View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8537_low_22 (Length: 229)
Name: NF8537_low_22
Description: NF8537
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8537_low_22 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 37168379 - 37168607
Alignment:
| Q |
1 |
tcaatgcatgtgccttaatacctaaagagtatagtgtgtataaacttcactactacacaaagatatacatatgaatagcgcaacttcatctggtgatatt |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
37168379 |
tcaatgcatgtgccttaatacctaaagagtatagtgtgtataaacttcactactacacaaagatatacatatgaatagcacaacttcatctggtgatatt |
37168478 |
T |
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| Q |
101 |
catagcactatagcacgctctattgcatgctattactaccttcggccttgtatataagaagatttttggagtttgtgttatatttgtaagcagaagtcac |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37168479 |
catagcactatagcacgctctattgcatgctattactaccttcggcattgtatataagaagatttttggagtttgtgttatatttgtaagcagaagtcac |
37168578 |
T |
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| Q |
201 |
aaattactttgatatccttagaaatgcat |
229 |
Q |
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||||||||||||||||||||||||||||| |
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| T |
37168579 |
aaattactttgatatccttagaaatgcat |
37168607 |
T |
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