View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8535_low_3 (Length: 496)

Name: NF8535_low_3
Description: NF8535
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8535_low_3
NF8535_low_3
[»] chr1 (68 HSPs)
chr1 (113-476)||(9828068-9828438)
chr1 (216-361)||(9823927-9824073)
chr1 (266-381)||(9813463-9813579)
chr1 (113-214)||(5898204-5898301)
chr1 (113-210)||(1486646-1486744)
chr1 (137-214)||(40917803-40917881)
chr1 (142-213)||(37598879-37598951)
chr1 (137-212)||(47989551-47989627)
chr1 (137-212)||(18556385-18556461)
chr1 (142-213)||(34741894-34741966)
chr1 (142-211)||(40258874-40258944)
chr1 (137-213)||(6427518-6427595)
chr1 (401-468)||(9813574-9813641)
chr1 (142-212)||(18337377-18337448)
chr1 (142-212)||(22515827-22515898)
chr1 (140-214)||(25934673-25934748)
chr1 (142-212)||(32461393-32461464)
chr1 (142-212)||(46348323-46348394)
chr1 (142-210)||(42359391-42359460)
chr1 (142-213)||(1815305-1815377)
chr1 (174-214)||(22881565-22881605)
chr1 (164-212)||(48450550-48450598)
chr1 (217-336)||(9707157-9707276)
chr1 (113-212)||(25361910-25362012)
chr1 (116-212)||(19562556-19562653)
chr1 (137-213)||(31694638-31694715)
chr1 (142-214)||(51410073-51410146)
chr1 (137-212)||(5944337-5944413)
chr1 (415-467)||(9824076-9824128)
chr1 (147-210)||(16297223-16297287)
chr1 (143-217)||(2896056-2896131)
chr1 (137-207)||(9629834-9629905)
chr1 (142-212)||(18190048-18190119)
chr1 (177-215)||(21365989-21366027)
chr1 (176-214)||(22947813-22947851)
chr1 (143-212)||(27965940-27966010)
chr1 (159-212)||(34712323-34712377)
chr1 (113-212)||(36878485-36878585)
chr1 (113-198)||(40181895-40181976)
chr1 (115-212)||(42004882-42004980)
chr1 (142-210)||(29163323-29163392)
chr1 (175-212)||(35702542-35702579)
chr1 (158-211)||(48415667-48415720)
chr1 (148-207)||(26830641-26830701)
chr1 (115-213)||(40747706-40747806)
chr1 (149-211)||(6414932-6414995)
chr1 (175-214)||(15765840-15765879)
chr1 (113-148)||(17705586-17705621)
chr1 (113-213)||(20157283-20157385)
chr1 (164-214)||(29144318-29144369)
chr1 (142-212)||(38078601-38078672)
chr1 (163-213)||(46940747-46940798)
chr1 (163-212)||(2218297-2218347)
chr1 (154-211)||(10577676-10577734)
chr1 (154-211)||(12919005-12919063)
chr1 (174-212)||(16812637-16812675)
chr1 (113-212)||(17831462-17831566)
chr1 (173-215)||(30359445-30359487)
chr1 (148-213)||(31015091-31015157)
chr1 (50-88)||(35919344-35919382)
chr1 (184-213)||(7918153-7918182)
chr1 (159-215)||(9690210-9690267)
chr1 (158-210)||(17778617-17778670)
chr1 (137-200)||(6612112-6612176)
chr1 (176-212)||(9630561-9630597)
chr1 (155-214)||(18471356-18471416)
chr1 (137-212)||(41597410-41597486)
chr1 (142-213)||(43492433-43492505)
[»] chr8 (58 HSPs)
chr8 (137-212)||(22652030-22652106)
chr8 (137-212)||(29447498-29447574)
chr8 (137-214)||(29510231-29510309)
chr8 (137-212)||(34450961-34451037)
chr8 (142-212)||(3951476-3951547)
chr8 (137-212)||(27067231-27067305)
chr8 (142-214)||(5813640-5813713)
chr8 (137-212)||(15816058-15816134)
chr8 (113-212)||(41831875-41831975)
chr8 (113-212)||(11803283-11803389)
chr8 (113-210)||(3025575-3025668)
chr8 (148-213)||(8343381-8343447)
chr8 (113-212)||(26902104-26902210)
chr8 (158-212)||(39820493-39820547)
chr8 (113-212)||(14134723-14134818)
chr8 (137-212)||(21465466-21465542)
chr8 (113-212)||(11927015-11927121)
chr8 (142-212)||(24413499-24413570)
chr8 (138-212)||(28745553-28745628)
chr8 (137-211)||(29447040-29447115)
chr8 (142-212)||(36450694-36450765)
chr8 (142-196)||(44462151-44462206)
chr8 (142-196)||(44469684-44469739)
chr8 (142-211)||(13009423-13009493)
chr8 (142-212)||(37283755-37283823)
chr8 (142-210)||(926730-926799)
chr8 (142-210)||(20679337-20679406)
chr8 (142-214)||(40332239-40332312)
chr8 (142-213)||(4298829-4298897)
chr8 (114-212)||(12570438-12570542)
chr8 (142-204)||(126295-126358)
chr8 (148-214)||(22197669-22197736)
chr8 (154-200)||(22943301-22943348)
chr8 (142-211)||(43737752-43737822)
chr8 (154-214)||(18407779-18407840)
chr8 (164-212)||(40064032-40064081)
chr8 (137-212)||(11944719-11944795)
chr8 (145-212)||(12570664-12570732)
chr8 (114-212)||(16641909-16642008)
chr8 (174-214)||(27213606-27213646)
chr8 (145-212)||(31557047-31557115)
chr8 (158-208)||(12559044-12559095)
chr8 (177-212)||(31514938-31514973)
chr8 (142-212)||(33405324-33405395)
chr8 (164-213)||(8343037-8343087)
chr8 (174-212)||(17751737-17751775)
chr8 (174-212)||(17760724-17760762)
chr8 (174-212)||(25566911-25566949)
chr8 (164-213)||(30067967-30068017)
chr8 (115-210)||(44067542-44067644)
chr8 (140-212)||(6065586-6065659)
chr8 (176-209)||(13203700-13203733)
chr8 (142-210)||(15023199-15023268)
chr8 (136-212)||(18964232-18964309)
chr8 (140-211)||(2035795-2035866)
chr8 (149-208)||(4122182-4122242)
chr8 (174-210)||(16987994-16988030)
chr8 (175-207)||(31109463-31109495)
[»] chr6 (54 HSPs)
chr6 (142-216)||(4877991-4878065)
chr6 (113-214)||(17327588-17327690)
chr6 (137-214)||(8365446-8365524)
chr6 (141-214)||(10339052-10339126)
chr6 (137-214)||(18367890-18367968)
chr6 (137-212)||(16766751-16766827)
chr6 (142-209)||(32978842-32978910)
chr6 (113-212)||(7248382-7248488)
chr6 (142-212)||(24645529-24645600)
chr6 (142-212)||(28152146-28152217)
chr6 (142-212)||(34595182-34595253)
chr6 (137-210)||(5000557-5000631)
chr6 (113-212)||(9629407-9629513)
chr6 (146-211)||(17841530-17841596)
chr6 (142-215)||(28715343-28715417)
chr6 (154-214)||(8776906-8776967)
chr6 (137-212)||(8714034-8714110)
chr6 (137-212)||(9107299-9107375)
chr6 (113-211)||(31384944-31385048)
chr6 (115-212)||(34446591-34446690)
chr6 (117-209)||(8389411-8389503)
chr6 (137-212)||(3209442-3209518)
chr6 (137-212)||(5970037-5970113)
chr6 (113-212)||(7378003-7378098)
chr6 (113-211)||(9658903-9658998)
chr6 (113-212)||(10770607-10770709)
chr6 (113-212)||(13360313-13360407)
chr6 (137-212)||(16488519-16488595)
chr6 (137-212)||(34073278-34073352)
chr6 (115-211)||(1532266-1532366)
chr6 (137-214)||(10294161-10294239)
chr6 (143-212)||(17435259-17435329)
chr6 (158-211)||(31959214-31959268)
chr6 (167-212)||(6389806-6389851)
chr6 (115-210)||(12696350-12696446)
chr6 (142-213)||(16833356-16833428)
chr6 (160-212)||(28648350-28648402)
chr6 (163-209)||(9025448-9025495)
chr6 (177-212)||(10842617-10842652)
chr6 (113-210)||(7265535-7265628)
chr6 (178-212)||(7723199-7723233)
chr6 (175-213)||(8805523-8805561)
chr6 (176-214)||(10649371-10649409)
chr6 (138-207)||(11352416-11352486)
chr6 (176-213)||(426477-426514)
chr6 (164-212)||(7938170-7938219)
chr6 (142-214)||(13364643-13364716)
chr6 (140-212)||(26247477-26247550)
chr6 (117-199)||(3398646-3398729)
chr6 (176-212)||(5732474-5732510)
chr6 (142-213)||(6898220-6898292)
chr6 (141-212)||(9525958-9526030)
chr6 (142-214)||(12868614-12868691)
chr6 (137-208)||(23130405-23130477)
[»] chr4 (64 HSPs)
chr4 (113-212)||(36635348-36635449)
chr4 (142-212)||(23292926-23292997)
chr4 (115-212)||(24343533-24343632)
chr4 (137-215)||(24613627-24613706)
chr4 (137-211)||(30982808-30982883)
chr4 (113-215)||(22234816-22234925)
chr4 (119-214)||(53381528-53381625)
chr4 (148-211)||(14465006-14465070)
chr4 (137-214)||(19482722-19482800)
chr4 (116-211)||(3947702-3947798)
chr4 (117-212)||(3144587-3144683)
chr4 (142-212)||(12895214-12895285)
chr4 (155-212)||(715545-715603)
chr4 (155-212)||(752871-752929)
chr4 (137-212)||(5414101-5414177)
chr4 (137-219)||(16184874-16184957)
chr4 (159-209)||(28084589-28084640)
chr4 (142-212)||(28964188-28964259)
chr4 (154-212)||(29205528-29205587)
chr4 (174-213)||(30299010-30299049)
chr4 (174-213)||(30327878-30327917)
chr4 (142-212)||(34306744-34306815)
chr4 (142-212)||(49431074-49431145)
chr4 (119-211)||(12323944-12324038)
chr4 (159-212)||(12884347-12884401)
chr4 (137-210)||(19312389-19312463)
chr4 (142-214)||(16073442-16073515)
chr4 (155-214)||(3064866-3064926)
chr4 (142-208)||(20743210-20743278)
chr4 (174-213)||(5775303-5775342)
chr4 (137-207)||(30838264-30838335)
chr4 (165-212)||(34515811-34515858)
chr4 (142-212)||(35157925-35157996)
chr4 (166-212)||(37203324-37203371)
chr4 (169-211)||(4383442-4383484)
chr4 (143-212)||(8423658-8423728)
chr4 (165-214)||(11596295-11596345)
chr4 (115-212)||(19230241-19230342)
chr4 (162-210)||(22440559-22440608)
chr4 (163-212)||(23386228-23386277)
chr4 (154-214)||(35161096-35161157)
chr4 (113-174)||(40481660-40481721)
chr4 (176-212)||(824216-824252)
chr4 (113-212)||(903946-904052)
chr4 (142-212)||(2361915-2361986)
chr4 (142-208)||(12797282-12797349)
chr4 (164-214)||(18513173-18513224)
chr4 (154-212)||(18966569-18966628)
chr4 (142-212)||(30103297-30103368)
chr4 (176-211)||(35239202-35239237)
chr4 (174-213)||(40784034-40784073)
chr4 (162-207)||(3712458-3712504)
chr4 (160-210)||(7424724-7424774)
chr4 (174-212)||(28470446-28470484)
chr4 (159-212)||(42640589-42640643)
chr4 (142-210)||(4157197-4157266)
chr4 (142-210)||(4157484-4157553)
chr4 (159-199)||(21873315-21873356)
chr4 (159-199)||(21929176-21929217)
chr4 (142-213)||(4672024-4672096)
chr4 (137-212)||(15724483-15724559)
chr4 (176-204)||(17210039-17210067)
chr4 (176-212)||(18844423-18844459)
chr4 (137-212)||(46083920-46083996)
[»] chr3 (58 HSPs)
chr3 (137-217)||(41961574-41961655)
chr3 (113-215)||(40993272-40993370)
chr3 (117-210)||(29508472-29508567)
chr3 (142-212)||(55401123-55401194)
chr3 (113-212)||(27505270-27505370)
chr3 (141-210)||(4987222-4987292)
chr3 (142-212)||(10955000-10955074)
chr3 (137-212)||(34185052-34185128)
chr3 (142-212)||(11252024-11252095)
chr3 (142-212)||(20503513-20503584)
chr3 (137-214)||(14209167-14209245)
chr3 (137-214)||(28812569-28812647)
chr3 (137-212)||(14223788-14223864)
chr3 (160-212)||(27277780-27277832)
chr3 (113-212)||(35222962-35223057)
chr3 (142-212)||(13845465-13845536)
chr3 (137-211)||(14216946-14217021)
chr3 (137-211)||(14223075-14223150)
chr3 (137-212)||(16789066-16789141)
chr3 (115-212)||(21211314-21211413)
chr3 (158-211)||(15864897-15864950)
chr3 (155-211)||(15999951-16000008)
chr3 (154-210)||(28918063-28918120)
chr3 (174-211)||(34910398-34910435)
chr3 (162-214)||(40052380-40052433)
chr3 (143-218)||(8842378-8842454)
chr3 (113-165)||(34307763-34307815)
chr3 (115-212)||(25074815-25074914)
chr3 (113-211)||(8789489-8789585)
chr3 (163-212)||(11610578-11610628)
chr3 (137-210)||(13806290-13806363)
chr3 (143-212)||(18426998-18427068)
chr3 (145-214)||(26492143-26492213)
chr3 (113-205)||(3631708-3631796)
chr3 (115-206)||(12704597-12704690)
chr3 (140-212)||(25064964-25065037)
chr3 (154-214)||(49651714-49651775)
chr3 (176-212)||(4990912-4990948)
chr3 (142-213)||(7171549-7171621)
chr3 (137-212)||(8039764-8039840)
chr3 (137-188)||(14832153-14832205)
chr3 (174-214)||(14979230-14979270)
chr3 (137-212)||(15796223-15796299)
chr3 (137-212)||(17005548-17005624)
chr3 (148-212)||(5440967-5441033)
chr3 (159-212)||(8101892-8101946)
chr3 (115-210)||(24204983-24205074)
chr3 (142-210)||(25775557-25775624)
chr3 (142-214)||(52369834-52369908)
chr3 (114-212)||(2408590-2408688)
chr3 (164-212)||(4466540-4466589)
chr3 (163-212)||(8903506-8903554)
chr3 (115-152)||(41319306-41319343)
chr3 (137-192)||(2620004-2620060)
chr3 (137-212)||(9800094-9800170)
chr3 (137-208)||(11665998-11666070)
chr3 (184-212)||(21861666-21861694)
chr3 (165-208)||(33359826-33359870)
[»] chr7 (47 HSPs)
chr7 (142-212)||(598256-598327)
chr7 (113-214)||(5409769-5409871)
chr7 (142-213)||(15680857-15680929)
chr7 (137-212)||(24339696-24339772)
chr7 (148-212)||(43027404-43027469)
chr7 (113-214)||(9778524-9778626)
chr7 (142-212)||(21864856-21864927)
chr7 (113-212)||(32093954-32094055)
chr7 (125-212)||(1433490-1433578)
chr7 (142-212)||(21880200-21880271)
chr7 (155-212)||(29763129-29763187)
chr7 (142-211)||(32287404-32287474)
chr7 (142-211)||(18035806-18035875)
chr7 (137-212)||(2334304-2334379)
chr7 (115-212)||(7133212-7133311)
chr7 (140-210)||(26033392-26033463)
chr7 (137-214)||(7438760-7438838)
chr7 (115-207)||(13770717-13770810)
chr7 (142-211)||(22484073-22484143)
chr7 (113-211)||(32308144-32308249)
chr7 (163-212)||(40131939-40131989)
chr7 (142-214)||(33994260-33994333)
chr7 (126-209)||(2533761-2533844)
chr7 (168-212)||(29812598-29812642)
chr7 (113-211)||(20549815-20549909)
chr7 (138-211)||(11665370-11665444)
chr7 (176-214)||(35862034-35862072)
chr7 (164-212)||(6490786-6490835)
chr7 (155-211)||(20545185-20545242)
chr7 (161-212)||(14729770-14729822)
chr7 (113-212)||(18212973-18213068)
chr7 (137-212)||(25822709-25822785)
chr7 (154-212)||(17852060-17852119)
chr7 (139-170)||(26329354-26329385)
chr7 (145-213)||(1401076-1401143)
chr7 (158-212)||(23751964-23752018)
chr7 (174-212)||(28973881-28973919)
chr7 (178-212)||(30813882-30813916)
chr7 (159-208)||(40287306-40287356)
chr7 (175-212)||(3991395-3991432)
chr7 (147-199)||(7973076-7973129)
chr7 (163-207)||(11722073-11722118)
chr7 (115-148)||(12278861-12278894)
chr7 (115-174)||(5938498-5938558)
chr7 (184-212)||(19213884-19213912)
chr7 (142-213)||(26733352-26733424)
chr7 (137-208)||(27229244-27229316)
[»] scaffold0019 (1 HSPs)
scaffold0019 (137-214)||(71779-71857)
[»] chr2 (49 HSPs)
chr2 (137-214)||(37419797-37419875)
chr2 (137-212)||(26769565-26769641)
chr2 (137-212)||(35056922-35056998)
chr2 (142-212)||(18840953-18841024)
chr2 (142-210)||(2438661-2438730)
chr2 (142-211)||(28596517-28596587)
chr2 (113-213)||(28677933-28678034)
chr2 (148-212)||(42511322-42511387)
chr2 (137-212)||(21782744-21782820)
chr2 (142-212)||(24009343-24009414)
chr2 (138-212)||(30717459-30717534)
chr2 (142-212)||(38117099-38117170)
chr2 (113-213)||(20242666-20242762)
chr2 (142-213)||(15972921-15972993)
chr2 (137-212)||(24975255-24975330)
chr2 (142-212)||(37559025-37559096)
chr2 (137-211)||(44860374-44860449)
chr2 (113-212)||(41843465-41843565)
chr2 (137-212)||(11223793-11223868)
chr2 (143-210)||(19942314-19942382)
chr2 (158-210)||(23354926-23354978)
chr2 (137-212)||(34784911-34784987)
chr2 (137-212)||(36096304-36096380)
chr2 (164-211)||(23354582-23354629)
chr2 (115-188)||(5891738-5891812)
chr2 (142-199)||(12224271-12224329)
chr2 (137-210)||(15657918-15657992)
chr2 (143-212)||(27084318-27084388)
chr2 (148-212)||(16301097-16301161)
chr2 (142-213)||(34993921-34993993)
chr2 (140-214)||(4207913-4207988)
chr2 (142-204)||(5040782-5040845)
chr2 (140-212)||(22084756-22084832)
chr2 (148-211)||(35449561-35449627)
chr2 (144-209)||(17776648-17776714)
chr2 (159-212)||(28412422-28412476)
chr2 (174-212)||(34221463-34221501)
chr2 (113-214)||(37411182-37411279)
chr2 (152-212)||(15907851-15907912)
chr2 (176-213)||(19536360-19536397)
chr2 (177-214)||(20539630-20539667)
chr2 (19-48)||(34017744-34017773)
chr2 (143-214)||(37497169-37497242)
chr2 (163-212)||(38919287-38919336)
chr2 (175-211)||(3444827-3444863)
chr2 (176-212)||(10535685-10535721)
chr2 (185-213)||(18622694-18622722)
chr2 (149-212)||(19959881-19959945)
chr2 (137-212)||(32749754-32749830)
[»] scaffold0003 (1 HSPs)
scaffold0003 (137-212)||(241648-241724)
[»] scaffold0036 (1 HSPs)
scaffold0036 (137-210)||(9678-9752)
[»] chr5 (59 HSPs)
chr5 (143-212)||(17123097-17123166)
chr5 (137-212)||(39698595-39698671)
chr5 (142-212)||(21576685-21576756)
chr5 (117-203)||(43554549-43554636)
chr5 (137-215)||(36642689-36642767)
chr5 (114-213)||(14873542-14873642)
chr5 (142-210)||(21190998-21191067)
chr5 (113-212)||(31084347-31084447)
chr5 (136-212)||(32766872-32766949)
chr5 (142-214)||(43564929-43565002)
chr5 (137-212)||(7677759-7677835)
chr5 (137-212)||(21522804-21522880)
chr5 (137-212)||(21533370-21533446)
chr5 (142-209)||(39268541-39268609)
chr5 (137-211)||(3966557-3966632)
chr5 (137-211)||(21542084-21542159)
chr5 (137-209)||(18592127-18592200)
chr5 (137-208)||(30183603-30183675)
chr5 (137-211)||(6401552-6401627)
chr5 (154-212)||(16304366-16304425)
chr5 (113-210)||(23015926-23016024)
chr5 (142-212)||(42893408-42893479)
chr5 (113-167)||(5467959-5468013)
chr5 (117-200)||(15382507-15382592)
chr5 (164-213)||(39695950-39695999)
chr5 (137-212)||(21814315-21814391)
chr5 (161-212)||(35017110-35017162)
chr5 (148-210)||(43001859-43001922)
chr5 (113-210)||(30502330-30502423)
chr5 (113-210)||(30542673-30542766)
chr5 (117-214)||(36577610-36577707)
chr5 (176-213)||(10298633-10298670)
chr5 (148-212)||(30098391-30098456)
chr5 (137-213)||(40131675-40131752)
chr5 (137-188)||(12641728-12641780)
chr5 (161-204)||(17088358-17088402)
chr5 (165-212)||(19820328-19820376)
chr5 (176-212)||(22423764-22423800)
chr5 (118-161)||(9929649-9929692)
chr5 (154-212)||(21194063-21194122)
chr5 (164-210)||(21351852-21351899)
chr5 (147-213)||(27932288-27932355)
chr5 (142-208)||(30098982-30099049)
chr5 (177-216)||(40000489-40000528)
chr5 (157-214)||(15410375-15410433)
chr5 (113-210)||(18421779-18421876)
chr5 (137-210)||(19579755-19579829)
chr5 (113-214)||(28588612-28588709)
chr5 (137-213)||(37328774-37328849)
chr5 (165-214)||(38464311-38464361)
chr5 (141-212)||(2419913-2419986)
chr5 (175-208)||(4105341-4105374)
chr5 (154-210)||(24238603-24238660)
chr5 (148-212)||(39205939-39206004)
chr5 (178-214)||(6770621-6770657)
chr5 (161-212)||(17593663-17593715)
chr5 (162-213)||(23289997-23290049)
chr5 (176-212)||(24906252-24906288)
chr5 (145-212)||(42029803-42029871)
[»] scaffold0086 (1 HSPs)
scaffold0086 (137-212)||(2982-3058)
[»] scaffold0057 (1 HSPs)
scaffold0057 (137-214)||(24078-24157)
[»] scaffold0652 (1 HSPs)
scaffold0652 (142-211)||(403-473)
[»] scaffold0136 (1 HSPs)
scaffold0136 (137-213)||(3777-3854)
[»] scaffold0450 (1 HSPs)
scaffold0450 (137-212)||(8564-8640)
[»] scaffold0053 (1 HSPs)
scaffold0053 (142-212)||(8846-8917)
[»] scaffold0793 (1 HSPs)
scaffold0793 (155-212)||(4821-4879)
[»] scaffold0008 (1 HSPs)
scaffold0008 (137-210)||(263303-263377)
[»] scaffold0380 (1 HSPs)
scaffold0380 (155-214)||(8662-8722)
[»] scaffold0044 (1 HSPs)
scaffold0044 (113-205)||(53204-53303)
[»] scaffold0512 (1 HSPs)
scaffold0512 (142-212)||(4976-5047)
[»] scaffold0004 (1 HSPs)
scaffold0004 (147-217)||(92875-92946)
[»] scaffold0154 (1 HSPs)
scaffold0154 (139-212)||(13469-13543)
[»] scaffold0475 (1 HSPs)
scaffold0475 (142-213)||(3356-3428)
[»] scaffold0306 (1 HSPs)
scaffold0306 (113-215)||(13424-13528)
[»] scaffold0152 (1 HSPs)
scaffold0152 (113-215)||(21799-21903)
[»] scaffold0050 (1 HSPs)
scaffold0050 (142-209)||(70326-70394)
[»] scaffold0123 (1 HSPs)
scaffold0123 (113-212)||(44454-44560)
[»] scaffold0361 (1 HSPs)
scaffold0361 (147-212)||(14580-14646)
[»] scaffold0246 (1 HSPs)
scaffold0246 (113-174)||(19599-19660)
[»] scaffold0623 (1 HSPs)
scaffold0623 (137-211)||(5926-6001)
[»] scaffold0027 (1 HSPs)
scaffold0027 (177-212)||(46741-46776)
[»] scaffold0103 (1 HSPs)
scaffold0103 (113-170)||(51835-51890)
[»] scaffold0168 (1 HSPs)
scaffold0168 (177-214)||(21243-21280)


Alignment Details
Target: chr1 (Bit Score: 304; Significance: 1e-171; HSPs: 68)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 113 - 476
Target Start/End: Original strand, 9828068 - 9828438
Alignment:
Q  113 tcacataattcagtgtaattttatgtgtcg------tgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgc 205  Q
    ||||||||||||||||||||||||||||||      |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  9828068 tcacataattcagtgtaattttatgtgtcggtgtcgtgtccgtgtcagacacgacacgtgtccgacaccgggacacgtctaatccgaggagtgtccgtgc 9828167  T
Q  206 ttcataggtatacatagaccacaagaccaagtaaaataaacggaaaatgttgtttgacacgaatagcaacttcgcgaaaaataacaaacttttatgattg 305  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||| | |||||||||||| ||||||||||||||||| ||||||||    
T  9828168 ttcataggtctacatagaccacaagaccaagtaaaataaaaggaaaatgttgttcgacgcaaatagcaacttcacgaaaaataacaaacttatatgattg 9828267  T
Q  306 ctcaacttcatctttatcctcccgtgttttctgacaagtaggacaatgaaagtttggctattcttgaaaacacaagtgcaacattcttatgacatcacaa 405  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9828268 ctcaacttcatctttatcctcccgtgttttccgacaagtaggacaatgaaagtttggctattcttgaaaacacaagtgcaacattcttatgacatcacaa 9828367  T
Q  406 gcattaatataattgtaacttttctgcatacctgtcagcatcaaaagagctaaatccacgcccgttgcggt 476  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9828368 gcattaatataattgtaacttttctgcatacctgtcagcatcaaaagagctaaatccacgcccgttgcggt 9828438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 216 - 361
Target Start/End: Original strand, 9823927 - 9824073
Alignment:
Q  216 tacatagaccacaagaccaagtaaaataaacggaaaatgttgtttgacacgaatagcaacttcgcgaaaaataacaaacttttatg-attgctcaacttc 314  Q
    |||||| ||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||| |||| |||||||||||||    
T  9823927 tacatataccacaaaaccaagtaaaataaaaggaaagtgttgtttgacacgaatagcaacttcttgaaaaataacaaacttatatgaattgctcaacttc 9824026  T
Q  315 atctttatcctcccgtgttttctgacaagtaggacaatgaaagtttg 361  Q
    |||||||||||||||||||||| ||||| |||||||  |||||||||    
T  9824027 atctttatcctcccgtgttttccgacaaataggacatcgaaagtttg 9824073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 266 - 381
Target Start/End: Original strand, 9813463 - 9813579
Alignment:
Q  266 gaatagcaacttcgcgaaaaataacaaacttttatga-ttgctcaacttcatctttatcctcccgtgttttctgacaagtaggacaatgaaagtttggct 364  Q
    ||||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||| |||||||  |||||||||  |    
T  9813463 gaatagcaacttctcgaaaaataacaaacttatatgaattgctcaacttcatctttatcctcccgtgttttccgacaaataggacatcgaaagtttgcgt 9813562  T
Q  365 attcttgaaaacacaag 381  Q
    |||||| ||||||||||    
T  9813563 attcttaaaaacacaag 9813579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 113 - 214
Target Start/End: Complemental strand, 5898301 - 5898204
Alignment:
Q  113 tcacataattcagtgtaattttatgtgtcgtgtcggtgtcagacacgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgcttcata 211  Q
    |||||||||||||||||||| |||     | |||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| |||    
T  5898301 tcacataattcagtgtaattatat-----gcgtcggtgtcagacacgacacgtgtccaacaccgggacacgtctaatccgaggagtgtccgtgctttata 5898207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 113 - 210
Target Start/End: Complemental strand, 1486744 - 1486646
Alignment:
Q  113 tcacataattcagtgtaattttatgtgtcg-tgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcat 210  Q
    |||||||||||||||||||| || |||||| ||||| |||| ||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||    
T  1486744 tcacataattcagtgtaattataagtgtcggtgtcg-tgtcggacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtctgtgcttcat 1486646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 137 - 214
Target Start/End: Original strand, 40917803 - 40917881
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcataggt 214  Q
    |||||||||||||||  ||||||||||||||||||||| |||||||| |||||||||||| ||||||||||||||||||    
T  40917803 gtgtcgtgtcggtgttggacacgacacgtgtccgacaccgggacacgcctaatccgaggactgtccgtgcttcataggt 40917881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 142 - 213
Target Start/End: Original strand, 37598879 - 37598951
Alignment:
Q  142 gtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcatagg 213  Q
    ||||||||||| ||||||||||||||||||||  |||||||| ||||||||||||||||||||||||||||||    
T  37598879 gtgtcggtgtcggacacgacacgtgtccgacaatgggacacgcctaatccgaggagtgtccgtgcttcatagg 37598951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 137 - 212
Target Start/End: Original strand, 47989551 - 47989627
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    |||||||||||||||| |||||||||| |||| |||| ||||||||| |||||||||||||||||||||||||||||    
T  47989551 gtgtcgtgtcggtgtcggacacgacacatgtctgacatcgggacacgcctaatccgaggagtgtccgtgcttcatag 47989627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 137 - 212
Target Start/End: Complemental strand, 18556461 - 18556385
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    |||||||| ||||||||||| |||||||| |||||||| |||||||| |||||||||| ||||||||||||||||||    
T  18556461 gtgtcgtgacggtgtcagacccgacacgtatccgacactgggacacgcctaatccgagaagtgtccgtgcttcatag 18556385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 142 - 213
Target Start/End: Original strand, 34741894 - 34741966
Alignment:
Q  142 gtgtcggtgtcagacacgaca-cgtgtccgacacgggacacgtctaatccgaggagtgtccgtgcttcatagg 213  Q
    |||| |||||| ||||||||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  34741894 gtgttggtgtctgacacgacaacgtgtccgacacgggacacgcctaatccgaagagtgtccgtgcttcatagg 34741966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 40258944 - 40258874
Alignment:
Q  142 gtgtcggtgtcagacacgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgcttcata 211  Q
    |||||||||||||||||||||| ||||||||| | ||||||| |||||||||||||||||| |||||||||    
T  40258944 gtgtcggtgtcagacacgacacctgtccgacaccaggacacgcctaatccgaggagtgtccatgcttcata 40258874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 137 - 213
Target Start/End: Original strand, 6427518 - 6427595
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcatagg 213  Q
    ||||||||| || ||| ||||||||||||||||||||| |||||||| |||||| || ||||||||||||||||||||    
T  6427518 gtgtcgtgtaggcgtcggacacgacacgtgtccgacaccgggacacgcctaatctgatgagtgtccgtgcttcatagg 6427595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 401 - 468
Target Start/End: Original strand, 9813574 - 9813641
Alignment:
Q  401 cacaagcattaatataattgtaacttttctgcatacctgtcagcatcaaaagagctaaatccacgccc 468  Q
    ||||||||||||| ||| |||||||||||||||||||||  ||||||| ||||||||| |||||||||    
T  9813574 cacaagcattaatctaaatgtaacttttctgcatacctgctagcatcacaagagctaagtccacgccc 9813641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 18337377 - 18337448
Alignment:
Q  142 gtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||||||||| ||||| ||||||||||||||| |||||| | || ||||||||||||||||||||||||||    
T  18337377 gtgtcggtgtcggacacaacacgtgtccgacactgggacatgcctgatccgaggagtgtccgtgcttcatag 18337448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 22515898 - 22515827
Alignment:
Q  142 gtgtcggtgtcagacacgacacgtgtccgacacgg-gacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||||||||| |||||||||| | |||||||| | |||||| |||||||||||||||||||||||||||||    
T  22515898 gtgtcggtgtcggacacgacacatatccgacaccgagacacgcctaatccgaggagtgtccgtgcttcatag 22515827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 140 - 214
Target Start/End: Original strand, 25934673 - 25934748
Alignment:
Q  140 tcgtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcataggt 214  Q
    ||||||||||||| ||||||||||||||| ||||| |||| ||| || |||| |||||||||||||||||||||||    
T  25934673 tcgtgtcggtgtcggacacgacacgtgtctgacacggggatacgccttatccaaggagtgtccgtgcttcataggt 25934748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 32461464 - 32461393
Alignment:
Q  142 gtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||||||||| ||||||||||||||| ||||| |||||||| ||||||| || ||||||||||||||||||    
T  32461464 gtgtcggtgtcggacacgacacgtgtctgacactgggacacgcctaatccaagaagtgtccgtgcttcatag 32461393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 46348394 - 46348323
Alignment:
Q  142 gtgtcggtgtcagacacgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||||||||| |||||||||||||||||||| || |||||| || |||||||| |||||||||||||||||    
T  46348394 gtgtcggtgtcggacacgacacgtgtccgacaccgagacacgcctgatccgaggtgtgtccgtgcttcatag 46348323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 142 - 210
Target Start/End: Complemental strand, 42359460 - 42359391
Alignment:
Q  142 gtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcat 210  Q
    ||||||||||| |||| |||  ||||||||||| |||||||| |||||||||||||||||||||||||||    
T  42359460 gtgtcggtgtcggacaagacgtgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcat 42359391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 142 - 213
Target Start/End: Original strand, 1815305 - 1815377
Alignment:
Q  142 gtgtcggtgtcagacacgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgcttcatagg 213  Q
    ||||||||||| |||||||||| ||||||||| ||||||||| |||||| |||||||| ||||| ||||||||    
T  1815305 gtgtcggtgtccgacacgacacatgtccgacaccgggacacgcctaatctgaggagtgaccgtgattcatagg 1815377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 174 - 214
Target Start/End: Complemental strand, 22881605 - 22881565
Alignment:
Q  174 cgggacacgtctaatccgaggagtgtccgtgcttcataggt 214  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  22881605 cgggacacgtctaatccgaggagtgtccgtgcttcataggt 22881565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 164 - 212
Target Start/End: Complemental strand, 48450598 - 48450550
Alignment:
Q  164 gtgtccgacacgggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  48450598 gtgtcggacacaggacacgtctaatccgaggagtgtccgtgcttcatag 48450550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 217 - 336
Target Start/End: Original strand, 9707157 - 9707276
Alignment:
Q  217 acatagaccacaagaccaagtaaaataaacggaaaatgttgtttgacacgaatagcaacttcgcgaaaaataacaaacttttatgattgctcaacttcat 316  Q
    ||||| |||||| |||||||||| ||||| ||||| ||| ||||| || |||  | ||||||| ||||||  |||||||| |||| ||||||||||| |     
T  9707157 acatacaccacatgaccaagtaatataaaaggaaattgtagtttgtcatgaaatgaaacttcgagaaaaactacaaacttatatggttgctcaactttac 9707256  T
Q  317 ctttatcctcccgtgttttc 336  Q
    ||||||||| | ||||||||    
T  9707257 ctttatcctacagtgttttc 9707276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 113 - 212
Target Start/End: Original strand, 25361910 - 25362012
Alignment:
Q  113 tcacataattcagtgtaattttatgtgtc------gtgtcggtgtcagacacgacacgtgtccgacacgggacacgtctaatccgaggagtgtccgtgct 206  Q
    |||||||||||||||||||| ||||||||      ||||||||||| |||||||||  |||||||||| ||| ||  ||||||||| |||||||||||||    
T  25361910 tcacataattcagtgtaattatatgtgtcagtgtcgtgtcggtgtcggacacgaca--tgtccgacaccgga-acacctaatccgaagagtgtccgtgct 25362006  T
Q  207 tcatag 212  Q
    ||||||    
T  25362007 tcatag 25362012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 116 - 212
Target Start/End: Complemental strand, 19562653 - 19562556
Alignment:
Q  116 cataattcagtgtaattttatgtgtcg-tgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    |||| |||||||||||| ||||||| | |||| ||||| || || ||||||||||||||| |||||||  |||||||||||||||| ||||||||||||    
T  19562653 catagttcagtgtaattatatgtgtaggtgtcagtgtcggatacaacacgtgtccgacacagggacacacctaatccgaggagtgt-cgtgcttcatag 19562556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 137 - 213
Target Start/End: Complemental strand, 31694715 - 31694638
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgacacggga-cacgtctaatccgaggagtgtccgtgcttcatagg 213  Q
    |||||||||||||||| ||||| |||| | | |||||| ||| |||| |||||| |||||||||||||||||||||||    
T  31694715 gtgtcgtgtcggtgtcggacacaacacatattcgacaccggaacacgcctaatctgaggagtgtccgtgcttcatagg 31694638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 142 - 214
Target Start/End: Original strand, 51410073 - 51410146
Alignment:
Q  142 gtgtcggtgtcagacacgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgcttcataggt 214  Q
    ||||||||||| |||||||||||| ||||||| || |||||| ||||||| |||||| | ||||||||||||||    
T  51410073 gtgtcggtgtcggacacgacacgtatccgacaccgagacacgcctaatccaaggagtattcgtgcttcataggt 51410146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 137 - 212
Target Start/End: Original strand, 5944337 - 5944413
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||||||||| || | ||||| |||| |||||||||| |||| ||| |||||||||||||||| ||||||||||||    
T  5944337 gtgtcgtgtcgatgacggacacaacacatgtccgacaccgggatacgcctaatccgaggagtgttcgtgcttcatag 5944413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 415 - 467
Target Start/End: Original strand, 9824076 - 9824128
Alignment:
Q  415 taattgtaacttttctgcatacctgtcagcatcaaaagagctaaatccacgcc 467  Q
    ||||||||||||||||||| |||||| ||||| |||||||||||||| |||||    
T  9824076 taattgtaacttttctgcaaacctgttagcattaaaagagctaaatcgacgcc 9824128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 147 - 210
Target Start/End: Complemental strand, 16297287 - 16297223
Alignment:
Q  147 ggtgtcagacacgacacgtgtccgacacg-ggacacgtctaatccgaggagtgtccgtgcttcat 210  Q
    |||||| ||||||||  |||||||||||  ||||||| |||||||||||||||||||||||||||    
T  16297287 ggtgtcggacacgacgtgtgtccgacaccaggacacgcctaatccgaggagtgtccgtgcttcat 16297223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 143 - 217
Target Start/End: Complemental strand, 2896131 - 2896056
Alignment:
Q  143 tgtcggtgtcagacacgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgcttcataggtata 217  Q
    |||||||||||||||||||| |||||||| | ||||||||  ||||||| || ||||||| || ||||||||||||    
T  2896131 tgtcggtgtcagacacgacatgtgtccgagaccgggacacacctaatccaagaagtgtccatgtttcataggtata 2896056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 137 - 207
Target Start/End: Complemental strand, 9629905 - 9629834
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgctt 207  Q
    ||||||||||| |||| |||||||||| ||||||||| ||||||||||||  ||| || |||||||||||||    
T  9629905 gtgtcgtgtcgatgtcggacacgacacatgtccgacaccgggacacgtctcgtccaagaagtgtccgtgctt 9629834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 18190119 - 18190048
Alignment:
Q  142 gtgtcggtgtcagacacgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    |||||| |||||||||| |||||||||||||| ||||||||  ||||||||||||||||  | |||||||||    
T  18190119 gtgtcgatgtcagacacaacacgtgtccgacaccgggacacacctaatccgaggagtgtatgcgcttcatag 18190048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 177 - 215
Target Start/End: Complemental strand, 21366027 - 21365989
Alignment:
Q  177 gacacgtctaatccgaggagtgtccgtgcttcataggta 215  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  21366027 gacacgcctaatccgaggagtgtccgtgcttcataggta 21365989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 176 - 214
Target Start/End: Original strand, 22947813 - 22947851
Alignment:
Q  176 ggacacgtctaatccgaggagtgtccgtgcttcataggt 214  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  22947813 ggacacgcctaatccgaggagtgtccgtgcttcataggt 22947851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 143 - 212
Target Start/End: Complemental strand, 27966010 - 27965940
Alignment:
Q  143 tgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    |||| |||||||||||| | |||| | ||||| |||||||| |||||||||||||||||| ||||||||||    
T  27966010 tgtccgtgtcagacacgcctcgtgcctgacaccgggacacgcctaatccgaggagtgtccatgcttcatag 27965940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 159 - 212
Target Start/End: Complemental strand, 34712377 - 34712323
Alignment:
Q  159 gacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||||||||| |||| |||||||||||||| | |||||||||||||||||||||    
T  34712377 gacacgtgtcctacactgggacacgtctaattcaaggagtgtccgtgcttcatag 34712323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 212
Target Start/End: Original strand, 36878485 - 36878585
Alignment:
Q  113 tcacataattcagtgtaattttatgtgtcgtgtcggtgtcagacacgacacgtgtccgacacg------ggacacgtctaatccgaggagtgtccgtgct 206  Q
    |||||||||||||||||||| || ||||||     ||||| ||||||| || |||||||||||      ||||||| ||||||| |||||||||||||||    
T  36878485 tcacataattcagtgtaattataggtgtcg-----gtgtctgacacgaaacatgtccgacacgacacggggacacgcctaatcccaggagtgtccgtgct 36878579  T
Q  207 tcatag 212  Q
    ||||||    
T  36878580 tcatag 36878585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 198
Target Start/End: Original strand, 40181895 - 40181976
Alignment:
Q  113 tcacataattcagtgtaattttatgtgtcgtgtcggtgtcagacacgacacgtgtccgaca-cgggacacgtctaatccgaggagtg 198  Q
    |||||||||||||||||||| |||     || |||||||| ||||| |||||||||| ||| ||||||||| |||||||||||||||    
T  40181895 tcacataattcagtgtaattatat-----gtatcggtgtcggacacaacacgtgtcctacaccgggacacgcctaatccgaggagtg 40181976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 115 - 212
Target Start/End: Complemental strand, 42004980 - 42004882
Alignment:
Q  115 acataattcagtgtaattttatgtgtcgtgtcggtgtcagacac-gacacgtgtccgacacgggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    |||||||| ||||||||  || |||| ||||||||||| ||||| ||| | ||||||||||   ||||| ||||| ||| |||||||||||||||||||    
T  42004980 acataatttagtgtaatcataggtgttgtgtcggtgtcggacaccgacgcatgtccgacactaaacacgcctaattcgaagagtgtccgtgcttcatag 42004882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 142 - 210
Target Start/End: Complemental strand, 29163392 - 29163323
Alignment:
Q  142 gtgtcggtgtcagacacgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgcttcat 210  Q
    ||||||||||| ||||||||||||| | |||| ||||||||| |||||| ||| ||||| ||||||||||    
T  29163392 gtgtcggtgtcggacacgacacgtgcctgacaccgggacacggctaatcagagaagtgttcgtgcttcat 29163323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 35702579 - 35702542
Alignment:
Q  175 gggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    |||||||| |||||||||||||||||||||||||||||    
T  35702579 gggacacgcctaatccgaggagtgtccgtgcttcatag 35702542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 158 - 211
Target Start/End: Complemental strand, 48415720 - 48415667
Alignment:
Q  158 cgacacgtgtccgacacgggacacgtctaatccgaggagtgtccgtgcttcata 211  Q
    ||||||||||  ||||| ||||||| ||||||| ||||||||||||||||||||    
T  48415720 cgacacgtgttggacacaggacacgcctaatccaaggagtgtccgtgcttcata 48415667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 148 - 207
Target Start/End: Original strand, 26830641 - 26830701
Alignment:
Q  148 gtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgctt 207  Q
    ||||||||||| |||||||| ||| || |||||||| |||||| |||||||||||||||||    
T  26830641 gtgtcagacactacacgtgttcgataccgggacacgcctaatcagaggagtgtccgtgctt 26830701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 115 - 213
Target Start/End: Complemental strand, 40747806 - 40747706
Alignment:
Q  115 acataattcagtgtaattttatgtgtcgtgtcggtgtcagacac-gacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    |||||||||| ||||||| || ||||| ||| |||||| ||||| ||  | ||||| |||| |||||||  ||||||||||||| |||||||||||||||    
T  40747806 acataattcaatgtaattataggtgtcatgttggtgtcggacaccgatccatgtcccacacagggacacccctaatccgaggagcgtccgtgcttcatag 40747707  T
Q  213 g 213  Q
    |    
T  40747706 g 40747706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 211
Target Start/End: Complemental strand, 6414995 - 6414932
Alignment:
Q  149 tgtcagacacgacacgtgtccgacacgg-gacacgtctaatccgaggagtgtccgtgcttcata 211  Q
    |||| ||||||||||||||| ||||| | ||||| | | |||||||||||||||||||||||||    
T  6414995 tgtcggacacgacacgtgtctgacaccgcgacacatttcatccgaggagtgtccgtgcttcata 6414932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 175 - 214
Target Start/End: Original strand, 15765840 - 15765879
Alignment:
Q  175 gggacacgtctaatccgaggagtgtccgtgcttcataggt 214  Q
    |||||||| ||||||||| |||||||||||||||||||||    
T  15765840 gggacacgcctaatccgaagagtgtccgtgcttcataggt 15765879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 113 - 148
Target Start/End: Complemental strand, 17705621 - 17705586
Alignment:
Q  113 tcacataattcagtgtaattttatgtgtcgtgtcgg 148  Q
    |||||||||||||||||||| |||||||||||||||    
T  17705621 tcacataattcagtgtaattatatgtgtcgtgtcgg 17705586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 113 - 213
Target Start/End: Complemental strand, 20157385 - 20157283
Alignment:
Q  113 tcacataattcagtgtaattttatgtgtc-gtgtcggtgtcagaca-cgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgcttca 209  Q
    |||||||||||||||||||  |||||||| ||||| ||||| |||| |||| ||||||||||| || |||||  |||||  ||||||| |||||||||||    
T  20157385 tcacataattcagtgtaatcatatgtgtcggtgtc-gtgtccgacaccgacgcgtgtccgacaccgagacacacctaatttgaggagtatccgtgcttca 20157287  T
Q  210 tagg 213  Q
    ||||    
T  20157286 tagg 20157283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 214
Target Start/End: Complemental strand, 29144369 - 29144318
Alignment:
Q  164 gtgtccgacacggga-cacgtctaatccgaggagtgtccgtgcttcataggt 214  Q
    ||||||||||| ||| |||| ||||||||| |||||||||||||||||||||    
T  29144369 gtgtccgacaccggaacacgcctaatccgaagagtgtccgtgcttcataggt 29144318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 38078672 - 38078601
Alignment:
Q  142 gtgtcggtgtcagacacgacacgtgtccgacacg-ggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||||||||| |||||||||| ||| | ||||  ||||||| |||||||||||||| | ||||||||||||    
T  38078672 gtgtcggtgtcggacacgacacatgttcaacaccaggacacgcctaatccgaggagtattcgtgcttcatag 38078601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 213
Target Start/End: Complemental strand, 46940798 - 46940747
Alignment:
Q  163 cgtgtccgacacggga-cacgtctaatccgaggagtgtccgtgcttcatagg 213  Q
    |||||||||||| ||| |||| |||||||||||||||| |||||||||||||    
T  46940798 cgtgtccgacaccggaacacgcctaatccgaggagtgttcgtgcttcatagg 46940747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 163 - 212
Target Start/End: Original strand, 2218297 - 2218347
Alignment:
Q  163 cgtgtccgacacg-ggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||||||||||  ||||||| |||||| ||||||||||||||||||||||    
T  2218297 cgtgtccgacactaggacacgcctaatctgaggagtgtccgtgcttcatag 2218347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 211
Target Start/End: Complemental strand, 10577734 - 10577676
Alignment:
Q  154 gacacgacacgtgtccgacacggg-acacgtctaatccgaggagtgtccgtgcttcata 211  Q
    |||||||| |||||| |||||||| ||||| || |||| ||||||||||||||||||||    
T  10577734 gacacgacgcgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 10577676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 211
Target Start/End: Original strand, 12919005 - 12919063
Alignment:
Q  154 gacacgacacgtgtccgacacggg-acacgtctaatccgaggagtgtccgtgcttcata 211  Q
    ||||||||||||||| |||||||| ||||| || ||||||| ||||| |||||||||||    
T  12919005 gacacgacacgtgtctgacacggggacacggcttatccgagaagtgttcgtgcttcata 12919063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 212
Target Start/End: Original strand, 16812637 - 16812675
Alignment:
Q  174 cgggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||||||| |||||| ||||||||||||||||||||||    
T  16812637 cgggacacgcctaatctgaggagtgtccgtgcttcatag 16812675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 212
Target Start/End: Complemental strand, 17831566 - 17831462
Alignment:
Q  113 tcacataattcagtgtaattttatgt---gtcgtgtcggtgtcagaca-cgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgctt 207  Q
    |||||| ||||||||||||  |||||   |||||||| ||||| |||| ||||| |||||||||| ||||||||| ||||||  |||||||||| || ||    
T  17831566 tcacattattcagtgtaatcatatgtgtcgtcgtgtcagtgtcggacaccgacatgtgtccgacaccgggacacgcctaatcttaggagtgtccatgttt 17831467  T
Q  208 catag 212  Q
    |||||    
T  17831466 catag 17831462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 173 - 215
Target Start/End: Original strand, 30359445 - 30359487
Alignment:
Q  173 acgggacacgtctaatccgaggagtgtccgtgcttcataggta 215  Q
    |||||||||| | |||| |||||||||||||||||||||||||    
T  30359445 acgggacacgccaaatctgaggagtgtccgtgcttcataggta 30359487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 148 - 213
Target Start/End: Original strand, 31015091 - 31015157
Alignment:
Q  148 gtgtcagacacgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgcttcatagg 213  Q
    ||||| ||||||||||||||| |||| ||||||||| ||||||| |||||  || ||||||||||||    
T  31015091 gtgtcggacacgacacgtgtctgacatcgggacacgcctaatccaaggaggatcagtgcttcatagg 31015157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 50 - 88
Target Start/End: Complemental strand, 35919382 - 35919344
Alignment:
Q  50 gaagcagagatacggacactgacacacggacaccgacac 88  Q
    |||||| ||||||||||||||||||||||||||| ||||    
T  35919382 gaagcacagatacggacactgacacacggacaccaacac 35919344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 184 - 213
Target Start/End: Complemental strand, 7918182 - 7918153
Alignment:
Q  184 ctaatccgaggagtgtccgtgcttcatagg 213  Q
    ||||||||||||||||||||||||||||||    
T  7918182 ctaatccgaggagtgtccgtgcttcatagg 7918153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 215
Target Start/End: Complemental strand, 9690267 - 9690210
Alignment:
Q  159 gacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcataggta 215  Q
    |||||||||||||||| |||||||| ||||||||  ||||||  ||||||||||||||    
T  9690267 gacacgtgtccgacaccgggacacgcctaatccggagagtgtttgtgcttcataggta 9690210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 158 - 210
Target Start/End: Original strand, 17778617 - 17778670
Alignment:
Q  158 cgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgcttcat 210  Q
    |||||||||||||||| ||||||| | |||||||||| ||||| ||||||||||    
T  17778617 cgacacgtgtccgacaccgggacatgcctaatccgagaagtgttcgtgcttcat 17778670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 137 - 200
Target Start/End: Complemental strand, 6612176 - 6612112
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtc 200  Q
    ||||||||||| |||| ||||||| | |||||||||| | ||||||| ||||||| |||||||||    
T  6612176 gtgtcgtgtcgatgtcggacacgatatgtgtccgacaccaggacacgcctaatccaaggagtgtc 6612112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 176 - 212
Target Start/End: Complemental strand, 9630597 - 9630561
Alignment:
Q  176 ggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||||| |||||||||||||||| ||||||||||||    
T  9630597 ggacacgcctaatccgaggagtgttcgtgcttcatag 9630561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 155 - 214
Target Start/End: Original strand, 18471356 - 18471416
Alignment:
Q  155 acacgacacgtgtccgacacggga-cacgtctaatccgaggagtgtccgtgcttcataggt 214  Q
    |||||||||||||||||||| | | |||  ||||| |||||||||||||| ||||||||||    
T  18471356 acacgacacgtgtccgacaccgaaacacacctaattcgaggagtgtccgtacttcataggt 18471416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 137 - 212
Target Start/End: Complemental strand, 41597486 - 41597410
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    |||| ||||| ||||| ||||||||||||||| ||||| |||| |||  | |||| ||||||||| |||||||||||    
T  41597486 gtgttgtgtccgtgtcggacacgacacgtgtctgacacggggatacgctttatccaaggagtgtctgtgcttcatag 41597410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 142 - 213
Target Start/End: Complemental strand, 43492505 - 43492433
Alignment:
Q  142 gtgtcggtgtcagacacgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgcttcatagg 213  Q
    ||||||||||||||||| |||| ||||||||| ||| ||||| ||||||||| |||  |  ||||||||||||    
T  43492505 gtgtcggtgtcagacacaacacatgtccgacaccggcacacgcctaatccgaagagcatatgtgcttcatagg 43492433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 61; Significance: 6e-26; HSPs: 58)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 137 - 212
Target Start/End: Original strand, 22652030 - 22652106
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    |||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  22652030 gtgtcgtgtcggtgtcggacacgacatgtgtccgacaccgggacacgtctaatccgaggagtgtccgtgcttcatag 22652106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 137 - 212
Target Start/End: Original strand, 29447498 - 29447574
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    |||||||||||||||||||||||||| |||||||||| ||||||| |||||||| ||||||||||||||||||||||    
T  29447498 gtgtcgtgtcggtgtcagacacgacatgtgtccgacaccgggacaggtctaatcggaggagtgtccgtgcttcatag 29447574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 137 - 214
Target Start/End: Complemental strand, 29510309 - 29510231
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcataggt 214  Q
    |||| ||||||||||| |||||||| |||||||||||| |||||||  |||||||||||||||||||||||||||||||    
T  29510309 gtgtagtgtcggtgtcggacacgacgcgtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcataggt 29510231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 137 - 212
Target Start/End: Complemental strand, 34451037 - 34450961
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    |||||||||||||||| ||||||||||||||| ||||| |||||||| || |||| |||||||||||||||||||||    
T  34451037 gtgtcgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 34450961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 3951547 - 3951476
Alignment:
Q  142 gtgtcggtgtcagacacgacacgtgtccgacacggg-acacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||||||||||||||||||||||||| |||||||| ||||| ||||||| |||||| ||||||||||||||    
T  3951547 gtgtcggtgtcagacacgacacgtgtctgacacgggaacacgcctaatccaaggagtttccgtgcttcatag 3951476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 137 - 212
Target Start/End: Complemental strand, 27067305 - 27067231
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgacacgggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    |||||||||||||||| ||||||||| |||||  |||| ||| |||||||||||||||||||||||||||||||||    
T  27067305 gtgtcgtgtcggtgtcggacacgacatgtgtcgaacaccgga-acgtctaatccgaggagtgtccgtgcttcatag 27067231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 142 - 214
Target Start/End: Original strand, 5813640 - 5813713
Alignment:
Q  142 gtgtcggtgtcagacacgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgcttcataggt 214  Q
    ||||||||||| |||||||||||||||||||| ||||||||| |||||  |||||||||||||||||| |||||    
T  5813640 gtgtcggtgtcggacacgacacgtgtccgacaccgggacacgcctaattggaggagtgtccgtgcttcgtaggt 5813713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 137 - 212
Target Start/End: Complemental strand, 15816134 - 15816058
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||||||| |||||| |||||||||||  |||||||| |||||||| |||||||||| ||||||||||||||||||    
T  15816134 gtgtcgtgttggtgtcggacacgacacgaatccgacaccgggacacgcctaatccgagaagtgtccgtgcttcatag 15816058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 113 - 212
Target Start/End: Complemental strand, 41831975 - 41831875
Alignment:
Q  113 tcacataattcagtgtaattttatgtgtcgtgtcggtgtcagacacgacacgtgtccgac-acgggacacgtctaatccgaggagtgtccgtgcttcata 211  Q
    |||||||||||||||||| |  | ||||||||| |||||| ||||||| |||| |||||| || ||||||||||||| |||||||||||| | |||||||    
T  41831975 tcacataattcagtgtaactacaagtgtcgtgttggtgtcggacacgatacgtatccgacaacaggacacgtctaattcgaggagtgtccattcttcata 41831876  T
Q  212 g 212  Q
    |    
T  41831875 g 41831875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 113 - 212
Target Start/End: Original strand, 11803283 - 11803389
Alignment:
Q  113 tcacataattcagtgtaattttatgtgtcg------tgtcggtgtcagacacgacacgtgtccgacacggg-acacgtctaatccgaggagtgtccgtgc 205  Q
    |||||||||||||||||||| ||||||| |      ||| |||||  || ||||||| |||||||||| || ||||||||||||||||||||||||||||    
T  11803283 tcacataattcagtgtaattatatgtgttggtgttgtgttggtgttggatacgacacatgtccgacacaggtacacgtctaatccgaggagtgtccgtgc 11803382  T
Q  206 ttcatag 212  Q
    |||||||    
T  11803383 ttcatag 11803389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 113 - 210
Target Start/End: Original strand, 3025575 - 3025668
Alignment:
Q  113 tcacataattcagtgtaattttatgtgtcgtgtcggtgtcagacacgacacgtgtccgacacgg-gacacgtctaatccgaggagtgtccgtgcttcat 210  Q
    |||||||||||||||||||| || |||||      ||||| ||||||||||||||| ||||| | |||||| |||||||||||||||||||||||||||    
T  3025575 tcacataattcagtgtaattataggtgtca-----gtgtcggacacgacacgtgtctgacactgtgacacggctaatccgaggagtgtccgtgcttcat 3025668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 148 - 213
Target Start/End: Original strand, 8343381 - 8343447
Alignment:
Q  148 gtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcatagg 213  Q
    ||||| ||||||||||||||||||||| |||||||| ||||||||| ||||||| ||||||||||||    
T  8343381 gtgtccgacacgacacgtgtccgacaccgggacacgcctaatccgaagagtgtctgtgcttcatagg 8343447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 113 - 212
Target Start/End: Complemental strand, 26902210 - 26902104
Alignment:
Q  113 tcacataattcagtgtaattttatgtgtcg-tgtcg-----gtgtcagacacgacacgtgtccgacacggg-acacgtctaatccgaggagtgtccgtgc 205  Q
    |||||||||||||||||||| ||||||||| |||||     ||||| ||||||||||||||| | |||||| ||||| || ||| |||||||||||||||    
T  26902210 tcacataattcagtgtaattatatgtgtcggtgtcgtatgagtgtcggacacgacacgtgtctggcacggggacacgccttatctgaggagtgtccgtgc 26902111  T
Q  206 ttcatag 212  Q
    |||||||    
T  26902110 ttcatag 26902104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 158 - 212
Target Start/End: Original strand, 39820493 - 39820547
Alignment:
Q  158 cgacacgtgtccgacacgggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    |||| |||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  39820493 cgacgcgtgtccgacacgggacacgcctaatccgagaagtgtccgtgcttcatag 39820547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 113 - 212
Target Start/End: Original strand, 14134723 - 14134818
Alignment:
Q  113 tcacataattcagtgtaattttatgtgtcgtgtcggtgtcagacacgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgcttcata 211  Q
    |||||||||||||||||||| |||      ||||||||||| |||||||||||||||| || | ||||||| ||||| ||||||||||||||| ||||||    
T  14134723 tcacataattcagtgtaattatat-----atgtcggtgtcaaacacgacacgtgtccgtcaccaggacacgcctaattcgaggagtgtccgtgtttcata 14134817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 137 - 212
Target Start/End: Original strand, 21465466 - 21465542
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    |||||||||| ||||| |||||||||||||||| |||| |||| ||| |||||  ||||||||||||||||||||||    
T  21465466 gtgtcgtgtcagtgtcggacacgacacgtgtccaacacagggatacgcctaatttgaggagtgtccgtgcttcatag 21465542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 113 - 212
Target Start/End: Complemental strand, 11927121 - 11927015
Alignment:
Q  113 tcacataattcagtgtaattttatgtgtcg------tgtcggtgtcagacacgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgc 205  Q
    |||||||||||||||||||| |||||||||      ||| ||||||| |||||||| || ||| ||| || |||||| ||||||||| ||||||||||||    
T  11927121 tcacataattcagtgtaattatatgtgtcggtgtcgtgttggtgtcatacacgacatgtatccaacatcgagacacgcctaatccgatgagtgtccgtgc 11927022  T
Q  206 ttcatag 212  Q
    |||||||    
T  11927021 ttcatag 11927015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 24413570 - 24413499
Alignment:
Q  142 gtgtcggtgtcagacacgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||| ||||| |||||||  ||||||| ||| |||||||||||||||||||| ||||||||||||||||||    
T  24413570 gtgtcagtgtcggacacgatgcgtgtccaacagcgggacacgtctaatccgagaagtgtccgtgcttcatag 24413499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 138 - 212
Target Start/End: Original strand, 28745553 - 28745628
Alignment:
Q  138 tgtcgtgtcggtgtcagacacgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||||||||||||| |||||||||| |||||| || || |||| ||||||| | |||||||||||||||||||||    
T  28745553 tgtcgtgtcggtgtcggacacgacacctgtccgtcaccgagacaagtctaattcaaggagtgtccgtgcttcatag 28745628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 137 - 211
Target Start/End: Complemental strand, 29447115 - 29447040
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgacacg-ggacacgtctaatccgaggagtgtccgtgcttcata 211  Q
    ||||| |||||||||| ||||||||| ||||| |||||  ||||||| ||||||| ||||||||||||||||||||    
T  29447115 gtgtcatgtcggtgtcggacacgacatgtgtctgacaccaggacacgcctaatcctaggagtgtccgtgcttcata 29447040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 36450765 - 36450694
Alignment:
Q  142 gtgtcggtgtcagacacgacacgtgtccgacacg-ggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    |||| |||||| |||||||| ||||||||||||  ||||||| ||||||||||||||||| |||||||||||    
T  36450765 gtgtaggtgtcggacacgacgcgtgtccgacaccaggacacgcctaatccgaggagtgtctgtgcttcatag 36450694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 142 - 196
Target Start/End: Complemental strand, 44462206 - 44462151
Alignment:
Q  142 gtgtcggtgtcagacacgacacgtgtccgaca-cgggacacgtctaatccgaggag 196  Q
    ||||||||||||||||||| || ||||||||| |||||||||||||||||||||||    
T  44462206 gtgtcggtgtcagacacgatacatgtccgacaccgggacacgtctaatccgaggag 44462151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 142 - 196
Target Start/End: Complemental strand, 44469739 - 44469684
Alignment:
Q  142 gtgtcggtgtcagacacgacacgtgtccgaca-cgggacacgtctaatccgaggag 196  Q
    ||||||||||||||||||| || ||||||||| |||||||||||||||||||||||    
T  44469739 gtgtcggtgtcagacacgatacatgtccgacaccgggacacgtctaatccgaggag 44469684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 13009493 - 13009423
Alignment:
Q  142 gtgtcggtgtcagacac-gacacgtgtccgacacgggacacgtctaatccgaggagtgtccgtgcttcata 211  Q
    |||| |||||||||||| ||| | |||||||||||||||||| ||||||| ||||| ||||||||||||||    
T  13009493 gtgtaggtgtcagacaccgacgcctgtccgacacgggacacgcctaatccaaggagcgtccgtgcttcata 13009423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 37283823 - 37283755
Alignment:
Q  142 gtgtcggtgtcagacacgacacgtgtccgacacgggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||||||||  |||||||||||||||  || ||||||||||||||||||||||||| |||||||||||||    
T  37283823 gtgtcggtgtgggacacgacacgtgtct-ac-cgggacacgtctaatccgaggagtgcccgtgcttcatag 37283755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 142 - 210
Target Start/End: Complemental strand, 926799 - 926730
Alignment:
Q  142 gtgtcggtgtcagacacgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgcttcat 210  Q
    ||||||||||| ||| |||||||||||||||| ||||||| |  | ||||||||||||||||||||||||    
T  926799 gtgtcggtgtcggacgcgacacgtgtccgacaccgggacatgctttatccgaggagtgtccgtgcttcat 926730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 142 - 210
Target Start/End: Complemental strand, 20679406 - 20679337
Alignment:
Q  142 gtgtcggtgtcagacacgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgcttcat 210  Q
    ||||||||||||||| | |||||||||||||| ||||||||| || | ||||||||||||| ||||||||    
T  20679406 gtgtcggtgtcagacgcaacacgtgtccgacaccgggacacgccttaaccgaggagtgtccatgcttcat 20679337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 142 - 214
Target Start/End: Original strand, 40332239 - 40332312
Alignment:
Q  142 gtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcataggt 214  Q
    ||||||||||  |||||||||||||||| |||| ||||| || ||||||||||||||||||||| |||| ||||    
T  40332239 gtgtcggtgtgggacacgacacgtgtcccacaccgggacgcgcctaatccgaggagtgtccgtgtttcacaggt 40332312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 142 - 213
Target Start/End: Complemental strand, 4298897 - 4298829
Alignment:
Q  142 gtgtcggtgtcagacacgacacgtgtccgacacgggacacgtctaatccgaggagtgtccgtgcttcatagg 213  Q
    ||||||||||||||   ||||||||| |||||||||||||| |||||| ||||||||| |||||||||||||    
T  4298897 gtgtcggtgtcagat--gacacgtgttcgacacgggacacgcctaatctgaggagtgt-cgtgcttcatagg 4298829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 114 - 212
Target Start/End: Complemental strand, 12570542 - 12570438
Alignment:
Q  114 cacataattcagtgtaattttatgtgtcg-----tgtcggtgtcagacacgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgctt 207  Q
    ||||||||| ||||||||| |||||||||     | |||||||||||||| |||||||||||||| | ||||||| |||||| || || |||||||||||    
T  12570542 cacataattaagtgtaattatatgtgtcgatgtgtatcggtgtcagacactacacgtgtccgacaccaggacacgcctaatctgaagattgtccgtgctt 12570443  T
Q  208 catag 212  Q
     ||||    
T  12570442 tatag 12570438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 142 - 204
Target Start/End: Complemental strand, 126358 - 126295
Alignment:
Q  142 gtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtg 204  Q
    ||||| ||||| |||||||||||||||| | || |||||||| |||||||||||||||||||||    
T  126358 gtgtcagtgtcggacacgacacgtgtccaataccgggacacggctaatccgaggagtgtccgtg 126295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 148 - 214
Target Start/End: Complemental strand, 22197736 - 22197669
Alignment:
Q  148 gtgtcagacacgacacgtgtccgacacggga-cacgtctaatccgaggagtgtccgtgcttcataggt 214  Q
    ||||| |||| |||||||||||||||| ||| |||| |||||| ||||||||||||||||| ||||||    
T  22197736 gtgtcggacatgacacgtgtccgacaccggatcacgcctaatctgaggagtgtccgtgctttataggt 22197669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 154 - 200
Target Start/End: Complemental strand, 22943348 - 22943301
Alignment:
Q  154 gacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtc 200  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||    
T  22943348 gacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtc 22943301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 43737822 - 43737752
Alignment:
Q  142 gtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcata 211  Q
    ||||||||||| ||||||||| ||||| ||||| |||| ||| || |||| ||||||||||||||||||||    
T  43737822 gtgtcggtgtcggacacgacaggtgtctgacacggggatacgccttatccaaggagtgtccgtgcttcata 43737752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 154 - 214
Target Start/End: Original strand, 18407779 - 18407840
Alignment:
Q  154 gacacgacacgtgtccgacacg-ggacacgtctaatccgaggagtgtccgtgcttcataggt 214  Q
    |||||||||| ||||||||||  ||||||| |||||  ||||||||||||||||||||||||    
T  18407779 gacacgacacatgtccgacactaggacacgcctaattggaggagtgtccgtgcttcataggt 18407840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 164 - 212
Target Start/End: Original strand, 40064032 - 40064081
Alignment:
Q  164 gtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||||||||| ||||||| |||||||||||||||||||||||| |||||    
T  40064032 gtgtccgacaccgggacacatctaatccgaggagtgtccgtgctacatag 40064081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 137 - 212
Target Start/End: Original strand, 11944719 - 11944795
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgacacgg-gacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||||||| | ||||| |||||||| || |||||||| | |||||| ||||||||| |||||| ||||||||||||    
T  11944719 gtgtcgtgttgatgtcatacacgacatgtatccgacaccgagacacgcctaatccgatgagtgttcgtgcttcatag 11944795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 145 - 212
Target Start/End: Complemental strand, 12570732 - 12570664
Alignment:
Q  145 tcggtgtcagacacgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    |||||||||||||| |||||||||||||| | ||||||| |||||| || || ||||||||||| ||||    
T  12570732 tcggtgtcagacactacacgtgtccgacaccaggacacgcctaatctgaagattgtccgtgctttatag 12570664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 114 - 212
Target Start/End: Complemental strand, 16642008 - 16641909
Alignment:
Q  114 cacataattcagtgtaattttatgtgtcg-tgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcata 211  Q
    ||||||||| |||||  || ||||||||| ||||| |||| ||||||||| |||||  |||| |||||||  ||||||||||||||||| ||||||||||    
T  16642008 cacataatttagtgtcgttatatgtgtcggtgtcg-tgtcggacacgacatgtgtctaacaccgggacacacctaatccgaggagtgtctgtgcttcata 16641910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 174 - 214
Target Start/End: Original strand, 27213606 - 27213646
Alignment:
Q  174 cgggacacgtctaatccgaggagtgtccgtgcttcataggt 214  Q
    ||||||||| |||||||||| ||||||||||||||||||||    
T  27213606 cgggacacggctaatccgagaagtgtccgtgcttcataggt 27213646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 145 - 212
Target Start/End: Original strand, 31557047 - 31557115
Alignment:
Q  145 tcggtgtcagacacgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||||||||||||||||| ||||||||| | ||||||| ||||||| ||| |||||| ||| ||||||    
T  31557047 tcggtgtcagacacgacacatgtccgacaccaggacacgcctaatccaaggtgtgtccatgcctcatag 31557115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 158 - 208
Target Start/End: Complemental strand, 12559095 - 12559044
Alignment:
Q  158 cgacacgtgtccgac-acgggacacgtctaatccgaggagtgtccgtgcttc 208  Q
    ||||||||||||||| ||||||||| |||||||| ||||||||| |||||||    
T  12559095 cgacacgtgtccgacaacgggacacatctaatcccaggagtgtctgtgcttc 12559044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 212
Target Start/End: Original strand, 31514938 - 31514973
Alignment:
Q  177 gacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    |||||| |||||||||||||||||||||||||||||    
T  31514938 gacacgcctaatccgaggagtgtccgtgcttcatag 31514973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 33405395 - 33405324
Alignment:
Q  142 gtgtcggtgtcagacacgacacgtgtccgacacg-ggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||||||||| |||||||||| |||| |||||  ||||||| ||||||| | ||||||||||||| |||||    
T  33405395 gtgtcggtgtcggacacgacacatgtctgacacctggacacggctaatccaatgagtgtccgtgctccatag 33405324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 164 - 213
Target Start/End: Original strand, 8343037 - 8343087
Alignment:
Q  164 gtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcatagg 213  Q
    ||||||||||| |||||||| ||||||||| ||||||| ||||||||||||    
T  8343037 gtgtccgacaccgggacacgcctaatccgaagagtgtctgtgcttcatagg 8343087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 212
Target Start/End: Original strand, 17751737 - 17751775
Alignment:
Q  174 cgggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||||||| ||||||||||||||||||| |||||||||    
T  17751737 cgggacacgcctaatccgaggagtgtccgcgcttcatag 17751775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 212
Target Start/End: Original strand, 17760724 - 17760762
Alignment:
Q  174 cgggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||||||| ||||||||||||||||||| |||||||||    
T  17760724 cgggacacgcctaatccgaggagtgtccgcgcttcatag 17760762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 212
Target Start/End: Original strand, 25566911 - 25566949
Alignment:
Q  174 cgggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||||||| ||||||||||||||||| |||||||||||    
T  25566911 cgggacacgcctaatccgaggagtgtctgtgcttcatag 25566949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 164 - 213
Target Start/End: Complemental strand, 30068017 - 30067967
Alignment:
Q  164 gtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcatagg 213  Q
    ||||||||||| |||||||  ||||||||| ||||||||||||||||||||    
T  30068017 gtgtccgacactgggacacacctaatccgatgagtgtccgtgcttcatagg 30067967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 115 - 210
Target Start/End: Original strand, 44067542 - 44067644
Alignment:
Q  115 acataattcagtgtaattttatgtgtcgtgtcggtgtca-----gacac-gacacgtgtccgacacg-ggacacgtctaatccgaggagtgtccgtgctt 207  Q
    ||||||| |||||||||| || ||||||||||||||||      ||||| ||  ||||||||||||  ||||||| ||||| ||||||||||||||||||    
T  44067542 acataatacagtgtaattataagtgtcgtgtcggtgtcgtgtcggacactgatgcgtgtccgacaccaggacacgcctaattcgaggagtgtccgtgctt 44067641  T
Q  208 cat 210  Q
    |||    
T  44067642 cat 44067644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 140 - 212
Target Start/End: Complemental strand, 6065659 - 6065586
Alignment:
Q  140 tcgtgtcggtgtcagacacgacacgtgtccgacacggga-cacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    |||||||  |||| |||||||||| |||||||||| ||| ||||  |||| | |||||||||||||||||||||    
T  6065659 tcgtgtcaatgtcggacacgacacatgtccgacaccggaacacgcataattcaaggagtgtccgtgcttcatag 6065586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 176 - 209
Target Start/End: Original strand, 13203700 - 13203733
Alignment:
Q  176 ggacacgtctaatccgaggagtgtccgtgcttca 209  Q
    |||||| |||||||||||||||||||||||||||    
T  13203700 ggacacatctaatccgaggagtgtccgtgcttca 13203733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 142 - 210
Target Start/End: Complemental strand, 15023268 - 15023199
Alignment:
Q  142 gtgtcggtgtcagacacgacacgtgtccgacacggga-cacgtctaatccgaggagtgtccgtgcttcat 210  Q
    |||||| |||| || |||||||||||||||  | ||| ||||||||||||||||||||||| || |||||    
T  15023268 gtgtcgatgtcggatacgacacgtgtccgatgctggaacacgtctaatccgaggagtgtccatgattcat 15023199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 212
Target Start/End: Original strand, 18964232 - 18964309
Alignment:
Q  136 tgtgtcgtgtcggtgtcagacacgacacgtgtccgacacgg-gacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||||||||||| ||   ||||||||| ||||  |||||| |||||| || |||||||||||||| |||||||||||    
T  18964232 tgtgtcgtgtcggcgttgaacacgacacctgtctaacacggagacacgccttatccgaggagtgtctgtgcttcatag 18964309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 140 - 211
Target Start/End: Original strand, 2035795 - 2035866
Alignment:
Q  140 tcgtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcata 211  Q
    ||||| ||||||||||| |||| |||||||||||| |||| ||  |||||||||| || ||||||||||||||    
T  2035795 tcgtgccggtgtcagac-cgacgcgtgtccgacaccgggagacacctaatccgagtagcgtccgtgcttcata 2035866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 149 - 208
Target Start/End: Complemental strand, 4122242 - 4122182
Alignment:
Q  149 tgtcagacacgacacgtgtccgacacggga-cacgtctaatccgaggagtgtccgtgcttc 208  Q
    ||||| |||||||||||||  ||||| ||| |||||||||||| | |||||||||||||||    
T  4122242 tgtcaaacacgacacgtgttggacaccggaacacgtctaatccaaagagtgtccgtgcttc 4122182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 16987994 - 16988030
Alignment:
Q  174 cgggacacgtctaatccgaggagtgtccgtgcttcat 210  Q
    ||||||||  |||||||||||||||||||||||||||    
T  16987994 cgggacacccctaatccgaggagtgtccgtgcttcat 16988030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 175 - 207
Target Start/End: Complemental strand, 31109495 - 31109463
Alignment:
Q  175 gggacacgtctaatccgaggagtgtccgtgctt 207  Q
    |||||||| ||||||||||||||||||||||||    
T  31109495 gggacacgcctaatccgaggagtgtccgtgctt 31109463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 59; Significance: 9e-25; HSPs: 54)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 142 - 216
Target Start/End: Original strand, 4877991 - 4878065
Alignment:
Q  142 gtgtcggtgtcagacacgacacgtgtccgacacgggacacgtctaatccgaggagtgtccgtgcttcataggtat 216  Q
    ||||||||||| |||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  4877991 gtgtcggtgtcggacacgacacatgtccgacacaggacacgcctaatccgaggagtgtccgtgcttcataggtat 4878065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 113 - 214
Target Start/End: Complemental strand, 17327690 - 17327588
Alignment:
Q  113 tcacataattcagtgtaattttatgtgtc-gtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcat 210  Q
    |||||||||| ||||||| | |||||||| |||||| |||| ||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||    
T  17327690 tcacataatttagtgtaactatatgtgtcagtgtcg-tgtcggacacgacacgtgtctgacacagggacacgcctaatccgaggagtgtccgtgcttcat 17327592  T
Q  211 aggt 214  Q
    ||||    
T  17327591 aggt 17327588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 137 - 214
Target Start/End: Complemental strand, 8365524 - 8365446
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcataggt 214  Q
    ||||||||||||| || ||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||    
T  8365524 gtgtcgtgtcggtatcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtctccgtgcttcataggt 8365446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 141 - 214
Target Start/End: Complemental strand, 10339126 - 10339052
Alignment:
Q  141 cgtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcataggt 214  Q
    |||||||||||| |||||||||| |||||||||| |||||||| |||||| ||||||||||||||||||||||||    
T  10339126 cgtgtcggtgtcggacacgacacatgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcataggt 10339052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 137 - 214
Target Start/End: Original strand, 18367890 - 18367968
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcataggt 214  Q
    ||||||||||||||||||||||||||| |||| ||||| |||||||| || |||| |||||||||||||||||||||||    
T  18367890 gtgtcgtgtcggtgtcagacacgacacatgtctgacacggggacacgccttatccaaggagtgtccgtgcttcataggt 18367968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 137 - 212
Target Start/End: Original strand, 16766751 - 16766827
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    |||||||||||||||| ||||| |||||||||||||| ||||||||| ||||||||| || ||||||||||||||||    
T  16766751 gtgtcgtgtcggtgtcggacacaacacgtgtccgacaccgggacacgcctaatccgaagaatgtccgtgcttcatag 16766827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 142 - 209
Target Start/End: Complemental strand, 32978910 - 32978842
Alignment:
Q  142 gtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttca 209  Q
    ||||||||||| |||||||||| |||||||||| |||||||||||||||| ||||||||||||||||||    
T  32978910 gtgtcggtgtcggacacgacacatgtccgacaccgggacacgtctaatccaaggagtgtccgtgcttca 32978842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 113 - 212
Target Start/End: Original strand, 7248382 - 7248488
Alignment:
Q  113 tcacataattcagtgtaattttatgtgt------cgtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgc 205  Q
    ||||||||||||| |||||| |||||||      |||||||||||  ||||| ||| ||||||||||| |||||||||| ||||||||||||||||||||    
T  7248382 tcacataattcagggtaattatatgtgttggagtcgtgtcggtgttggacacaacatgtgtccgacaccgggacacgtcaaatccgaggagtgtccgtgc 7248481  T
Q  206 ttcatag 212  Q
    |||||||    
T  7248482 ttcatag 7248488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 24645529 - 24645600
Alignment:
Q  142 gtgtcggtgtcagacacgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    |||||||||||||||||||||||||||||||| |  |||||||||||||||| ||||||| |||||||||||    
T  24645529 gtgtcggtgtcagacacgacacgtgtccgacaccaagacacgtctaatccgaagagtgtctgtgcttcatag 24645600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 28152146 - 28152217
Alignment:
Q  142 gtgtcggtgtcagacacgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||||||||| |||||||||||||||||||| ||||||| | |||||||||||||||| ||||||||||||    
T  28152146 gtgtcggtgtcggacacgacacgtgtccgacaccgggacaggcctaatccgaggagtgttcgtgcttcatag 28152217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 34595182 - 34595253
Alignment:
Q  142 gtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||||||||| ||||||||||||||| ||||| |||||||  |||||||||||||||||||||||||||||    
T  34595182 gtgtcggtgtcggacacgacacgtgtctgacaccgggacacacctaatccgaggagtgtccgtgcttcatag 34595253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 137 - 210
Target Start/End: Complemental strand, 5000631 - 5000557
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgacacg-ggacacgtctaatccgaggagtgtccgtgcttcat 210  Q
    ||||| ||||||||||||||||||||| | ||||||||  ||||||||||||||||| |||||| ||||||||||    
T  5000631 gtgtcatgtcggtgtcagacacgacacatatccgacaccaggacacgtctaatccgaagagtgttcgtgcttcat 5000557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 113 - 212
Target Start/End: Original strand, 9629407 - 9629513
Alignment:
Q  113 tcacataattcagtgtaattttatgtgtcg-tgtcggtgtca-----gacacgacacgtgtccgacacgg-gacacgtctaatccgaggagtgtccgtgc 205  Q
    |||||||||||| ||||||| ||||||||| ||||||||||      ||||| ||| ||||||||||| | ||||||||||||||||||||||||| |||    
T  9629407 tcacataattcaatgtaattatatgtgtcggtgtcggtgtcgtgtcggacacaacatgtgtccgacactgagacacgtctaatccgaggagtgtccatgc 9629506  T
Q  206 ttcatag 212  Q
    |||||||    
T  9629507 ttcatag 9629513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 146 - 211
Target Start/End: Complemental strand, 17841596 - 17841530
Alignment:
Q  146 cggtgtcagacacgacacgtgtccgacacgg-gacacgtctaatccgaggagtgtccgtgcttcata 211  Q
    ||||||| ||||||||| ||||||||||| | |||||| ||||||||||||||||||||||||||||    
T  17841596 cggtgtcggacacgacatgtgtccgacactgagacacgcctaatccgaggagtgtccgtgcttcata 17841530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 142 - 215
Target Start/End: Original strand, 28715343 - 28715417
Alignment:
Q  142 gtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcataggta 215  Q
    ||||||||||| |||||||||||||| |||||| |||||||| ||||| |||| ||||| |||||||||||||||    
T  28715343 gtgtcggtgtcggacacgacacgtgttcgacaccgggacacgcctaattcgagaagtgtacgtgcttcataggta 28715417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 154 - 214
Target Start/End: Complemental strand, 8776967 - 8776906
Alignment:
Q  154 gacacgacacgtgtccgacacgg-gacacgtctaatccgaggagtgtccgtgcttcataggt 214  Q
    ||||||||||||||||||||| | |||||  |||||||||||||||||||||||||||||||    
T  8776967 gacacgacacgtgtccgacaccgagacacacctaatccgaggagtgtccgtgcttcataggt 8776906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 137 - 212
Target Start/End: Original strand, 8714034 - 8714110
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    |||||||||||||||| |||||||||| | ||||||| ||||||||| | |||||||||||||||  ||||||||||    
T  8714034 gtgtcgtgtcggtgtcggacacgacacatttccgacatcgggacacgcccaatccgaggagtgtctttgcttcatag 8714110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 137 - 212
Target Start/End: Complemental strand, 9107375 - 9107299
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    |||||||||||||||| ||||| ||  ||||||||||| |||||||  ||||||||||||||| |||||||||||||    
T  9107375 gtgtcgtgtcggtgtcggacacaacgtgtgtccgacaccgggacacacctaatccgaggagtgcccgtgcttcatag 9107299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 113 - 211
Target Start/End: Original strand, 31384944 - 31385048
Alignment:
Q  113 tcacataattcagtgtaattttatgtgtc-gtgtcg----gtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgct 206  Q
    ||||||||||||||||||||  | ||||| ||||||    ||||  |||||||||||||||| |||| |||||||| ||||||| |||||||||||||||    
T  31384944 tcacataattcagtgtaattacaagtgtcagtgtcgtgtagtgttggacacgacacgtgtcctacaccgggacacgcctaatccaaggagtgtccgtgct 31385043  T
Q  207 tcata 211  Q
    |||||    
T  31385044 tcata 31385048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 115 - 212
Target Start/End: Original strand, 34446591 - 34446690
Alignment:
Q  115 acataattcagtgtaattttatgtgtcgtgtcggtgtcagaca-cgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    |||||||||||||||||  || ||||||||||||||||  ||| |||| ||| || ||||| |||||||  ||||||| |||||||||||||||||||||    
T  34446591 acataattcagtgtaatcataggtgtcgtgtcggtgtccaacaccgacgcgtatctgacactgggacacacctaatccaaggagtgtccgtgcttcatag 34446690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 117 - 209
Target Start/End: Complemental strand, 8389503 - 8389411
Alignment:
Q  117 ataattcagtgtaattttatgtgtcgtgtcggtgtcagacacgacacg-tgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttca 209  Q
    |||||||||||||||| || ||||| |||||||||| ||| | ||||| |||||||||| |||||||  ||||||||||||||||||||||||||    
T  8389503 ataattcagtgtaattata-gtgtcatgtcggtgtcggac-caacacggtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttca 8389411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 137 - 212
Target Start/End: Original strand, 3209442 - 3209518
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgacacg-ggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    |||||||||| |||||  |||||||||| |||||||||  ||||||| ||||||||||||||||  |||||||||||    
T  3209442 gtgtcgtgtcagtgtcgaacacgacacgcgtccgacacccggacacgcctaatccgaggagtgtttgtgcttcatag 3209518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 137 - 212
Target Start/End: Complemental strand, 5970113 - 5970037
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    |||||||||||||||| |||||||||| | ||||||| ||||||||| | ||||||||||||| |  ||||||||||    
T  5970113 gtgtcgtgtcggtgtcggacacgacacatttccgacatcgggacacgcccaatccgaggagtgactatgcttcatag 5970037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 113 - 212
Target Start/End: Original strand, 7378003 - 7378098
Alignment:
Q  113 tcacataattcagtgtaattttatgtgtcgtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcata 211  Q
    |||||||||||| ||||||| |||||||||     ||||| ||||||||| |  |||||||| |||||||| |||||| ||| |||||||||||||||||    
T  7378003 tcacataattcaatgtaattatatgtgtcg-----gtgtcggacacgacatgcatccgacaccgggacacggctaatctgagaagtgtccgtgcttcata 7378097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 113 - 211
Target Start/End: Original strand, 9658903 - 9658998
Alignment:
Q  113 tcacataattcagtgtaattttatgtgtcgtgtcggtgtcagacacgacacgtgtccgaca-cgggacacgtctaa-tccgaggagtgtccgtgcttcat 210  Q
    |||||||||||||||||||| |||      ||||||||| |||||||||||||||| |||| ||| ||||| |||| ||| |||||||||||||||||||    
T  9658903 tcacataattcagtgtaattatat-----ttgtcggtgttagacacgacacgtgtctgacaccggaacacgcctaattccaaggagtgtccgtgcttcat 9658997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 113 - 212
Target Start/End: Complemental strand, 10770709 - 10770607
Alignment:
Q  113 tcacataattcagtgtaattttatgtgtcg-tgtcggtgtcagacacgacac--gtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttc 208  Q
    ||||||||||||||||||||  | |||||| ||||| |||||||||||||||  ||||||||  | |||||| | |||||| ||||||||||||||||||    
T  10770709 tcacataattcagtgtaattacaagtgtcggtgtcg-tgtcagacacgacacacgtgtccgatgccgggacatgcctaatctgaggagtgtccgtgcttc 10770611  T
Q  209 atag 212  Q
    ||||    
T  10770610 atag 10770607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 113 - 212
Target Start/End: Complemental strand, 13360407 - 13360313
Alignment:
Q  113 tcacataattcagtgtaattttatgtgtcgtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcata 211  Q
    |||||||||||||||||||| |||     || |||||||||||||| |||  |||||||||| | |||||| ||||||||| ||||||||||||||||||    
T  13360407 tcacataattcagtgtaattatat-----gtttcggtgtcagacacaaca-atgtccgacactgagacacgcctaatccgaagagtgtccgtgcttcata 13360314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 137 - 212
Target Start/End: Complemental strand, 16488595 - 16488519
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    |||||||||||||||| ||||||||||||||| | ||| |||||||| || |||| |||| ||| ||||||||||||    
T  16488595 gtgtcgtgtcggtgtcggacacgacacgtgtctggcacggggacacgccttatccaaggaatgttcgtgcttcatag 16488519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 137 - 212
Target Start/End: Complemental strand, 34073352 - 34073278
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||||||||||||||  |||||||| ||| ||||||| ||||||| |||||| |||||||||||||||||||||||    
T  34073352 gtgtcgtgtcggtgtct-acacgacatgtg-ccgacaccgggacacctctaattcgaggagtgtccgtgcttcatag 34073278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 115 - 211
Target Start/End: Original strand, 1532266 - 1532366
Alignment:
Q  115 acataattcagtgtaattttatgtg---tcgtgtcggtgtcagacacgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgcttcat 210  Q
    |||||||||||||||||| ||||||   |||||| |||||||||||  |||| ||| | ||| |||| ||  |||||| |||||||||||||||||||||    
T  1532266 acataattcagtgtaattatatgtggtgtcgtgttggtgtcagacatcacacatgttctacatcggggcatatctaattcgaggagtgtccgtgcttcat 1532365  T
Q  211 a 211  Q
    |    
T  1532366 a 1532366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 137 - 214
Target Start/End: Original strand, 10294161 - 10294239
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgacacg-ggacacgtctaatccgaggagtgtccgtgcttcataggt 214  Q
    ||||||||| |||||| ||||||||| |||||||| ||  ||||||  |||||| |||||||||| |||||||||||||    
T  10294161 gtgtcgtgttggtgtcggacacgacatgtgtccgaaactaggacacagctaatctgaggagtgtctgtgcttcataggt 10294239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 143 - 212
Target Start/End: Original strand, 17435259 - 17435329
Alignment:
Q  143 tgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||| |||| |||||||||||||| |||||| ||||||||||||||| ||  ||||||||| ||||||||    
T  17435259 tgtcgatgtcggacacgacacgtgttcgacactgggacacgtctaatctgaaaagtgtccgtacttcatag 17435329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 158 - 211
Target Start/End: Original strand, 31959214 - 31959268
Alignment:
Q  158 cgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcata 211  Q
    ||||| ||||||||||| |||||||  ||||||||||||||||||||||||||||    
T  31959214 cgacatgtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 31959268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 167 - 212
Target Start/End: Original strand, 6389806 - 6389851
Alignment:
Q  167 tccgacacgggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    |||||||||||||||  |||||||||| ||||||||||||||||||    
T  6389806 tccgacacgggacactcctaatccgagaagtgtccgtgcttcatag 6389851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 115 - 210
Target Start/End: Original strand, 12696350 - 12696446
Alignment:
Q  115 acataattcagtgtaattttatgtgtc-gtgtcggtgtcagacacgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgcttcat 210  Q
    ||||||||||||||||||  | ||||| |||||| |||| ||||||||||||||| |||| ||||||||  || |||| ||||||||| |||||||||    
T  12696350 acataattcagtgtaattacaagtgtcagtgtcg-tgtcggacacgacacgtgtctgacaccgggacacaccttatccaaggagtgtctgtgcttcat 12696446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 142 - 213
Target Start/End: Original strand, 16833356 - 16833428
Alignment:
Q  142 gtgtcggtgtcagacacgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgcttcatagg 213  Q
    |||||||||| |||||||||||| |||||||| | ||||||  | ||||||||||||||| || |||||||||    
T  16833356 gtgtcggtgttagacacgacacgcgtccgacaccaggacacaccgaatccgaggagtgtctgtacttcatagg 16833428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 160 - 212
Target Start/End: Original strand, 28648350 - 28648402
Alignment:
Q  160 acacgtgtccgacacgggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    |||||||||| |||||||||||| ||||||||| |||||||| |||| |||||    
T  28648350 acacgtgtcctacacgggacacgcctaatccgatgagtgtccttgctccatag 28648402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 209
Target Start/End: Complemental strand, 9025495 - 9025448
Alignment:
Q  163 cgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttca 209  Q
    |||||||||||| |||||||| |||||||||| |||||||||||||||    
T  9025495 cgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttca 9025448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 212
Target Start/End: Original strand, 10842617 - 10842652
Alignment:
Q  177 gacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    |||||| |||||||||||||||||||||||||||||    
T  10842617 gacacggctaatccgaggagtgtccgtgcttcatag 10842652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 210
Target Start/End: Complemental strand, 7265628 - 7265535
Alignment:
Q  113 tcacataattcagtgtaattttatgtgtcgtgtcggtgtcagacacgacacgtgtccgacacgggac-acgtctaatccgaggagtgtccgtgcttcat 210  Q
    |||||||||||||||||||| |||||||||     ||||| ||||| | || |||||||||| |||  | | ||||||||||||| |||||||||||||    
T  7265628 tcacataattcagtgtaattatatgtgtcg-----gtgtcggacacaatacatgtccgacaccggaatatgcctaatccgaggagcgtccgtgcttcat 7265535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 178 - 212
Target Start/End: Complemental strand, 7723233 - 7723199
Alignment:
Q  178 acacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||| |||||||||||||||||||||||||||||    
T  7723233 acacgcctaatccgaggagtgtccgtgcttcatag 7723199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 175 - 213
Target Start/End: Complemental strand, 8805561 - 8805523
Alignment:
Q  175 gggacacgtctaatccgaggagtgtccgtgcttcatagg 213  Q
    |||||| | ||||||||||||||||||||||||||||||    
T  8805561 gggacatgcctaatccgaggagtgtccgtgcttcatagg 8805523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 176 - 214
Target Start/End: Original strand, 10649371 - 10649409
Alignment:
Q  176 ggacacgtctaatccgaggagtgtccgtgcttcataggt 214  Q
    ||||||| ||||||| |||||||||||||||||||||||    
T  10649371 ggacacgcctaatccaaggagtgtccgtgcttcataggt 10649409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 138 - 207
Target Start/End: Original strand, 11352416 - 11352486
Alignment:
Q  138 tgtcgtgtcggtgtcagacacgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgctt 207  Q
    |||||||||||| |||||||| |||||||||||||| | |||||||| | | || | ||||||||||||||    
T  11352416 tgtcgtgtcggtatcagacacaacacgtgtccgacatcaggacacgttttacccaaagagtgtccgtgctt 11352486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 176 - 213
Target Start/End: Complemental strand, 426514 - 426477
Alignment:
Q  176 ggacacgtctaatccgaggagtgtccgtgcttcatagg 213  Q
    ||||||| |||||| |||||||||||||||||||||||    
T  426514 ggacacgcctaatctgaggagtgtccgtgcttcatagg 426477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 164 - 212
Target Start/End: Original strand, 7938170 - 7938219
Alignment:
Q  164 gtgtccgacacgg-gacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||||||||| | |||||| || ||||||||||||||||||||||||||    
T  7938170 gtgtccgacaccgagacacgcctgatccgaggagtgtccgtgcttcatag 7938219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 142 - 214
Target Start/End: Complemental strand, 13364716 - 13364643
Alignment:
Q  142 gtgtcggtgtcagacacgacacgtgtccgacacg-ggacacgtctaatccgaggagtgtccgtgcttcataggt 214  Q
    ||||||||||  ||||||| || |||| |||||  ||||||||||| ||||| ||||||| |||||||||||||    
T  13364716 gtgtcggtgttggacacgatacatgtctgacaccaggacacgtctattccgacgagtgtctgtgcttcataggt 13364643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 140 - 212
Target Start/End: Original strand, 26247477 - 26247550
Alignment:
Q  140 tcgtgtcggtgtcagacacga-cacgtgtccgacacgggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||||||||||| ||||| | |||||||| ||||| | ||||  |||||| |||||||||||||| |||||||    
T  26247477 tcgtgtcggtgtcggacaccaacacgtgtctgacaccgaacacacctaatctgaggagtgtccgtgtttcatag 26247550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 117 - 199
Target Start/End: Original strand, 3398646 - 3398729
Alignment:
Q  117 ataattcagtgtaattttatgtgtcg-tgtcggtgtcagacacgacacgtgtccgacacggga-cacgtctaatccgaggagtgt 199  Q
    |||||||||||||||| || || ||| ||||| |||  |||||||||| |||||||||| ||| ||||||||||| |||||||||    
T  3398646 ataattcagtgtaattataagtatcggtgtcg-tgttggacacgacacatgtccgacaccggaacacgtctaatcagaggagtgt 3398729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 176 - 212
Target Start/End: Complemental strand, 5732510 - 5732474
Alignment:
Q  176 ggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||||| |||||||||||||||||| ||||||||||    
T  5732510 ggacacgcctaatccgaggagtgtccatgcttcatag 5732474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 142 - 213
Target Start/End: Complemental strand, 6898292 - 6898220
Alignment:
Q  142 gtgtcggtgtcagacacgacacgtgtccgacacggga-cacgtctaatccgaggagtgtccgtgcttcatagg 213  Q
    ||||||||||| |||||||  ||||||| |||| | | |||| ||||||||| |||||| |||||||||||||    
T  6898292 gtgtcggtgtcggacacgaagcgtgtccaacaccgaaacacgcctaatccgatgagtgttcgtgcttcatagg 6898220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 141 - 212
Target Start/End: Complemental strand, 9526030 - 9525958
Alignment:
Q  141 cgtgtcggtgtcagacacgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||||||||| ||||||||||||||||| ||| || || ||||||||  | |||| |||| |||||||||||    
T  9526030 cgtgtcggtgttagacacgacacgtgtccaacatcgagatacgtctaactcaaggaatgtctgtgcttcatag 9525958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 142 - 214
Target Start/End: Complemental strand, 12868691 - 12868614
Alignment:
Q  142 gtgtcggtgtcagacacgacacg----tgtccgacacggga-cacgtctaatccgaggagtgtccgtgcttcataggt 214  Q
    ||||||||||| ||||||||| |    |||||||||||||| |||| |||||||||  |||||| |||||||||||||    
T  12868691 gtgtcggtgtcggacacgacatgcacatgtccgacacgggaacacgcctaatccgataagtgtcggtgcttcataggt 12868614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 137 - 208
Target Start/End: Complemental strand, 23130477 - 23130405
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgcttc 208  Q
    ||||| ||| |||||||||||||||||||||| || | ||||||| | |||||| |||||||||  |||||||    
T  23130477 gtgtcatgttggtgtcagacacgacacgtgtctgatatcgggacatgcctaatctgaggagtgtatgtgcttc 23130405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 58; Significance: 3e-24; HSPs: 64)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 113 - 212
Target Start/End: Original strand, 36635348 - 36635449
Alignment:
Q  113 tcacataattcagtgtaattttatgtgt-cgtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcat 210  Q
    |||||||||||||||||||| ||||||| |||||  ||||||||||||||||| ||| ||||| |||||||| ||||||||| |||||||||||||||||    
T  36635348 tcacataattcagtgtaattatatgtgttcgtgtgagtgtcagacacgacacgcgtcagacaccgggacacgcctaatccgaagagtgtccgtgcttcat 36635447  T
Q  211 ag 212  Q
    ||    
T  36635448 ag 36635449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 23292997 - 23292926
Alignment:
Q  142 gtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||||||||| ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  23292997 gtgtcggtgtcggacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 23292926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 115 - 212
Target Start/End: Original strand, 24343533 - 24343632
Alignment:
Q  115 acataattcagtgtaattttatgtgtcgtgtcggtgtcagaca-cgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    |||||||||||||||||| || |||||||||||||||| |||| |||| ||||||||||| ||||||||| ||| || ||||||||||||||||||||||    
T  24343533 acataattcagtgtaattataggtgtcgtgtcggtgtccgacaccgacgcgtgtccgacaccgggacacgcctattctgaggagtgtccgtgcttcatag 24343632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 137 - 215
Target Start/End: Complemental strand, 24613706 - 24613627
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgacacg-ggacacgtctaatccgaggagtgtccgtgcttcataggta 215  Q
    ||||| |||||||||||||||||||||||||| |||||  ||||||||||||||| ||||||||||||||||||||||||    
T  24613706 gtgtcatgtcggtgtcagacacgacacgtgtctgacaccaggacacgtctaatcctaggagtgtccgtgcttcataggta 24613627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 137 - 211
Target Start/End: Complemental strand, 30982883 - 30982808
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgcttcata 211  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| | ||||||||||||||||||    
T  30982883 gtgtcgtgtcggtgtcagacacgacacgtgtccgacaccgggacacgcctaatccaaagagtgtccgtgcttcata 30982808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 113 - 215
Target Start/End: Complemental strand, 22234925 - 22234816
Alignment:
Q  113 tcacataattcagtgtaattttatgtgtcg------tgtcggtgtcagacacgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgc 205  Q
    |||||||||||||||||||| |||||||||      |||||||||| |||||||||||||||||||| | ||||||  |||||||||| ||||| |||||    
T  22234925 tcacataattcagtgtaattctatgtgtcggtgtcgtgtcggtgtctgacacgacacgtgtccgacaccaggacacagctaatccgagaagtgttcgtgc 22234826  T
Q  206 ttcataggta 215  Q
    ||||||||||    
T  22234825 ttcataggta 22234816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 119 - 214
Target Start/End: Complemental strand, 53381625 - 53381528
Alignment:
Q  119 aattcagtgtaattttatgtgtcgtgtcggtgtcagacac-gacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcataggt 214  Q
    |||||||||||||| || | |||||||||||||| ||||| ||| ||| |||||||| |||||||  |||||||||||||||||||||||||||||||    
T  53381625 aattcagtgtaattataggcgtcgtgtcggtgtcggacactgacgcgtatccgacaccgggacacacctaatccgaggagtgtccgtgcttcataggt 53381528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 148 - 211
Target Start/End: Complemental strand, 14465070 - 14465006
Alignment:
Q  148 gtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcata 211  Q
    |||||||||||||||||||| |||||| ||||||||||||||| |||||||||||||||||||||    
T  14465070 gtgtcagacacgacacgtgttcgacactgggacacgtctaatctgaggagtgtccgtgcttcata 14465006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 137 - 214
Target Start/End: Original strand, 19482722 - 19482800
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcataggt 214  Q
    ||||||||||||| |  ||||||||||||||||||||| |||||||  |||||||||||||||| ||||||||||||||    
T  19482722 gtgtcgtgtcggtattggacacgacacgtgtccgacactgggacacacctaatccgaggagtgttcgtgcttcataggt 19482800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 116 - 211
Target Start/End: Complemental strand, 3947798 - 3947702
Alignment:
Q  116 cataattcagtgtaattttatgtgtc-gtgtcggtgtcagacacgacacgtgtccgacacg-ggacacgtctaatccgaggagtgtccgtgcttcata 211  Q
    |||||||||||||||||  | ||||| |||||| |||| |||||||||||||||||||||  ||||||  ||||||||||||||||||||||||||||    
T  3947798 cataattcagtgtaattacaagtgtcagtgtcg-tgtcggacacgacacgtgtccgacaccaggacacacctaatccgaggagtgtccgtgcttcata 3947702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 117 - 212
Target Start/End: Complemental strand, 3144683 - 3144587
Alignment:
Q  117 ataattcagtgtaattttatgtgtcgtgtcggtgtcagacacga-cacgtgtccgacacgggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    |||||| ||||||||  || |||||||||||||||||||||| | | ||||||| ||||| |||||  |||||||||| ||||||||||||||||||    
T  3144683 ataatttagtgtaatcataggtgtcgtgtcggtgtcagacaccaacgcgtgtccaacacgagacacacctaatccgagaagtgtccgtgcttcatag 3144587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 12895285 - 12895214
Alignment:
Q  142 gtgtcggtgtcagacacgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||||||||| ||||||||| || ||||||| ||||||||| |||||||||||||||| ||||||||||||    
T  12895285 gtgtcggtgtcggacacgacatgtatccgacatcgggacacgcctaatccgaggagtgttcgtgcttcatag 12895214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 155 - 212
Target Start/End: Complemental strand, 715603 - 715545
Alignment:
Q  155 acacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||||||| |||||||||| |||||||| |||||||||||||||||||||||||||||    
T  715603 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 715545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 155 - 212
Target Start/End: Complemental strand, 752929 - 752871
Alignment:
Q  155 acacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||||||| |||||||||| |||||||| |||||||||||||||||||||||||||||    
T  752929 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 752871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 137 - 212
Target Start/End: Complemental strand, 5414177 - 5414101
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    |||||||||| ||||| ||||||||||||||| ||||| |||||||  || |||| |||||||||||||||||||||    
T  5414177 gtgtcgtgtcagtgtcggacacgacacgtgtctgacacagggacacaccttatccaaggagtgtccgtgcttcatag 5414101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 137 - 219
Target Start/End: Original strand, 16184874 - 16184957
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcataggtataca 219  Q
    ||||||||||||||||  | ||||  | |||||||||| |||||||| ||||||||||||||||  ||||||||||||||||||    
T  16184874 gtgtcgtgtcggtgtcgcatacgatgcctgtccgacactgggacacgcctaatccgaggagtgtttgtgcttcataggtataca 16184957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 159 - 209
Target Start/End: Original strand, 28084589 - 28084640
Alignment:
Q  159 gacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttca 209  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  28084589 gacacgtgtccgacactgggacacgcctaatccgaggagtgtccgtgcttca 28084640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 28964259 - 28964188
Alignment:
Q  142 gtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||| ||||| |||||||||| | |||||||| |||||||| |||||||||||||||||| ||||||||||    
T  28964259 gtgtctgtgtcggacacgacacatatccgacactgggacacgcctaatccgaggagtgtccatgcttcatag 28964188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 154 - 212
Target Start/End: Original strand, 29205528 - 29205587
Alignment:
Q  154 gacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    |||||||||| |||||||||| |||||||| |||||||||||||||| ||||||||||||    
T  29205528 gacacgacacatgtccgacactgggacacgcctaatccgaggagtgttcgtgcttcatag 29205587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 174 - 213
Target Start/End: Original strand, 30299010 - 30299049
Alignment:
Q  174 cgggacacgtctaatccgaggagtgtccgtgcttcatagg 213  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  30299010 cgggacacgtctaatccgaggagtgtccgtgcttcatagg 30299049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 174 - 213
Target Start/End: Original strand, 30327878 - 30327917
Alignment:
Q  174 cgggacacgtctaatccgaggagtgtccgtgcttcatagg 213  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  30327878 cgggacacgtctaatccgaggagtgtccgtgcttcatagg 30327917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 34306815 - 34306744
Alignment:
Q  142 gtgtcggtgtcagacacgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||||||||| |||||||||||||||||||| || |||||| |||||| ||||| ||| ||||||||||||    
T  34306815 gtgtcggtgtcggacacgacacgtgtccgacaccgagacacgcctaatctgaggaatgttcgtgcttcatag 34306744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 49431074 - 49431145
Alignment:
Q  142 gtgtcggtgtcagacacgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||||||||| |||||||||||||||| ||| ||||||||| || ||||||||||||||| ||||| ||||    
T  49431074 gtgtcggtgtcggacacgacacgtgtccaacaccgggacacgccttatccgaggagtgtccatgctttatag 49431145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 119 - 211
Target Start/End: Original strand, 12323944 - 12324038
Alignment:
Q  119 aattcagtgtaattttatgtgtc-gtgtcggtgtcagacacgacacgtgtccgacacggga-cacgtctaatccgaggagtgtccgtgcttcata 211  Q
    |||||||||||||| ||| |||| ||||||||||| |||| |||||||||  | ||||||| |||  || |||||||||||||||||||||||||    
T  12323944 aattcagtgtaattatatatgtcagtgtcggtgtcggacatgacacgtgtgtggcacgggaacacaccttatccgaggagtgtccgtgcttcata 12324038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 159 - 212
Target Start/End: Complemental strand, 12884401 - 12884347
Alignment:
Q  159 gacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||||||| ||||| |||| ||||||||||||||||||||||||||||||||||    
T  12884401 gacacgtgttcgacatcggggcacgtctaatccgaggagtgtccgtgcttcatag 12884347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 137 - 210
Target Start/End: Original strand, 19312389 - 19312463
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgcttcat 210  Q
    ||||||||||| |||| || ||||||||||||||||| || ||||||||||||| ||| |||||||||| |||||    
T  19312389 gtgtcgtgtcgttgtcggatacgacacgtgtccgacaccgagacacgtctaatctgagaagtgtccgtgtttcat 19312463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 142 - 214
Target Start/End: Original strand, 16073442 - 16073515
Alignment:
Q  142 gtgtcggtgtcagacacgacacgtgtccgacacgg-gacacgtctaatccgaggagtgtccgtgcttcataggt 214  Q
    ||||||||||| ||||||| || ||||||||||   |||||| |||||||||||||||||| ||||||||||||    
T  16073442 gtgtcggtgtcggacacgatacatgtccgacactaagacacgcctaatccgaggagtgtccatgcttcataggt 16073515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 155 - 214
Target Start/End: Complemental strand, 3064926 - 3064866
Alignment:
Q  155 acacgacacgtgtccgacacgg-gacacgtctaatccgaggagtgtccgtgcttcataggt 214  Q
    ||||||||| |||||||| | | |||||| |||||||||||||||||||||||||||||||    
T  3064926 acacgacacatgtccgactctgagacacgcctaatccgaggagtgtccgtgcttcataggt 3064866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 142 - 208
Target Start/End: Complemental strand, 20743278 - 20743210
Alignment:
Q  142 gtgtcggtgtcagacac-gacacgtgtccgacacggga-cacgtctaatccgaggagtgtccgtgcttc 208  Q
    |||||| |||||||||| |||||||||||||||| ||| ||| |||||||||| |||||||||||||||    
T  20743278 gtgtcgatgtcagacaccgacacgtgtccgacaccggaacacatctaatccgatgagtgtccgtgcttc 20743210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 174 - 213
Target Start/End: Complemental strand, 5775342 - 5775303
Alignment:
Q  174 cgggacacgtctaatccgaggagtgtccgtgcttcatagg 213  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  5775342 cgggacacgcctaatccgaggagtgtccgtgcttcatagg 5775303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 137 - 207
Target Start/End: Original strand, 30838264 - 30838335
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgctt 207  Q
    |||||||||| ||||| ||| |||||||||||||||| |  |||||| |||| |||||||||||||||||||    
T  30838264 gtgtcgtgtcagtgtcggacgcgacacgtgtccgacaccaagacacgcctaacccgaggagtgtccgtgctt 30838335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 165 - 212
Target Start/End: Complemental strand, 34515858 - 34515811
Alignment:
Q  165 tgtccgacacgggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    |||||||||||||||||||||||||| ||||||||| ||| |||||||    
T  34515858 tgtccgacacgggacacgtctaatccaaggagtgtctgtgattcatag 34515811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 35157996 - 35157925
Alignment:
Q  142 gtgtcggtgtcagacacgacacgtgtccgacacggga-cacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||||||||| |||||||||| ||||| |||| ||| ||||  ||||||||| ||||||||||||||||||    
T  35157996 gtgtcggtgtctgacacgacacatgtccaacaccggaacacgcttaatccgagaagtgtccgtgcttcatag 35157925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 166 - 212
Target Start/End: Original strand, 37203324 - 37203371
Alignment:
Q  166 gtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  37203324 gtccgacaccgggacacgtctaatccgagaagtgtccgtgcttcatag 37203371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 169 - 211
Target Start/End: Original strand, 4383442 - 4383484
Alignment:
Q  169 cgacacgggacacgtctaatccgaggagtgtccgtgcttcata 211  Q
    |||||| ||||||| ||||||||||||||||||||||||||||    
T  4383442 cgacaccggacacgcctaatccgaggagtgtccgtgcttcata 4383484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 143 - 212
Target Start/End: Complemental strand, 8423728 - 8423658
Alignment:
Q  143 tgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    |||||||||| |||||||||  |||||||||| |||||||| |||||| ||| ||||||||||| ||||||    
T  8423728 tgtcggtgtcggacacgacagctgtccgacaccgggacacgcctaatcggagaagtgtccgtgcgtcatag 8423658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 11596345 - 11596295
Alignment:
Q  165 tgtccgaca-cgggacacgtctaatccgaggagtgtccgtgcttcataggt 214  Q
    ||||||||| ||||||||| |||||| ||||||||||||||||||||||||    
T  11596345 tgtccgacatcgggacacgcctaatctgaggagtgtccgtgcttcataggt 11596295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 115 - 212
Target Start/End: Complemental strand, 19230342 - 19230241
Alignment:
Q  115 acataattcagtgtaattttatgtgtcgtgt--cggtgtcagacac-gacacgtgtccgac-acgggacacgtctaatccgaggagtgtccgtgcttcat 210  Q
    |||||||||| ||||||| || |||||||||  ||||||||||||| ||  ||||| |||| || |||||| |||||||||| |||||||||| ||||||    
T  19230342 acataattcaatgtaattataggtgtcgtgtgtcggtgtcagacacggatgcgtgttcgacaacaggacacatctaatccgaagagtgtccgtacttcat 19230243  T
Q  211 ag 212  Q
    ||    
T  19230242 ag 19230241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 162 - 210
Target Start/End: Complemental strand, 22440608 - 22440559
Alignment:
Q  162 acgtgtccgacacg-ggacacgtctaatccgaggagtgtccgtgcttcat 210  Q
    |||||||||||||  ||||||| |||||||||||||||||||||||||||    
T  22440608 acgtgtccgacactaggacacgcctaatccgaggagtgtccgtgcttcat 22440559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 163 - 212
Target Start/End: Original strand, 23386228 - 23386277
Alignment:
Q  163 cgtgtccgacacgggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||||||||| |||||| | |||||| ||||||||||||||||||||||    
T  23386228 cgtgtccgacaagggacatgcctaatcagaggagtgtccgtgcttcatag 23386277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 154 - 214
Target Start/End: Original strand, 35161096 - 35161157
Alignment:
Q  154 gacacgacacgtgtccgacacggga-cacgtctaatccgaggagtgtccgtgcttcataggt 214  Q
    ||||||||||||||||||||| ||| |||  |||||||||  ||||||||||||||||||||    
T  35161096 gacacgacacgtgtccgacaccggaacacacctaatccgaaaagtgtccgtgcttcataggt 35161157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 113 - 174
Target Start/End: Original strand, 40481660 - 40481721
Alignment:
Q  113 tcacataattcagtgtaattttatgtgtcgtgtcggtgtcagacacgacacgtgtccgacac 174  Q
    ||||||||||||||||||||  | ||||  |||||||||  |||||||||||||||||||||    
T  40481660 tcacataattcagtgtaattacaagtgttatgtcggtgttggacacgacacgtgtccgacac 40481721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 176 - 212
Target Start/End: Complemental strand, 824252 - 824216
Alignment:
Q  176 ggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    |||||||||||||||||||| ||||||||||||||||    
T  824252 ggacacgtctaatccgaggactgtccgtgcttcatag 824216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 113 - 212
Target Start/End: Original strand, 903946 - 904052
Alignment:
Q  113 tcacataattcagtgtaattttatgtgtc------gtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgc 205  Q
    |||||||||||||||||||| ||||| ||      || |||||||  ||||||||| ||||||||||| ||||||| |||||||| || | ||||| |||    
T  903946 tcacataattcagtgtaattatatgtatcagtatcgtatcggtgttggacacgacatgtgtccgacactgggacacatctaatccaagaaatgtccttgc 904045  T
Q  206 ttcatag 212  Q
    |||||||    
T  904046 ttcatag 904052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 2361986 - 2361915
Alignment:
Q  142 gtgtcggtgtcagacacgacacgtgtccgacacgg-gacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||||||||| |||||||| |||||| ||||| | |||||  |||||| || |||||||||||||||||||    
T  2361986 gtgtcggtgtcggacacgactcgtgtctgacaccgagacacacctaatctgacgagtgtccgtgcttcatag 2361915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 142 - 208
Target Start/End: Complemental strand, 12797349 - 12797282
Alignment:
Q  142 gtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttc 208  Q
    ||||||||||| ||||||| || |||| ||||| |||||| |||||||||||||| ||| ||||||||    
T  12797349 gtgtcggtgtcggacacgatacatgtctgacaccgggacaagtctaatccgaggaatgttcgtgcttc 12797282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 214
Target Start/End: Complemental strand, 18513224 - 18513173
Alignment:
Q  164 gtgtccgacacg-ggacacgtctaatccgaggagtgtccgtgcttcataggt 214  Q
    |||||||||||  ||||||| |||||| ||||||||||||||||||||||||    
T  18513224 gtgtccgacaccaggacacgcctaatctgaggagtgtccgtgcttcataggt 18513173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 154 - 212
Target Start/End: Original strand, 18966569 - 18966628
Alignment:
Q  154 gacacgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||| |||||||||||||| ||||| ||| ||||||  |||||||||||||||||||||    
T  18966569 gacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtccgtgcttcatag 18966628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 30103368 - 30103297
Alignment:
Q  142 gtgtcggtgtcagacacgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    |||||||||||| ||||||||  |||| |||| | |||||| ||||||||||||||||||  ||||||||||    
T  30103368 gtgtcggtgtcaaacacgacatatgtctgacatcaggacacatctaatccgaggagtgtctctgcttcatag 30103297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 211
Target Start/End: Original strand, 35239202 - 35239237
Alignment:
Q  176 ggacacgtctaatccgaggagtgtccgtgcttcata 211  Q
    |||||||||||||||||||||||||||||| |||||    
T  35239202 ggacacgtctaatccgaggagtgtccgtgcctcata 35239237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 174 - 213
Target Start/End: Original strand, 40784034 - 40784073
Alignment:
Q  174 cgggacacgtctaatccgaggagtgtccgtgcttcatagg 213  Q
    ||||||||  ||||||||||||||||||||||||||||||    
T  40784034 cgggacacacctaatccgaggagtgtccgtgcttcatagg 40784073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 162 - 207
Target Start/End: Complemental strand, 3712504 - 3712458
Alignment:
Q  162 acgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgctt 207  Q
    ||||||||||||| |||||||| |||||| |||||||||||||||||    
T  3712504 acgtgtccgacaccgggacacggctaatctgaggagtgtccgtgctt 3712458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 160 - 210
Target Start/End: Original strand, 7424724 - 7424774
Alignment:
Q  160 acacgtgtccgacacgggacacgtctaatccgaggagtgtccgtgcttcat 210  Q
    ||||||||||||||| | ||||| ||||||| |||||||||| ||||||||    
T  7424724 acacgtgtccgacaccgtacacgcctaatccaaggagtgtccatgcttcat 7424774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 212
Target Start/End: Original strand, 28470446 - 28470484
Alignment:
Q  174 cgggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||||| | |||||||||||||||||||||||||||||    
T  28470446 cgggacatgcctaatccgaggagtgtccgtgcttcatag 28470484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 159 - 212
Target Start/End: Original strand, 42640589 - 42640643
Alignment:
Q  159 gacacgtgtccgacacg-ggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    |||||||||||| |||  ||||||| |||||||||||||| ||||||||||||||    
T  42640589 gacacgtgtccggcaccaggacacgcctaatccgaggagtttccgtgcttcatag 42640643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 142 - 210
Target Start/End: Original strand, 4157197 - 4157266
Alignment:
Q  142 gtgtcggtgtcagacacgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgcttcat 210  Q
    ||||||||||| |||||||||| ||||||||| || || ||  ||||| ||||||||||| |||||||||    
T  4157197 gtgtcggtgtcggacacgacacatgtccgacaccgagaaacacctaattcgaggagtgtctgtgcttcat 4157266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 142 - 210
Target Start/End: Original strand, 4157484 - 4157553
Alignment:
Q  142 gtgtcggtgtcagacacgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgcttcat 210  Q
    ||||||||||| |||||||||| ||||||||| || || ||| ||||| |||||||||||  ||||||||    
T  4157484 gtgtcggtgtcggacacgacacatgtccgacaccgagaaacgcctaattcgaggagtgtctatgcttcat 4157553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 199
Target Start/End: Complemental strand, 21873356 - 21873315
Alignment:
Q  159 gacacgtgtccgacac-gggacacgtctaatccgaggagtgt 199  Q
    |||||||||||||||| |||||||||||||||| ||||||||    
T  21873356 gacacgtgtccgacaccgggacacgtctaatccaaggagtgt 21873315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 199
Target Start/End: Complemental strand, 21929217 - 21929176
Alignment:
Q  159 gacacgtgtccgacac-gggacacgtctaatccgaggagtgt 199  Q
    |||||||||||||||| |||||||||||||||| ||||||||    
T  21929217 gacacgtgtccgacaccgggacacgtctaatccaaggagtgt 21929176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 142 - 213
Target Start/End: Complemental strand, 4672096 - 4672024
Alignment:
Q  142 gtgtcggtgtcagacacgacacgtgtccgacacggga-cacgtctaatccgaggagtgtccgtgcttcatagg 213  Q
    ||||||||||| || || | |||||| |||||| ||| || ||||||||| ||||||||| ||||||||||||    
T  4672096 gtgtcggtgtcggatacaaaacgtgttcgacactggaacatgtctaatccaaggagtgtctgtgcttcatagg 4672024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 137 - 212
Target Start/End: Complemental strand, 15724559 - 15724483
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    |||||||||||||||| ||||| ||||||||| |||| |   ||||| |||||||||||||| |  |||||||||||    
T  15724559 gtgtcgtgtcggtgtcggacacaacacgtgtcagacaccaaaacacgcctaatccgaggagtttatgtgcttcatag 15724483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 176 - 204
Target Start/End: Complemental strand, 17210067 - 17210039
Alignment:
Q  176 ggacacgtctaatccgaggagtgtccgtg 204  Q
    |||||||||||||||||||||||||||||    
T  17210067 ggacacgtctaatccgaggagtgtccgtg 17210039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 176 - 212
Target Start/End: Complemental strand, 18844459 - 18844423
Alignment:
Q  176 ggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||||| |||||||||| ||||||||||||||||||    
T  18844459 ggacacgcctaatccgagaagtgtccgtgcttcatag 18844423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 137 - 212
Target Start/End: Complemental strand, 46083996 - 46083920
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    |||||||||| || || ||||||||||||||| ||| | |||||||| || ||  ||||||||||| ||||||||||    
T  46083996 gtgtcgtgtcagtatcggacacgacacgtgtctgacgcggggacacgccttataagaggagtgtccatgcttcatag 46083920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 3e-24; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 137 - 217
Target Start/End: Complemental strand, 41961655 - 41961574
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcataggtata 217  Q
    ||||||||||||| || ||||||||||||||||||||| |||||||| |||||||||| |||||||||||||||||||||||    
T  41961655 gtgtcgtgtcggtatcggacacgacacgtgtccgacactgggacacgcctaatccgagaagtgtccgtgcttcataggtata 41961574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 113 - 215
Target Start/End: Complemental strand, 40993370 - 40993272
Alignment:
Q  113 tcacataattcagtgtaattttatgtgtcgtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcata 211  Q
    |||||||||||||||||||| |||||||||     ||||| |||||||||| |||||||||| |||||||| |||||||||||||||||| |||||||||    
T  40993370 tcacataattcagtgtaattatatgtgtcg-----gtgtcggacacgacacatgtccgacaccgggacacgcctaatccgaggagtgtccatgcttcata 40993276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 117 - 210
Target Start/End: Original strand, 29508472 - 29508567
Alignment:
Q  117 ataattcagtgtaattttatgtgtcg-tgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcat 210  Q
    |||||||||||||||| ||||||||| ||| |||||| ||||||||||  ||||||||| |||||||||||||||| || ||||||||||||||||    
T  29508472 ataattcagtgtaattatatgtgtcgatgttggtgtcggacacgacacacgtccgacaccgggacacgtctaatccaagaagtgtccgtgcttcat 29508567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 55401123 - 55401194
Alignment:
Q  142 gtgtcggtgtcagacacgacacgtgtccgacacgg-gacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||||||||| ||||||||||||||||||||| | |||||| |||||||||||||||||||||||||||||    
T  55401123 gtgtcggtgtcggacacgacacgtgtccgacaccgagacacgcctaatccgaggagtgtccgtgcttcatag 55401194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 113 - 212
Target Start/End: Original strand, 27505270 - 27505370
Alignment:
Q  113 tcacataattcagtgtaattttatgtgtcg-tgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcat 210  Q
    |||||||||| |||||||||  | |||||| ||||| |||| ||||||||||||||||||||| |||||| | |||||||||||||||||||||||||||    
T  27505270 tcacataattaagtgtaattacaagtgtcggtgtcg-tgtctgacacgacacgtgtccgacaccgggacatgcctaatccgaggagtgtccgtgcttcat 27505368  T
Q  211 ag 212  Q
    ||    
T  27505369 ag 27505370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 141 - 210
Target Start/End: Complemental strand, 4987292 - 4987222
Alignment:
Q  141 cgtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcat 210  Q
    |||||||||||  ||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||||    
T  4987292 cgtgtcggtgttggacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtacttcat 4987222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 10955000 - 10955074
Alignment:
Q  142 gtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgagg---agtgtccgtgcttcatag 212  Q
    ||||||||||| ||||||||||||||||||||| |||||||| |||||||||||   ||||||||||||||||||    
T  10955000 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatag 10955074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 137 - 212
Target Start/End: Complemental strand, 34185128 - 34185052
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||||||||  |||| |||| |||| ||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  34185128 gtgtcgtgtccatgtcggacaagacatgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 34185052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 11252024 - 11252095
Alignment:
Q  142 gtgtcggtgtcagacacgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||||||||||||||| ||||||||||| || ||| ||||| ||||||||||||||||| |||||||||||    
T  11252024 gtgtcggtgtcagacacaacacgtgtccggcatcggaacacgcctaatccgaggagtgtctgtgcttcatag 11252095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 20503513 - 20503584
Alignment:
Q  142 gtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||||||||  |||||||||| |||| ||||| |||||||| |||||||||||||||||||||||||||||    
T  20503513 gtgtcggtgttggacacgacacatgtctgacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 20503584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 137 - 214
Target Start/End: Original strand, 14209167 - 14209245
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgcttcataggt 214  Q
    |||||||||||||||| |||||||||||||| ||||| ||||| ||  ||||||| || ||||||||||||||||||||    
T  14209167 gtgtcgtgtcggtgtcggacacgacacgtgtacgacatcgggatacacctaatccaagaagtgtccgtgcttcataggt 14209245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 137 - 214
Target Start/End: Original strand, 28812569 - 28812647
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgcttcataggt 214  Q
    ||||||||| |||||||||||||| || ||||||||| | ||||||| ||||||||||||||||| |||| ||||||||    
T  28812569 gtgtcgtgttggtgtcagacacgatacatgtccgacagcaggacacgcctaatccgaggagtgtctgtgcctcataggt 28812647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 137 - 212
Target Start/End: Complemental strand, 14223864 - 14223788
Alignment:
Q  137 gtgtcgtgtcggtgtcagacac-gacacgtgtccgacacgggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    |||||||||||||||| ||||| ||||||||||||||| |||||||| |||||| ||||||| || |||||| ||||    
T  14223864 gtgtcgtgtcggtgtccgacaccgacacgtgtccgacatgggacacgcctaatctgaggagtttctgtgctttatag 14223788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 160 - 212
Target Start/End: Complemental strand, 27277832 - 27277780
Alignment:
Q  160 acacgtgtccgacacgggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||||||||||||||||||| ||||||||||||||||||  |||||||||||    
T  27277832 acacgtgtccgacacgggacatgtctaatccgaggagtgtatgtgcttcatag 27277780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 113 - 212
Target Start/End: Original strand, 35222962 - 35223057
Alignment:
Q  113 tcacataattcagtgtaattttatgtgtcgtgtcggtgtcagacacgacacgtgtccgacacggg-acacgtctaatccgaggagtgtccgtgcttcata 211  Q
    |||||||||||| ||||||| |||||||||     ||||| |||| |||||||||| |||||||| |||||  | |||||||||||||||||||||||||    
T  35222962 tcacataattcaatgtaattatatgtgtcg-----gtgtcggacatgacacgtgtctgacacggggacacgctttatccgaggagtgtccgtgcttcata 35223056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 13845536 - 13845465
Alignment:
Q  142 gtgtcggtgtcagacacgacacgtgtccgacacgg-gacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||||||||| ||||||| ||||||| ||||||| |||||| || |||| |||||||||||||||||||||    
T  13845536 gtgtcggtgtcggacacgagacgtgtctgacacggagacacgccttatccaaggagtgtccgtgcttcatag 13845465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 137 - 211
Target Start/End: Original strand, 14216946 - 14217021
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcata 211  Q
    |||||||||  ||||| |||||||||||||| |||||| |||||||  |||||||||| |||||||||||||||||    
T  14216946 gtgtcgtgttagtgtcggacacgacacgtgtacgacactgggacacacctaatccgagaagtgtccgtgcttcata 14217021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 137 - 211
Target Start/End: Original strand, 14223075 - 14223150
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcata 211  Q
    |||||||||  ||||| |||||||||||||| |||||| |||||||  |||||||||| |||||||||||||||||    
T  14223075 gtgtcgtgttagtgtcggacacgacacgtgtacgacactgggacacacctaatccgagaagtgtccgtgcttcata 14223150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 137 - 212
Target Start/End: Original strand, 16789066 - 16789141
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgacacgggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    |||||||||| ||||| |||| ||||| ||||| |||||||||||  |||||  ||||||||||||||||||||||    
T  16789066 gtgtcgtgtcagtgtcggacatgacacatgtccaacacgggacacacctaatttgaggagtgtccgtgcttcatag 16789141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 115 - 212
Target Start/End: Original strand, 21211314 - 21211413
Alignment:
Q  115 acataattcagtgtaattttatgtgtcgtgtcggtgtcagacac-gacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||| |||||||||||| |  |||||||||||||||  ||||| ||| |||||||||||| |||||||  ||||||||||||||||  |||||||||||    
T  21211314 acatagttcagtgtaattatgggtgtcgtgtcggtgttcgacaccgacgcgtgtccgacactgggacactcctaatccgaggagtgtttgtgcttcatag 21211413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 158 - 211
Target Start/End: Original strand, 15864897 - 15864950
Alignment:
Q  158 cgacacgtgtccgacacgggacacgtctaatccgaggagtgtccgtgcttcata 211  Q
    ||||||||||| ||||||||||||| ||||||| | ||||||||||||||||||    
T  15864897 cgacacgtgtctgacacgggacacgcctaatccaaagagtgtccgtgcttcata 15864950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 155 - 211
Target Start/End: Complemental strand, 16000008 - 15999951
Alignment:
Q  155 acacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcata 211  Q
    |||||||||||||||||||| |||||||| ||||||| |||||||||||||| |||||    
T  16000008 acacgacacgtgtccgacaccgggacacgcctaatccaaggagtgtccgtgcatcata 15999951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 154 - 210
Target Start/End: Original strand, 28918063 - 28918120
Alignment:
Q  154 gacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcat 210  Q
    ||||||||||||||||||||| |||||||| ||||||| |||||||||| ||||||||    
T  28918063 gacacgacacgtgtccgacactgggacacgcctaatccaaggagtgtccctgcttcat 28918120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 174 - 211
Target Start/End: Original strand, 34910398 - 34910435
Alignment:
Q  174 cgggacacgtctaatccgaggagtgtccgtgcttcata 211  Q
    ||||||||||||||||||||||||||||||||||||||    
T  34910398 cgggacacgtctaatccgaggagtgtccgtgcttcata 34910435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 162 - 214
Target Start/End: Original strand, 40052380 - 40052433
Alignment:
Q  162 acgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcataggt 214  Q
    ||||||||||||| |||||||| |||||||||||||||| ||||||||||||||    
T  40052380 acgtgtccgacaccgggacacgcctaatccgaggagtgttcgtgcttcataggt 40052433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 143 - 218
Target Start/End: Original strand, 8842378 - 8842454
Alignment:
Q  143 tgtcggtgtcagacacgacacgtgtccgacacgg-gacacgtctaatccgaggagtgtccgtgcttcataggtatac 218  Q
    ||||||||||||||||||||| |||  || |  | |||||| ||||||||||||||||||||||||||||| |||||    
T  8842378 tgtcggtgtcagacacgacacatgttagatattgagacacgcctaatccgaggagtgtccgtgcttcatagatatac 8842454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 113 - 165
Target Start/End: Complemental strand, 34307815 - 34307763
Alignment:
Q  113 tcacataattcagtgtaattttatgtgtcgtgtcggtgtcagacacgacacgt 165  Q
    ||||||| |||||||||||| || |||||||||||||||| ||||||||||||    
T  34307815 tcacatatttcagtgtaattataagtgtcgtgtcggtgtcggacacgacacgt 34307763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 115 - 212
Target Start/End: Original strand, 25074815 - 25074914
Alignment:
Q  115 acataattcagtgtaattttatgtgtcgtgtcggtgtcagacacga-cacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    |||||||| ||||||||  || | || ||||||||||| ||||| | | |||||||||||| |||||||  |||||||||||||||| ||||||||||||    
T  25074815 acataattgagtgtaatcataggcgttgtgtcggtgtctgacaccaacgcgtgtccgacactgggacacacctaatccgaggagtgttcgtgcttcatag 25074914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 211
Target Start/End: Complemental strand, 8789585 - 8789489
Alignment:
Q  113 tcacataattcagtgtaattttatgtgtcgtgtcggtgtcagacacgacacg--tgtccgacacgg-gacacgtctaatccgaggagtgtccgtgcttca 209  Q
    ||||||||||| |||||||| |||||||||     ||||| ||||||||||   |||| ||||| | |||||| ||||||||||||||||||||||||||    
T  8789585 tcacataattccgtgtaattatatgtgtcg-----gtgtcggacacgacacacatgtcggacaccgagacacgcctaatccgaggagtgtccgtgcttca 8789491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 163 - 212
Target Start/End: Original strand, 11610578 - 11610628
Alignment:
Q  163 cgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||||||||| ||||||||| |||||| ||||||||||||||||||||||    
T  11610578 cgtgtccgacatcgggacacgcctaatctgaggagtgtccgtgcttcatag 11610628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 137 - 210
Target Start/End: Original strand, 13806290 - 13806363
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccga-cacgggacacgtctaatccgaggagtgtccgtgcttcat 210  Q
    ||||||||||||||| |||||| |||| || |||| | ||||||||| ||||||||| |||||||||||||||||    
T  13806290 gtgtcgtgtcggtgttagacacaacacatgaccgaccccgggacacgcctaatccga-gagtgtccgtgcttcat 13806363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 143 - 212
Target Start/End: Original strand, 18426998 - 18427068
Alignment:
Q  143 tgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    |||||||||| || |||||||||||||| ||| |||||||  |||||| |||||||||||||| |||||||    
T  18426998 tgtcggtgtcggatacgacacgtgtccggcaccgggacacacctaatctgaggagtgtccgtgtttcatag 18427068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 145 - 214
Target Start/End: Complemental strand, 26492213 - 26492143
Alignment:
Q  145 tcggtgtcagacacgacacgtgtccgacacgg-gacacgtctaatccgaggagtgtccgtgcttcataggt 214  Q
    |||||||| |||||||||| |||| |||||   ||||||||||||||||||| |||||| |||||||||||    
T  26492213 tcggtgtcggacacgacacatgtctgacaccaagacacgtctaatccgaggaatgtccgcgcttcataggt 26492143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 113 - 205
Target Start/End: Original strand, 3631708 - 3631796
Alignment:
Q  113 tcacataattcagtgtaattttatgtgtcgtgtcggtgtcagacacgacacgtgtccgacacg-ggacacgtctaatccgaggagtgtccgtgc 205  Q
    |||||||||||||||||||| |||||| |      ||||| |||||||||| ||||||||||  ||||||| ||| ||||||||||||||||||    
T  3631708 tcacataattcagtgtaattatatgtgcca-----gtgtcggacacgacacatgtccgacaccaggacacgcctagtccgaggagtgtccgtgc 3631796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 115 - 206
Target Start/End: Complemental strand, 12704690 - 12704597
Alignment:
Q  115 acataattcagtgtaattttatgtgtcgtgtcggtgtcagacacga-cacgtgtccgacacggga-cacgtctaatccgaggagtgtccgtgct 206  Q
    |||||||||| ||||||  || |||||||||||||||| ||||| | | | ||||||||||  || |||||||||||| |||||||||||||||    
T  12704690 acataattcaatgtaatcataggtgtcgtgtcggtgtcggacaccaacgcatgtccgacaccagaacacgtctaatcctaggagtgtccgtgct 12704597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 140 - 212
Target Start/End: Original strand, 25064964 - 25065037
Alignment:
Q  140 tcgtgtcggtgtcagacacgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    |||||| |||||| ||||||||||||||| |||| |||||||||  | ||||||||||||| |||||| |||||    
T  25064964 tcgtgttggtgtcggacacgacacgtgtctgacaccgggacacggtttatccgaggagtgttcgtgctccatag 25065037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 154 - 214
Target Start/End: Complemental strand, 49651775 - 49651714
Alignment:
Q  154 gacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcataggt 214  Q
    |||||||||| | |||||||| |||||||  |||||||||| ||||||||||||||||||||    
T  49651775 gacacgacacatatccgacaccgggacacacctaatccgagaagtgtccgtgcttcataggt 49651714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 176 - 212
Target Start/End: Complemental strand, 4990948 - 4990912
Alignment:
Q  176 ggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||||| |||||||||||||||||||||||||||||    
T  4990948 ggacacgcctaatccgaggagtgtccgtgcttcatag 4990912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 142 - 213
Target Start/End: Original strand, 7171549 - 7171621
Alignment:
Q  142 gtgtcggtgtcagacacgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgcttcatagg 213  Q
    |||| |||||| |||||||||||||||||||| || |||||| ||||||| ||||||||   |||||||||||    
T  7171549 gtgttggtgtcggacacgacacgtgtccgacaccgcgacacgcctaatccaaggagtgtatatgcttcatagg 7171621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 137 - 212
Target Start/End: Complemental strand, 8039840 - 8039764
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    |||||||||||||||| |||| || || ||||||||| |||||||||  |||||||| |||| || |||||||||||    
T  8039840 gtgtcgtgtcggtgtcggacatgagacatgtccgacaccgggacacgcttaatccgaagagtatctgtgcttcatag 8039764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 137 - 188
Target Start/End: Original strand, 14832153 - 14832205
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgaca-cgggacacgtctaat 188  Q
    ||||||||||||| || |||||||||||||||||||| ||||||||| |||||    
T  14832153 gtgtcgtgtcggtatcggacacgacacgtgtccgacaccgggacacgcctaat 14832205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 174 - 214
Target Start/End: Original strand, 14979230 - 14979270
Alignment:
Q  174 cgggacacgtctaatccgaggagtgtccgtgcttcataggt 214  Q
    ||||||||| |||| ||||||||||||||||||||||||||    
T  14979230 cgggacacgcctaacccgaggagtgtccgtgcttcataggt 14979270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 137 - 212
Target Start/End: Complemental strand, 15796299 - 15796223
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgacacggga-cacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||||||| |||||| ||||| |||||||||| |||| ||| |||| ||||||| | |||||| ||||||||||||    
T  15796299 gtgtcgtgtaggtgtcggacacaacacgtgtccaacaccggaacacgcctaatccaaagagtgttcgtgcttcatag 15796223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 137 - 212
Target Start/End: Complemental strand, 17005624 - 17005548
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgacacg-ggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    |||| |||| |||||||||||  ||||||||| |||||  |||||| |||||||||||||||||  |||||||||||    
T  17005624 gtgttgtgttggtgtcagacataacacgtgtctgacaccaggacacctctaatccgaggagtgtttgtgcttcatag 17005548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 5441033 - 5440967
Alignment:
Q  148 gtgtcagacacgacacgtgtccgacacgg-gacacgtc-taatccgaggagtgtccgtgcttcatag 212  Q
    |||||||||||||||| ||||| |||| | |||||| | |||| |||||||||||||||||||||||    
T  5441033 gtgtcagacacgacacatgtccaacaccgagacacggcctaattcgaggagtgtccgtgcttcatag 5440967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 159 - 212
Target Start/End: Complemental strand, 8101946 - 8101892
Alignment:
Q  159 gacacgtgtccgacacggg-acacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    |||||||||| ||||| || |||||||||||| ||||||||| ||||||||||||    
T  8101946 gacacgtgtcggacactggtacacgtctaatctgaggagtgttcgtgcttcatag 8101892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 115 - 210
Target Start/End: Complemental strand, 24205074 - 24204983
Alignment:
Q  115 acataattcagtgtaattttatgtgtcgtgtcggtgtcagacac-gacacgtgtccgacacg-ggacacgtctaatccgaggagtgtccgtgcttcat 210  Q
    ||||||| |||||||||| || ||||||||||||      |||| ||| ||||||||||||  ||||||| ||||| |||||||||||||||||||||    
T  24205074 acataatacagtgtaattataagtgtcgtgtcgg------acactgacgcgtgtccgacaccaggacacgcctaattcgaggagtgtccgtgcttcat 24204983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 142 - 210
Target Start/End: Original strand, 25775557 - 25775624
Alignment:
Q  142 gtgtcggtgtcagacacgacacgtgtccgacacg-ggacacgtctaatccgaggagtgtccgtgcttcat 210  Q
    ||||||||||| |||||| |  |||||||||||  ||||||| |||||||||||||||| ||||||||||    
T  25775557 gtgtcggtgtcggacacgtc--gtgtccgacaccaggacacgcctaatccgaggagtgttcgtgcttcat 25775624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 142 - 214
Target Start/End: Original strand, 52369834 - 52369908
Alignment:
Q  142 gtgtcggtgtcagacac-gacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcataggt 214  Q
    |||||||| || ||||| ||| ||||||| |||| |||||||  ||| |||||||||||||||||||||||||||    
T  52369834 gtgtcggtatcggacaccgacgcgtgtccaacaccgggacacacctattccgaggagtgtccgtgcttcataggt 52369908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 114 - 212
Target Start/End: Complemental strand, 2408688 - 2408590
Alignment:
Q  114 cacataattcagtgtaattttatgtgtcgtgtcggtgtcagacac-gacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcata 211  Q
    ||||||||||| |||||||  |||| | ||||||| ||||||||| ||  ||||| |||||| |||||||| ||||||  |||||| |||||||||||||    
T  2408688 cacataattcaatgtaatt--atgttttgtgtcggagtcagacactgatgcgtgttcgacaccgggacacgcctaatctaaggagtctccgtgcttcata 2408591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 164 - 212
Target Start/End: Complemental strand, 4466589 - 4466540
Alignment:
Q  164 gtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||||||||| |||||||| || || |||||||||||||||||||||||    
T  4466589 gtgtccgacactgggacacggcttattcgaggagtgtccgtgcttcatag 4466540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 212
Target Start/End: Original strand, 8903506 - 8903554
Alignment:
Q  163 cgtgtccgacacgggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    |||||||||| ||||||||  |||||||||||||||| ||||||||||||    
T  8903506 cgtgtccgac-cgggacacacctaatccgaggagtgttcgtgcttcatag 8903554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 152
Target Start/End: Complemental strand, 41319343 - 41319306
Alignment:
Q  115 acataattcagtgtaattttatgtgtcgtgtcggtgtc 152  Q
    |||||||||| ||||||| |||||||||||||||||||    
T  41319343 acataattcaatgtaattgtatgtgtcgtgtcggtgtc 41319306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 137 - 192
Target Start/End: Complemental strand, 2620060 - 2620004
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgaca-cgggacacgtctaatccga 192  Q
    |||||||| |||||| ||||||||||| |||||| || ||||||||| |||||||||    
T  2620060 gtgtcgtggcggtgttagacacgacacatgtccggcatcgggacacgcctaatccga 2620004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 137 - 212
Target Start/End: Original strand, 9800094 - 9800170
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgacacg-ggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||||||||||| ||||| | || ||||||| |||||  ||||||| |||||| |||| || ||||||||||||||    
T  9800094 gtgtcgtgtcggtatcagagatgatacgtgtcggacacctggacacgcctaatcggaggcgtttccgtgcttcatag 9800170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 137 - 208
Target Start/End: Original strand, 11665998 - 11666070
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgcttc 208  Q
    ||||||||| | ||| |||||||||||||||| || | ||| ||||| ||||| | |||||||||||||||||    
T  11665998 gtgtcgtgttgatgttagacacgacacgtgtctgatatcggaacacgcctaattcaaggagtgtccgtgcttc 11666070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 184 - 212
Target Start/End: Original strand, 21861666 - 21861694
Alignment:
Q  184 ctaatccgaggagtgtccgtgcttcatag 212  Q
    |||||||||||||||||||||||||||||    
T  21861666 ctaatccgaggagtgtccgtgcttcatag 21861694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 165 - 208
Target Start/End: Original strand, 33359826 - 33359870
Alignment:
Q  165 tgtccgaca-cgggacacgtctaatccgaggagtgtccgtgcttc 208  Q
    ||||||||| |||||||||||||||  ||||||||||||||||||    
T  33359826 tgtccgacatcgggacacgtctaattggaggagtgtccgtgcttc 33359870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 5e-23; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 598256 - 598327
Alignment:
Q  142 gtgtcggtgtcagacacgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    |||||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||||||||    
T  598256 gtgtcggtgtcagacacgacacgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttcatag 598327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 113 - 214
Target Start/End: Complemental strand, 5409871 - 5409769
Alignment:
Q  113 tcacataattcagtgtaattttatgtgtcg-tgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcat 210  Q
    ||||||||||||||| ||||  | |||||| ||||| |||| ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  5409871 tcacataattcagtgcaattacaagtgtcggtgtcg-tgtcggacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcat 5409773  T
Q  211 aggt 214  Q
    ||||    
T  5409772 aggt 5409769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 142 - 213
Target Start/End: Original strand, 15680857 - 15680929
Alignment:
Q  142 gtgtcggtgtcagacacgacacgtgtccgacacgg-gacacgtctaatccgaggagtgtccgtgcttcatagg 213  Q
    ||||||||||| ||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||||    
T  15680857 gtgtcggtgtcggacacgacacgtgtccgacaccgagacacgtctaattcgaggagtgtccgtgcttcatagg 15680929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 137 - 212
Target Start/End: Original strand, 24339696 - 24339772
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    |||||||||||||||| |||||||||||| |||||||| |||||||| ||||||||||||||| |||||||||||||    
T  24339696 gtgtcgtgtcggtgtcggacacgacacgtatccgacaccgggacacgcctaatccgaggagtgcccgtgcttcatag 24339772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 43027469 - 43027404
Alignment:
Q  148 gtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||||||    
T  43027469 gtgtcagacacgacacgtgtccgacaccgggacacgcctaatccgatgagtgtccgtgcttcatag 43027404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 113 - 214
Target Start/End: Original strand, 9778524 - 9778626
Alignment:
Q  113 tcacataattcagtgtaattttatgtgtcg-tgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcat 210  Q
    |||||||||||||| |||||  | |||||| ||||| |||| ||||| ||||||||||||||| |||||||| ||||||| |||||||||||||||||||    
T  9778524 tcacataattcagtataattacaagtgtcggtgtcg-tgtcggacacaacacgtgtccgacaccgggacacgcctaatccaaggagtgtccgtgcttcat 9778622  T
Q  211 aggt 214  Q
    ||||    
T  9778623 aggt 9778626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 21864856 - 21864927
Alignment:
Q  142 gtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    |||||| |||| ||||||||||||||||||||| |||||||||||||| ||||||||||| |||||||||||    
T  21864856 gtgtcgctgtcggacacgacacgtgtccgacaccgggacacgtctaattcgaggagtgtctgtgcttcatag 21864927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 113 - 212
Target Start/End: Complemental strand, 32094055 - 32093954
Alignment:
Q  113 tcacataattcagtgtaattttatgtgtc-gtgtcggtgtcagacacgacacgtgtccgacac--gggacacgtctaatccgaggagtgtccgtgcttca 209  Q
    ||||||||||||||||||||  |  |||| ||||| ||||| |||||||||||||||||||||  |||||||| |||||||||||||||| |||||||||    
T  32094055 tcacataattcagtgtaattacaaatgtcggtgtc-gtgtcggacacgacacgtgtccgacaccggggacacgcctaatccgaggagtgttcgtgcttca 32093957  T
Q  210 tag 212  Q
    |||    
T  32093956 tag 32093954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 125 - 212
Target Start/End: Original strand, 1433490 - 1433578
Alignment:
Q  125 gtgtaattttatgtgtcg-tgtcggtgtcagacacgacacgtgtccgacacg-ggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    |||||||| ||||||||| ||||| |||| |||| |||| |||||||||||  |||||||||||||||||||||||||||||||||||||    
T  1433490 gtgtaattatatgtgtcggtgtcg-tgtcggacaagacatgtgtccgacaccaggacacgtctaatccgaggagtgtccgtgcttcatag 1433578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 21880200 - 21880271
Alignment:
Q  142 gtgtcggtgtcagacacgacacgtgtccgacacg-ggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||||||||| |||||||||| ||||||||||  ||||||| |||||||||| ||||||||||||||||||    
T  21880200 gtgtcggtgtcggacacgacacatgtccgacaccaggacacgcctaatccgagaagtgtccgtgcttcatag 21880271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 155 - 212
Target Start/End: Complemental strand, 29763187 - 29763129
Alignment:
Q  155 acacgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||||||||||||||||| | ||||||| |||||||||||||||||||||||||||||    
T  29763187 acacgacacgtgtccgacatcaggacacgcctaatccgaggagtgtccgtgcttcatag 29763129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 32287474 - 32287404
Alignment:
Q  142 gtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcata 211  Q
    ||||||||||| |||| |||| ||||||||||| |||||||  ||||||||||||||||||||||||||||    
T  32287474 gtgtcggtgtcggacatgacaagtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 32287404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 18035875 - 18035806
Alignment:
Q  142 gtgtcggtgtcagacacgacacgtgtccgacacgggacacgtctaatccgaggagtgtccgtgcttcata 211  Q
    ||||| |||| ||| | ||||| |||| ||||||| ||||||||||||||||||||||||||||||||||    
T  18035875 gtgtcagtgtgagataggacacatgtctgacacggaacacgtctaatccgaggagtgtccgtgcttcata 18035806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 137 - 212
Target Start/End: Original strand, 2334304 - 2334379
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgacacggga-cacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||||||||| |||| |||||||||| |||||||||| | | |||||||||||||||||||||||||| |||||||    
T  2334304 gtgtcgtgtcg-tgtcggacacgacacatgtccgacactgaaacacgtctaatccgaggagtgtccgtgtttcatag 2334379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 115 - 212
Target Start/End: Complemental strand, 7133311 - 7133212
Alignment:
Q  115 acataattcagtgtaattttatgtgtcgtgtcggtgtcagacac-gacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    |||||||||||||||||  || |||  ||||||||||| ||||| ||| |||||||||||| |||||||  |||||| |||||| |||||||||||||||    
T  7133311 acataattcagtgtaatcataggtggtgtgtcggtgtcggacaccgacgcgtgtccgacactgggacacacctaatctgaggagcgtccgtgcttcatag 7133212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 140 - 210
Target Start/End: Complemental strand, 26033463 - 26033392
Alignment:
Q  140 tcgtgtcggtgtcagacacgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgcttcat 210  Q
    |||||||||||||||||| ||||||||||||| | || |||||  ||||||||||||||||||||| |||||    
T  26033463 tcgtgtcggtgtcagacatgacacgtgtccgataccgcgacacacctaatccgaggagtgtccgtgtttcat 26033392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 137 - 214
Target Start/End: Original strand, 7438760 - 7438838
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgacacg-ggacacgtctaatccgaggagtgtccgtgcttcataggt 214  Q
    ||||| ||||||||||| ||||||||| ||| ||||||  ||||||| ||||| | |||||||||||||||||||||||    
T  7438760 gtgtcatgtcggtgtcaaacacgacacatgtgcgacactaggacacgcctaattcaaggagtgtccgtgcttcataggt 7438838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 115 - 207
Target Start/End: Original strand, 13770717 - 13770810
Alignment:
Q  115 acataattcagtgtaattttatgtgtcgt-gtcggtgtcagacacgacacgtgtccgacacggga-cacgtctaatccgaggagtgtccgtgctt 207  Q
    ||||||||||||||||||  | ||||||| |||| |||| ||||| ||||||||||||||| ||| |||| ||||||||| ||||||||||||||    
T  13770717 acataattcagtgtaattacaagtgtcgttgtcg-tgtcggacacaacacgtgtccgacaccggaacacgcctaatccgaagagtgtccgtgctt 13770810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 22484073 - 22484143
Alignment:
Q  142 gtgtcggtgtcagacacgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgcttcata 211  Q
    |||||||||||||||| ||||| ||||||||| || |||| |||| ||||||| |||||||||||||||||    
T  22484073 gtgtcggtgtcagacatgacacatgtccgacatcgagacatgtctgatccgagaagtgtccgtgcttcata 22484143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 113 - 211
Target Start/End: Original strand, 32308144 - 32308249
Alignment:
Q  113 tcacataattcagtgtaattttatgtgt------cgtgtcggtgtcagacacgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgc 205  Q
    |||||||||||||||||||| |||||||      |||||||||||  |||||||||| ||||||||| || |||||  |||||||||||||||| | |||    
T  32308144 tcacataattcagtgtaattgtatgtgtcagtgtcgtgtcggtgttggacacgacacatgtccgacaccgagacacagctaatccgaggagtgttcatgc 32308243  T
Q  206 ttcata 211  Q
    ||||||    
T  32308244 ttcata 32308249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 163 - 212
Target Start/End: Complemental strand, 40131989 - 40131939
Alignment:
Q  163 cgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    |||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  40131989 cgtgtccgacacagggacacgtctaatccgaggagtgtctgtgcttcatag 40131939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 142 - 214
Target Start/End: Original strand, 33994260 - 33994333
Alignment:
Q  142 gtgtcggtgtcagacacgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgcttcataggt 214  Q
    |||||||||||||||||||||| ||||| ||| || |||||| ||||||| |||||||| |||| |||||||||    
T  33994260 gtgtcggtgtcagacacgacacatgtccaacaccgagacacgcctaatccaaggagtgttcgtgtttcataggt 33994333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 126 - 209
Target Start/End: Complemental strand, 2533844 - 2533761
Alignment:
Q  126 tgtaattttatgtgtcgtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttca 209  Q
    ||||||| |||||||||||||| ||| |||||| |||||| |||||| | ||||||||  ||||||||||||||| |||||||||    
T  2533844 tgtaattatatgtgtcgtgtcg-tgtaagacacaacacgtatccgacgccgggacacgcgtaatccgaggagtgttcgtgcttca 2533761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 168 - 212
Target Start/End: Complemental strand, 29812642 - 29812598
Alignment:
Q  168 ccgacacgggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||    
T  29812642 ccgacacgggacacgcctaatccgagaagtgtccgtgcttcatag 29812598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 113 - 211
Target Start/End: Original strand, 20549815 - 20549909
Alignment:
Q  113 tcacataattcagtgtaattttatgtgtcgtgtcggtgtcagacacgacacgtgtccgacacgg-gacacgtctaatccgaggagtgtccgtgcttcata 211  Q
    |||| ||||||||||||||| |||||||||     ||||| ||||| |||| |||||||||  | |||||| ||||||||||||||| ||||||||||||    
T  20549815 tcacgtaattcagtgtaattatatgtgtcg-----gtgtcggacacaacacatgtccgacaatgagacacgcctaatccgaggagtgcccgtgcttcata 20549909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 138 - 211
Target Start/End: Complemental strand, 11665444 - 11665370
Alignment:
Q  138 tgtcgtgtcggtgtcagacacgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgcttcata 211  Q
    |||| ||||||||||  ||||||||||||||||||| ||  |||| |||||| |||||| |||||||||||||||    
T  11665444 tgtcatgtcggtgtcgaacacgacacgtgtccgacaccgaaacacatctaatacgaggaatgtccgtgcttcata 11665370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 176 - 214
Target Start/End: Original strand, 35862034 - 35862072
Alignment:
Q  176 ggacacgtctaatccgaggagtgtccgtgcttcataggt 214  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  35862034 ggacacgcctaatccgaggagtgtccgtgcttcataggt 35862072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 164 - 212
Target Start/End: Original strand, 6490786 - 6490835
Alignment:
Q  164 gtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||||||||| ||||||||  ||||||||||||||||||||||||||||    
T  6490786 gtgtccgacaccgggacacgcttaatccgaggagtgtccgtgcttcatag 6490835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 155 - 211
Target Start/End: Complemental strand, 20545242 - 20545185
Alignment:
Q  155 acacgacacgtgtccgacacggg-acacgtctaatccgaggagtgtccgtgcttcata 211  Q
    ||||||||| ||||||||||||| |||||| |||| ||||||||||| ||||||||||    
T  20545242 acacgacacatgtccgacacggggacacgtttaattcgaggagtgtctgtgcttcata 20545185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 161 - 212
Target Start/End: Original strand, 14729770 - 14729822
Alignment:
Q  161 cacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    |||||||||||||| ||||||||  ||||||||||||||||||| ||||||||    
T  14729770 cacgtgtccgacaccgggacacgcttaatccgaggagtgtccgtacttcatag 14729822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 212
Target Start/End: Complemental strand, 18213068 - 18212973
Alignment:
Q  113 tcacataattcagtgtaattttatgtgtcgtgtcggtgtcagacacgacacgtgtccgacacggg-acacgtctaatccgaggagtgtccgtgcttcata 211  Q
    |||||||||| ||||||||| |||||||||     ||||| |||||||| | | || |||||||| ||||| || |||||||||||||| ||||||||||    
T  18213068 tcacataatttagtgtaattatatgtgtcg-----gtgtcggacacgacccctttctgacacggggacacgccttatccgaggagtgtctgtgcttcata 18212974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 137 - 212
Target Start/End: Original strand, 25822709 - 25822785
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||||| ||||| || ||||||||||||||| |||| ||||||| | ||||||  ||||||||||||| |||||||    
T  25822709 gtgtcgtatcggtatcggacacgacacgtgtctgacatcgggacatgcctaatctaaggagtgtccgtgtttcatag 25822785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 154 - 212
Target Start/End: Original strand, 17852060 - 17852119
Alignment:
Q  154 gacacgacacgtgtccgacacgg-gacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    |||| |||||||||||||||| | |||||  ||||| |||||||||||||||||||||||    
T  17852060 gacatgacacgtgtccgacaccgagacacacctaattcgaggagtgtccgtgcttcatag 17852119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 139 - 170
Target Start/End: Complemental strand, 26329385 - 26329354
Alignment:
Q  139 gtcgtgtcggtgtcagacacgacacgtgtccg 170  Q
    ||||||||||||||||||||||||||||||||    
T  26329385 gtcgtgtcggtgtcagacacgacacgtgtccg 26329354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 145 - 213
Target Start/End: Original strand, 1401076 - 1401143
Alignment:
Q  145 tcggtgtcagacacgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgcttcatagg 213  Q
    |||||||| |||||||||  ||||||||| ||||||||  |||||| ||||||||||| |||||||||||    
T  1401076 tcggtgtccgacacgaca--tgtccgacatcgggacacacctaatctgaggagtgtccatgcttcatagg 1401143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 158 - 212
Target Start/End: Original strand, 23751964 - 23752018
Alignment:
Q  158 cgacacgtgtccgacacgggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    |||| |||||| ||||||||||||| |||||||||  |||||| |||||||||||    
T  23751964 cgacgcgtgtcagacacgggacacgcctaatccgataagtgtctgtgcttcatag 23752018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 212
Target Start/End: Complemental strand, 28973919 - 28973881
Alignment:
Q  174 cgggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||||||| ||||||||||| |||||||||||||||||    
T  28973919 cgggacacgcctaatccgaggtgtgtccgtgcttcatag 28973881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 178 - 212
Target Start/End: Original strand, 30813882 - 30813916
Alignment:
Q  178 acacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||| |||||||||||||||||||||||||||||    
T  30813882 acacgcctaatccgaggagtgtccgtgcttcatag 30813916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 159 - 208
Target Start/End: Complemental strand, 40287356 - 40287306
Alignment:
Q  159 gacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttc 208  Q
    ||||| |||||||||| |||||| | |||||||||||||||||||||||||    
T  40287356 gacacatgtccgacaccgggacatgcctaatccgaggagtgtccgtgcttc 40287306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 3991395 - 3991432
Alignment:
Q  175 gggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    |||||||| ||||||||||||||||||| |||||||||    
T  3991395 gggacacgcctaatccgaggagtgtccgggcttcatag 3991432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 199
Target Start/End: Complemental strand, 7973129 - 7973076
Alignment:
Q  147 ggtgtcagacacgacacgtgtccgaca-cgggacacgtctaatccgaggagtgt 199  Q
    ||||| ||||||||||| ||||||||| |||||||||||||||  |||||||||    
T  7973129 ggtgtgagacacgacacatgtccgacatcgggacacgtctaatatgaggagtgt 7973076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 207
Target Start/End: Complemental strand, 11722118 - 11722073
Alignment:
Q  163 cgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgctt 207  Q
    |||||||||||| |||||||||  ||||||||||||||||||||||    
T  11722118 cgtgtccgacacagggacacgttgaatccgaggagtgtccgtgctt 11722073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 148
Target Start/End: Original strand, 12278861 - 12278894
Alignment:
Q  115 acataattcagtgtaattttatgtgtcgtgtcgg 148  Q
    |||||||||||||||||| |||||||||||||||    
T  12278861 acataattcagtgtaattatatgtgtcgtgtcgg 12278894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 115 - 174
Target Start/End: Original strand, 5938498 - 5938558
Alignment:
Q  115 acataattcagtgtaattttatgtgtcgtgtcggtgtcagaca-cgacacgtgtccgacac 174  Q
    |||||||||||| ||||| || |||| |||||||||||||||| |||  ||||||||||||    
T  5938498 acataattcagtataattataggtgttgtgtcggtgtcagacaccgatgcgtgtccgacac 5938558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 184 - 212
Target Start/End: Original strand, 19213884 - 19213912
Alignment:
Q  184 ctaatccgaggagtgtccgtgcttcatag 212  Q
    |||||||||||||||||||||||||||||    
T  19213884 ctaatccgaggagtgtccgtgcttcatag 19213912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 142 - 213
Target Start/End: Original strand, 26733352 - 26733424
Alignment:
Q  142 gtgtcggtgtcagacacgacacgtgtccgacacggg-acacgtctaatccgaggagtgtccgtgcttcatagg 213  Q
    ||||||||||| |||||||| | ||||||| ||||| ||||| ||||||||||| ||||| ||| ||| ||||    
T  26733352 gtgtcggtgtcggacacgacgcatgtccgatacgggaacacgcctaatccgaggggtgtctgtgtttcgtagg 26733424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 137 - 208
Target Start/End: Complemental strand, 27229316 - 27229244
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttc 208  Q
    ||||||||||  |||||||||||| |||||| ||||||  ||||||| ||||| |||||| ||||| ||||||    
T  27229316 gtgtcgtgtcactgtcagacacgatacgtgttcgacactaggacacgcctaattcgaggaatgtccatgcttc 27229244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 137 - 214
Target Start/End: Original strand, 71779 - 71857
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcataggt 214  Q
    |||||||||||||||| ||||| ||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||    
T  71779 gtgtcgtgtcggtgtcggacacaacacgtgtccgacaccgggacacgactaatccgaggagtgtcggtgcttcataggt 71857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 55; Significance: 2e-22; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 137 - 214
Target Start/End: Original strand, 37419797 - 37419875
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcataggt 214  Q
    |||||||||||||||| |||||||  |||||||||||| |||||||| |||||||||||||||||||||||||||||||    
T  37419797 gtgtcgtgtcggtgtcggacacgatgcgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcataggt 37419875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 137 - 212
Target Start/End: Original strand, 26769565 - 26769641
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||| ||||||| || ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  26769565 gtgtcatgtcggtatcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtgtccgtgcttcatag 26769641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 137 - 212
Target Start/End: Original strand, 35056922 - 35056998
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgacacgg-gacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    |||||||||||||||| |||||||||||||||||||||||  ||||| |||||| ||||||||||||||||||||||    
T  35056922 gtgtcgtgtcggtgtcggacacgacacgtgtccgacacggaaacacgcctaatctgaggagtgtccgtgcttcatag 35056998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 18841024 - 18840953
Alignment:
Q  142 gtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    |||||||||||||||||||||| |||||||||| |||||||  |||||||||||||||||||||||||||||    
T  18841024 gtgtcggtgtcagacacgacacatgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcatag 18840953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 142 - 210
Target Start/End: Complemental strand, 2438730 - 2438661
Alignment:
Q  142 gtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcat 210  Q
    ||||||||||| |||||||||| |||||||||| |||||||| |||||||||||||||||||||||||||    
T  2438730 gtgtcggtgtcggacacgacacatgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcat 2438661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 28596517 - 28596587
Alignment:
Q  142 gtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcata 211  Q
    ||||||||||| |||||||||||||||||||||  ||||||  ||||||||||||||||||||||||||||    
T  28596517 gtgtcggtgtcggacacgacacgtgtccgacactcggacactcctaatccgaggagtgtccgtgcttcata 28596587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 113 - 213
Target Start/End: Original strand, 28677933 - 28678034
Alignment:
Q  113 tcacataattcagtgtaattttatgtgtcgtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcata 211  Q
    |||||||||||||||||||| |||||   |||||||||||| |||||||| ||||||||||| |||||||| || | | ||||||||||  |||||||||    
T  28677933 tcacataattcagtgtaattatatgttcggtgtcggtgtcaaacacgacaagtgtccgacacagggacacggctgaccggaggagtgtctatgcttcata 28678032  T
Q  212 gg 213  Q
    ||    
T  28678033 gg 28678034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 42511387 - 42511322
Alignment:
Q  148 gtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||| ||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  42511387 gtgtcggacacaacacgtgtccgacacagggacacggctaatccgaggagtgtccgtgcttcatag 42511322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 137 - 212
Target Start/End: Complemental strand, 21782820 - 21782744
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    |||| |||| |||||||| |||||||||||||| |||| ||||||||||||||| | ||||||||||||||||||||    
T  21782820 gtgttgtgttggtgtcaggcacgacacgtgtccaacaccgggacacgtctaatctgtggagtgtccgtgcttcatag 21782744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 24009343 - 24009414
Alignment:
Q  142 gtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||||||||| ||||||||||||||| ||||| |||||||| || |||| |||||||||||||||||||||    
T  24009343 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 24009414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 138 - 212
Target Start/End: Complemental strand, 30717534 - 30717459
Alignment:
Q  138 tgtcgtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    |||||||||| |||| |||||||||||||| |||||| |||| ||| ||||||| |||||||||||||||||||||    
T  30717534 tgtcgtgtcgttgtcggacacgacacgtgttcgacactgggatacgcctaatccaaggagtgtccgtgcttcatag 30717459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 38117170 - 38117099
Alignment:
Q  142 gtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    |||| |||||| ||||| ||||||||||||||| |||||||| ||||||||||| |||||||||||||||||    
T  38117170 gtgttggtgtcggacacaacacgtgtccgacaccgggacacgcctaatccgaggggtgtccgtgcttcatag 38117099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 113 - 213
Target Start/End: Complemental strand, 20242762 - 20242666
Alignment:
Q  113 tcacataattcagtgtaattttatgtgtcgtgtcggtgtcagacacgacacgtgtccgacacg-ggacacgtctaatccgaggagtgtccgtgcttcata 211  Q
    |||||||||||||||||||| |||     ||||||||||| ||||| ||||||||| |||||| ||||||| || |||||| ||||||| ||||||||||    
T  20242762 tcacataattcagtgtaattatat-----gtgtcggtgtcggacacaacacgtgtctgacacgaggacacgccttatccgaagagtgtctgtgcttcata 20242668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 142 - 213
Target Start/End: Original strand, 15972921 - 15972993
Alignment:
Q  142 gtgtcggtgtcagacacgacacgtgtccgac-acgggacacgtctaatccgaggagtgtccgtgcttcatagg 213  Q
    ||||||||||| |||||||||||||||||||  ||||||||  ||||||||| || |||||||||||||||||    
T  15972921 gtgtcggtgtcggacacgacacgtgtccgacgccgggacacacctaatccgaagaatgtccgtgcttcatagg 15972993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 137 - 212
Target Start/End: Complemental strand, 24975330 - 24975255
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    |||||||||| ||||||||||| ||| ||||||||||| ||||||  ||||||| ||||||||||||||||||||||    
T  24975330 gtgtcgtgtccgtgtcagacac-acatgtgtccgacactgggacaaatctaatctgaggagtgtccgtgcttcatag 24975255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 37559025 - 37559096
Alignment:
Q  142 gtgtcggtgtcagacacgacacgtgtccgacacggg-acacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||||||||| |||  |||||||||||||||| || |||||  ||||||||||||||||||||||||||||    
T  37559025 gtgtcggtgtcggacttgacacgtgtccgacaccggtacacgcttaatccgaggagtgtccgtgcttcatag 37559096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 137 - 211
Target Start/End: Original strand, 44860374 - 44860449
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgcttcata 211  Q
    ||||||||| |||||  ||||||||| |||||||||| ||||||||  ||||| ||||||||||||||||||||||    
T  44860374 gtgtcgtgttggtgttggacacgacatgtgtccgacatcgggacacacctaattcgaggagtgtccgtgcttcata 44860449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 113 - 212
Target Start/End: Original strand, 41843465 - 41843565
Alignment:
Q  113 tcacataattcagtgtaattttatgtgtcg-tgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcat 210  Q
    ||||||||||| || ||||| ||||||||| ||| | |||| ||| ||||||||||||||||| ||||||||  | |||||||||||||| |||||||||    
T  41843465 tcacataattcggtataattatatgtgtcggtgttg-tgtcggacgcgacacgtgtccgacacggggacacgctttatccgaggagtgtctgtgcttcat 41843563  T
Q  211 ag 212  Q
    ||    
T  41843564 ag 41843565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 137 - 212
Target Start/End: Complemental strand, 11223868 - 11223793
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||| ||| |||||| |||||||||| |||| ||||| |||||||| |||||| ||||||||||||||||||||||    
T  11223868 gtgtcatgtaggtgtcggacacgacac-tgtctgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 11223793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 143 - 210
Target Start/End: Original strand, 19942314 - 19942382
Alignment:
Q  143 tgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcat 210  Q
    |||||||||| |||||| || ||||| ||||| |||||||| |||||||||||||||||| ||||||||    
T  19942314 tgtcggtgtcggacacggcatgtgtctgacaccgggacacgcctaatccgaggagtgtccatgcttcat 19942382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 23354978 - 23354926
Alignment:
Q  158 cgacacgtgtccgacacgggacacgtctaatccgaggagtgtccgtgcttcat 210  Q
    |||| |||||| ||||||||||||| |||||||||||||||||| ||||||||    
T  23354978 cgacccgtgtctgacacgggacacgcctaatccgaggagtgtccttgcttcat 23354926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 137 - 212
Target Start/End: Complemental strand, 34784987 - 34784911
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||||||||||| || |||||||||| |||| ||||| |||||||| || || ||||||||||| |||||||||||    
T  34784987 gtgtcgtgtcggtatcggacacgacacctgtctgacacggggacacgccttattcgaggagtgtctgtgcttcatag 34784911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 137 - 212
Target Start/End: Complemental strand, 36096380 - 36096304
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||||||||| |||| ||||||||||||||| ||||| |||||||| || | || | |||||||||||||||||||    
T  36096380 gtgtcgtgtcgatgtcggacacgacacgtgtctgacacggggacacgccttaaccaaagagtgtccgtgcttcatag 36096304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 164 - 211
Target Start/End: Complemental strand, 23354629 - 23354582
Alignment:
Q  164 gtgtccgacacgggacacgtctaatccgaggagtgtccgtgcttcata 211  Q
    ||||| ||||||||||||| ||||||||||||||||||||| ||||||    
T  23354629 gtgtctgacacgggacacgcctaatccgaggagtgtccgtggttcata 23354582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 115 - 188
Target Start/End: Complemental strand, 5891812 - 5891738
Alignment:
Q  115 acataattcagtgtaattttatgtgtcgtgtcggtgtcagacacgacacgtgtccgaca-cgggacacgtctaat 188  Q
    ||||||||  |||||||| || |||||||||||||||  ||||||||||||||| |||| || ||||||||||||    
T  5891812 acataattatgtgtaattataagtgtcgtgtcggtgtttgacacgacacgtgtcagacatcgagacacgtctaat 5891738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 12224271 - 12224329
Alignment:
Q  142 gtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgt 199  Q
    ||||||||||| ||||||| ||||||||||||| |||||||| ||||||| ||||||||    
T  12224271 gtgtcggtgtcggacacgatacgtgtccgacactgggacacgcctaatccaaggagtgt 12224329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 137 - 210
Target Start/End: Original strand, 15657918 - 15657992
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcat 210  Q
    ||||||||| | |||| ||| ||||||||||||||| | |||||||| ||| |||||||||||||| ||||||||    
T  15657918 gtgtcgtgttgatgtcggacgcgacacgtgtccgacgccgggacacgcctagtccgaggagtgtccatgcttcat 15657992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 143 - 212
Target Start/End: Original strand, 27084318 - 27084388
Alignment:
Q  143 tgtcggtgtcagacacgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    |||||||||| |||||||||||||||| ||| || |||||| |||||| ||||||||||  ||||||||||    
T  27084318 tgtcggtgtcggacacgacacgtgtccaacaccgagacacgcctaatcggaggagtgtctctgcttcatag 27084388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 16301161 - 16301097
Alignment:
Q  148 gtgtcagacacgacacgtgtccgacacgggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    |||||| |||||| |||| |||||||||||||| | |||||||||||||| ||  ||||||||||    
T  16301161 gtgtcaaacacgatacgtatccgacacgggacatgactaatccgaggagtatctttgcttcatag 16301097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 142 - 213
Target Start/End: Complemental strand, 34993993 - 34993921
Alignment:
Q  142 gtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcatagg 213  Q
    ||||| |||||  |||||||| ||||||||||| |||||||| ||||| | |||||||| |||||||||||||    
T  34993993 gtgtcagtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgcttcatagg 34993921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 140 - 214
Target Start/End: Original strand, 4207913 - 4207988
Alignment:
Q  140 tcgtgtcggtgtcagacacgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgcttcataggt 214  Q
    ||||||||||||| |||||||||||||| ||||| ||  |||||| |||||||| |||||| | || |||||||||    
T  4207913 tcgtgtcggtgtcggacacgacacgtgttcgacaccgaaacacgtttaatccgaagagtgttcatgtttcataggt 4207988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 142 - 204
Target Start/End: Original strand, 5040782 - 5040845
Alignment:
Q  142 gtgtcggtgtcagacacgacacgtgtccgac-acgggacacgtctaatccgaggagtgtccgtg 204  Q
    ||||||||||| ||||||||| |||||||||  ||||||||| ||| ||| |||||||||||||    
T  5040782 gtgtcggtgtcggacacgacatgtgtccgacgccgggacacgcctagtccaaggagtgtccgtg 5040845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 140 - 212
Target Start/End: Complemental strand, 22084832 - 22084756
Alignment:
Q  140 tcgtgtcggtgtcagacacgacacgtgtccgacac----gggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||||| ||||| ||||| ||||||||| |||||    |||||||| ||||||||| ||||||| |||||||||||    
T  22084832 tcgtgtcagtgtcggacacaacacgtgtctgacaccaccgggacacgcctaatccgatgagtgtctgtgcttcatag 22084756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 148 - 211
Target Start/End: Original strand, 35449561 - 35449627
Alignment:
Q  148 gtgtcagacacgacacgtgtccgacacggga-cacgtct--aatccgaggagtgtccgtgcttcata 211  Q
    |||||||||||||||| ||||||||||  || |||||||  ||||||||||||||| ||||||||||    
T  35449561 gtgtcagacacgacacatgtccgacaccagaacacgtctctaatccgaggagtgtctgtgcttcata 35449627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 17776648 - 17776714
Alignment:
Q  144 gtcggtgtcagacacgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgcttca 209  Q
    ||||||||  ||||||||  |||||||||  ||||||| | ||||||||||||||||||||||||||    
T  17776648 gtcggtgttggacacgacgtgtgtccgacctcgggacaggcctaatccgaggagtgtccgtgcttca 17776714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 159 - 212
Target Start/End: Original strand, 28412422 - 28412476
Alignment:
Q  159 gacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    |||||||||||||||| |||||||| ||||| ||||||| ||| |||||||||||    
T  28412422 gacacgtgtccgacactgggacacggctaattcgaggagcgtcagtgcttcatag 28412476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 212
Target Start/End: Complemental strand, 34221501 - 34221463
Alignment:
Q  174 cgggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||||||| |||||||||||||| ||||||||||||||    
T  34221501 cgggacacgcctaatccgaggagtttccgtgcttcatag 34221463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 214
Target Start/End: Complemental strand, 37411279 - 37411182
Alignment:
Q  113 tcacataattcagtgtaattttatgtgtcgtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcata 211  Q
    |||||||||||||||| ||| |||||||||      ||||  ||||||| |||||||||||| |||||||| ||| ||||||||||| | ||||||| ||    
T  37411279 tcacataattcagtgtgattatatgtgtcga-----tgtcgaacacgacgcgtgtccgacactgggacacgcctagtccgaggagtgcctgtgcttcgta 37411185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 212
Target Start/End: Complemental strand, 15907912 - 15907851
Alignment:
Q  152 cagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    |||||||||||| | |||||||| |||||||| | |||| || |||||||||||||||||||    
T  15907912 cagacacgacacatatccgacaccgggacacgcccaatctgatgagtgtccgtgcttcatag 15907851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 176 - 213
Target Start/End: Complemental strand, 19536397 - 19536360
Alignment:
Q  176 ggacacgtctaatccgaggagtgtccgtgcttcatagg 213  Q
    ||||||| |||||||||||||||||| |||||||||||    
T  19536397 ggacacgcctaatccgaggagtgtccatgcttcatagg 19536360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 214
Target Start/End: Complemental strand, 20539667 - 20539630
Alignment:
Q  177 gacacgtctaatccgaggagtgtccgtgcttcataggt 214  Q
    |||||| || ||||||||||||||||||||||||||||    
T  20539667 gacacgcctgatccgaggagtgtccgtgcttcataggt 20539630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 48
Target Start/End: Original strand, 34017744 - 34017773
Alignment:
Q  19 gatttcatcatcccacacaagtggtagtgg 48  Q
    ||||||||||||||||||||||||||||||    
T  34017744 gatttcatcatcccacacaagtggtagtgg 34017773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 143 - 214
Target Start/End: Original strand, 37497169 - 37497242
Alignment:
Q  143 tgtcggtgtcagacac-gacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcataggt 214  Q
    |||||||||||||||| ||||| ||| || ||| |||||| | ||||||| || ||||||||||||||||||||    
T  37497169 tgtcggtgtcagacaccgacacatgttcggcaccgggacatggctaatcccagaagtgtccgtgcttcataggt 37497242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 212
Target Start/End: Original strand, 38919287 - 38919336
Alignment:
Q  163 cgtgtccgacacgggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    |||||||||||| |||||||||||||| || ||||||  |||||||||||    
T  38919287 cgtgtccgacacaggacacgtctaatctgaagagtgtttgtgcttcatag 38919336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 175 - 211
Target Start/End: Complemental strand, 3444863 - 3444827
Alignment:
Q  175 gggacacgtctaatccgaggagtgtccgtgcttcata 211  Q
    |||||| | ||||||||||||||||||||||||||||    
T  3444863 gggacatgcctaatccgaggagtgtccgtgcttcata 3444827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 176 - 212
Target Start/End: Complemental strand, 10535721 - 10535685
Alignment:
Q  176 ggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||||| |||||||||||||||| ||||||||||||    
T  10535721 ggacacgcctaatccgaggagtgttcgtgcttcatag 10535685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 185 - 213
Target Start/End: Original strand, 18622694 - 18622722
Alignment:
Q  185 taatccgaggagtgtccgtgcttcatagg 213  Q
    |||||||||||||||||||||||||||||    
T  18622694 taatccgaggagtgtccgtgcttcatagg 18622722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 149 - 212
Target Start/End: Original strand, 19959881 - 19959945
Alignment:
Q  149 tgtcagacacgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    |||||||||||||| |||||||||| || ||| |||||||||| | |||| || |||||||||||    
T  19959881 tgtcagacacgacaagtgtccgacaccgagacgcgtctaatccaaagagtatcggtgcttcatag 19959945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 137 - 212
Target Start/End: Complemental strand, 32749830 - 32749754
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||||||||| |||| |||  |||| ||||||||||| |||||||| || |||  ||||||||||| |||||||||    
T  32749830 gtgtcgtgtcgatgtcggacgtgacatgtgtccgacactgggacacgccttatctaaggagtgtccgcgcttcatag 32749754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 137 - 212
Target Start/End: Original strand, 241648 - 241724
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||||||| |||||| ||||||||||||||||||||| |||||||| |||||||||| ||||||||||||||||||    
T  241648 gtgtcgtgttggtgtcggacacgacacgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttcatag 241724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 137 - 210
Target Start/End: Complemental strand, 9752 - 9678
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgcttcat 210  Q
    ||||||||| ||||||||||||||||| |||| |||| |||||||||| ||||||||||||||||||||||||||    
T  9752 gtgtcgtgttggtgtcagacacgacacttgtctgacatcgggacacgtataatccgaggagtgtccgtgcttcat 9678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 2e-19; HSPs: 59)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 143 - 212
Target Start/End: Original strand, 17123097 - 17123166
Alignment:
Q  143 tgtcggtgtcagacacgacacgtgtccgacacgggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    |||||||||  ||||||| || |||||||||||||||||| |||||||||||||||||||||||||||||    
T  17123097 tgtcggtgttggacacgaaacatgtccgacacgggacacgcctaatccgaggagtgtccgtgcttcatag 17123166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 137 - 212
Target Start/End: Original strand, 39698595 - 39698671
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgacacgg-gacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    |||||||||||||||| ||||||||| || |||||||| | |||||| |||||||||||||||||||||||||||||    
T  39698595 gtgtcgtgtcggtgtcggacacgacatgtatccgacaccgagacacgcctaatccgaggagtgtccgtgcttcatag 39698671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 21576756 - 21576685
Alignment:
Q  142 gtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    |||||| |||| ||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||    
T  21576756 gtgtcgatgtcggacacgacacgtgtctgacactgggacacgcctaatccgaggagtgtccgtgcttcatag 21576685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 117 - 203
Target Start/End: Original strand, 43554549 - 43554636
Alignment:
Q  117 ataattcagtgtaattttatgtgtcgtgtcggtgtcagacac-gacacgtgtccgacacgggacacgtctaatccgaggagtgtccgt 203  Q
    |||||| ||||||||  || |||||||||||||||| ||||| ||| |||||||||||||||||||| |||||||||| |||||||||    
T  43554549 ataatttagtgtaatcataggtgtcgtgtcggtgtcggacaccgacgcgtgtccgacacgggacacgcctaatccgagaagtgtccgt 43554636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 137 - 215
Target Start/End: Complemental strand, 36642767 - 36642689
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgacacgggacacgtctaatccgaggagtgtccgtgcttcataggta 215  Q
    ||||| ||| |||||| ||||||||||||||||||||||||||||| |||||  |||||||||| ||||||| ||||||    
T  36642767 gtgtcatgttggtgtcggacacgacacgtgtccgacacgggacacgcctaattggaggagtgtcggtgcttcgtaggta 36642689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 114 - 213
Target Start/End: Original strand, 14873542 - 14873642
Alignment:
Q  114 cacataattcagtgtaattttatgtgtcg-tgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcata 211  Q
    ||||||||| ||||||||| ||||||||| ||||  |||| ||| | |||||||||| |||| |||||||| ||||||||||||||||||||||||||||    
T  14873542 cacataatttagtgtaattatatgtgtcggtgtca-tgtcggacgcaacacgtgtccaacaccgggacacgcctaatccgaggagtgtccgtgcttcata 14873640  T
Q  212 gg 213  Q
    ||    
T  14873641 gg 14873642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 142 - 210
Target Start/End: Complemental strand, 21191067 - 21190998
Alignment:
Q  142 gtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcat 210  Q
    ||||||||||| ||||| ||||||||||||| | |||||||| |||||||||||||||||||||||||||    
T  21191067 gtgtcggtgtcggacacaacacgtgtccgactccgggacacgcctaatccgaggagtgtccgtgcttcat 21190998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 113 - 212
Target Start/End: Original strand, 31084347 - 31084447
Alignment:
Q  113 tcacataattcagtgtaattttatgtgtcg-tgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcat 210  Q
    |||||||||||| |||||||  | |||||| ||||| |||| ||||||||||||||||||||| |||||| | ||||||||||||||||||||| |||||    
T  31084347 tcacataattcaatgtaattacaagtgtcgatgtcg-tgtcggacacgacacgtgtccgacactgggacatgcctaatccgaggagtgtccgtggttcat 31084445  T
Q  211 ag 212  Q
    ||    
T  31084446 ag 31084447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 136 - 212
Target Start/End: Complemental strand, 32766949 - 32766872
Alignment:
Q  136 tgtgtcgtgtcggtgtcagacacgacacgtgtccgacacg-ggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    |||||||||||||||||  | ||||||||||||||||||  ||| |||||||||| ||||||||||||||||||||||    
T  32766949 tgtgtcgtgtcggtgtcgaaaacgacacgtgtccgacaccaggatacgtctaatctgaggagtgtccgtgcttcatag 32766872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 142 - 214
Target Start/End: Original strand, 43564929 - 43565002
Alignment:
Q  142 gtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcataggt 214  Q
    ||||||||||| ||||||||| ||||||||| | |||||||| |||||||||| ||||||||||||||||||||    
T  43564929 gtgtcggtgtcggacacgacatgtgtccgacgccgggacacgcctaatccgagaagtgtccgtgcttcataggt 43565002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 137 - 212
Target Start/End: Original strand, 7677759 - 7677835
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    |||||||||||||||| |||||| ||| |||||||||| |||||||| ||||||||||||| ||| |||||||||||    
T  7677759 gtgtcgtgtcggtgtctgacacgtcacatgtccgacaccgggacacgcctaatccgaggagagtcggtgcttcatag 7677835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 137 - 212
Target Start/End: Original strand, 21522804 - 21522880
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    |||||||||||||||| ||||||||||||||||| || ||||||||| ||||||| | |||||||||||| ||||||    
T  21522804 gtgtcgtgtcggtgtcggacacgacacgtgtccggcaccgggacacgcctaatccaaagagtgtccgtgcatcatag 21522880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 137 - 212
Target Start/End: Original strand, 21533370 - 21533446
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    |||||||||||||||| ||||||||||||||||| || ||||||||| ||||||| | |||||||||||| ||||||    
T  21533370 gtgtcgtgtcggtgtcggacacgacacgtgtccggcaccgggacacgcctaatccaaagagtgtccgtgcatcatag 21533446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 142 - 209
Target Start/End: Complemental strand, 39268609 - 39268541
Alignment:
Q  142 gtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttca 209  Q
    ||||||||||  ||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||    
T  39268609 gtgtcggtgttggacacgacatgtgtccgacactgggacacgcctaatccgaggagtgtccgtgcttca 39268541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 137 - 211
Target Start/End: Original strand, 3966557 - 3966632
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcata 211  Q
    |||||||||| ||||| ||||| ||| |||||| |||  |||||||||||||||||||||||||||||||||||||    
T  3966557 gtgtcgtgtcagtgtcggacacaacatgtgtccaacagagggacacgtctaatccgaggagtgtccgtgcttcata 3966632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 137 - 211
Target Start/End: Original strand, 21542084 - 21542159
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgcttcata 211  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||| | ||||| |||| ||||||||| |||||    
T  21542084 gtgtcgtgtcggtgtcggacacgacacgtgtccgacaccgggacacgccgaatccaaggaatgtccgtgcatcata 21542159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 137 - 209
Target Start/End: Original strand, 18592127 - 18592200
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgcttca 209  Q
    |||||||||||||||| ||||| ||||||||| |||| ||||||||| ||||| ||| ||||||||||||||||    
T  18592127 gtgtcgtgtcggtgtcggacacaacacgtgtctgacatcgggacacggctaattcgatgagtgtccgtgcttca 18592200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 137 - 208
Target Start/End: Original strand, 30183603 - 30183675
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttc 208  Q
    ||||||||| ||| |||||||||||||||||||||||| |||||||| ||||| |||| |||||| |||||||    
T  30183603 gtgtcgtgttggtatcagacacgacacgtgtccgacactgggacacgcctaattcgagaagtgtctgtgcttc 30183675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 137 - 211
Target Start/End: Original strand, 6401552 - 6401627
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcata 211  Q
    |||||||||| ||||| ||||||||||||||| ||||| |||| ||| || |||| ||||||||||||||||||||    
T  6401552 gtgtcgtgtcagtgtcggacacgacacgtgtctgacacggggatacgccttatccaaggagtgtccgtgcttcata 6401627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 154 - 212
Target Start/End: Complemental strand, 16304425 - 16304366
Alignment:
Q  154 gacacgacacgtgtccgacacgg-gacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||||||||||| ||||||| | ||||||||||||||||||| ||||||||||||||||    
T  16304425 gacacgacacgtgcccgacaccgagacacgtctaatccgaggaatgtccgtgcttcatag 16304366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 113 - 210
Target Start/End: Complemental strand, 23016024 - 23015926
Alignment:
Q  113 tcacataattcagtgtaattttatgtgtcg-tgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcat 210  Q
    |||||||||||||||||||| || |||||| ||| | | || ||||||||| ||||||||||  |||||||| ||||||||||||||||||| |||||||    
T  23016024 tcacataattcagtgtaattataggtgtcgatgttg-tatcggacacgacatgtgtccgacattgggacacgcctaatccgaggagtgtccgagcttcat 23015926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 42893408 - 42893479
Alignment:
Q  142 gtgtcggtgtcagacacgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||||||||||||||| |||||||||||||| | ||||||| |||||  ||||||||||| ||||||||||    
T  42893408 gtgtcggtgtcagacacaacacgtgtccgacaccaggacacgcctaatatgaggagtgtccatgcttcatag 42893479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 113 - 167
Target Start/End: Complemental strand, 5468013 - 5467959
Alignment:
Q  113 tcacataattcagtgtaattttatgtgtcgtgtcggtgtcagacacgacacgtgt 167  Q
    |||||||||||||||||||| || ||||||||||||||||| | |||||||||||    
T  5468013 tcacataattcagtgtaattataggtgtcgtgtcggtgtcacatacgacacgtgt 5467959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 117 - 200
Target Start/End: Original strand, 15382507 - 15382592
Alignment:
Q  117 ataattcagtgtaattttatgtgtcg-tgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtc 200  Q
    |||||||||| |||||  | |||||| |||||||||  |||||||||| |||||||||| |||||||| |||||||||||||||||    
T  15382507 ataattcagtataattacaagtgtcggtgtcggtgttggacacgacacatgtccgacaccgggacacgcctaatccgaggagtgtc 15382592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 164 - 213
Target Start/End: Complemental strand, 39695999 - 39695950
Alignment:
Q  164 gtgtccgacacgggacacgtctaatccgaggagtgtccgtgcttcatagg 213  Q
    ||||||||||||||||||| ||||||| ||||||||| ||||||||||||    
T  39695999 gtgtccgacacgggacacgcctaatcctaggagtgtcggtgcttcatagg 39695950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 137 - 212
Target Start/End: Original strand, 21814315 - 21814391
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    |||||||||||||||| ||||||||||||||| | ||| |||||||| || |||| |||| ||| ||||||||||||    
T  21814315 gtgtcgtgtcggtgtcggacacgacacgtgtctggcacggggacacgccttatccaaggaatgttcgtgcttcatag 21814391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 161 - 212
Target Start/End: Original strand, 35017110 - 35017162
Alignment:
Q  161 cacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||||||| ||| ||||||||| |||||||||||||||||||||||||||||    
T  35017110 cacgtgtccaacatcgggacacgcctaatccgaggagtgtccgtgcttcatag 35017162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 148 - 210
Target Start/End: Original strand, 43001859 - 43001922
Alignment:
Q  148 gtgtcagacacgacacgtgtccgacacg-ggacacgtctaatccgaggagtgtccgtgcttcat 210  Q
    ||||| |||||||||||||||  ||||  ||||||| |||||||||||||||||||||||||||    
T  43001859 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 43001922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 210
Target Start/End: Complemental strand, 30502423 - 30502330
Alignment:
Q  113 tcacataattcagtgtaattttatgtgtcgtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcat 210  Q
    |||| ||||||||||||||| |||||||||     ||||| |||||||||| |||||||||| |||||| | ||||||| |||| ||| ||||||||||    
T  30502423 tcacttaattcagtgtaattatatgtgtcg-----gtgtcggacacgacacatgtccgacactgggacatgcctaatccaaggattgttcgtgcttcat 30502330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 210
Target Start/End: Complemental strand, 30542766 - 30542673
Alignment:
Q  113 tcacataattcagtgtaattttatgtgtcgtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcat 210  Q
    |||| ||||||||||||||| |||||||||     ||||| |||||||||| |||||||||| |||||| | ||||||| |||| ||| ||||||||||    
T  30542766 tcacttaattcagtgtaattatatgtgtcg-----gtgtcggacacgacacatgtccgacactgggacatgcctaatccaaggattgttcgtgcttcat 30542673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 117 - 214
Target Start/End: Complemental strand, 36577707 - 36577610
Alignment:
Q  117 ataattcagtgtaattttatgtgtcgtgtcggtgtcagacac-gacacgtgtccgacacgggacacgtctaatccgaggagtgtccgtgcttcataggt 214  Q
    |||||| ||| ||||| ||||||||||||||||||| ||||| ||  ||| |||||||||||| ||| ||||||| || |||||| ||||||| |||||    
T  36577707 ataatttagtataattatatgtgtcgtgtcggtgtc-gacaccgatgcgtatccgacacgggatacgcctaatccaagaagtgtctgtgcttcgtaggt 36577610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Original strand, 10298633 - 10298670
Alignment:
Q  176 ggacacgtctaatccgaggagtgtccgtgcttcatagg 213  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  10298633 ggacacgcctaatccgaggagtgtccgtgcttcatagg 10298670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 30098391 - 30098456
Alignment:
Q  148 gtgtcagacacgacacgtgtccgacacg-ggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||| ||||||||||||||| |||||  ||||||  |||||||||||| ||||||||||||||||    
T  30098391 gtgtcggacacgacacgtgtcagacaccaggacacacctaatccgaggaatgtccgtgcttcatag 30098456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 137 - 213
Target Start/End: Original strand, 40131675 - 40131752
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcatagg 213  Q
    ||||||| ||| |||||||||||||  ||||| ||||  |||||||||||| ||| ||||||||||||| ||||||||    
T  40131675 gtgtcgtatcgatgtcagacacgacttgtgtctgacattgggacacgtctactccaaggagtgtccgtgtttcatagg 40131752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 137 - 188
Target Start/End: Original strand, 12641728 - 12641780
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgacacgg-gacacgtctaat 188  Q
    ||||||||| |||||||||||| |||||||| |||||||| ||||||||||||    
T  12641728 gtgtcgtgttggtgtcagacacaacacgtgttcgacacggagacacgtctaat 12641780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 161 - 204
Target Start/End: Original strand, 17088358 - 17088402
Alignment:
Q  161 cacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtg 204  Q
    |||||||||||||| |||||||| |||||||||||||||||||||    
T  17088358 cacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtg 17088402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 165 - 212
Target Start/End: Complemental strand, 19820376 - 19820328
Alignment:
Q  165 tgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    |||||||||| |||||||| |||||| ||||||||||||||||||||||    
T  19820376 tgtccgacaccgggacacgcctaatcagaggagtgtccgtgcttcatag 19820328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 176 - 212
Target Start/End: Complemental strand, 22423800 - 22423764
Alignment:
Q  176 ggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||||| |||||||||||||||||||||||||||||    
T  22423800 ggacacgcctaatccgaggagtgtccgtgcttcatag 22423764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 118 - 161
Target Start/End: Original strand, 9929649 - 9929692
Alignment:
Q  118 taattcagtgtaattttatgtgtcgtgtcggtgtcagacacgac 161  Q
    ||||||||||||||| |||||||||||||||| || ||||||||    
T  9929649 taattcagtgtaattatatgtgtcgtgtcggtatcggacacgac 9929692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 154 - 212
Target Start/End: Complemental strand, 21194122 - 21194063
Alignment:
Q  154 gacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    |||||||||| |||| ||||| ||| |||| |||||||||||||||||||||||| ||||    
T  21194122 gacacgacacatgtcagacaccggggcacgcctaatccgaggagtgtccgtgctttatag 21194063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 210
Target Start/End: Complemental strand, 21351899 - 21351852
Alignment:
Q  164 gtgtccgacacggga-cacgtctaatccgaggagtgtccgtgcttcat 210  Q
    ||||||||||| ||| |||||||||||||| |||||||||||||||||    
T  21351899 gtgtccgacactggaacacgtctaatccgaagagtgtccgtgcttcat 21351852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 147 - 213
Target Start/End: Original strand, 27932288 - 27932355
Alignment:
Q  147 ggtgtcagacacgacacgtgtccgacacg-ggacacgtctaatccgaggagtgtccgtgcttcatagg 213  Q
    |||||| ||||||||||||||| |||||  ||||||| ||||| ||||||||||  ||||||||||||    
T  27932288 ggtgtcggacacgacacgtgtcggacaccaggacacgcctaattcgaggagtgtttgtgcttcatagg 27932355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 142 - 208
Target Start/End: Complemental strand, 30099049 - 30098982
Alignment:
Q  142 gtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttc 208  Q
    ||||||||||| || |||||||||||| ||||| |||||||| || |||| |||||||| ||||||||    
T  30099049 gtgtcggtgtcggatacgacacgtgtctgacacggggacacgccttatccaaggagtgttcgtgcttc 30098982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 216
Target Start/End: Complemental strand, 40000528 - 40000489
Alignment:
Q  177 gacacgtctaatccgaggagtgtccgtgcttcataggtat 216  Q
    ||||||||| ||| ||||||||||||||||||||||||||    
T  40000528 gacacgtcttatctgaggagtgtccgtgcttcataggtat 40000489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 157 - 214
Target Start/End: Complemental strand, 15410433 - 15410375
Alignment:
Q  157 acgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcataggt 214  Q
    |||||| |||||| |||| ||||||||||||| ||||||||||| ||||||| ||||||    
T  15410433 acgacaagtgtccaacaccgggacacgtctaagccgaggagtgttcgtgcttaataggt 15410375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 210
Target Start/End: Complemental strand, 18421876 - 18421779
Alignment:
Q  113 tcacataattcagtgtaattttatgtgtcgtgtcggtgtcagacacgacacgtgtccgacacggg-----acacgtctaatccgaggagtgtccgtgctt 207  Q
    ||||||||| |||||||||| |||||||||     | ||| |||||||||| |||||| ||| ||     ||||||||||||||||||||||| ||||||    
T  18421876 tcacataatccagtgtaattatatgtgtcg-----gcgtcggacacgacacatgtccggcaccgggactgacacgtctaatccgaggagtgtctgtgctt 18421782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 137 - 210
Target Start/End: Original strand, 19579755 - 19579829
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcat 210  Q
    |||||||||| ||||| |||||||||  ||||  |||| |||||||| |||||||||||||||| |||| |||||    
T  19579755 gtgtcgtgtcagtgtcggacacgacatatgtctaacaccgggacacgcctaatccgaggagtgtacgtgtttcat 19579829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 214
Target Start/End: Complemental strand, 28588709 - 28588612
Alignment:
Q  113 tcacataattcagtgtaattttatgtgtcgtgtcggtgtcagacacgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgcttcata 211  Q
    |||||||||||||||||||| ||      ||||||||||| |||||||||| | || |||| | |||||||  |||||||| |||||||| |||||||||    
T  28588709 tcacataattcagtgtaattata-----ggtgtcggtgtcggacacgacacatatctgacaccaggacacgcttaatccgaagagtgtccatgcttcata 28588615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 137 - 213
Target Start/End: Complemental strand, 37328849 - 37328774
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcatagg 213  Q
    |||||||||||||||| |||||||  |||  |||| || |||| |||  |||||||||||||||||||||||||||||    
T  37328849 gtgtcgtgtcggtgtcggacacgatgcgt--ccgataccgggatacgcttaatccgaggagtgtccgtgcttcatagg 37328774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 38464361 - 38464311
Alignment:
Q  165 tgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcataggt 214  Q
    |||||||||| |||||||  ||||||||||||||||| |||||||||||||    
T  38464361 tgtccgacaccgggacacacctaatccgaggagtgtctgtgcttcataggt 38464311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 141 - 212
Target Start/End: Original strand, 2419913 - 2419986
Alignment:
Q  141 cgtgtcggtgtcagacac-gacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||| |||||||||||| ||  |||||||||| | |||||||  ||||||||| |||||||||||||||||||    
T  2419913 cgtgttggtgtcagacaccgatgcgtgtccgaccccgggacacacctaatccgatgagtgtccgtgcttcatag 2419986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 208
Target Start/End: Original strand, 4105341 - 4105374
Alignment:
Q  175 gggacacgtctaatccgaggagtgtccgtgcttc 208  Q
    |||||||| |||||||||||||||||||||||||    
T  4105341 gggacacgcctaatccgaggagtgtccgtgcttc 4105374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 210
Target Start/End: Complemental strand, 24238660 - 24238603
Alignment:
Q  154 gacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcat 210  Q
    |||||||||||||||| |||| |||||| |  |||||| |||||||||||||||||||    
T  24238660 gacacgacacgtgtccaacactgggacatgcataatcctaggagtgtccgtgcttcat 24238603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 39205939 - 39206004
Alignment:
Q  148 gtgtcagacacgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||| ||||||||||||| |||||| ||||| |||| |||||| |||||||||  ||||||||||    
T  39205939 gtgtccgacacgacacgtgcccgacaccgggatacgtttaatccaaggagtgtctatgcttcatag 39206004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 178 - 214
Target Start/End: Original strand, 6770621 - 6770657
Alignment:
Q  178 acacgtctaatccgaggagtgtccgtgcttcataggt 214  Q
    ||||| ||||||||| |||||||||||||||||||||    
T  6770621 acacgcctaatccgaagagtgtccgtgcttcataggt 6770657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 161 - 212
Target Start/End: Complemental strand, 17593715 - 17593663
Alignment:
Q  161 cacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||||||| |||| ||||||||  ||||||||||||||||||| ||||||||    
T  17593715 cacgtgtccaacaccgggacacgcttaatccgaggagtgtccgtacttcatag 17593663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 162 - 213
Target Start/End: Complemental strand, 23290049 - 23289997
Alignment:
Q  162 acgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcatagg 213  Q
    ||||||| ||||| |||||||||||||||| || | |||||||||||||||||    
T  23290049 acgtgtctgacaccgggacacgtctaatccaagcaatgtccgtgcttcatagg 23289997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 176 - 212
Target Start/End: Complemental strand, 24906288 - 24906252
Alignment:
Q  176 ggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||||| ||||| |||||||||||||||||||||||    
T  24906288 ggacacgcctaattcgaggagtgtccgtgcttcatag 24906252  T

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Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 145 - 212
Target Start/End: Original strand, 42029803 - 42029871
Alignment:
Q  145 tcggtgtcagacacgacacgtgtccgacacgg-gacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    |||||||| |||||||||| |||| | ||||  |||||| || ||||||||||||||||||| ||||||    
T  42029803 tcggtgtcggacacgacacatgtctgtcacgtagacacgccttatccgaggagtgtccgtgcatcatag 42029871  T

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Target: scaffold0086 (Bit Score: 49; Significance: 8e-19; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 137 - 212
Target Start/End: Original strand, 2982 - 3058
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||||||||||| ||||||||||||||||| ||||| ||| ||||| ||||||||||||||||||||||| |||||    
T  2982 gtgtcgtgtcggtatcagacacgacacgtgttcgacaccggaacacgcctaatccgaggagtgtccgtgctccatag 3058  T

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Target: scaffold0057 (Bit Score: 49; Significance: 8e-19; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 137 - 214
Target Start/End: Original strand, 24078 - 24157
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgt--ccgacacgggacacgtctaatccgaggagtgtccgtgcttcataggt 214  Q
    |||||||||||||||| ||||| ||||||||  ||||||| ||||||| ||||||||| |||||||||||||||||||||    
T  24078 gtgtcgtgtcggtgtcggacacaacacgtgtgtccgacactggacacgcctaatccgatgagtgtccgtgcttcataggt 24157  T

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Target: scaffold0652 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 473 - 403
Alignment:
Q  142 gtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcata 211  Q
    ||||||||||| |||||||| |||||||||||| |||||||  ||||||||||||||||||||||||||||    
T  473 gtgtcggtgtcggacacgacgcgtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 403  T

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Target: scaffold0136 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 137 - 213
Target Start/End: Complemental strand, 3854 - 3777
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgcttcatagg 213  Q
    ||||||||| |||||| |||||||||| ||||||||| || |||||| |||||||||||||||||| |||||||||||    
T  3854 gtgtcgtgttggtgtcggacacgacacatgtccgacatcgagacacgcctaatccgaggagtgtccttgcttcatagg 3777  T

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Target: scaffold0450 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 137 - 212
Target Start/End: Complemental strand, 8640 - 8564
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgacacggg-acacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||||||||||| || ||||||| ||||||||||||| || ||||| ||||| |||||||||||||||||||||||    
T  8640 gtgtcgtgtcggtatcggacacgatacgtgtccgacactggtacacgcctaattcgaggagtgtccgtgcttcatag 8564  T

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Target: scaffold0053 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 8846 - 8917
Alignment:
Q  142 gtgtcggtgtcagacacgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||||||||| |||||||||||||||||||| || |||||| |||||| ||||||| ||||||||||||||    
T  8846 gtgtcggtgtcggacacgacacgtgtccgacaccgagacacgcctaatctgaggagtctccgtgcttcatag 8917  T

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Target: scaffold0793 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 155 - 212
Target Start/End: Complemental strand, 4879 - 4821
Alignment:
Q  155 acacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||||||| |||||||||| |||||||| |||||||||||||||||||||||||||||    
T  4879 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 4821  T

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Target: scaffold0008 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 137 - 210
Target Start/End: Complemental strand, 263377 - 263303
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgcttcat 210  Q
    ||||||||||||||||||||||||||||||| ||| | |  |||||| ||||||||||||||||||||| |||||    
T  263377 gtgtcgtgtcggtgtcagacacgacacgtgttcgataccaagacacgcctaatccgaggagtgtccgtggttcat 263303  T

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Target: scaffold0380 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 155 - 214
Target Start/End: Original strand, 8662 - 8722
Alignment:
Q  155 acacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcataggt 214  Q
    |||||||||||||||||||| |||| ||| ||||||| |||||||||||||||||||||||    
T  8662 acacgacacgtgtccgacactgggatacgcctaatccaaggagtgtccgtgcttcataggt 8722  T

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Target: scaffold0044 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 113 - 205
Target Start/End: Original strand, 53204 - 53303
Alignment:
Q  113 tcacataattcagtgtaattttatgtgtcg------tgtcggtgtcagacacgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgc 205  Q
    |||||||||||||||||||| || ||||||      |||||||||| |||| ||||||||||||||| |||||||||| |||||| || |||||||||||    
T  53204 tcacataattcagtgtaattataagtgtcggtgccgtgtcggtgtcggacatgacacgtgtccgacaccgggacacgtttaatccaagaagtgtccgtgc 53303  T

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Target: scaffold0512 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 5047 - 4976
Alignment:
Q  142 gtgtcggtgtcagacacgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    ||||||||||| ||||||||||||||||||||  | |||| | ||||||||||||||||| |||||||||||    
T  5047 gtgtcggtgtcggacacgacacgtgtccgacattgagacatgcctaatccgaggagtgtctgtgcttcatag 4976  T

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Target: scaffold0004 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 92875 - 92946
Alignment:
Q  147 ggtgtcagacacgacacgtgtccgacacg-ggacacgtctaatccgaggagtgtccgtgcttcataggtata 217  Q
    |||||| |||||||||| |||| |||||  ||||||| |||||||||||||||||||||||||||| |||||    
T  92875 ggtgtcggacacgacacatgtcggacacctggacacgcctaatccgaggagtgtccgtgcttcatatgtata 92946  T

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Target: scaffold0154 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 139 - 212
Target Start/End: Original strand, 13469 - 13543
Alignment:
Q  139 gtcgtgtcggtgtcagacacgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    |||||||||||||| |||||||||||| | ||||| ||||| ||  |||||||||||||||||||| ||||||||    
T  13469 gtcgtgtcggtgtcggacacgacacgtatacgacatcgggatacacctaatccgaggagtgtccgtacttcatag 13543  T

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Target: scaffold0475 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 142 - 213
Target Start/End: Original strand, 3356 - 3428
Alignment:
Q  142 gtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcatagg 213  Q
    ||||| ||||| |||| ||||||||   ||||| |||||||| ||||||||||||||||||||||||||||||    
T  3356 gtgtcagtgtcggacaagacacgtggtggacactgggacacgcctaatccgaggagtgtccgtgcttcatagg 3428  T

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Target: scaffold0306 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 113 - 215
Target Start/End: Original strand, 13424 - 13528
Alignment:
Q  113 tcacataattcagtgtaattttatgtgtcg-tgtcggtgtcagacacgacacgtgtccgacacg-ggacacgtctaatccgaggagtgtccgtgcttcat 210  Q
    ||||||||||||||| ||||  | | |||| |||||||||| ||||||||||| ||| |||||  ||||||  ||||||| |||||||||||||||||||    
T  13424 tcacataattcagtgcaattacaagggtcggtgtcggtgtcggacacgacacgcgtctgacactaggacacacctaatccaaggagtgtccgtgcttcat 13523  T
Q  211 aggta 215  Q
     ||||    
T  13524 tggta 13528  T

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Target: scaffold0152 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 113 - 215
Target Start/End: Complemental strand, 21903 - 21799
Alignment:
Q  113 tcacataattcagtgtaattttatgtgtcg-tgtcggtgtcagacacgacacgtgtccgacacg-ggacacgtctaatccgaggagtgtccgtgcttcat 210  Q
    ||||||||||||||| ||||  | | |||| |||||||||| ||||||||||| ||| |||||  ||||||  ||||||| |||||||||||||||||||    
T  21903 tcacataattcagtgcaattacaagggtcggtgtcggtgtcggacacgacacgcgtctgacactaggacacacctaatccaaggagtgtccgtgcttcat 21804  T
Q  211 aggta 215  Q
     ||||    
T  21803 tggta 21799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 142 - 209
Target Start/End: Original strand, 70326 - 70394
Alignment:
Q  142 gtgtcggtgtcagacacgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgcttca 209  Q
    ||||||||||| |||||||||||||||||||| | ||||| | ||||||||| |||||| |||||||||    
T  70326 gtgtcggtgtcggacacgacacgtgtccgacaccaggacatgcctaatccgatgagtgttcgtgcttca 70394  T

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Target: scaffold0123 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 113 - 212
Target Start/End: Complemental strand, 44560 - 44454
Alignment:
Q  113 tcacataattcagtgtaattttatgtgtcg------tgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgc 205  Q
    |||||||||||||||||||| |||||||||      |||||||||  ||||| ||||||||||||||| |||||| |  ||||| ||| |||||| ||||    
T  44560 tcacataattcagtgtaattatatgtgtcggtatcgtgtcggtgttggacacaacacgtgtccgacactgggacatggttaatctgagaagtgtctgtgc 44461  T
Q  206 ttcatag 212  Q
    |||||||    
T  44460 ttcatag 44454  T

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Target: scaffold0361 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 147 - 212
Target Start/End: Original strand, 14580 - 14646
Alignment:
Q  147 ggtgtcagacacgacacgtgtccgaca-cgggacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    |||||| |||||||||||||||||||| || |||||| ||||||  |||||||| ||||||||||||    
T  14580 ggtgtcggacacgacacgtgtccgacaccgagacacgcctaatcgaaggagtgtacgtgcttcatag 14646  T

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Target: scaffold0246 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 113 - 174
Target Start/End: Original strand, 19599 - 19660
Alignment:
Q  113 tcacataattcagtgtaattttatgtgtcgtgtcggtgtcagacacgacacgtgtccgacac 174  Q
    ||||||||||||||||||||  | ||||  |||||||||  |||||||||||||||||||||    
T  19599 tcacataattcagtgtaattacaagtgttatgtcggtgttggacacgacacgtgtccgacac 19660  T

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Target: scaffold0623 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 137 - 211
Target Start/End: Complemental strand, 6001 - 5926
Alignment:
Q  137 gtgtcgtgtcggtgtcagacacgacacgtgtccgacac-gggacacgtctaatccgaggagtgtccgtgcttcata 211  Q
    ||||||| ||||||||  |||||||||||||| ||||| | |||||| || |||| |||||||||||||| |||||    
T  6001 gtgtcgtatcggtgtcgaacacgacacgtgtctgacacagagacacgccttatccaaggagtgtccgtgcctcata 5926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 212
Target Start/End: Original strand, 46741 - 46776
Alignment:
Q  177 gacacgtctaatccgaggagtgtccgtgcttcatag 212  Q
    |||||| |||||||||||||||||||||||||||||    
T  46741 gacacgcctaatccgaggagtgtccgtgcttcatag 46776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 170
Target Start/End: Original strand, 51835 - 51890
Alignment:
Q  113 tcacataattcagtgtaattttatgtgtcgtgtcggtgtcagacacgacacgtgtccg 170  Q
    ||||||||||||||||||||  | ||||  |||||||||||||||||| |||||||||    
T  51835 tcacataattcagtgtaattacaagtgt--tgtcggtgtcagacacgatacgtgtccg 51890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 214
Target Start/End: Original strand, 21243 - 21280
Alignment:
Q  177 gacacgtctaatccgaggagtgtccgtgcttcataggt 214  Q
    |||||| |||||||||||||| ||||||||||||||||    
T  21243 gacacgcctaatccgaggagtatccgtgcttcataggt 21280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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