22532424 cattatatcacatcataatcaacatcaacacatcttaaacagcttcacagttcataaataacatcatcattaagtctcaatactacctcaaggttcaact 22532523  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaat-ctaacaagacactttgtttttgggtcactcgc 164  Q
    ||||||| |||||||||||||||||||||||| |||||||| |||| ||||||||||||||||||    
T  22532524 ctcaacagctcgtgcaacaaaggtcgcaaaatcctaacaagtcactctgtttttgggtcactcgc 22532588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 50210179 - 50210015
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| | |||| |||| ||||||||||||| |||||||| || || ||||||||    
T  50210179 cattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaacatcatcattaagtctcaatactacccaaaggttcaact 50210080  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaat-ctaacaagacactttgtttttgggtcactcgc 164  Q
    |||||||||||||||||||||||||||||||| |||||||| |||| ||||| ||||||||||||    
T  50210079 ctcaacaactcgtgcaacaaaggtcgcaaaatcctaacaaggcactctgtttctgggtcactcgc 50210015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 22356141 - 22355874
Alignment:
Q  1 cattatatcacatcataatcaa-catcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaac 99  Q
    |||||||||||||||||||||| ||||||| ||||||||| |||||||||| | |||| |||| |||||||||||||  ||| ||||||||| |||||||    
T  22356141 cattatatcacatcataatcaatcatcaacacatcttaaatagcttcacagattataattaacatcatcattaagtcttaatgctatcccaaggttcaac 22356042  T
Q  100 tctcaacaactcgtgcaacaaaggtcgcaaaatctaacaa-gacactttgtttttgggtca--------------------ctcgccgtgtcgagttcag 178  Q
    |||| ||||||||||||||||||||| ||||||||||||| | |||| ||||| | |||||                    ||||||||| |||||||||    
T  22356041 tctcgacaactcgtgcaacaaaggtctcaaaatctaacaatgtcactctgtttctaggtcactcgcgatgcgaagcctctgctcgccgtggcgagttcag 22355942  T
Q  179 gtcagaatcccacaagtttcattccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||||||||||||| |||||||||||||| |||| ||||||| ||||||||||||||||||||||||    
T  22355941 gtcagaatcccacaaatttcattccaggttcaatctcatcctacattctttcctaatcattattagac 22355874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 22357827 - 22357560
Alignment:
Q  1 cattatatcacatcataatcaa-catcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaac 99  Q
    |||||||||||||||||||||| ||||||| ||||||||| |||||||||| | |||| |||| |||||||||||||  ||| ||||||||| |||||||    
T  22357827 cattatatcacatcataatcaatcatcaacacatcttaaatagcttcacagattataattaacatcatcattaagtcttaatgctatcccaaggttcaac 22357728  T
Q  100 tctcaacaactcgtgcaacaaaggtcgcaaaatctaacaa-gacactttgtttttgggtca--------------------ctcgccgtgtcgagttcag 178  Q
    |||| ||||||||||||||||||||| ||||||||||||| | |||| ||||| | |||||                    ||||||||| |||||||||    
T  22357727 tctcgacaactcgtgcaacaaaggtctcaaaatctaacaatgtcactctgtttctaggtcactcgcgatgcgaagcctctgctcgccgtggcgagttcag 22357628  T
Q  179 gtcagaatcccacaagtttcattccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||||||||||||| |||||||||||||| |||| ||||||| ||||||||||||||||||||||||    
T  22357627 gtcagaatcccacaaatttcattccaggttcaatctcatcctacattctttcctaatcattattagac 22357560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 27250695 - 27250429
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||| | |||| |||| || |||||||||  |||| ||| || || ||||||||    
T  27250695 cattatatcacatcataatcaacaacaacacatcttaaacagcttcacagattataattaacctcttcattaagtatcaatgctacccaaaggttcaact 27250596  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtcactcgc---------------------cgtgtcgagttcagg 179  Q
    ||| |||||||||||||||||||||||||||| |||||||  ||| ||||| || |||||||||                     |||| ||||||||||    
T  27250595 ctcgacaactcgtgcaacaaaggtcgcaaaatataacaagggactctgtttctgtgtcactcgcgaggcgagagcctctgctcgacgtggcgagttcagg 27250496  T
Q  180 tcagaatcccacaagtttcattccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||||||||||| ||||||||||||||| |||| ||||||| ||||||||||||||||||||||||    
T  27250495 tcagaatcccacaggtttcattccaggttcaatcccatcctacattctttcctaatcattattagac 27250429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 34509935 - 34510098
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||| || | |||| |||| ||||||||||||| |||||||| ||||| |||||||     
T  34509935 cattatatcacatcatattcaacatcaacacatcttaaacagcttcaaagattataattaacatcatcattaagtctcaatactaccccaaggttcaacc 34510034  T
Q  101 ctcaacaactcgtgcaacaaaggtcgc-aaaatctaacaagacactttgtttttgggtcactcg 163  Q
    ||||||||||||||||||||||||||| |||| |||||| |||||| ||||| |||||||||||    
T  34510035 ctcaacaactcgtgcaacaaaggtcgcaaaaacctaacatgacactctgtttctgggtcactcg 34510098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 21026835 - 21027101
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||| | |||| |||| || ||||||||||  ||| ||| || || ||| ||      
T  21026835 cattatatcacatcataatcaacagcaacacatcttaaacagcttcacagattataattaacctcttcattaagtcttaatgctacccaaaggtttaatc 21026934  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtca---------------------ctcgccgtgtcgagttcagg 179  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||                     ||||||||| |||||| |||    
T  21026935 ctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagtcactttgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagtttagg 21027034  T
Q  180 tcagaatcccacaagtttcattccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    |||||| | |||||||||||||||||||| |||| ||||||| |||||| |||||||||||||||||    
T  21027035 tcagaacctcacaagtttcattccaggttcaatctcatcctacattcttacctaatcattattagac 21027101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 22354538 - 22354378
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| | |||| |||| || ||||||||||  ||||||| |  || |||||| |    
T  22354538 cattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaacatcctcattaagtcttaatactacctaaaggttcaatt 22354439  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtcact 161  Q
    ||||||||||||||||||||||||||||||| |||||||| |||| ||||| |||||||||    
T  22354438 ctcaacaactcgtgcaacaaaggtcgcaaaacctaacaagtcactctgtttctgggtcact 22354378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 20135342 - 20135506
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    |||||||||| |||||||| ||||||||| |||||||||||||||||||| | |||| ||||  |||||||| |||  | ||||| || || ||||||||    
T  20135342 cattatatcatatcataatgaacatcaacacatcttaaacagcttcacagattataattaacaacatcattaggtcttactactaccctaaggttcaact 20135441  T
Q  101 ctcaacaactcgtgcaacaaaggtcgca-aaatctaacaagacactttgtttttgggtcactcgc 164  Q
    ||||||||||||| |||||||||||||| ||| |||||||| |||| ||||| ||||| ||||||    
T  20135442 ctcaacaactcgtacaacaaaggtcgcataaacctaacaagtcactctgtttctgggttactcgc 20135506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 159 - 246
Target Start/End: Complemental strand, 38801178 - 38801091
Alignment:
Q  159 actcgccgtgtcgagttcaggtcagaatcccacaagtttcattccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    |||||||||| |||||||||||||||||||||||||||  |||||||||| |||||||||||| ||||||||||||||||||||||||    
T  38801178 actcgccgtggcgagttcaggtcagaatcccacaagttcaattccaggttcaatcacatcctacattctttcctaatcattattagac 38801091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 101 - 246
Target Start/End: Complemental strand, 20847085 - 20846919
Alignment:
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtcac---------------------tcgccgtgtcgagttcagg 179  Q
    |||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||                     |||||||| ||||||||||    
T  20847085 ctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagtcactctgtttctgggtcactcgcgaggcaagagcctctgctcgccgtggcgagttcagg 20846986  T
Q  180 tcagaatcccacaagtttcattccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||| || | |||||||||||||||||||| |||| ||||||| |||||| |||||||||||||||||    
T  20846985 tcaaaacctcacaagtttcattccaggttcaatctcatcctacattcttacctaatcattattagac 20846919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 48603669 - 48603718
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacag 50  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  48603669 cattatatcacatcataatcaacaacaacacatcttaaacagcttcacag 48603718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 159 - 202
Target Start/End: Complemental strand, 22354359 - 22354316
Alignment:
Q  159 actcgccgtgtcgagttcaggtcagaatcccacaagtttcattc 202  Q
    |||||||||| |||||||||||||||||||||||||||||||||    
T  22354359 actcgccgtggcgagttcaggtcagaatcccacaagtttcattc 22354316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 38801357 - 38801207
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    ||||||| |||||| ||||||||| ||||  ||||||  ||||||||||  | |||  |||  |||| ||||||||  ||| ||| || |  ||||||||    
T  38801357 cattataacacatcgtaatcaacaacaacatatcttattcagcttcacaaattatagttaatctcattattaagtcttaatcctacccaagggttcaact 38801258  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgttt 151  Q
      | ||||||||| |||||||||||||||||||||||||| |||| |||||    
T  38801257 tccgacaactcgtacaacaaaggtcgcaaaatctaacaagtcactctgttt 38801207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 87 - 133
Target Start/End: Original strand, 16758892 - 16758938
Alignment:
Q  87 cccaaagttcaactctcaacaactcgtgcaacaaaggtcgcaaaatc 133  Q
    ||||| ||||||||||||||||||||||| |||||| ||||||||||    
T  16758892 cccaaggttcaactctcaacaactcgtgcgacaaagatcgcaaaatc 16758938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 200 - 246
Target Start/End: Original strand, 22532655 - 22532701
Alignment:
Q  200 ttccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||||||| |||| ||||||| ||||||||||||||||||||||||    
T  22532655 ttccaggttcaatctcatcctacattctttcctaatcattattagac 22532701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 200 - 246
Target Start/End: Original strand, 34510166 - 34510212
Alignment:
Q  200 ttccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||||||| |||| ||||||| ||||||||||||||||||||||||    
T  34510166 ttccaggttcaatctcatcctacattctttcctaatcattattagac 34510212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 246
Target Start/End: Complemental strand, 50209998 - 50209902
Alignment:
Q  160 ctcgccgtgtcgagttcaggtcagaatcccacaagtttcattc----------caggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||||||| ||||||||||||||||| ||| |||||||||||          |||||| |||| ||| ||| ||||||||||||||||||||||||    
T  50209998 ctcgccgtggcgagttcaggtcagaattccaaaagtttcattctaaatctttccaggttcaatctcattctacattctttcctaatcattattagac 50209902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 133
Target Start/End: Original strand, 433248 - 433294
Alignment:
Q  87 cccaaagttcaactctcaacaactcgtgcaacaaaggtcgcaaaatc 133  Q
    ||||| |||||||||||||| |||||||| |||||| ||||||||||    
T  433248 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatc 433294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 246
Target Start/End: Original strand, 20135573 - 20135619
Alignment:
Q  200 ttccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||||||  |||| ||||||| ||||||||||||||||||||||||    
T  20135573 ttccaggtccaatctcatcctacattctttcctaatcattattagac 20135619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 22468662 - 22468614
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacag 50  Q
    ||||||||||||||||||| | ||||| | ||||||||||||||||||||    
T  22468662 cattatatcacatcataatta-catcagcacatcttaaacagcttcacag 22468614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 131
Target Start/End: Original strand, 21342334 - 21342378
Alignment:
Q  87 cccaaagttcaactctcaacaactcgtgcaacaaaggtcgcaaaa 131  Q
    ||||| ||||||||||||||||||||||| |||| | ||||||||    
T  21342334 cccaaggttcaactctcaacaactcgtgcgacaacgatcgcaaaa 21342378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 131
Target Start/End: Original strand, 21347199 - 21347243
Alignment:
Q  87 cccaaagttcaactctcaacaactcgtgcaacaaaggtcgcaaaa 131  Q
    ||||| ||||||||||||||||||||||| |||| | ||||||||    
T  21347199 cccaaggttcaactctcaacaactcgtgcgacaacgatcgcaaaa 21347243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 115; Significance: 2e-58; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 12902912 - 12903178
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||| | |||| |||| || ||||||||||  ||| ||| || || ||||||||    
T  12902912 cattatatcacatcataatcaacaacaacacatcttaaacagcttcacagattataattaacctcttcattaagtcttaatcctacccaaaggttcaact 12903011  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtc---------------------actcgccgtgtcgagttcagg 179  Q
    ||||||| |||||||||||||||||||||||||||||||| |||| ||||| ||||||                     |||||||||| ||||||||||    
T  12903012 ctcaacagctcgtgcaacaaaggtcgcaaaatctaacaaggcactctgtttctgggtcactcgcgaggcgggagcctctactcgccgtggcgagttcagg 12903111  T
Q  180 tcagaatcccacaagtttcattccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||    
T  12903112 tcagaatcccacaagtttcattccaggttcaatctcatcctacattctttcctaatcattattagac 12903178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 16239936 - 16239736
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    |||||||||| |||||||||||||||||| |||||||||||||||| ||| | |||| |||| |||||||||||||  ||||||| ||||||||||||||    
T  16239936 cattatatcatatcataatcaacatcaacacatcttaaacagcttcgcagattataattaacatcatcattaagtcttaatactaccccaaagttcaact 16239837  T
Q  101 ctcaacaactcgtgcaacaaaggtcgc-aaaatctaacaagacactttgtttttgggtcactcgccgtgtcgagttcaggtcagaatcccacaagtttca 199  Q
    ||||||||||||||||||||||||||| |||| |||||||| |||| ||||| ||||||||||| || | ||||||||||| ||||| ||||||||||||    
T  16239836 ctcaacaactcgtgcaacaaaggtcgcaaaaacctaacaagtcactctgtttctgggtcactcg-cgaggcgagttcaggttagaat-ccacaagtttca 16239739  T
Q  200 ttc 202  Q
    |||    
T  16239738 ttc 16239736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 44052984 - 44053147
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||||| | |||| |||| |||||||||||||  ||| ||||||||| ||||||||    
T  44052984 cattatatcacatcataatcaacatcagcacatcttaaacagcttcacagattataattaacatcatcattaagtcttaatgctatcccaaggttcaact 44053083  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtcactcgc 164  Q
    ||| |||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||||||    
T  44053084 ctcgacaactcgtgcaacaaaggtcgcaaaatctaacaaggcactctgtttctgggtcactcgc 44053147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 16377489 - 16377325
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| | |||| |||| ||||||||||||| |||||||| ||||| ||||||||    
T  16377489 cattatatcacatcataatcaacatcaacgcatcttaaacagctccacagattataattaacatcatcattaagtctcaatactaccccaaggttcaact 16377390  T
Q  101 ctca-acaactcgtgcaacaaaggtcgcaaaat-ctaacaagacactttgtttttgggtcactcg 163  Q
    |||| | |||||||||||||||||| ||||||| |||||||| |||| ||||| |||||||||||    
T  16377389 ctcataaaactcgtgcaacaaaggtagcaaaatcctaacaaggcactatgtttctgggtcactcg 16377325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 3096798 - 3097064
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    |||| |||| ||||||||||| || |||| |||||||||||||||||||  | |||| |||| ||||||||||||    || ||| || || ||||||||    
T  3096798 cattgtatctcatcataatcagcaacaacacatcttaaacagcttcacatattataattaacctcatcattaagtatttatcctacccaaaggttcaact 3096897  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtca---------------------ctcgccgtgtcgagttcagg 179  Q
    ||| |||||||||||||||||||||||||||||||||||| |||| ||||| |||||||                     |||||| || ||||||||||    
T  3096898 ctcgacaactcgtgcaacaaaggtcgcaaaatctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccttggcgagttcagg 3096997  T
Q  180 tcagaatcccacaagtttcattccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||    
T  3096998 tcagaatcccacaagtttcattccaggttcaatctcatcctacattctttcctaatcattattagac 3097064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 22636590 - 22636751
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    |||||||||||||||||||| |||||||| |||||||| ||||||||||| | |||| |||| || || |||||||  ||||||| ||||| |||||| |    
T  22636590 cattatatcacatcataatcgacatcaacacatcttaa-cagcttcacagattataattaacatcctcgttaagtcttaatactaccccaaggttcaatt 22636688  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtcactcg 163  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| ||||| |||||||||||    
T  22636689 ctcaacaactcgtgcaacaaaggtcgcaaaacctaacaagacactctgtttctgggtcactcg 22636751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 7089032 - 7089298
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    ||||||||||||||||||| | || |||| ||||||||||| |||||||| | |||| |||| || ||||||||||  ||| |||  | || ||||||||    
T  7089032 cattatatcacatcataattagcaacaacacatcttaaacaacttcacagattataattaacctcttcattaagtcttaatgctactcaaaggttcaact 7089131  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtca---------------------ctcgccgtgtcgagttcagg 179  Q
    ||| ||||||| ||||||||||||||||||||||||||||||||| |||||  ||||||                     |||||| || ||||||||||    
T  7089132 ctcgacaactcttgcaacaaaggtcgcaaaatctaacaagacactctgtttccgggtcactcgcgaggcgagagcctctgctcgccatggcgagttcagg 7089231  T
Q  180 tcagaatcccacaagtttcattccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||||||||| ||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||    
T  7089232 tcagaatcccataagtttcattccaggttcaatctcatcctacattctttcctaatcattattagac 7089298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 17048038 - 17047775
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||||  ||| ||   || ||||||||||  ||||||| || || ||||||||    
T  17048038 cattatatcacatcataatcaacaacaacacatcttaaacagcttcacaggttgtaattagtctcttcattaagtcttaatactacccaaaggttcaact 17047939  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtcac---------------------tcgccgtgtcgagttcagg 179  Q
    |||||||||||||||||||||||||||||| ||| ||||| |||| |||||  |||||||                     ||||| || ||||||||||    
T  17047938 ctcaacaactcgtgcaacaaaggtcgcaaagtctcacaaggcactctgtttccgggtcactcgcgaggcgagagcctctgctcgccatggcgagttcagg 17047839  T
Q  180 tcagaatcccacaagtttcattccaggtttaatcacatcctagattctttcctaatcattattag 244  Q
    ||||||||||||||||||||||||| ||| |||| ||||||| ||| ||||||||||||||||||    
T  17047838 tcagaatcccacaagtttcattcca-gttcaatctcatcctacattttttcctaatcattattag 17047775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 14038803 - 14038967
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||||||| | |||| |||  ||||||||||||| |||||||| ||||| ||||||||    
T  14038803 cattatatcacatcataatcaacatcaacacatgttaaacagcttcacagattataattaatatcatcattaagtctcaatactaccccaaggttcaact 14038902  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaat-ctaacaagacactttgtttttgggtcactcgc 164  Q
    || | ||||| |||| ||| || ||||||||| |||||||| |||| ||||| ||||||||||||    
T  14038903 cttagcaacttgtgcgacacagatcgcaaaatcctaacaaggcactctgtttctgggtcactcgc 14038967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 14053268 - 14053002
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    |||||||||||||||||||||||| ||||  |||||| || ||||||||| | |||| |||| ||||  |||||||  ||| ||| || |  ||||||||    
T  14053268 cattatatcacatcataatcaacaacaacatatcttatacggcttcacagattataattaacctcattgttaagtcttaatcctacccaagggttcaact 14053169  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtcact---------------------cgccgtgtcgagttcagg 179  Q
    ||| |||||||||||||||||||||||||||||||||||| |||| ||||| |||||||||                     |||| ||  |||||||||    
T  14053168 ctcgacaactcgtgcaacaaaggtcgcaaaatctaacaagtcactctgtttctgggtcactcgcaaggcgagagcctctgctcgccatggtgagttcagg 14053069  T
Q  180 tcagaatcccacaagtttcattccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    |||||||||||||||||| |||||| ||| |||| ||||||| ||||||||||||||||||||||||    
T  14053068 tcagaatcccacaagtttaattccaagttcaatctcatcctacattctttcctaatcattattagac 14053002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 23374325 - 23374166
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    |||||||||||||||||||||||| ||||  |||||||| ||||||| || | |||  |||| || ||||||||||  ||| ||| || || ||| ||      
T  23374325 cattatatcacatcataatcaacaacaacagatcttaaaaagcttcagagattatagttaacctcttcattaagtcttaatgctacccaaaggtttaatc 23374226  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtcac 160  Q
    |||||||||||||||||||||||| ||||||||||||||| |||| ||||| ||||||||    
T  23374225 ctcaacaactcgtgcaacaaaggttgcaaaatctaacaagtcactctgtttctgggtcac 23374166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 7893858 - 7894018
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    |||||| |||||||||||||| || ||   |||||||||||||||||||| | |||| |||| ||||| |||||||  |||| || ||||| ||||||||    
T  7893858 cattatttcacatcataatcagcaaca---catcttaaacagcttcacagattataattaacatcatcgttaagtcttaatattaccccaaggttcaact 7893954  T
Q  101 ctcaacaactcgtgcaacaaaggtcgc-aaaatctaacaagacactttgtttttgggtcactcg 163  Q
    |||  |||||| ||||||||||||||| |||| |||||||||| || ||||| |||||||||||    
T  7893955 ctcggcaactcatgcaacaaaggtcgcaaaaacctaacaagactctctgtttctgggtcactcg 7894018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 88 - 202
Target Start/End: Original strand, 6190704 - 6190810
Alignment:
Q  88 ccaaagttcaactctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtcactcgccgtgtcgagttcaggtcagaatc 187  Q
    |||| ||||||||||| ||| |||||||||||||||||||||||||||||||| |||| | ||||||||||||||||        | |||||||| ||||    
T  6190704 ccaaggttcaactctcgacagctcgtgcaacaaaggtcgcaaaatctaacaagtcactctatttttgggtcactcgc--------gatcaggtcaaaatc 6190795  T
Q  188 ccacaagtttcattc 202  Q
    |||||||||||||||    
T  6190796 ccacaagtttcattc 6190810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 102 - 164
Target Start/End: Original strand, 7798953 - 7799015
Alignment:
Q  102 tcaacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtcactcgc 164  Q
    ||||||||||||| |||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  7798953 tcaacaactcgtgaaacaaaggtcgcaaaacctaacaagacactttgtttctgggtcactcgc 7799015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 16270202 - 16270153
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacag 50  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  16270202 cattatatcacatcataatcaacatcaacacatcttaaacagcttcacag 16270153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 43 - 164
Target Start/End: Original strand, 15091093 - 15091215
Alignment:
Q  43 cttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaactctcaacaactcgtgcaacaaaggtcgcaaaatc-taacaaga 141  Q
    |||||||| | |||| |||| || |||||||||| |||||||| ||||| |||||||||| |  |||| |||| ||| || |||||||||| |||||||     
T  15091093 cttcacagattataattaacatcttcattaagtctcaatactaccccaaggttcaactcttagaaacttgtgcgacacagatcgcaaaatcctaacaagg 15091192  T
Q  142 cactttgtttttgggtcactcgc 164  Q
    |||| ||||| ||||||||||||    
T  15091193 cactctgtttctgggtcactcgc 15091215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 201
Target Start/End: Original strand, 7894036 - 7894077
Alignment:
Q  160 ctcgccgtgtcgagttcaggtcagaatcccacaagtttcatt 201  Q
    ||||||||| ||||||||||||||||||||||||||||||||    
T  7894036 ctcgccgtggcgagttcaggtcagaatcccacaagtttcatt 7894077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 200
Target Start/End: Original strand, 44053164 - 44053204
Alignment:
Q  160 ctcgccgtgtcgagttcaggtcagaatcccacaagtttcat 200  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  44053164 ctcgccgtggcgagttcaggtcagaatcccacaagtttcat 44053204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 246
Target Start/End: Original strand, 22636769 - 22636866
Alignment:
Q  160 ctcgccgtgtcgagttcaggtcagaatcccacaagtttcattc-----------caggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||||||| |||| ||| ||||||||||||||||||||||||           |||||| |||| ||||||| ||||||||||||||||||||||||    
T  22636769 ctcgccgtggcgaggtcaagtcagaatcccacaagtttcattctacaatttttccaggttcaatctcatcctacattctttcctaatcattattagac 22636866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 133
Target Start/End: Original strand, 44102446 - 44102497
Alignment:
Q  82 actatcccaaagttcaactctcaacaactcgtgcaacaaaggtcgcaaaatc 133  Q
    |||||||||| |||||||||||||| |||||||| |||||| ||||||||||    
T  44102446 actatcccaaggttcaactctcaacgactcgtgctacaaagatcgcaaaatc 44102497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 197 - 246
Target Start/End: Complemental strand, 16377260 - 16377211
Alignment:
Q  197 tcattccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    |||||||||||| |||| ||||||| ||| ||||||||||||||||||||    
T  16377260 tcattccaggttcaatctcatcctacattatttcctaatcattattagac 16377211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 202
Target Start/End: Original strand, 7799032 - 7799074
Alignment:
Q  160 ctcgccgtgtcgagttcaggtcagaatcccacaagtttcattc 202  Q
    ||||||||| ||||||||||||||||| | |||||||||||||    
T  7799032 ctcgccgtggcgagttcaggtcagaatactacaagtttcattc 7799074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 246
Target Start/End: Original strand, 15552199 - 15552245
Alignment:
Q  200 ttccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||||||  |||| ||||||| ||||||||||||||||||||||||    
T  15552199 ttccaggtccaatctcatcctacattctttcctaatcattattagac 15552245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 246
Target Start/End: Original strand, 16597031 - 16597077
Alignment:
Q  200 ttccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||||||| |||| ||| ||| ||||||||||||||||||||||||    
T  16597031 ttccaggttcaatctcattctacattctttcctaatcattattagac 16597077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 246
Target Start/End: Complemental strand, 20157025 - 20156979
Alignment:
Q  200 ttccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||||||| |||| ||||||| ||||||||||||||| ||||||||    
T  20157025 ttccaggttcaatctcatcctacattctttcctaatcaatattagac 20156979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 246
Target Start/End: Complemental strand, 22633948 - 22633902
Alignment:
Q  200 ttccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||||||| |||| ||||||| ||||||||||||||| ||||||||    
T  22633948 ttccaggttcaatctcatcctacattctttcctaatcaatattagac 22633902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 50
Target Start/End: Original strand, 14280466 - 14280507
Alignment:
Q  10 acatcataatcaacatcaacgcatctt-aaacagcttcacag 50  Q
    |||||||||||||||||||| |||||| ||||||||||||||    
T  14280466 acatcataatcaacatcaacacatcttaaaacagcttcacag 14280507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 200 - 245
Target Start/End: Complemental strand, 44928658 - 44928613
Alignment:
Q  200 ttccaggtttaatcacatcctagattctttcctaatcattattaga 245  Q
    ||||||||| |||| ||| ||| |||||||||||||||||||||||    
T  44928658 ttccaggttcaatctcattctacattctttcctaatcattattaga 44928613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 50
Target Start/End: Complemental strand, 54798721 - 54798680
Alignment:
Q  10 acatcataatcaacatcaacgcatctt-aaacagcttcacag 50  Q
    |||||||||||||||||||| |||||| ||||||||||||||    
T  54798721 acatcataatcaacatcaacacatcttaaaacagcttcacag 54798680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 133
Target Start/End: Complemental strand, 44928797 - 44928757
Alignment:
Q  93 gttcaactctcaacaactcgtgcaacaaaggtcgcaaaatc 133  Q
    |||||||||||||| |||||||| |||||| ||||||||||    
T  44928797 gttcaactctcaacgactcgtgcgacaaagatcgcaaaatc 44928757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 133
Target Start/End: Complemental strand, 52243079 - 52243027
Alignment:
Q  81 tactatcccaaagttcaactctcaacaactcgtgcaacaaaggtcgcaaaatc 133  Q
    ||||| ||||||||||||||||  || |||||||| |||||| ||||||||||    
T  52243079 tactaccccaaagttcaactctttacgactcgtgcgacaaagatcgcaaaatc 52243027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 115; Significance: 2e-58; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 20698402 - 20698136
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    ||||||||||||||||||||||| ||||| |||||| ||||||||||||| | |||| |||| |||||||||||||  ||| |||||| || ||||||||    
T  20698402 cattatatcacatcataatcaacttcaacacatcttgaacagcttcacagattataattaacatcatcattaagtcttaattctatccaaaggttcaact 20698303  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtcac---------------------tcgccgtgtcgagttcagg 179  Q
    ||| ||||||||||| |||||||||||||||||||||||| |||| ||||| ||||||||                     |||||||| ||||||||||    
T  20698302 ctcgacaactcgtgccacaaaggtcgcaaaatctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcagg 20698203  T
Q  180 tcagaatcccacaagtttcattccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||    
T  20698202 tcagaatcccacaagtttcattccaggttcaatctcatcctacattctttcctaatcattattagac 20698136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 26687042 - 26687205
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    |||||||||||| |||||||||||||||| |||||||||||||||||||| | |||| |||| || ||||||||||||||||||| ||||||||||||||    
T  26687042 cattatatcacaacataatcaacatcaacacatcttaaacagcttcacagattataattaacatcctcattaagtcccaatactaccccaaagttcaact 26687141  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtcactcgc 164  Q
    |||||| | ||||||||||||||||| |||| ||||||||||||| ||||| ||||||||||||    
T  26687142 ctcaacgattcgtgcaacaaaggtcgtaaaacctaacaagacactctgtttctgggtcactcgc 26687205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 40213687 - 40213523
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| |||| | |||| |||| ||||||||||||| |||||||| ||||| ||| ||||    
T  40213687 cattatatcacatcataatcaacatcaacacatcttaaacagctttacagattataattaacatcatcattaagtctcaatactaccccaaggttaaact 40213588  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaat-ctaacaagacactttgtttttgggtcactcgc 164  Q
    |||||||||||||||||||||||||||||||| |||||||| |||| ||||| ||||||||||||    
T  40213587 ctcaacaactcgtgcaacaaaggtcgcaaaatcctaacaaggcactctgtttctgggtcactcgc 40213523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 13442429 - 13442592
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| | |||| |||| |||||||||||||  |||   ||||||| ||||||||    
T  13442429 cattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaacatcatcattaagtcttaatgtcatcccaaggttcaact 13442528  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtcactcgc 164  Q
    ||| |||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||||||    
T  13442529 ctcgacaactcgtgcaacaaaggtcgcaaaatctaacaaggcactctgtttctgggtcactcgc 13442592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 43841087 - 43841250
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    |||||||||||| |||||||||||||||| |||||||||||||||||||| | |||| |||| || || |||||||||||||||| ||||||||  ||||    
T  43841087 cattatatcacaacataatcaacatcaacacatcttaaacagcttcacagattataattaacatcctcgttaagtcccaatactaccccaaagtcaaact 43841186  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtcactcgc 164  Q
    |||||||||||||| |||||||||||||||| ||||||||||||| ||||| ||||||||||||    
T  43841187 ctcaacaactcgtgtaacaaaggtcgcaaaacctaacaagacactctgtttctgggtcactcgc 43841250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 14576799 - 14576635
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||||| | |||| |||| |||||||||| ||  ||||||| ||||| ||||||||    
T  14576799 cattatatcacatcataatcaacatcaacacatcttaaacaacttcacagattataattaacatcatcattaaatcttaatactaccccaaggttcaact 14576700  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaat-ctaacaagacactttgtttttgggtcactcgc 164  Q
    |||||||||||||||||||||||||||||||| |||||||| |||||||||| | ||||||||||    
T  14576699 ctcaacaactcgtgcaacaaaggtcgcaaaatcctaacaaggcactttgtttctaggtcactcgc 14576635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 17488011 - 17488175
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||||| | |||| |||| |||||||||||||  ||| ||||||||| ||||||||    
T  17488011 cattatatcacatcataatcaacatcaacacatcttaaacagattcacagattataattaacatcatcattaagtcttaatgctatcccaaggttcaact 17488110  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttt-tgggtcactcgc 164  Q
    ||| |||||||||||||||||||||||||||||||||||| |||| |||||| | ||||||||||    
T  17488111 ctcgacaactcgtgcaacaaaggtcgcaaaatctaacaaggcactctgttttctaggtcactcgc 17488175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 18438689 - 18438853
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||||||| | |||  |||| ||||||||||||| |||||||| ||||| |||||||     
T  18438689 cattatatcacatcatattcaacatcaacacatcttaaacagcttcacagattatagttaacatcatcattaagtctcaatactaccccaaggttcaaca 18438788  T
Q  101 ctcaacaactcgtgcaacaaaggtcgc-aaaatctaacaagacactttgtttttgggtcactcgc 164  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||| ||||| ||||||||||||    
T  18438789 ctcaacaactcgtgcaacaaaggtcgcaaaaacctaacaagacactctgtttctgggtcactcgc 18438853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 11424729 - 11424565
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    |||||||||||||||||| |||| ||||| |||||||||||||||||||| | | || |||| ||| ||||||||| |||||||| ||||||||||||||    
T  11424729 cattatatcacatcataaacaacttcaacacatcttaaacagcttcacagattaaaattaacatcaacattaagtctcaatactaccccaaagttcaact 11424630  T
Q  101 ctcaacaactcgtgcaacaaaggtcgc-aaaatctaacaagacactttgtttttgggtcactcgc 164  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||| ||||| | |||| |||||    
T  11424629 ctcaacaactcgtgcaacaaaggtcgcaaaaacctaacaagacactctgtttctaggtcgctcgc 11424565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 25476351 - 25476187
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    |||||||||||||||| |||| ||||||| |||||||||||||||||||| |  ||| |||| || |||||||||| |||||||| | ||| ||||||||    
T  25476351 cattatatcacatcattatcatcatcaacacatcttaaacagcttcacagattgtaattaacatcctcattaagtctcaatactacctcaaggttcaact 25476252  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaat-ctaacaagacactttgtttttgggtcactcgc 164  Q
    |||||||||||||||||||||||||||||||| |||||||| |||| ||||| ||||||||||||    
T  25476251 ctcaacaactcgtgcaacaaaggtcgcaaaatcctaacaaggcactctgtttctgggtcactcgc 25476187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 17499493 - 17499644
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    ||||||||||||||| ||||||||||||| |||||||||||| ||||||  | |||| |||| |||||||||||||  ||| ||||||||| ||||||||    
T  17499493 cattatatcacatcaaaatcaacatcaacacatcttaaacagattcacaaattataattaacatcatcattaagtcttaatgctatcccaaggttcaact 17499592  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttt 152  Q
    ||| |||||||||||||||||||||||||||||||||||| |||| ||||||    
T  17499593 ctcgacaactcgtgcaacaaaggtcgcaaaatctaacaaggcactctgtttt 17499644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 23083327 - 23083164
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||| |  ||| |||| |||||| ||||||  ||||||| | ||| ||||||||    
T  23083327 cattatatcacatcataatcaatatcaacacatcttaaacagcttcacagattgtaattaacatcatcactaagtcttaatactacctcaaggttcaact 23083228  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtcactcgc 164  Q
    || |||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||| ||||    
T  23083227 ctgaacaactcgtgcaacaaaggtcgcaaaacctaacaagacactatgtttctgggtcattcgc 23083164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 14973009 - 14973170
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| || | |||| |||| ||||||||||||| |||||||| ||||| ||||||||    
T  14973009 cattatatcacatcataatcaacatcaacacatcttaaacagcttcatagattataattaacatcatcattaagtctcaatactaccccaaggttcaact 14973108  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaat-ctaacaagacactttgtttttgggtcact 161  Q
    || | ||||| |||| ||| |  ||||||||| |||||||| |||| ||||| |||||||||    
T  14973109 cttagcaacttgtgcgacacaaatcgcaaaatcctaacaaggcactctgtttctgggtcact 14973170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 14572743 - 14572907
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    |||||||||||||||||| |||||| |||  |||||||||| |||||||  | |||| |||| |||||||||||||  ||||||| ||||| ||||||||    
T  14572743 cattatatcacatcataaacaacataaacaaatcttaaacaacttcacaaattataattaacatcatcattaagtcttaatactaccccaaggttcaact 14572842  T
Q  101 ctcaacaactcgtgcaacaaaggtcgc-aaaatctaacaagacactttgtttttgggtcactcgc 164  Q
    ||||||||||||||||||||||||||| |||| ||||||||  ||| ||||| | ||||||||||    
T  14572843 ctcaacaactcgtgcaacaaaggtcgcaaaaacctaacaaggtactctgtttctaggtcactcgc 14572907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 42386565 - 42386698
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaa-cagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaac 99  Q
    ||||||||||||||||||||||||||||  ||||||||| ||||||||||| | || | |||| |||| |  |||||||||||||| ||||| |||||||    
T  42386565 cattatatcacatcataatcaacatcaaaacatcttaaaacagcttcacagattatcattaacatcataaacaagtcccaatactaccccaaggttcaac 42386664  T
Q  100 tctcaacaactcgtgcaacaaaggtcgcaaaatc 133  Q
    || ||||||||||||| |||||| ||||||||||    
T  42386665 tcacaacaactcgtgcgacaaagttcgcaaaatc 42386698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 16796702 - 16796865
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    |||||||||||||||||||||| | |||| ||||||||||| |||||||  | |||| || | || ||||||||||  ||| ||| || || ||||||||    
T  16796702 cattatatcacatcataatcaaaaacaacacatcttaaacaacttcacatattataattagcctcttcattaagtcttaatgctacccaaaggttcaact 16796801  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtcactcgc 164  Q
    || ||||| ||||||||||||||||||||| ||| ||||| |||| |||||  |||||||||||    
T  16796802 cttaacaattcgtgcaacaaaggtcgcaaagtctcacaaggcactctgtttccgggtcactcgc 16796865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 30029994 - 30030133
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    ||||||||||||||||||||||  ||||  |||||||||||||||||||  | |||   ||| |||||||||||||  ||  ||| || || ||||||||    
T  30029994 cattatatcacatcataatcaatgtcaaaacatcttaaacagcttcacatattatattaaacatcatcattaagtcttaaagctacccaaaggttcaact 30030093  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaatctaacaag 140  Q
    ||| ||||||||||||||||||||||||||||||||||||    
T  30030094 ctcgacaactcgtgcaacaaaggtcgcaaaatctaacaag 30030133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 160 - 243
Target Start/End: Original strand, 16809735 - 16809818
Alignment:
Q  160 ctcgccgtgtcgagttcaggtcagaatcccacaagtttcattccaggtttaatcacatcctagattctttcctaatcattatta 243  Q
    |||||| || ||||||||||||||||||||||||||||||||||||| | |||| ||||||| |||||||||||||||||||||    
T  16809735 ctcgccatggcgagttcaggtcagaatcccacaagtttcattccaggatcaatctcatcctacattctttcctaatcattatta 16809818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 159 - 246
Target Start/End: Original strand, 12399540 - 12399627
Alignment:
Q  159 actcgccgtgtcgagttcaggtcagaatcccacaagtttcattccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    |||||||||| |||||||||||||||| | |||||||||||||||||||| || | ||||||| ||| ||||||||||||||||||||    
T  12399540 actcgccgtggcgagttcaggtcagaacctcacaagtttcattccaggttcaaacccatcctatattttttcctaatcattattagac 12399627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 12399364 - 12399502
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    |||||||||||||||||||||||| |||| ||||||||| |||||||||| | |||  |||| || |||||| |||  ||| ||| || || | | ||      
T  12399364 cattatatcacatcataatcaacaacaacacatcttaaatagcttcacagattatagttaacctcttcattatgtcttaatgctacccaaaggcttaatc 12399463  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaatctaacaag 140  Q
    | |||||||||||||||||||||||| |||| ||||||||    
T  12399464 cccaacaactcgtgcaacaaaggtcggaaaa-ctaacaag 12399502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 160 - 246
Target Start/End: Original strand, 26687222 - 26687319
Alignment:
Q  160 ctcgccgtgtcgagttcaggtcagaatcccacaagtttcattc-----------caggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||||||| |||||||||||||||||||||||||||||||||           |||||| |||| ||||||| ||||||||||||||||||||||||    
T  26687222 ctcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatctttccaggttcaatctcatcctacattctttcctaatcattattagac 26687319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 14179587 - 14179636
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacag 50  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  14179587 cattatatcacatcataatcaacaacaacacatcttaaacagcttcacag 14179636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 24153171 - 24153126
Alignment:
Q  5 atatcacatcataatcaacatcaacgcatcttaaacagcttcacag 50  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  24153171 atatcacatcataatcaacatcaacacatcttaaacagcttcacag 24153126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 246
Target Start/End: Original strand, 17488192 - 17488289
Alignment:
Q  160 ctcgccgtgtcgagttcaggtcagaatcccacaagtttcattc-----------caggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||||||| ||| ||||||||||||||| |||||||||||||           |||||| |||| ||||||| ||||||||||||||||||||||||    
T  17488192 ctcgccgtggcgatttcaggtcagaatcctacaagtttcattctacaatctttccaggttcaatctcatcctacattctttcctaatcattattagac 17488289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 200 - 246
Target Start/End: Original strand, 17499725 - 17499771
Alignment:
Q  200 ttccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||||||| |||| ||||||| ||||||||||||||||||||||||    
T  17499725 ttccaggttcaatctcatcctacattctttcctaatcattattagac 17499771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 200 - 246
Target Start/End: Complemental strand, 40213456 - 40213410
Alignment:
Q  200 ttccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||||||| |||| ||||||| ||||||||||||||||||||||||    
T  40213456 ttccaggttcaatctcatcctacattctttcctaatcattattagac 40213410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 131
Target Start/End: Original strand, 23274924 - 23274973
Alignment:
Q  82 actatcccaaagttcaactctcaacaactcgtgcaacaaaggtcgcaaaa 131  Q
    |||||||||| | ||||||||||||||||||||| |||||| ||||||||    
T  23274924 actatcccaaggctcaactctcaacaactcgtgcgacaaagatcgcaaaa 23274973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 246
Target Start/End: Original strand, 30030208 - 30030260
Alignment:
Q  194 gtttcattccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||||||||||||| |||| ||||| | |||||||| |||||||||||||||    
T  30030208 gtttcattccaggttcaatctcatcccacattctttcgtaatcattattagac 30030260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 133
Target Start/End: Complemental strand, 52523613 - 52523561
Alignment:
Q  81 tactatcccaaagttcaactctcaacaactcgtgcaacaaaggtcgcaaaatc 133  Q
    ||||| |||||||||||||||||||  |||||||| |||||| ||||||||||    
T  52523613 tactaccccaaagttcaactctcaatgactcgtgcgacaaagatcgcaaaatc 52523561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 246
Target Start/End: Original strand, 13442621 - 13442706
Alignment:
Q  172 agttcaggtcagaatcccacaagtttcattc-----------caggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    |||||||||||||||||||||||||||||||           |||||| |||| ||||||| ||| ||||||||||||||||||||    
T  13442621 agttcaggtcagaatcccacaagtttcattctacaatctttccaggttcaatctcatcctacattttttcctaatcattattagac 13442706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 133
Target Start/End: Complemental strand, 53070583 - 53070532
Alignment:
Q  82 actatcccaaagttcaactctcaacaactcgtgcaacaaaggtcgcaaaatc 133  Q
    |||| ||||| |||||||||||||| |||||||| |||||| ||||||||||    
T  53070583 actaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatc 53070532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 246
Target Start/End: Original strand, 12340138 - 12340184
Alignment:
Q  200 ttccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||||||| |||| ||||||| ||||||||||||||| ||||||||    
T  12340138 ttccaggttcaatctcatcctacattctttcctaatcaatattagac 12340184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 246
Target Start/End: Original strand, 14572974 - 14573020
Alignment:
Q  200 ttccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||||||| |||| ||| ||| ||||||||||||||||||||||||    
T  14572974 ttccaggttcaatctcattctacattctttcctaatcattattagac 14573020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 246
Target Start/End: Complemental strand, 17248021 - 17247975
Alignment:
Q  200 ttccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||||||| |||| ||| ||| ||||||||||||||||||||||||    
T  17248021 ttccaggttcaatctcattctacattctttcctaatcattattagac 17247975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 205 - 246
Target Start/End: Original strand, 14973245 - 14973286
Alignment:
Q  205 ggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||||||| ||| ||| ||||||||||||||||||||||||    
T  14973245 ggtttaatctcattctacattctttcctaatcattattagac 14973286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 133
Target Start/End: Complemental strand, 2051073 - 2051033
Alignment:
Q  93 gttcaactctcaacaactcgtgcaacaaaggtcgcaaaatc 133  Q
    ||||||||||||||||||| ||| |||||| ||||||||||    
T  2051073 gttcaactctcaacaactcatgcgacaaagatcgcaaaatc 2051033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 244
Target Start/End: Original strand, 14665991 - 14666035
Alignment:
Q  200 ttccaggtttaatcacatcctagattctttcctaatcattattag 244  Q
    ||||||||| |||| ||||||| ||||||||||||||| ||||||    
T  14665991 ttccaggttcaatctcatcctacattctttcctaatcaatattag 14666035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 244
Target Start/End: Original strand, 14735504 - 14735548
Alignment:
Q  200 ttccaggtttaatcacatcctagattctttcctaatcattattag 244  Q
    ||||||||| |||| ||||||| ||||||||||||||| ||||||    
T  14735504 ttccaggttcaatctcatcctacattctttcctaatcaatattag 14735548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 202
Target Start/End: Original strand, 43841273 - 43841309
Alignment:
Q  166 gtgtcgagttcaggtcagaatcccacaagtttcattc 202  Q
    ||| ||||||||||||||||| |||||||||||||||    
T  43841273 gtggcgagttcaggtcagaattccacaagtttcattc 43841309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 246
Target Start/End: Original strand, 43842574 - 43842610
Alignment:
Q  210 aatcacatcctagattctttcctaatcattattagac 246  Q
    |||| ||||||| ||||||||||||||||||||||||    
T  43842574 aatctcatcctacattctttcctaatcattattagac 43842610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 112; Significance: 1e-56; HSPs: 2)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 13247 - 13410
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    |||||||||||| |||||||||||||||| |||||||||||| ||||||| | |||| |||| || ||||||||||||||||||| ||||||||||||||    
T  13247 cattatatcacaacataatcaacatcaacacatcttaaacagtttcacagattataattaacatcttcattaagtcccaatactaccccaaagttcaact 13346  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtcactcgc 164  Q
    ||||||||||||||||||||||||||||||| |||||||||||||  |||| ||||||||||||    
T  13347 ctcaacaactcgtgcaacaaaggtcgcaaaacctaacaagacactcagtttctgggtcactcgc 13410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 160 - 202
Target Start/End: Original strand, 13427 - 13469
Alignment:
Q  160 ctcgccgtgtcgagttcaggtcagaatcccacaagtttcattc 202  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  13427 ctcgccgtggcgagttcaggtcagaatcccacaagtttcattc 13469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 109; Significance: 6e-55; HSPs: 2)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 23037 - 23201
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    |||||||||||||| |||||||||||||| |||||||||||||||||||| | ||||||||| ||||||||||||| |||||||| ||||| ||||||||    
T  23037 cattatatcacatcgtaatcaacatcaacacatcttaaacagcttcacagattataaataacatcatcattaagtctcaatactaccccaaggttcaact 23136  T
Q  101 ctcaacaactcgtgcaacaaaggtcgc-aaaatctaacaagacactttgtttttgggtcactcgc 164  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||| ||||| | ||||||||||    
T  23137 ctcaacaactcgtgcaacaaaggtcgcaaaaacctaacaagacactctgtttctaggtcactcgc 23201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 246
Target Start/End: Original strand, 23278 - 23314
Alignment:
Q  210 aatcacatcctagattctttcctaatcattattagac 246  Q
    |||| ||||||| ||||||||||||||||||||||||    
T  23278 aatctcatcctacattctttcctaatcattattagac 23314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 108; Significance: 2e-54; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 124740 - 124903
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| | |||| |||| || ||||||||||  ||| ||||||||| ||||||||    
T  124740 cattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaacatcctcattaagtcttaatgctatcccaaggttcaact 124839  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtcactcgc 164  Q
    ||| ||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||    
T  124840 ctcgacaactcgtgcaacaaaggtcgcaaaatctaacaagacactctttttctgggtcactcgc 124903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 160 - 202
Target Start/End: Original strand, 124920 - 124962
Alignment:
Q  160 ctcgccgtgtcgagttcaggtcagaatcccacaagtttcattc 202  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  124920 ctcgccgtggcgagttcaggtcagaatcccacaagtttcattc 124962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 107; Significance: 9e-54; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 25 - 246
Target Start/End: Complemental strand, 17929 - 17697
Alignment:
Q  25 tcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaactctcaacaactcgtgcaacaaaggt 124  Q
    ||||| |||||||||||||||||||| | |||| |||| || ||||||||||  ||||||| || || |||||| |||||||||||||||||||||||||    
T  17929 tcaacacatcttaaacagcttcacagattataattaacatcctcattaagtcttaatactacccaaaggttcaattctcaacaactcgtgcaacaaaggt 17830  T
Q  125 cgcaaaatctaacaagacactttgtttttgggtcactcgccgtgtcgagttcaggtcagaatcccacaagtttcat-----------tccaggtttaatc 213  Q
    ||||||| |||||||| |||| | ||| ||||| |||||||||| |||||||||||||||||||||||||||||||           |||||||| ||||    
T  17829 cgcaaaacctaacaagtcactctatttctgggtgactcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatctatccaggttcaatc 17730  T
Q  214 acatcctagattctttcctaatcattattagac 246  Q
     ||||||| ||||||||||||||||||||||||    
T  17729 tcatcctacattctttcctaatcattattagac 17697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 107; Significance: 9e-54; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 13366 - 13632
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||  | |||| |||| |||||||||||||  ||| ||||||||| ||||||||    
T  13366 cattatatcacatcataatcaacatcaacacatcttaaacagcttcacaaattataattaacatcatcattaagtcttaatgctatcccaaggttcaact 13465  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtca---------------------ctcgccgtgtcgagttcagg 179  Q
     || |||||||||||||||||||||||||||||||||||| |||| || || | |||||                     ||||||||| ||||||||||    
T  13466 gtcgacaactcgtgcaacaaaggtcgcaaaatctaacaaggcactctgattctaggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcagg 13565  T
Q  180 tcagaatcccacaagtttcattccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||||| ||||||||||||||||||||| | || ||||||| ||||||||||||||||||||||||    
T  13566 tcagaatgccacaagtttcattccaggttcagtctcatcctacattctttcctaatcattattagac 13632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 105; Significance: 1e-52; HSPs: 3)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 38915 - 39079
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| | |||| |||| |||||||||||||  ||||||| ||||| ||||||||    
T  38915 cattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaacatcatcattaagtcttaatactaccccaaggttcaact 39014  T
Q  101 ctcaacaactcgtgcaacaaaggtcgc-aaaatctaacaagacactttgtttttgggtcactcgc 164  Q
    ||||||||||||||||||||||||||| |||| |||||||| |||| ||||| ||||||||||||    
T  39015 ctcaacaactcgtgcaacaaaggtcgcaaaaacctaacaagtcactatgtttctgggtcactcgc 39079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 33096 - 33145
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacag 50  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  33096 cattatatcacatcataatcaacatcaacacatcttaaacagcttcacag 33145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 246
Target Start/End: Original strand, 39096 - 39191
Alignment:
Q  160 ctcgccgtgtcgagttcaggtcagaatcccacaagtttcattc----------caggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||||||| ||||||||||||||||||| |||||||||||||          |||||| |||| ||| ||| ||||||||||||||||||||||||    
T  39096 ctcgccgtggcgagttcaggtcagaatcc-acaagtttcattcaaaatctttccaggttcaatctcattctacattctttcctaatcattattagac 39191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 105; Significance: 1e-52; HSPs: 2)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 8499 - 8335
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaa-gttcaac 99  Q
    |||||||||||| |||||||||||||||| |||||||||||||||||||| | |||| |||| || ||||||||||||||||||| ||| || |||||||    
T  8499 cattatatcacaacataatcaacatcaacacatcttaaacagcttcacagattataattaacatcctcattaagtcccaatactacccccaacgttcaac 8400  T
Q  100 tctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtcactcgc 164  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||| ||||| ||||||||||||    
T  8399 tctcaacaactcgtgcaacgaaggtcgcaaaacctaacaagacactctgtttctgggtcactcgc 8335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 200 - 246
Target Start/End: Complemental strand, 8267 - 8221
Alignment:
Q  200 ttccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||||||| |||| ||||||| ||||||||||||||||||||||||    
T  8267 ttccaggttcaatctcatcctacattctttcctaatcattattagac 8221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 105; Significance: 1e-52; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 24268 - 24104
Alignment:
Q  1 cattatatcacatcataat-caacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaac 99  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||| | |||| |||| || ||| ||||||  |||||||||||||||||||||    
T  24268 cattatatcacatcataattcaacatcaacacatcttaaacagcttcacagattataattaacatcctcaataagtcttaatactatcccaaagttcaac 24169  T
Q  100 tctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtcactcgc 164  Q
    |||| |||||||||||||||||||||||||||||||||||| |||||||||| | ||||||||||    
T  24168 tctcgacaactcgtgcaacaaaggtcgcaaaatctaacaaggcactttgtttctaggtcactcgc 24104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 246
Target Start/End: Complemental strand, 24077 - 23991
Alignment:
Q  170 cgagttcaggtcagaatcccacaagtttca----------ttccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||||||||||||||||||||||||||||          ||||||||| |||| ||||||| ||| ||||||||||||||||||||    
T  24077 cgagttcaggtcagaatcccacaagtttcattctacaattttccaggttcaatctcatcctacattttttcctaatcattattagac 23991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 105; Significance: 1e-52; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 25421687 - 25421851
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| | |||| |||| ||||||||||||| |||| ||| ||||| ||||||||    
T  25421687 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacagattataattaacatcatcattaagtctcaatgctaccccaaggttcaact 25421786  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaat-ctaacaagacactttgtttttgggtcactcgc 164  Q
    |||||||||||||||||||||||||||||||| |||||||| ||||  |||| | ||||||||||    
T  25421787 ctcaacaactcgtgcaacaaaggtcgcaaaatcctaacaaggcactcggtttctaggtcactcgc 25421851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 23390462 - 23390300
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||||||| | |||| |||| || ||||||||||  ||||||||||||| ||||||||    
T  23390462 cattatatcacatcataatcaacatcaacacatcttaaatagcttcacagattataattaacatcctcattaagtcttaatactatcccaaggttcaact 23390363  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtcactcg 163  Q
    ||| ||||||||||||||||||||| |||||||||||||| |||| |||||| ||||||||||    
T  23390362 ctcgacaactcgtgcaacaaaggtcacaaaatctaacaaggcactctgttttagggtcactcg 23390300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 25431549 - 25431713
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| | |||| |||| ||||||||||||| |||| ||| | ||| ||||||||    
T  25431549 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacagattataattaacatcatcattaagtctcaatgctacctcaaggttcaact 25431648  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaat-ctaacaagacactttgtttttgggtcactcgc 164  Q
    |||||||||||||| ||||||||||||||||| |||||||| ||||   ||| ||||||||||||    
T  25431649 ctcaacaactcgtgtaacaaaggtcgcaaaatcctaacaaggcactcgatttctgggtcactcgc 25431713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 8286808 - 8286542
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||    |||| |||| || ||||||||||  ||||||| || || ||||||||    
T  8286808 cattatatcacatcataatcaacatcaacacatcttaaacagcttcacataatataattaacatcttcattaagtcttaatactacccaaaggttcaact 8286709  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtcactc---------------------gccgtgtcgagttcagg 179  Q
    |||||||||||  ||||||||||||||||||||||||||| |||| ||||| ||||||||||                     ||| || | |||| |||    
T  8286708 ctcaacaactcaagcaacaaaggtcgcaaaatctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccatggctagtttagg 8286609  T
Q  180 tcagaatcccacaagtttcattccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||||||||||||||||||||||||||| |||| ||||||| |||||||| |||||||||||||||    
T  8286608 tcagaatcccacaagtttcattccaggttcaatctcatcctacattctttcttaatcattattagac 8286542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 24493723 - 24493885
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    |||||||||||||||||||||||||||||  |||||||| |||||||||| | |||| |||| |||| ||||||||  ||||||| ||||| ||||||||    
T  24493723 cattatatcacatcataatcaacatcaacatatcttaaatagcttcacagattataattaacatcattattaagtcttaatactaccccaaggttcaact 24493822  T
Q  101 ctcaacaactcgtgcaacaaaggtcgc-aaaatctaacaagacactttgtttttgggtcactc 162  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||| ||||| ||||| ||||    
T  24493823 ctcaacaactcgtgcaacaaaggtcgcaaaaacctaacaagacactctgtttatgggttactc 24493885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 9078107 - 9078271
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| | |||| |||| ||||||||||||| |||||||| ||||| |||||||     
T  9078107 cattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaacatcatcattaagtctcaatactaccccaaggttcaacc 9078206  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaat-ctaacaagacactttgtttttgggtcactcgc 164  Q
    || ||||||| |||| ||| || ||||||||| |||||||| |||| ||||| ||||||||||||    
T  9078207 cttaacaacttgtgcgacacagatcgcaaaatcctaacaaggcactctgtttctgggtcactcgc 9078271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 24529375 - 24529539
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||||||| | |||  |||| ||||||||||||  |||||||| ||||| ||||||||    
T  24529375 cattatatcacatcatattcaacatcaacacatcttaaacagcttcacagattatagttaacatcatcattaagtttcaatactaccccaaggttcaact 24529474  T
Q  101 ctcaacaactcgtgcaacaaaggtcgc-aaaatctaacaagacactttgtttttgggtcactcgc 164  Q
    |||||| ||| |||||||||||||||| |||| |||||||||| || ||||| ||||||||||||    
T  24529475 ctcaactactagtgcaacaaaggtcgcaaaaacctaacaagactctctgtttctgggtcactcgc 24529539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 13025465 - 13025629
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    |||||||||||||| ||||||||||||||  |||||||||| |||||||  | |||| |||| |||||||||||||  ||||||| ||||| ||||||||    
T  13025465 cattatatcacatcgtaatcaacatcaacatatcttaaacaacttcacatattataattaacatcatcattaagtcttaatactaccccaaggttcaact 13025564  T
Q  101 ctcaacaactcgtgcaacaaaggtcgc-aaaatctaacaagacactttgtttttgggtcactcgc 164  Q
    |||||||| |||||||||||||||||| |||| |||||||| |||| ||||| | ||||||||||    
T  13025565 ctcaacaaatcgtgcaacaaaggtcgcaaaaacctaacaagtcactctgtttctaggtcactcgc 13025629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 13095649 - 13095813
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    |||||||||||||| ||||||||||||||  |||||||||| |||||||  | |||| |||| |||||||||||||  ||||||| ||||| ||||||||    
T  13095649 cattatatcacatcgtaatcaacatcaacatatcttaaacaacttcacatattataattaacatcatcattaagtcttaatactaccccaaggttcaact 13095748  T
Q  101 ctcaacaactcgtgcaacaaaggtcgc-aaaatctaacaagacactttgtttttgggtcactcgc 164  Q
    |||||| |||||||||||||||||||| |||| |||||||| |||| ||||| | ||||||||||    
T  13095749 ctcaacgactcgtgcaacaaaggtcgcaaaaacctaacaagtcactctgtttctaggtcactcgc 13095813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 21986113 - 21985949
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    |||| |||||| ||||| ||||||||||| ||||||||||| |||||||  | |||  |||| ||||||| |||||  ||||||| ||||| ||||||||    
T  21986113 cattttatcacctcatattcaacatcaacacatcttaaacaacttcacaaattatagttaacatcatcatcaagtctgaatactaccccaaggttcaact 21986014  T
Q  101 ctcaacaactcgtgcaacaaaggtcgc-aaaatctaacaagacactttgtttttgggtcactcgc 164  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||| ||||| ||||||||||||    
T  21986013 ctcaacaactcgtgcaacaaaggtcgcaaaaacctaacaagacactctgtttctgggtcactcgc 21985949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 1096622 - 1096786
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||| || |||||||||| |||||||| ||||| || |||||    
T  1096622 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcataggttataattaacatcctcattaagtctcaatactaccccaaggtccaact 1096721  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaa-tctaacaagacactttgtttttgggtcactcgc 164  Q
     | ||||||| |||| ||| || |||||||| ||||| ||| || | ||||| ||||||||||||    
T  1096722 tttaacaacttgtgcgacagagatcgcaaaattctaaaaaggcattctgtttctgggtcactcgc 1096786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 22075174 - 22075337
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||  | |||| |||| || ||||||||||  ||| ||| || || ||| ||      
T  22075174 cattatatcacatcataatcaacaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtcttaatgctacccaaaggtttaatc 22075273  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttt-tgggtcactcgc 164  Q
    ||||||||||||||||||||||||||||||| |||||||| |||| |||||| ||||||||||||    
T  22075274 ctcaacaactcgtgcaacaaaggtcgcaaaa-ctaacaagtcactctgttttctgggtcactcgc 22075337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 164
Target Start/End: Complemental strand, 22107338 - 22107176
Alignment:
Q  2 attatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaactc 101  Q
    ||||||||||||||||||||||| |||| || ||||||||||||||||| | |||| |||| || ||||||||||  |||||||  | || ||||| |||    
T  22107338 attatatcacatcataatcaacaacaacacaccttaaacagcttcacagattataattaacctcttcattaagtcttaatactactcaaaggttcatctc 22107239  T
Q  102 tcaacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtcactcgc 164  Q
    ||||||||||||||||||||||||||||| | | ||||| |||| | |||  |||||||||||    
T  22107238 tcaacaactcgtgcaacaaaggtcgcaaagtatcacaaggcactctatttccgggtcactcgc 22107176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 21292936 - 21292670
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    ||||||||||||||||||||| || ||||  |||||| ||| |||||||| | |||| |||| |||| ||||||||  ||| ||| || |  || |||||    
T  21292936 cattatatcacatcataatcatcaacaacatatcttatacaacttcacagattataattaacctcattattaagtcttaatcctacccaagggtccaact 21292837  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtcac---------------------tcgccgtgtcgagttcagg 179  Q
    | | |||||||||||||||||||||||||||||||| ||| |||| | ||| ||||||||                     |||||||| ||||||||||    
T  21292836 cccgacaactcgtgcaacaaaggtcgcaaaatctaaaaagtcactctatttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcagg 21292737  T
Q  180 tcagaatcccacaagtttcattccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||||| |||||||||| |||||||||| |||| ||||||| ||||||||||||| ||||||||||    
T  21292736 tcagaattccacaagtttaattccaggttcaatctcatcctacattctttcctaattattattagac 21292670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 160 - 246
Target Start/End: Original strand, 22075354 - 22075440
Alignment:
Q  160 ctcgccgtgtcgagttcaggtcagaatcccacaagtttcattccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||||||| |||||||||||||||| | |||||||||||||||||||| | |  ||||||| |||||| |||||||||||||||||    
T  22075354 ctcgccgtggcgagttcaggtcagaacctcacaagtttcattccaggttcattttcatcctacattcttacctaatcattattagac 22075440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 171 - 246
Target Start/End: Complemental strand, 22107148 - 22107073
Alignment:
Q  171 gagttcaggtcagaatcccacaagtttcattccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||||||||||||||||||||||||| ||| |||||| |||| | ||||| ||||||||||||||| ||||||||    
T  22107148 gagttcaggtcagaatcccacaagtttaatttcaggttcaatctcgtcctacattctttcctaatcaatattagac 22107073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 246
Target Start/End: Complemental strand, 23390272 - 23390185
Alignment:
Q  170 cgagttcaggtcagaatcccacaagtttca-----------ttccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||||||||||||||||||||||||||||           ||||||||| |||| ||||||| ||||||||||||||||||||||||    
T  23390272 cgagttcaggtcagaatcccacaagtttcattctacaatctttccaggttcaatctcatcctacattctttcctaatcattattagac 23390185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 246
Target Start/End: Original strand, 24493904 - 24494000
Alignment:
Q  160 ctcgccgtgtcgagttcaggtcagaatcccacaagtttca----------ttccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||||||| ||||||||||||||||||| | ||||||||          ||||||||| |||| ||||||| ||||||||||||||||||||||||    
T  24493904 ctcgccgtggcgagttcaggtcagaatccaaaaagtttcattctaaatctttccaggttcaatctcatcctacattctttcctaatcattattagac 24494000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 50
Target Start/End: Original strand, 22412337 - 22412377
Alignment:
Q  10 acatcataatcaacatcaacgcatcttaaacagcttcacag 50  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  22412337 acatcataatcaacatcaacacatcttaaacagcttcacag 22412377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 246
Target Start/End: Original strand, 13025652 - 13025742
Alignment:
Q  166 gtgtcgagttcaggtcagaatcccacaagtttcattc----------caggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||| |||||||||||||||||||||||||||||||||          |||||  |||| ||||||| ||||||||||||||||||||||||    
T  13025652 gtggcgagttcaggtcagaatcccacaagtttcattctaaatctttccaggtccaatctcatcctacattctttcctaatcattattagac 13025742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 246
Target Start/End: Original strand, 13095836 - 13095926
Alignment:
Q  166 gtgtcgagttcaggtcagaatcccacaagtttcattc----------caggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||| |||||||||||||||||||||||||||||||||          |||||  |||| ||||||| ||||||||||||||||||||||||    
T  13095836 gtggcgagttcaggtcagaatcccacaagtttcattctaaatctttccaggtccaatctcatcctacattctttcctaatcattattagac 13095926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 200 - 246
Target Start/End: Original strand, 24529607 - 24529653
Alignment:
Q  200 ttccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||||||| |||| ||||||| ||||||||||||||||||||||||    
T  24529607 ttccaggttcaatctcatcctacattctttcctaatcattattagac 24529653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 88 - 133
Target Start/End: Original strand, 22144292 - 22144337
Alignment:
Q  88 ccaaagttcaactctcaacaactcgtgcaacaaaggtcgcaaaatc 133  Q
    |||| ||||||||||||||||||||||| |||||| ||||||||||    
T  22144292 ccaaggttcaactctcaacaactcgtgcgacaaagatcgcaaaatc 22144337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 133
Target Start/End: Complemental strand, 36154713 - 36154662
Alignment:
Q  82 actatcccaaagttcaactctcaacaactcgtgcaacaaaggtcgcaaaatc 133  Q
    |||| ||||| |||||||||||||| |||||||| |||||| ||||||||||    
T  36154713 actaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatc 36154662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 246
Target Start/End: Original strand, 1096853 - 1096899
Alignment:
Q  200 ttccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    |||||| || |||| ||||||| ||||||||||||||||||||||||    
T  1096853 ttccagattcaatctcatcctacattctttcctaatcattattagac 1096899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 246
Target Start/End: Complemental strand, 19660572 - 19660526
Alignment:
Q  200 ttccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    |||||||||||||| ||| | | ||||||||||||||||||||||||    
T  19660572 ttccaggtttaatctcattccacattctttcctaatcattattagac 19660526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 246
Target Start/End: Complemental strand, 21985929 - 21985836
Alignment:
Q  163 gccgtgtcgagttcaggtcagaatcccacaagtttcattc----------caggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    |||||| ||||||||||||||||| ||| |||||||||||          |||||| |||| ||| ||| ||||||||||||||||||||||||    
T  21985929 gccgtggcgagttcaggtcagaattccaaaagtttcattctaaatctttccaggttcaatctcattctacattctttcctaatcattattagac 21985836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 246
Target Start/End: Complemental strand, 22119928 - 22119882
Alignment:
Q  200 ttccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||||||| |||| ||||||| ||||||||||||||| ||||||||    
T  22119928 ttccaggttcaatctcatcctacattctttcctaatcaatattagac 22119882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 18418732 - 18418789
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatctt-aaacagcttcacaggtcataa 57  Q
    ||||||||||||||||||||||  ||||  |||||| |||||||||||||||| ||||    
T  18418732 cattatatcacatcataatcaatgtcaaaacatcttaaaacagcttcacaggttataa 18418789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 104; Significance: 6e-52; HSPs: 3)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 3625 - 3788
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| || | |||| |||| || ||||||||||  ||||||| |||||||||||| |    
T  3625 cattatatcacatcataatcaacatcaacacatcttaaacagcttcatagattataattaacatcctcattaagtcttaatactaccccaaagttcaatt 3724  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtcactcgc 164  Q
    ||||||||||||||||||||||||||||||| |||||||  |||| ||||||||||||||||||    
T  3725 ctcaacaactcgtgcaacaaaggtcgcaaaacctaacaactcactctgtttttgggtcactcgc 3788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 497 - 661
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| |  | |||| |||| || |||||||||| |||||||| ||||| ||||||||    
T  497 cattatatcacatcataatcaacatcaacacatcttaaacagcttcatatattataattaacatcctcattaagtctcaatactaccccaaggttcaact 596  T
Q  101 ctcaacaactcgtgcaacaaaggtcgc-aaaatctaacaagacactttgtttttgggtcactcgc 164  Q
    ||||||||||| |||||||||||| || |||| ||||||||||||| ||||| ||||||||||||    
T  597 ctcaacaactcatgcaacaaaggttgcaaaaacctaacaagacactctgtttctgggtcactcgc 661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 160 - 246
Target Start/End: Original strand, 3805 - 3902
Alignment:
Q  160 ctcgccgtgtcgagttcaggtcagaatcccacaagtt-----------tcattccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||||||| |||||||||||||||||||||||||||           |||||||||||| |||| ||||||| ||||||||||||||||||||||||    
T  3805 ctcgccgtggcgagttcaggtcagaatcccacaagtttgattctacaatcattccaggttcaatctcatcctacattctttcctaatcattattagac 3902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 104; Significance: 6e-52; HSPs: 4)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 26050 - 26213
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| | |||| |||| || |||||||||| |||| ||| ||||| ||||||||    
T  26050 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacagattataattaacatcctcattaagtctcaatgctaccccaaggttcaact 26149  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaat-ctaacaagacactttgtttttgggtcactcg 163  Q
    |||||||| ||||||||||||||||||||||| |||||||| ||||| |||| |||||||||||    
T  26150 ctcaacaaatcgtgcaacaaaggtcgcaaaatcctaacaaggcacttggtttctgggtcactcg 26213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 40012 - 40156
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  | |||| |||| || |||||||||| |||| ||| ||||| ||||||||    
T  40012 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaaattataattaacatcctcattaagtctcaatgcta-cccaaggttcaact 40110  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaatc-taacaagacact 145  Q
    |||||||| | |||||||||||||||||||||| ||||||| ||||    
T  40111 ctcaacaaattgtgcaacaaaggtcgcaaaatcataacaaggcact 40156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 200 - 246
Target Start/End: Original strand, 26611 - 26657
Alignment:
Q  200 ttccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||||    
T  26611 ttccaggtttaatctcatcctacattctttcctaatcattattagac 26657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 246
Target Start/End: Original strand, 40242 - 40288
Alignment:
Q  200 ttccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||||||| |||| ||||||  ||||||||||||||||||||||||    
T  40242 ttccaggttcaatctcatcctccattctttcctaatcattattagac 40288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 104; Significance: 6e-52; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 339916 - 339753
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| | |||| |||||||||||||||||| |||||||| ||||| |||||||     
T  339916 cattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaacgtcatcattaagtctcaatactaccccaaggttcaacc 339817  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtcactcgc 164  Q
    || ||| |||||||||||||||||||||||| |||||||| |||| | ||| ||||||||||||    
T  339816 cttaacgactcgtgcaacaaaggtcgcaaaacctaacaaggcactctatttctgggtcactcgc 339753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 246
Target Start/End: Complemental strand, 339686 - 339640
Alignment:
Q  200 ttccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||||||| |||| ||||||| |||| |||||||||||||||||||    
T  339686 ttccaggttcaatctcatcctacattcattcctaatcattattagac 339640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540 (Bit Score: 103; Significance: 2e-51; HSPs: 1)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 3117 - 2987
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||||||||||||| |||||||| ||||| ||||||||    
T  3117 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggttataattaacatcatcattaagtctcaatactaccccaaggttcaact 3018  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaa 131  Q
    ||||||||||||||||||| |||||||||||    
T  3017 ctcaacaactcgtgcaacacaggtcgcaaaa 2987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 103; Significance: 2e-51; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 2006 - 2168
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||||||| | |||| |||| || ||||||||||  ||||||||||||| ||||||||    
T  2006 cattatatcacatcataatcaacatcaacacatcttaaatagcttcacagattataattaacatcctcattaagtcttaatactatcccaaggttcaact 2105  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtcactcg 163  Q
    ||| ||||||||||||||||||||| |||||||||||||| |||| |||||| ||||||||||    
T  2106 ctcgacaactcgtgcaacaaaggtcacaaaatctaacaaggcactctgttttagggtcactcg 2168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 246
Target Start/End: Original strand, 2196 - 2283
Alignment:
Q  170 cgagttcaggtcagaatcccacaagtttcattc-----------caggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    |||||||||||||||||||||||||||||||||           |||||| |||| ||||||| ||||||||||||||||||||||||    
T  2196 cgagttcaggtcagaatcccacaagtttcattctacaatctttccaggttcaatctcatcctacattctttcctaatcattattagac 2283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484 (Bit Score: 101; Significance: 4e-50; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 1069 - 1333
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    |||||||||||||||||||||||| |||| ||||||||||| |||||||| | |||| || | || ||||||||||  ||||||| || |||||||||||    
T  1069 cattatatcacatcataatcaacaacaacacatcttaaacatcttcacagattataattagcctcttcattaagtcttaatactacccaaaagttcaact 1168  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtca---------------------ctcgccgtgtcgagttcagg 179  Q
    |||||||||||||||||||||||||||||| ||| ||||| ||||||||||  ||||||                     |||||| || ||||||| ||    
T  1169 ctcaacaactcgtgcaacaaaggtcgcaaagtctcacaaggcactttgtttccgggtcactcgtgaggcgagagcctctgctcgccatggcgagttctgg 1268  T
Q  180 tcagaatcccacaagtttcattccaggtttaatcacatcctagattctttcctaatcattattag 244  Q
    ||||||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||    
T  1269 tcagaatcccacaagtttcattccaggttcaatctcatcctacattctttcctaatcattattag 1333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 101; Significance: 4e-50; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 4 - 164
Target Start/End: Original strand, 9509347 - 9509507
Alignment:
Q  4 tatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaactctc 103  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| | |||| |||| || ||||||||||  ||| ||||||||| |||||||||||    
T  9509347 tatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaacatcctcattaagtcttaatgctatcccaaggttcaactctc 9509446  T
Q  104 aacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtcactcgc 164  Q
     ||||||| |||||||||||||||||||||||||||| |||| ||||| ||||||||||||    
T  9509447 gacaactcttgcaacaaaggtcgcaaaatctaacaaggcactctgtttctgggtcactcgc 9509507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 12698987 - 12699148
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| | |||| |||| || ||||||| ||  ||||||| ||||| ||||||||    
T  12698987 cattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaacatcctcattaactcttaatactaccccaaggttcaact 12699086  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtcactc 162  Q
     || ||||||||||||||||||||||||||| |||||||| |||||||||| ||||||||||    
T  12699087 atcgacaactcgtgcaacaaaggtcgcaaaacctaacaagtcactttgtttctgggtcactc 12699148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 3564330 - 3564166
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    ||||| ||||||||||||||||||||||| ||||||||||| ||||| |||| |||| |||| ||||||||||||| |||||||| ||||| ||| ||||    
T  3564330 cattagatcacatcataatcaacatcaacacatcttaaacaacttcataggttataattaacatcatcattaagtctcaatactaccccaaggttaaact 3564231  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaat-ctaacaagacactttgtttttgggtcactcgc 164  Q
    || ||||||||||||||||||||||||||||| |||||||| |||| ||||| ||||||||||||    
T  3564230 cttaacaactcgtgcaacaaaggtcgcaaaatcctaacaaggcactctgtttctgggtcactcgc 3564166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 16386213 - 16385947
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    |||||||| ||||||||||||||| |||| |||||||||||||||||||| | |||  |||| || ||||||||||  |||  || || || ||||||||    
T  16386213 cattatattacatcataatcaacaacaacacatcttaaacagcttcacagattatagttaacctcttcattaagtcttaatgttacccaaaggttcaact 16386114  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtcac---------------------tcgccgtgtcgagttcagg 179  Q
    ||  ||||||| |||||||||||||||||||||||||||| |||| ||||| ||||||||                     |||||||| ||||||||||    
T  16386113 ctggacaactcatgcaacaaaggtcgcaaaatctaacaagtcactctgtttctgggtcactcgcgaggcgagagccactgctcgccgtggcgagttcagg 16386014  T
Q  180 tcagaatcccacaagtttcattccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    | |||||||||||||||| |||||||||| |||| ||||||| ||||||||||||||||||||||||    
T  16386013 ttagaatcccacaagtttaattccaggttcaatctcatcctacattctttcctaatcattattagac 16385947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 38227635 - 38227799
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    |||||||||||||| ||||||||||||||  |||||||| | |||||||  | |||| |||| |||||||||||||  ||||||| ||||| ||||||||    
T  38227635 cattatatcacatcttaatcaacatcaacatatcttaaatatcttcacatattataattaacatcatcattaagtcttaatactaccccaaggttcaact 38227734  T
Q  101 ctcaacaactcgtgcaacaaaggtcgc-aaaatctaacaagacactttgtttttgggtcactcgc 164  Q
    || |||||||||||||||||||||||| |||| |||||||| |||| ||||| ||||||||||||    
T  38227735 cttaacaactcgtgcaacaaaggtcgcaaaaacctaacaaggcactctgtttatgggtcactcgc 38227799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 10589193 - 10589356
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    ||||||||||||||||||||| || |||| ||||||||| |||||||||| | |||| |||| |||||||||||||  ||| ||| || || || |||||    
T  10589193 cattatatcacatcataatcagcaacaacacatcttaaatagcttcacagattataattaacctcatcattaagtcttaatcctacccaaaggtccaact 10589292  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtcactcgc 164  Q
    ||  ||||||||||||| |||||||||||||||||||||| |||| ||||| ||||||||||||    
T  10589293 ctagacaactcgtgcaaaaaaggtcgcaaaatctaacaagtcactctgtttctgggtcactcgc 10589356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 9 - 246
Target Start/End: Complemental strand, 27847791 - 27847533
Alignment:
Q  9 cacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaactctcaacaa 108  Q
    |||||||||||||||| ||||  ||||||  ||||||||||| | |||  |||  |||| ||||||||  ||| ||| || |  ||||||||||| ||||    
T  27847791 cacatcataatcaacaacaacatatcttattcagcttcacagattatagttaatctcattattaagtcttaatcctacccaagggttcaactctcgacaa 27847692  T
Q  109 ctcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtcactc---------------------gccgtgtcgagttcaggtcagaatc 187  Q
    |||||||||||||||||||||||||||||||| |||| ||||||||||||||||                     |||||| ||||||||||||| ||||    
T  27847691 ctcgtgcaacaaaggtcgcaaaatctaacaagtcactctgtttttgggtcactcgcgaggcgagagcctctgcttgccgtggcgagttcaggtcaaaatc 27847592  T
Q  188 ccacaagtttcattccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||| |||||| |||||||||| |||| ||||||| |||||||||||||||| |||||||    
T  27847591 ccataagtttaattccaggttcaatctcatcctaaattctttcctaatcataattagac 27847533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 40443544 - 40443809
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    |||||||||||||||||||||||| | ||  |||||| |||||||||||| | |||| |||| ||||  |||||||  ||| ||| || |  ||||| ||    
T  40443544 cattatatcacatcataatcaacaacgacatatcttatacagcttcacagattataattaacctcattgttaagtcttaatcctacccaagggttcatct 40443643  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtca---------------------ctcgccgtgtcgagttcagg 179  Q
    ||| ||||||||||||||||||||||||||||| || ||| |||| ||||| |||||||                     ||||||||| ||||||||||    
T  40443644 ctcgacaactcgtgcaacaaaggtcgcaaaatccaataagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcagg 40443743  T
Q  180 tcagaatcccacaagtttcattccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||||||||||||| || |||||||||| |||| ||||||| ||||||||||||||||||||||||    
T  40443744 tcagaatcccacaag-ttaattccaggttcaatctcatcctaaattctttcctaatcattattagac 40443809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 26212151 - 26212314
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    ||||||||||||| |||||||||| |||| |||||||||||||||||||| | |||| |||| || ||||||||||  ||| ||| || || ||| ||      
T  26212151 cattatatcacattataatcaacaacaacacatcttaaacagcttcacagattataattaacctcttcattaagtcttaatgctacccaaaggtttaatc 26212250  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttt-tgggtcactcgc 164  Q
    ||||||||||||||||||||||||||||||| |||||||  |||| |||||| ||||||||||||    
T  26212251 ctcaacaactcgtgcaacaaaggtcgcaaaa-ctaacaaatcactctgttttctgggtcactcgc 26212314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 164
Target Start/End: Complemental strand, 15144000 - 15143839
Alignment:
Q  5 atatcacatcataatcaacatcaacgcatcttaaa-cagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaactctc 103  Q
    ||||||||||||||||||  ||||  ||||||||| |||||| |||| | |||   ||| |||||||||||||  | ||||| ||| | ||||||||||     
T  15144000 atatcacatcataatcaatgtcaaaacatcttaaaacagcttgacagattatattaaacatcatcattaagtcttagtactaccccgaggttcaactctt 15143901  T
Q  104 aacaactcgtgcaacaaaggtcgcaaaat-ctaacaagacactttgtttttgggtcactcgc 164  Q
    | ||||||||||||||||||||||||||| |||||||| |||| ||||| | ||||||||||    
T  15143900 agcaactcgtgcaacaaaggtcgcaaaatcctaacaaggcactctgtttctaggtcactcgc 15143839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 159 - 246
Target Start/End: Original strand, 26212330 - 26212417
Alignment:
Q  159 actcgccgtgtcgagttcaggtcagaatcccacaagtttcattccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    |||||||||| |||||||||||||||| | |||||||||||||||||||| |||| ||||||| |||||| |||||| | ||||||||    
T  26212330 actcgccgtggcgagttcaggtcagaacctcacaagtttcattccaggttcaatctcatcctacattcttacctaataaatattagac 26212417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 18456379 - 18456330
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacag 50  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  18456379 cattatatcacatcataatcaacatcaacacatcttaaacagcttcacag 18456330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 160 - 246
Target Start/End: Original strand, 9509524 - 9509621
Alignment:
Q  160 ctcgccgtgtcgagttcaggtcagaatcccacaagtttcattc-----------caggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||||||| |||||||||||||||||||||||||||||||||           |||||| |||| ||||||| ||||||||||||||||||||||||    
T  9509524 ctcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatctttccaggttcaatctcatcctacattctttcctaatcattattagac 9509621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 246
Target Start/End: Original strand, 12699167 - 12699264
Alignment:
Q  160 ctcgccgtgtcgagttcaggtcagaatcccacaagtttcattc-----------caggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||||||| |||||||||||||||||||||| ||||||||||           |||||| |||  ||||||| ||||||||||||||||||||||||    
T  12699167 ctcgccgtggcgagttcaggtcagaatcccacgagtttcattcaacaatctttccaggttcaatttcatcctacattctttcctaatcattattagac 12699264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 200 - 246
Target Start/End: Complemental strand, 3564099 - 3564053
Alignment:
Q  200 ttccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||||||| |||| ||||||| ||||||||||||||||||||||||    
T  3564099 ttccaggttcaatctcatcctacattctttcctaatcattattagac 3564053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 246
Target Start/End: Original strand, 38227816 - 38227912
Alignment:
Q  160 ctcgccgtgtcgagttcaggtcagaatcccacaagtttcattc----------caggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||||||| ||||||||||||||||||| | |||||||||||          |||||| |||| ||| ||| ||||||||||||||||||||||||    
T  38227816 ctcgccgtggcgagttcaggtcagaatccaaaaagtttcattctaaatctttccaggttcaatctcattctacattctttcctaatcattattagac 38227912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 133
Target Start/End: Complemental strand, 2280084 - 2279952
Alignment:
Q  2 attatatcacatcataatcaacatcaacgcatctta-aacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    |||||||||||| |||| |||||||||  ||||||| ||||||||||||| |||| | | |  |||| | |||    || ||| | ||||| ||||||||    
T  2280084 attatatcacattataaacaacatcaaatcatcttataacagcttcacagatcatcattgatatcataaataatcttcattacgaccccaaggttcaact 2279985  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaatc 133  Q
    ||||||||||||||  |||||| ||||||||||    
T  2279984 ctcaacaactcgtgtgacaaagatcgcaaaatc 2279952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 133
Target Start/End: Complemental strand, 12255677 - 12255625
Alignment:
Q  81 tactatcccaaagttcaactctcaacaactcgtgcaacaaaggtcgcaaaatc 133  Q
    ||||| |||||| |||||||||||||||||||||  |||||| ||||||||||    
T  12255677 tactaccccaaaattcaactctcaacaactcgtgtgacaaagatcgcaaaatc 12255625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 133
Target Start/End: Complemental strand, 12756601 - 12756550
Alignment:
Q  82 actatcccaaagttcaactctcaacaactcgtgcaacaaaggtcgcaaaatc 133  Q
    |||| ||||| |||||||||||||| |||||||| |||||| ||||||||||    
T  12756601 actaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatc 12756550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 246
Target Start/End: Complemental strand, 39267381 - 39267335
Alignment:
Q  200 ttccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||||||| |||| ||||||| ||||||||||||||| ||||||||    
T  39267381 ttccaggttcaatctcatcctacattctttcctaatcaatattagac 39267335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 50
Target Start/End: Original strand, 48273542 - 48273583
Alignment:
Q  10 acatcataatcaacatcaacgcatctt-aaacagcttcacag 50  Q
    |||||||||||||||||||| |||||| ||||||||||||||    
T  48273542 acatcataatcaacatcaacacatcttaaaacagcttcacag 48273583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 133
Target Start/End: Complemental strand, 17061834 - 17061794
Alignment:
Q  93 gttcaactctcaacaactcgtgcaacaaaggtcgcaaaatc 133  Q
    |||||||||||||| |||||||| |||||| ||||||||||    
T  17061834 gttcaactctcaacgactcgtgcgacaaagatcgcaaaatc 17061794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0647 (Bit Score: 97; Significance: 9e-48; HSPs: 1)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 6087 - 5927
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||  | |||| |||| |||||||||||||  ||| ||||||||| |||| |||    
T  6087 cattatatcacatcataatcaacatcaacacatcttaaacagcttcacattttataattaacatcatcattaagtcttaatgctatcccaaggttccact 5988  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtcact 161  Q
    ||| | |||||||||||||||||||||||||||||||||| |||| ||||| |||||||||    
T  5987 ctcgataactcgtgcaacaaaggtcgcaaaatctaacaaggcactctgtttctgggtcact 5927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 97; Significance: 9e-48; HSPs: 4)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 26031 - 25867
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| || | |||| |||| ||||||||||||| |||||||| ||||| ||||| ||    
T  26031 cattatatcacatcataatcaacatcaacacatcttaaacagcttcatagattataattaacatcatcattaagtctcaatactaccccaaggttcagct 25932  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaat-ctaacaagacactttgtttttgggtcactcgc 164  Q
    || | ||||||||||||||||||||||||||| |||||||| |||| ||||| ||||||||||||    
T  25931 cttagcaactcgtgcaacaaaggtcgcaaaatcctaacaaggcactctgtttctgggtcactcgc 25867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 33461 - 33301
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||| ||||||||||||| |||||||| ||||| ||||||||    
T  33461 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcataggttataattaacatcatcattaagtctcaatactaccccaaggttcaact 33362  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaat-ctaacaagacactttgtttttgggtcac 160  Q
    || ||||||| ||   ||| || ||||||||| || ||||| |||| ||||| ||||||||    
T  33361 cttaacaacttgtatgacacagatcgcaaaatcctgacaaggcactctgtttctgggtcac 33301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 200 - 246
Target Start/End: Complemental strand, 33229 - 33183
Alignment:
Q  200 ttccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||||||| |||| ||||||| ||||||||||||||||||||||||    
T  33229 ttccaggttcaatctcatcctacattctttcctaatcattattagac 33183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 203 - 246
Target Start/End: Complemental strand, 25797 - 25754
Alignment:
Q  203 caggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    |||||| |||| ||||||| ||||||||||||||||||||||||    
T  25797 caggttcaatctcatcctacattctttcctaatcattattagac 25754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 97; Significance: 9e-48; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 40067 - 40231
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    ||||||||||||||||||||||||||||| |||| |||| |||||||||| | |||| |||| ||||||||||||| |||||||| ||||| ||||||||    
T  40067 cattatatcacatcataatcaacatcaacacatcataaagagcttcacagattataattaacatcatcattaagtctcaatactaccccaaggttcaact 40166  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaa-atctaacaagacactttgtttttgggtcactcgc 164  Q
    |||||||||||||||||||||||||||||| | ||||||||  ||| ||||| ||||||||||||    
T  40167 ctcaacaactcgtgcaacaaaggtcgcaaacacctaacaaggtactctgtttctgggtcactcgc 40231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 96; Significance: 3e-47; HSPs: 3)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 52068 - 52230
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    |||||||||||| ||||||| |||||||| |||||||||||||||||||| | |||| |||| |||||||||||||  ||||||| ||||| ||||||||    
T  52068 cattatatcacaacataatctacatcaacacatcttaaacagcttcacagattataattaacatcatcattaagtcttaatactaccccaaggttcaact 52167  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtcactcgc 164  Q
    |||||||||||||||||| |||||||||||| |||||||||||||  |||| ||||||||||||    
T  52168 ctcaacaactcgtgcaac-aaggtcgcaaaacctaacaagacactcagtttctgggtcactcgc 52230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 167945 - 167679
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    |||||||||||||||||||||||   ||| ||||||||||||||||| || | |||| |||| || ||||||||||  ||| ||| || || ||||||||    
T  167945 cattatatcacatcataatcaaccaaaacacatcttaaacagcttcaaagattataattaacctcttcattaagtcttaatgctacccaaaggttcaact 167846  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtcac---------------------tcgccgtgtcgagttcagg 179  Q
    ||| |||| ||||||||||||||||||||||||||||||| |||| ||||| ||||||||                     |||||||| ||||||||||    
T  167845 ctcgacaattcgtgcaacaaaggtcgcaaaatctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcagg 167746  T
Q  180 tcagaatcccacaagtttcattccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    |||||||||||||||||||| || ||||| |||| ||||||| ||||||||||||||||||||||||    
T  167745 tcagaatcccacaagtttcaatctaggttcaatctcatcctaaattctttcctaatcattattagac 167679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 160 - 246
Target Start/End: Original strand, 52247 - 52344
Alignment:
Q  160 ctcgccgtgtcgagttcaggtcagaatcccacaagtttcattc-----------caggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||||||| |||||||||||||||||||||||||||||||||           |||||| |||| ||||||| ||||||||||||||||||||||||    
T  52247 ctcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatctttccaggttcaatctcatcctacattctttcctaatcattattagac 52344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1842 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold1842
Description:

Target: scaffold1842; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 1015 - 749
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    |||||||||||||||||||||||   ||| ||||||||||||||||| || | |||| |||| || ||||||||||  ||| ||| || || ||||||||    
T  1015 cattatatcacatcataatcaaccaaaacacatcttaaacagcttcaaagattataattaacctcttcattaagtcttaatgctacccaaaggttcaact 916  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtcac---------------------tcgccgtgtcgagttcagg 179  Q
    ||| |||| ||||||||||||||||||||||||||||||| |||| ||||| ||||||||                     |||||||| ||||||||||    
T  915 ctcgacaattcgtgcaacaaaggtcgcaaaatctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcagg 816  T
Q  180 tcagaatcccacaagtttcattccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    |||||||||||||||||||| || ||||| |||| ||||||| ||||||||||||||||||||||||    
T  815 tcagaatcccacaagtttcaatctaggttcaatctcatcctaaattctttcctaatcattattagac 749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0639 (Bit Score: 91; Significance: 3e-44; HSPs: 2)
Name: scaffold0639
Description:

Target: scaffold0639; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 10 - 164
Target Start/End: Original strand, 8639 - 8793
Alignment:
Q  10 acatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaactctcaacaac 109  Q
    |||||||||||||||||||| |||| ||||||||||||||| |  ||| |||| |||||||||||||  |||||||  |||| |||||||||||||||||    
T  8639 acatcataatcaacatcaacacatcctaaacagcttcacagattgtaattaacatcatcattaagtcttaatactactccaaggttcaactctcaacaac 8738  T
Q  110 tcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtcactcgc 164  Q
    |||||||||||||||||||||| ||||||||||||| ||||| ||||||| ||||    
T  8739 tcgtgcaacaaaggtcgcaaaacctaacaagacactctgtttctgggtcattcgc 8793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0639; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 201
Target Start/End: Original strand, 8813 - 8851
Alignment:
Q  163 gccgtgtcgagttcaggtcagaatcccacaagtttcatt 201  Q
    |||||| ||||||||||||||||||||||||||| ||||    
T  8813 gccgtggcgagttcaggtcagaatcccacaagttccatt 8851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 90; Significance: 1e-43; HSPs: 2)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 21066 - 21227
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    ||||||||||||||||||||| ||||||| |||||||||||||||||||||| |||| |||| || ||||||||||  ||||||| || || ||||||||    
T  21066 cattatatcacatcataatcagcatcaacacatcttaaacagcttcacaggttataattaacatcttcattaagtcttaatactacccaaaggttcaact 21165  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtcactc 162  Q
    || | ||||||||||||||||||||||||||   |||||| |||| ||||||||||||||||    
T  21166 ctgatcaactcgtgcaacaaaggtcgcaaaactcaacaagtcactctgtttttgggtcactc 21227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 190 - 246
Target Start/End: Original strand, 21266 - 21322
Alignment:
Q  190 acaagtttcattccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||||||||||||||||  |||| ||||||| |||||||| |||||||||||||||    
T  21266 acaagtttcattccaggtacaatctcatcctacattctttcataatcattattagac 21322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 89; Significance: 5e-43; HSPs: 2)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 5 - 240
Target Start/End: Original strand, 3640 - 3896
Alignment:
Q  5 atatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaactctca 104  Q
    |||||||||||||||||||| |||| |||||||||||||||||||| | |||| || | || ||||||||||  ||||||| || || ||||||||||||    
T  3640 atatcacatcataatcaacaacaacacatcttaaacagcttcacagattataattagcctcttcattaagtcttaatactacccaaaggttcaactctca 3739  T
Q  105 acaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtca---------------------ctcgccgtgtcgagttcaggtcag 183  Q
    ||||||||||||||||||||| |||| ||| ||||| |||| |||||  ||||||                     |||||| || ||||||||||||||    
T  3740 acaactcgtgcaacaaaggtcacaaagtctcacaaggcactctgtttccgggtcactcgcgagacgagagcctctgctcgccatggcgagttcaggtcag 3839  T
Q  184 aatcccacaagtttcattccaggtttaatcacatcctagattctttcctaatcatta 240  Q
    ||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||    
T  3840 aatcccacaagtttcattccaggttcaatctcatcctacattctttcctaatcatta 3896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 5 - 240
Target Start/End: Original strand, 7704 - 7960
Alignment:
Q  5 atatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaactctca 104  Q
    |||||||||||||||||||| |||| |||||||||||||||||||| | |||| || | || ||||||||||  ||||||| || || ||||||||||||    
T  7704 atatcacatcataatcaacaacaacacatcttaaacagcttcacagattataattagcctcttcattaagtcttaatactacccaaaggttcaactctca 7803  T
Q  105 acaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtca---------------------ctcgccgtgtcgagttcaggtcag 183  Q
    ||||||||||||||||||||| |||| ||| ||||| |||| |||||  ||||||                     |||||| || ||||||||||||||    
T  7804 acaactcgtgcaacaaaggtcacaaagtctcacaaggcactctgtttccgggtcactcgcgagacgagagcctctgctcgccatggcgagttcaggtcag 7903  T
Q  184 aatcccacaagtttcattccaggtttaatcacatcctagattctttcctaatcatta 240  Q
    ||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||    
T  7904 aatcccacaagtttcattccaggttcaatctcatcctacattctttcctaatcatta 7960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 89; Significance: 5e-43; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 17181 - 17017
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    ||||||||||||||||||||||||||||| | ||||||||||||| |||| | |||| |||| |||| |||||||| |||||||| ||||| ||| ||||    
T  17181 cattatatcacatcataatcaacatcaacacgtcttaaacagctttacagattataattaacatcatgattaagtctcaatactaccccaaggtttaact 17082  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaat-ctaacaagacactttgtttttgggtcactcgc 164  Q
    |||||||||||||||||||||||||||||||| |||| |||  ||| ||||| ||||||||||||    
T  17081 ctcaacaactcgtgcaacaaaggtcgcaaaatcctaataaggtactctgtttctgggtcactcgc 17017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 246
Target Start/End: Complemental strand, 16996 - 16904
Alignment:
Q  164 ccgtgtcgagttcaggtcagaatcccacaagtttcattc----------caggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||| ||||||||||||||||| ||| |||||||||||          |||||| |||| ||| ||| ||||||||||||||||||||||||    
T  16996 ccgtggcgagttcaggtcagaattccaaaagtttcattctaaatctttccaggttcaatctcattctacattctttcctaatcattattagac 16904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 10392 - 10126
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    ||||||||||||||||||||| || | ||  |||||| |||||||||||| | |||| |||| | || ||||||||  ||| ||| || |  ||||||||    
T  10392 cattatatcacatcataatcatcaacgacatatcttatacagcttcacagattataattaaccttattattaagtcttaattctacccaagggttcaact 10293  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtcactcg---------------------ccgtgtcgagttcagg 179  Q
    ||| |||||||||||||||| ||||||||||||||||||| |||| ||||| |||||||||||                     ||||| ||||||||||    
T  10292 ctcgacaactcgtgcaacaatggtcgcaaaatctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctccccgtggcgagttcagg 10193  T
Q  180 tcagaatcccacaagtttcattccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    |||||||||||||||||| |||||||||| |||| ||||||| ||||||||||||||||||||||||    
T  10192 tcagaatcccacaagtttaattccaggttcaatctcatcctacattctttcctaatcattattagac 10126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 929 - 767
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    |||||||||||||| ||||| |||||||| |||||||||||||||||||  ||||||||| | ||| ||||||||| |||||||| | ||| ||||||||    
T  929 cattatatcacatcgtaatcgacatcaacacatcttaaacagcttcacatatcataaatagcatcaccattaagtctcaatactacctcaaggttcaact 830  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaat-ctaacaagacactttgtttttgggtcactc 162  Q
    ||||||| |||||||||||||||||| ||||| |||||||||| || ||||| | ||||||||    
T  829 ctcaacagctcgtgcaacaaaggtcgaaaaatcctaacaagactctctgtttctaggtcactc 767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 35 - 246
Target Start/End: Complemental strand, 11445 - 11213
Alignment:
Q  35 ttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaactctcaacaactcgtgcaacaaaggtcgcaaaatct 134  Q
    |||| ||||||||||| | |||| |||| |||||||||||||  ||| ||| || || ||||||||||| ||||||||||||||||||||||||||||||    
T  11445 ttaatcagcttcacagattataattaacctcatcattaagtcttaattctacccaaaggttcaactctctacaactcgtgcaacaaaggtcgcaaaatct 11346  T
Q  135 aacaagacactttgtttttgggtca---------------------ctcgccgtgtcgagttcaggtcagaatcccacaagtttcattccaggtttaatc 213  Q
    |||||| |||||||||| || ||||                     |||||| || |||||||||||||| |||||||||||||||||||||||| ||||    
T  11345 aacaagtcactttgtttctgtgtcactcgcgaggtgagagcctcttctcgccttggcgagttcaggtcagtatcccacaagtttcattccaggttcaatc 11246  T
Q  214 acatcctagattctttcctaatcattattagac 246  Q
     ||||||| ||||||||||||||||||||||||    
T  11245 tcatcctacattctttcctaatcattattagac 11213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 81; Significance: 3e-38; HSPs: 2)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 16566 - 16402
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||||||||   |||| |||| ||||||||||||| |||||||| ||||| ||||||||    
T  16566 cattatatcacatcaaaatcaacatcaacacatcttaaacagcttcacagactataattaacatcatcattaagtctcaatactaccccaaggttcaact 16467  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaat-ctaacaagacactttgtttttgggtcactcgc 164  Q
    |  ||||||| |||| ||| || ||||||||| | |||||| |||| ||||||||||||||||||    
T  16466 cctaacaacttgtgcgacacagatcgcaaaatcccaacaaggcactctgtttttgggtcactcgc 16402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 246
Target Start/End: Complemental strand, 16334 - 16288
Alignment:
Q  200 ttccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||||||| |||| ||| ||| ||||||||||||||||||||||||    
T  16334 ttccaggttcaatctcattctaaattctttcctaatcattattagac 16288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 81; Significance: 3e-38; HSPs: 2)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 27985 - 28149
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    |||||||||||||||||||||||||||||  |||||||||| |||||||||| |||| |||| ||||||||||||| |||||||| ||||| ||||||||    
T  27985 cattatatcacatcataatcaacatcaacaaatcttaaacaacttcacaggttataattaacatcatcattaagtctcaatactaccccaaggttcaact 28084  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaat-ctaacaagacactttgtttttgggtcactcgc 164  Q
    || ||||||| |||| ||| || | ||||||| || ||||| |||| ||||| ||||||||||||    
T  28085 cttaacaacttgtgcgacacagattgcaaaatcctgacaaggcactctgtttctgggtcactcgc 28149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 246
Target Start/End: Original strand, 28924 - 28968
Alignment:
Q  202 ccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||||| |||| ||| ||| ||||||||||||||||||||||||    
T  28924 ccaggttcaatctcattctacattctttcctaatcattattagac 28968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 6 - 164
Target Start/End: Original strand, 10323 - 10482
Alignment:
Q  6 tatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaactctcaa 105  Q
    |||||||||||||||||||||||| |||||||||||||||||||| | || | |||| |||| |||||||| |||||||| ||||| |||||||||| ||    
T  10323 tatcacatcataatcaacatcaacacatcttaaacagcttcacagattattattaacatcattattaagtctcaatactaccccaaggttcaactcttaa 10422  T
Q  106 caactcgtgcaacaaaggtcgcaaaat-ctaacaagacactttgtttttgggtcactcgc 164  Q
    ||||| |||| ||| || ||||||||| |||||||| |||||||||| | ||||||||||    
T  10423 caacttgtgcgacacagatcgcaaaatcctaacaaggcactttgtttctaggtcactcgc 10482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 2 - 246
Target Start/End: Complemental strand, 15430 - 15165
Alignment:
Q  2 attatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagt-tcaact 100  Q
    |||||||||||||||||||| || ||||  |||||| |||||||||||| | |||| |||| | || ||||||||  ||| ||| ||||| |  ||||||    
T  15430 attatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaaccttattattaagtcttaatccta-cccaacgagtcaact 15332  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtcactcgc---------------------cgtgtcgagttcagg 179  Q
    ||| |||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||||||                     |||| ||||||||||    
T  15331 ctcgacaactcgtgcaacaaaggtcgcaaaatctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctctccgtggcgagttcagg 15232  T
Q  180 tcagaatcccacaagtttcattccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||||||| |||||||| |||||||||| |||| ||||||| ||||||||||||||||||||||||    
T  15231 tcagaatcctacaagttttattccaggttcaatctcatcctacattctttcctaatcattattagac 15165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 77; Significance: 7e-36; HSPs: 3)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 4662 - 4794
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| | |||| |||| ||||||||||||| |||||||| ||||| ||||||||    
T  4662 cattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaacatcatcattaagtctcaatactaccccaaggttcaact 4761  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaatc 133  Q
    || ||||||| |||| |||  | ||||||||||    
T  4762 cttaacaacttgtgcgacactgatcgcaaaatc 4794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 12244 - 12376
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| | |||| |||| ||||||||||||| |||||||| ||||| ||||||||    
T  12244 cattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaacatcatcattaagtctcaatactaccccaaggttcaact 12343  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaatc 133  Q
    || ||||||| |||| |||  | ||||||||||    
T  12344 cttaacaacttgtgcgacactgatcgcaaaatc 12376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 22196 - 22328
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| | |||| |||| ||||||||||||| |||||||| ||||| ||||||||    
T  22196 cattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaacatcatcattaagtctcaatactaccccaaggttcaact 22295  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaatc 133  Q
    || ||||||| |||| |||  | ||||||||||    
T  22296 cttaacaacttgtgcgacactgatcgcaaaatc 22328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 39631 - 39795
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| || | |||| |||| |||| |||||||| |||||||| ||||| |||||||     
T  39631 cattatatcacatcataatcaacatcaacacatcttaaacagcttcatagattataattaacatcattattaagtctcaatactaccccaaggttcaacc 39730  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaat-ctaacaagacactttgtttttgggtcactcgc 164  Q
    || ||||||| |||| ||| || ||||||||| || ||||| |||| ||||| ||||||||||||    
T  39731 cttaacaacttgtgcgacacagatcgcaaaatcctgacaaggcactctgtttctgggtcactcgc 39795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 75181 - 75017
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| || | |||| |||| |||| |||||||| |||||||| ||||| |||||||     
T  75181 cattatatcacatcataatcaacatcaacacatcttaaacagcttcatagattataattaacatcattattaagtctcaatactaccccaaggttcaacc 75082  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaat-ctaacaagacactttgtttttgggtcactcgc 164  Q
    || ||||||| |||| ||| || ||||||||| || ||||| |||| ||||| ||||||||||||    
T  75081 cttaacaacttgtgcgacacagatcgcaaaatcctgacaaggcactctgtttctgggtcactcgc 75017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 74; Significance: 5e-34; HSPs: 2)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 3 - 164
Target Start/End: Original strand, 6767 - 6928
Alignment:
Q  3 ttatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaactct 102  Q
    |||||||||||||||||||||| ||||  ||| || ||||||| |||| | ||||||||| | |||||||| ||  ||| ||| || || ||||||||||    
T  6767 ttatatcacatcataatcaacaacaacatatcatatacagctttacagattataaataaccttatcattaaatcttaatcctacccaaaggttcaactct 6866  T
Q  103 caacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtcactcgc 164  Q
    | |||||||||||||||||||||||||||||||||| | |||| ||||| ||||||||||||    
T  6867 cgacaactcgtgcaacaaaggtcgcaaaatctaacatgtcactctgtttatgggtcactcgc 6928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 160 - 246
Target Start/End: Original strand, 6945 - 7031
Alignment:
Q  160 ctcgccgtgtcgagttcaggtcagaatcccacaagtttcattccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||||||| |||||||||||||| ||||| ||||||| |||||||||| |||| ||||||| |||| |||||||| ||||||||||    
T  6945 ctcgccgtggcgagttcaggtcagcatccctcaagtttaattccaggttcaatctcatcctacattccttcctaataattattagac 7031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 5004 - 5269
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||| | |||  ||||  | ||||||||||  | | ||| || || ||| ||      
T  5004 cattatatcacatcataatcaacaacaacacatcttaaacagcttcacagattatagctaaccccttcattaagtcttattgctagccaaaggtttaatc 5103  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtcactcgc---------------------cgtgtcgagttcagg 179  Q
    |||||||||||||||||||||||| |||||| |||||||| |||| ||||| | ||||||||||                     |||| ||||||||||    
T  5104 ctcaacaactcgtgcaacaaaggtggcaaaa-ctaacaagtcactctgtttctaggtcactcgcgaggcaagagcctctactcgccgtggcgagttcagg 5202  T
Q  180 tcagaatcccacaagtttcattccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    |||||| | |||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||    
T  5203 tcagaacctcacaagtttcattccaggttcaatctcatcctacattctttcctaatcattattagac 5269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 13650 - 13813
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    |||||||||||||||||||||||| | ||  |||||| |||||||||||| | |||| |||| ||||  |||||||  ||| ||| |  || ||||||||    
T  13650 cattatatcacatcataatcaacaacgacatatcttatacagcttcacagattataattaacctcattgttaagtcttaatcctaccgaaaggttcaact 13749  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtcactcgc 164  Q
    ||| ||||||||||||||||| |||||||||||||||||| |||| ||||| |||||| |||||    
T  13750 ctcgacaactcgtgcaacaaaagtcgcaaaatctaacaagtcactctgtttctgggtcgctcgc 13813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 160 - 246
Target Start/End: Original strand, 13830 - 13916
Alignment:
Q  160 ctcgccgtgtcgagttcaggtcagaatcccacaagtttcattccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||||||| ||||||||| |||||||| ||||||||| |||||||||| |||| ||| ||| || |||||||||||||||||||||    
T  13830 ctcgccgtggcgagttcagctcagaatctcacaagtttaattccaggttcaatctcatgctacatcctttcctaatcattattagac 13916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 64; Significance: 4e-28; HSPs: 2)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 2107 - 2270
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    ||||||||| |||||||||||||| ||||  ||| || ||||||| |||  | || |||||| | |||||||||||  ||| ||| || || ||||||||    
T  2107 cattatatctcatcataatcaacaacaacatatcatatacagctttacatattattaataaccttatcattaagtcttaatcctacccaaaggttcaact 2206  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtcactcgc 164  Q
    ||| |||||||||||||||||||||||||||||||||| | |||| ||||| | ||||||||||    
T  2207 ctcgacaactcgtgcaacaaaggtcgcaaaatctaacatgtcactctgtttctaggtcactcgc 2270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 160 - 246
Target Start/End: Original strand, 2287 - 2373
Alignment:
Q  160 ctcgccgtgtcgagttcaggtcagaatcccacaagtttcattccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||||||| |||||||||||||| ||||| ||||||| |||||||||| |||| ||||||| |||| |||||||| ||||||||||    
T  2287 ctcgccgtggcgagttcaggtcagcatccctcaagtttaattccaggttcaatctcatcctacattccttcctaattattattagac 2373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 1018 - 752
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    ||||||| |||||||||||||||| ||||  || ||| |||||||||||| | |||  |||| ||||  ||||| |  ||| ||| || |  ||||||||    
T  1018 cattataacacatcataatcaacaacaacatattttatacagcttcacagattatagttaacctcattcttaagacttaatcctacccaagggttcaact 919  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtca---------------------ctcgccgtgtcgagttcagg 179  Q
    ||| |||| ||||||||||||||| ||||||||||||||| |||| ||||| ||||| |                     ||||||||| ||||||||||    
T  918 ctcgacaaatcgtgcaacaaaggttgcaaaatctaacaagtcactctgtttctgggttactcgcgaggcgagagcctctgctcgccgtggcgagttcagg 819  T
Q  180 tcagaatcccacaagtttcattccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||||| |||||||||| |||||||||| |||| ||||||| ||||||||||||||||||||||||    
T  818 tcagaattccacaagtttaattccaggttcaatctcatcctacattctttcctaatcattattagac 752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 38 - 164
Target Start/End: Original strand, 20595 - 20721
Alignment:
Q  38 aacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaactctcaacaactcgtgcaacaaaggtcgcaaaatctaac 137  Q
    ||||||||||||| | |||  |||| |||||||||||||  ||| |||| |||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  20595 aacagcttcacagattatagttaacatcatcattaagtcttaatgctattccaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaaatctaac 20694  T
Q  138 aagacactttgtttttgggtcactcgc 164  Q
    ||| |||| ||||| | |||| |||||    
T  20695 aaggcactctgtttctaggtcgctcgc 20721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 160 - 246
Target Start/End: Original strand, 20738 - 20835
Alignment:
Q  160 ctcgccgtgtcgagttcaggtcagaatcccacaagtttca-----------ttccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||||||| ||||||||||||||||||||||||||||||           ||||||||| |||| ||||||| ||||||||||||||||||||||||    
T  20738 ctcgccgtggcgagttcaggtcagaatcccacaagtttcattctataatctttccaggttcaatctcatcctacattctttcctaatcattattagac 20835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 90 - 357
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    |||||||||||||||||||||||| ||||  |||||| ||| |||||||| | |||  |||| ||||  |||||||  ||| ||| || || ||||||||    
T  90 cattatatcacatcataatcaacaacaacatatcttatacaacttcacagattatacttaacctcattgttaagtcttaatcctacccaaaggttcaact 189  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaa-tctaacaagacactttgtttttgggtcact---------------------cgccgtgtcgagttcag 178  Q
     || |||||||||||||||||||| |||||| ||||||||| |||| |  || |||||||||                     |||| || |||||||||    
T  190 gtcgacaactcgtgcaacaaaggttgcaaaaatctaacaagtcactcttattatgggtcacttgcgaggcgagagcctctgctcgccatggcgagttcag 289  T
Q  179 gtcagaatcccacaagtttcattccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||||||||||||||||| ||||||| || |||| ||||||| ||||||||||||||||||||||||    
T  290 gtcagaatcccacaagtttaattccagattcaatctcatcctacattctttcctaatcattattagac 357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 4866 - 5133
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    |||||||||||||||||||||||| ||||  |||||| ||| |||||||| | |||  |||| ||||  |||||||  ||| ||| || || ||||||||    
T  4866 cattatatcacatcataatcaacaacaacatatcttatacaacttcacagattatacttaacctcattgttaagtcttaatcctacccaaaggttcaact 4965  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaa-tctaacaagacactttgtttttgggtcact---------------------cgccgtgtcgagttcag 178  Q
     || |||||||||||||||||||| |||||| ||||||||| |||| |  || |||||||||                     |||| || |||||||||    
T  4966 gtcgacaactcgtgcaacaaaggttgcaaaaatctaacaagtcactcttattatgggtcacttgcgaggcgagagcctctgctcgccatggcgagttcag 5065  T
Q  179 gtcagaatcccacaagtttcattccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||||||||||||||||| ||||||| || |||| ||||||| ||||||||||||||||||||||||    
T  5066 gtcagaatcccacaagtttaattccagattcaatctcatcctacattctttcctaatcattattagac 5133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 4679 - 4810
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaa-cagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaac 99  Q
    |||||||||||||||| ||||||||||||  |||||||| |||| |||||  | |||| |||| || ||| |||||| |||||||| | ||| |||||||    
T  4679 cattatatcacatcatgatcaacatcaac--atcttaaaacagcctcacaaattataattaacatcttcaataagtctcaatactacctcaaggttcaac 4776  T
Q  100 tctcaacaactcgtgcaacaaaggtcgcaaaatc 133  Q
    ||| ||||||||||||||||||||||||||||||    
T  4777 tcttaacaactcgtgcaacaaaggtcgcaaaatc 4810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 32219 - 32382
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    |||||||||||||||||||||||| | ||  |||||| |||||||||||| | |||| |||| ||||  |||||||  ||| ||| || |  ||||||||    
T  32219 cattatatcacatcataatcaacaacgacatatcttatacagcttcacagattataattaacctcattgttaagtcttaatcctacccaagggttcaact 32318  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtcactcgc 164  Q
    ||| |||||| | |||||||||||||||||||| || |||  ||| ||||| ||||||||||||    
T  32319 ctcgacaactagagcaacaaaggtcgcaaaatcaaaaaagtaactctgtttctgggtcactcgc 32382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 172 - 246
Target Start/End: Original strand, 32411 - 32485
Alignment:
Q  172 agttcaggtcagaatcccacaagtttcattccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    |||||| ||||||||||||||||||| |||||||||| |||| ||||| | ||||||||||| ||||||||||||    
T  32411 agttcaagtcagaatcccacaagtttaattccaggttcaatctcatcccacattctttcctagtcattattagac 32485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 164 - 246
Target Start/End: Original strand, 47325 - 47407
Alignment:
Q  164 ccgtgtcgagttcaggtcagaatcccacaagtttcattccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||| |||| ||||||||||||||||||||||| |||||||||| |||| ||||||| |||| |||||||||||||||||||    
T  47325 ccgtggcgagctcaggtcagaatcccacaagtttaattccaggttcaatctcatcctacattcattcctaatcattattagac 47407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 93 - 164
Target Start/End: Original strand, 47233 - 47304
Alignment:
Q  93 gttcaactctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtcactcgc 164  Q
    ||||||||||| ||||||||||||||||||||||| |  ||||||||| |||| || |||||||||||||||    
T  47233 gttcaactctcgacaactcgtgcaacaaaggtcgccatttctaacaagtcactctggttttgggtcactcgc 47304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 87 - 161
Target Start/End: Complemental strand, 51764 - 51690
Alignment:
Q  87 cccaaagttcaactctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtcact 161  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||||||||||| |||| ||||| |||||||||    
T  51764 cccaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaaatctaacaagtcactctgtttctgggtcact 51690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 160 - 202
Target Start/End: Complemental strand, 51670 - 51628
Alignment:
Q  160 ctcgccgtgtcgagttcaggtcagaatcccacaagtttcattc 202  Q
    ||||||||| ||||||||||||| |||||||||||||||||||    
T  51670 ctcgccgtggcgagttcaggtcaaaatcccacaagtttcattc 51628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0718 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0718
Description:

Target: scaffold0718; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 170 - 246
Target Start/End: Complemental strand, 4907 - 4831
Alignment:
Q  170 cgagttcaggtcagaatcccacaagtttcattccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||||||||||||||||||| |||||  |||||||||| |||| ||||||| ||||||||||||||||||||||||    
T  4907 cgagttcaggtcagaatcccataagttcaattccaggttcaatctcatcctacattctttcctaatcattattagac 4831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0718; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 93 - 164
Target Start/End: Complemental strand, 5005 - 4934
Alignment:
Q  93 gttcaactctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtcactcgc 164  Q
    ||||||||||| ||||||||||||||||||||| ||||||| || ||| |||| ||||| || |||||||||    
T  5005 gttcaactctcgacaactcgtgcaacaaaggtctcaaaatccaataagtcactctgtttctgtgtcactcgc 4934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 158 - 246
Target Start/End: Complemental strand, 13385 - 13297
Alignment:
Q  158 cactcgccgtgtcgagttcaggtcagaatcccacaagtttcattccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||||||| | | |||||||||||| ||||||||||||||||| |||| | |||| ||||||| ||||||||||||||||||||||||    
T  13385 cactcgccggggcaagttcaggtcaggatcccacaagtttcatttcaggctcaatctcatcctacattctttcctaatcattattagac 13297  T

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Target: scaffold0351 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 16434 - 16597
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    ||||||| |||||||||||||||| ||||  ||||||  ||||||||||| | |||  |||| |||| ||||||||  ||| ||| || |  ||||||||    
T  16434 cattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattattaagtcttaatcctacccaagcgttcaact 16533  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtcactcgc 164  Q
    ||| | || |||||||||||||||| ||||||| |||||| |||| ||||| | ||||||||||    
T  16534 ctcgagaaatcgtgcaacaaaggtcacaaaatccaacaagtcactctgtttctaggtcactcgc 16597  T

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Target: scaffold0351; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 160 - 246
Target Start/End: Original strand, 16614 - 16700
Alignment:
Q  160 ctcgccgtgtcgagttcaggtcagaatcccacaagtttcattccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||||||| ||||||| ||||| ||||||| |||||| ||| |||||| |||| | ||||| ||||||||||||||||||||||||    
T  16614 ctcgccgtgccgagttctggtcaaaatcccataagtttaatttcaggttcaatctcgtcctacattctttcctaatcattattagac 16700  T

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Target: scaffold0032 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 160 - 246
Target Start/End: Original strand, 51914 - 52000
Alignment:
Q  160 ctcgccgtgtcgagttcaggtcagaatcccacaagtttcattccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||||||| |||| |||||| ||||||||  ||||||||||||||||| |||| | ||||| ||||||||||||||||||||||||    
T  51914 ctcgccgtggcgagctcaggttagaatcccgtaagtttcattccaggttcaatctcgtcctacattctttcctaatcattattagac 52000  T

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Target: scaffold0032; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 100 - 164
Target Start/End: Original strand, 51833 - 51897
Alignment:
Q  100 tctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtcactcgc 164  Q
    |||| ||||||||||||||||| |||||||||||||||||| |||| ||||| ||||||||||||    
T  51833 tctcgacaactcgtgcaacaaaagtcgcaaaatctaacaagtcactctgtttctgggtcactcgc 51897  T

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Target: scaffold0908 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0908
Description:

Target: scaffold0908; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 3152 - 3103
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacag 50  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  3152 cattatatcacatcataatcaacatcaacacatcttaaacagcttcacag 3103  T

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Target: scaffold0120 (Bit Score: 46; Significance: 2e-17; HSPs: 4)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 93 - 161
Target Start/End: Original strand, 16334 - 16403
Alignment:
Q  93 gttcaactctcaacaactcgtgcaacaaaggtcgc-aaaatctaacaagacactttgtttttgggtcact 161  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||||||| || ||||| |||||||||    
T  16334 gttcaactctcaacaactcgtgcaacaaaggtcgcaaaaacctaacaagactctctgtttctgggtcact 16403  T

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Target: scaffold0120; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 32924 - 32761
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaac-agcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaac 99  Q
    ||||||| |||||||| ||||||||||  ||||| ||||  |||||||||| | |||| ||||  | ||| |||||  |||||||| ||||| |||||||    
T  32924 cattataacacatcatgatcaacatca--gcatcataaaatagcttcacagattataactaacaccttcaataagtttcaatactaccccaaggttcaac 32827  T
Q  100 tctcaacaactcgtgcaacaaaggtcgcaaaatc-taacaagacactttgtttttgggtcactcgc 164  Q
    ||| ||||| | |||| ||| || |||||||||| |||||||||| | ||||| ||||||||||||    
T  32826 tcttaacaattggtgcgacacagatcgcaaaatcctaacaagacattctgtttatgggtcactcgc 32761  T

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Target: scaffold0120; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 46081 - 46244
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaac-agcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaac 99  Q
    ||||||| |||||||| ||||||||||  ||||| ||||  |||||||||| | |||| ||||  | ||| |||||  |||||||| ||||| |||||||    
T  46081 cattataacacatcatgatcaacatca--gcatcataaaatagcttcacagattataactaacaccttcaataagtttcaatactaccccaaggttcaac 46178  T
Q  100 tctcaacaactcgtgcaacaaaggtcgcaaaatc-taacaagacactttgtttttgggtcactcgc 164  Q
    ||| ||||| | |||| ||| || |||||||||| |||||||||| | ||||| ||||||||||||    
T  46179 tcttaacaattggtgcgacacagatcgcaaaatcctaacaagacattctgtttatgggtcactcgc 46244  T

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Target: scaffold0120; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 246
Target Start/End: Original strand, 16473 - 16519
Alignment:
Q  200 ttccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||||||| |||| | ||||| ||||||||||||||||||||||||    
T  16473 ttccaggttcaatctcgtcctacattctttcctaatcattattagac 16519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 1441 - 1604
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    ||||||| ||| |||||||||||| ||||  ||||||  |||||||| || | |||  |||| ||||  |||||||  ||| ||| || |  || |||||    
T  1441 cattataacacttcataatcaacaacaacatatcttattcagcttcatagattatagttaacctcattcttaagtcttaatcctacccaagggtccaact 1540  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtcactcgc 164  Q
    ||| |||||||||||||||||||||||||| || |||||| |||| ||||| | ||||||||||    
T  1541 ctcgacaactcgtgcaacaaaggtcgcaaactccaacaagtcactctgtttctaggtcactcgc 1604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 7418 - 7581
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggtcataaataacgtcatcattaagtcccaatactatcccaaagttcaact 100  Q
    ||||||| ||| |||||||||||| ||||  ||||||  |||||||| || | |||  |||| ||||  |||||||  ||| ||| || |  || |||||    
T  7418 cattataacacttcataatcaacaacaacatatcttattcagcttcatagattatagttaacctcattcttaagtcttaatcctacccaagggtccaact 7517  T
Q  101 ctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagacactttgtttttgggtcactcgc 164  Q
    ||| |||||||||||||||||||||||||| || |||||| |||| ||||| | ||||||||||    
T  7518 ctcgacaactcgtgcaacaaaggtcgcaaactccaacaagtcactctgtttctaggtcactcgc 7581  T

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Target: scaffold0327 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 3496 - 3424
Alignment:
Q  1 cattatatcacatcataatcaacatcaacgcatctt-aaacagcttcacaggtcataaataacgtcatcatta 72  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||| || | |||| |||| |||||||||    
T  3496 cattatatcacatcataatcaacatcaacacatcttaaaacagcttcatagattataattaacatcatcatta 3424  T

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Target: scaffold0012 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 133
Target Start/End: Original strand, 225643 - 225694
Alignment:
Q  82 actatcccaaagttcaactctcaacaactcgtgcaacaaaggtcgcaaaatc 133  Q
    |||| ||||| ||||||||||||||||||||||| |||||| ||||||||||    
T  225643 actaccccaaggttcaactctcaacaactcgtgcgacaaagatcgcaaaatc 225694  T

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Target: scaffold0876 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 200 - 246
Target Start/End: Complemental strand, 2820 - 2774
Alignment:
Q  200 ttccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||||||| |||| ||||||| ||||||||||||||||||||||||    
T  2820 ttccaggttcaatctcatcctacattctttcctaatcattattagac 2774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0627 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0627
Description:

Target: scaffold0627; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 200 - 246
Target Start/End: Original strand, 290 - 336
Alignment:
Q  200 ttccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||||||| |||| ||||||| ||||||||||||||||||||||||    
T  290 ttccaggttcaatctcatcctacattctttcctaatcattattagac 336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 200 - 246
Target Start/End: Complemental strand, 18693 - 18647
Alignment:
Q  200 ttccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||||||| |||| ||||||| ||||||||||||||||||||||||    
T  18693 ttccaggttcaatctcatcctacattctttcctaatcattattagac 18647  T

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Target: scaffold0031 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 133
Target Start/End: Complemental strand, 20310 - 20259
Alignment:
Q  82 actatcccaaagttcaactctcaacaactcgtgcaacaaaggtcgcaaaatc 133  Q
    |||||||||| |||||||||||||| |||||||| ||||||  |||||||||    
T  20310 actatcccaaggttcaactctcaacgactcgtgcgacaaagaccgcaaaatc 20259  T

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Target: scaffold0839 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 246
Target Start/End: Complemental strand, 1812 - 1766
Alignment:
Q  200 ttccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||||||| |||| ||| ||| ||||||||||||||||||||||||    
T  1812 ttccaggttcaatctcattctacattctttcctaatcattattagac 1766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 246
Target Start/End: Original strand, 414 - 460
Alignment:
Q  200 ttccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||||||| |||| ||||||| ||||||||||||||| ||||||||    
T  414 ttccaggttcaatctcatcctacattctttcctaatcaatattagac 460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 246
Target Start/End: Complemental strand, 12544 - 12498
Alignment:
Q  200 ttccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||||||| |||| ||||||| ||||||||||||||| ||||||||    
T  12544 ttccaggttcaatctcatcctacattctttcctaatcaatattagac 12498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 246
Target Start/End: Complemental strand, 8029 - 7983
Alignment:
Q  200 ttccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||||||| |||| ||||||| ||||||||||||||| ||||||||    
T  8029 ttccaggttcaatctcatcctacattctttcctaatcaatattagac 7983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 246
Target Start/End: Complemental strand, 80067 - 80021
Alignment:
Q  200 ttccaggtttaatcacatcctagattctttcctaatcattattagac 246  Q
    ||||||||| |||| ||||||| ||||||||||||||| ||||||||    
T  80067 ttccaggttcaatctcatcctacattctttcctaatcaatattagac 80021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 246
Target Start/End: Original strand, 10540 - 10576
Alignment:
Q  210 aatcacatcctagattctttcctaatcattattagac 246  Q
    |||| ||||||| ||||||||||||||||||||||||    
T  10540 aatctcatcctacattctttcctaatcattattagac 10576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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