View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8537_high_14 (Length: 243)
Name: NF8537_high_14
Description: NF8537
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8537_high_14 |
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Alignment Details
Target: chr8 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 14 - 224
Target Start/End: Original strand, 40370390 - 40370600
Alignment:
| Q |
14 |
ttattctgcataagttattttccaacttaactgttcaataactgacagttaagttagaattaatttttatttcatttaagtttccagaattatgtattgg |
113 |
Q |
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| T |
40370390 |
ttatactgcataagttattttccaacttaactgttgaataactgacagttaagttagaattaatttttatttcagttaagtttccagaattatgtattgg |
40370489 |
T |
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| Q |
114 |
cagttattaggaagtttaaatgaaaaattagaattaattcagaagagttattatactatattttttagagttcatttttaatcatcgcaaatacttaatt |
213 |
Q |
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||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40370490 |
cagttattaggaaatttaaatgaaaaattagaattaattcagaagagttattatactatattttttagagttcatttttaatcatcgcaaatacttaatt |
40370589 |
T |
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| Q |
214 |
ttctatttgac |
224 |
Q |
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||||||||||| |
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| T |
40370590 |
ttctatttgac |
40370600 |
T |
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