View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8537_high_9 (Length: 301)
Name: NF8537_high_9
Description: NF8537
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8537_high_9 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 200 - 301
Target Start/End: Complemental strand, 13350747 - 13350646
Alignment:
| Q |
200 |
tttaagattgattaataatgacccttattgtgattggtgtaccaccaagacaaaaatgaacatttacgatcccgttaaaagaatgattagttatacccgc |
299 |
Q |
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| T |
13350747 |
tttaagattgatgattaatgagccatgttgtgattggtgtatcaccaagacaaaaatgaacatttacgatcccgttaaaagaatgattagttatacccgc |
13350648 |
T |
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| Q |
300 |
ct |
301 |
Q |
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| T |
13350647 |
ct |
13350646 |
T |
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