View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8538_low_11 (Length: 268)

Name: NF8538_low_11
Description: NF8538
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8538_low_11
NF8538_low_11
[»] chr6 (38 HSPs)
chr6 (55-185)||(6606095-6606225)
chr6 (53-185)||(5253219-5253351)
chr6 (53-185)||(34954615-34954747)
chr6 (55-185)||(8611972-8612102)
chr6 (55-185)||(21898630-21898760)
chr6 (53-185)||(13036000-13036132)
chr6 (53-168)||(3601083-3601198)
chr6 (55-185)||(8932643-8932773)
chr6 (55-185)||(8944109-8944239)
chr6 (57-185)||(2271303-2271429)
chr6 (55-180)||(19089485-19089610)
chr6 (77-181)||(8888868-8888972)
chr6 (80-180)||(9179759-9179859)
chr6 (89-180)||(9147288-9147379)
chr6 (77-180)||(24671886-24671989)
chr6 (55-185)||(30788851-30788979)
chr6 (55-185)||(12635796-12635926)
chr6 (80-185)||(29333162-29333266)
chr6 (55-159)||(5029825-5029929)
chr6 (61-180)||(11142590-11142709)
chr6 (55-142)||(21872928-21873015)
chr6 (55-185)||(12606412-12606542)
chr6 (56-168)||(8938710-8938822)
chr6 (55-131)||(14783418-14783494)
chr6 (56-180)||(2105092-2105213)
chr6 (67-177)||(29444775-29444885)
chr6 (77-165)||(3587965-3588053)
chr6 (55-131)||(9633623-9633699)
chr6 (53-180)||(31129164-31129291)
chr6 (93-164)||(33859355-33859426)
chr6 (108-185)||(10311520-10311597)
chr6 (110-178)||(21016804-21016872)
chr6 (90-168)||(14107391-14107469)
chr6 (56-165)||(13391289-13391397)
chr6 (109-185)||(10312725-10312801)
chr6 (59-119)||(17114899-17114959)
chr6 (89-185)||(19230591-19230685)
chr6 (58-186)||(33939992-33940120)
[»] chr7 (53 HSPs)
chr7 (56-181)||(3353410-3353534)
chr7 (53-185)||(48804664-48804796)
chr7 (55-185)||(22973948-22974078)
chr7 (55-180)||(13095844-13095969)
chr7 (56-185)||(38578866-38578995)
chr7 (53-180)||(36619250-36619377)
chr7 (55-185)||(17748380-17748510)
chr7 (55-185)||(10047874-10048004)
chr7 (55-177)||(43861970-43862092)
chr7 (61-185)||(18785650-18785774)
chr7 (65-185)||(43925493-43925613)
chr7 (54-177)||(43346776-43346899)
chr7 (55-185)||(1797441-1797571)
chr7 (55-185)||(5069813-5069943)
chr7 (55-185)||(22993365-22993495)
chr7 (55-185)||(42032077-42032207)
chr7 (58-168)||(45960004-45960114)
chr7 (53-174)||(34659218-34659339)
chr7 (81-177)||(27875112-27875208)
chr7 (55-180)||(23658165-23658290)
chr7 (55-180)||(39420824-39420948)
chr7 (55-180)||(47341862-47341987)
chr7 (61-185)||(14535272-14535396)
chr7 (116-180)||(22268088-22268152)
chr7 (53-180)||(24969322-24969447)
chr7 (56-176)||(27028269-27028389)
chr7 (55-131)||(48551892-48551968)
chr7 (55-180)||(4195200-4195325)
chr7 (56-168)||(4973110-4973221)
chr7 (61-185)||(26423292-26423415)
chr7 (53-176)||(10317742-10317864)
chr7 (81-168)||(39474938-39475025)
chr7 (56-131)||(41945508-41945583)
chr7 (55-185)||(1605922-1606052)
chr7 (55-185)||(16802104-16802234)
chr7 (63-185)||(21530729-21530851)
chr7 (78-167)||(20247191-20247280)
chr7 (56-168)||(22573811-22573922)
chr7 (79-167)||(30827291-30827379)
chr7 (65-125)||(41267932-41267992)
chr7 (55-178)||(29151928-29152051)
chr7 (53-168)||(45697186-45697300)
chr7 (55-180)||(42210260-42210385)
chr7 (77-185)||(19914723-19914830)
chr7 (56-164)||(28396159-28396267)
chr7 (77-168)||(49142689-49142780)
chr7 (78-180)||(7774403-7774505)
chr7 (115-185)||(23823930-23824000)
chr7 (89-126)||(942612-942649)
chr7 (55-156)||(32823253-32823354)
chr7 (148-185)||(34127711-34127748)
chr7 (55-139)||(4228752-4228836)
chr7 (55-131)||(28744197-28744273)
[»] chr1 (63 HSPs)
chr1 (55-185)||(49078093-49078223)
chr1 (53-185)||(30927724-30927856)
chr1 (55-185)||(41663855-41663985)
chr1 (55-185)||(8763970-8764100)
chr1 (55-185)||(18915846-18915976)
chr1 (55-185)||(45361881-45362011)
chr1 (53-184)||(9659176-9659306)
chr1 (53-168)||(10422784-10422899)
chr1 (56-180)||(16263529-16263653)
chr1 (77-181)||(33498860-33498964)
chr1 (55-178)||(17642003-17642126)
chr1 (53-178)||(2980928-2981053)
chr1 (55-180)||(26325796-26325921)
chr1 (53-166)||(32142843-32142956)
chr1 (55-168)||(34697331-34697444)
chr1 (53-165)||(11397886-11397997)
chr1 (53-185)||(16956445-16956577)
chr1 (56-164)||(31576547-31576655)
chr1 (57-168)||(14254269-14254380)
chr1 (53-168)||(26660134-26660248)
chr1 (55-185)||(5855501-5855631)
chr1 (63-176)||(5504019-5504132)
chr1 (91-180)||(28324615-28324704)
chr1 (53-185)||(10172968-10173100)
chr1 (80-180)||(45726457-45726557)
chr1 (61-156)||(17092482-17092577)
chr1 (55-185)||(34719755-34719885)
chr1 (55-177)||(43959820-43959942)
chr1 (77-165)||(10336515-10336603)
chr1 (84-164)||(42710166-42710246)
chr1 (55-185)||(37339798-37339929)
chr1 (53-180)||(50503358-50503485)
chr1 (53-131)||(4581679-4581757)
chr1 (55-185)||(9853276-9853406)
chr1 (114-180)||(34334353-34334419)
chr1 (55-167)||(35908754-35908865)
chr1 (83-184)||(13265918-13266019)
chr1 (56-177)||(26258683-26258803)
chr1 (81-185)||(18649377-18649481)
chr1 (53-177)||(33418112-33418236)
chr1 (89-185)||(47312932-47313027)
chr1 (55-139)||(50094929-50095013)
chr1 (84-139)||(10507723-10507778)
chr1 (86-185)||(17988690-17988788)
chr1 (53-168)||(40288474-40288589)
chr1 (63-165)||(2567275-2567377)
chr1 (91-177)||(25165388-25165473)
chr1 (86-164)||(44969665-44969742)
chr1 (108-185)||(15238158-15238235)
chr1 (78-159)||(16150704-16150784)
chr1 (56-141)||(19195389-19195469)
chr1 (53-166)||(32150919-32151032)
chr1 (77-185)||(32850-32958)
chr1 (53-125)||(6899597-6899669)
chr1 (65-180)||(17358480-17358595)
chr1 (106-185)||(31734268-31734346)
chr1 (79-169)||(13262078-13262168)
chr1 (91-185)||(33004050-33004144)
chr1 (77-143)||(38791631-38791697)
chr1 (57-159)||(38859117-38859219)
chr1 (80-185)||(12036768-12036873)
chr1 (65-185)||(15465944-15466064)
chr1 (109-185)||(34877969-34878045)
[»] chr4 (68 HSPs)
chr4 (55-180)||(36145213-36145338)
chr4 (55-185)||(8889005-8889135)
chr4 (56-185)||(29895770-29895899)
chr4 (53-185)||(6779194-6779326)
chr4 (53-185)||(55921017-55921149)
chr4 (84-185)||(1446809-1446910)
chr4 (53-185)||(24166433-24166565)
chr4 (55-185)||(53599043-53599173)
chr4 (56-185)||(2559290-2559419)
chr4 (56-185)||(7246645-7246774)
chr4 (53-165)||(38075436-38075548)
chr4 (53-185)||(52950065-52950197)
chr4 (53-180)||(5472844-5472971)
chr4 (61-164)||(40780865-40780968)
chr4 (67-180)||(4736585-4736698)
chr4 (61-185)||(13073521-13073645)
chr4 (66-185)||(36262776-36262893)
chr4 (53-185)||(38166010-38166142)
chr4 (56-168)||(40272330-40272442)
chr4 (56-180)||(43458601-43458725)
chr4 (56-168)||(45721086-45721198)
chr4 (53-185)||(47078441-47078573)
chr4 (53-168)||(16645118-16645233)
chr4 (55-185)||(20128292-20128422)
chr4 (56-185)||(8064797-8064925)
chr4 (56-185)||(42722576-42722705)
chr4 (53-189)||(3159465-3159601)
chr4 (90-185)||(3574479-3574574)
chr4 (53-176)||(10541008-10541130)
chr4 (55-185)||(14858694-14858823)
chr4 (57-139)||(46108720-46108802)
chr4 (56-185)||(14123999-14124128)
chr4 (53-158)||(16450310-16450415)
chr4 (61-166)||(21429303-21429408)
chr4 (84-185)||(41339422-41339523)
chr4 (65-185)||(26479957-26480077)
chr4 (55-97)||(13436875-13436917)
chr4 (55-185)||(38168240-38168369)
chr4 (84-174)||(42722406-42722495)
chr4 (55-185)||(49260663-49260793)
chr4 (108-185)||(15732499-15732576)
chr4 (53-146)||(17080065-17080158)
chr4 (84-185)||(43468330-43468431)
chr4 (53-177)||(55005304-55005426)
chr4 (61-185)||(295537-295660)
chr4 (55-155)||(35359749-35359849)
chr4 (53-177)||(48015069-48015193)
chr4 (53-132)||(14597896-14597975)
chr4 (90-185)||(15839968-15840062)
chr4 (66-177)||(20421765-20421875)
chr4 (67-158)||(26237432-26237523)
chr4 (61-185)||(1940781-1940902)
chr4 (74-131)||(20354674-20354731)
chr4 (56-152)||(15829715-15829811)
chr4 (55-139)||(21192669-21192753)
chr4 (65-181)||(30317220-30317336)
chr4 (77-185)||(41162902-41163010)
chr4 (56-139)||(2687304-2687387)
chr4 (90-185)||(14567942-14568037)
chr4 (68-127)||(53354573-53354632)
chr4 (61-119)||(6032647-6032705)
chr4 (139-185)||(27531739-27531785)
chr4 (55-177)||(29588727-29588849)
chr4 (55-128)||(4738658-4738731)
chr4 (55-100)||(4986261-4986306)
chr4 (80-165)||(20532432-20532517)
chr4 (62-185)||(27248411-27248532)
chr4 (53-129)||(48834696-48834772)
[»] chr3 (68 HSPs)
chr3 (55-180)||(47219127-47219252)
chr3 (55-180)||(3136693-3136817)
chr3 (56-185)||(45877432-45877561)
chr3 (55-185)||(25294938-25295068)
chr3 (56-185)||(54261204-54261333)
chr3 (55-185)||(7328822-7328951)
chr3 (55-185)||(15320164-15320294)
chr3 (67-185)||(30767258-30767376)
chr3 (55-168)||(28572210-28572323)
chr3 (61-185)||(10040535-10040658)
chr3 (54-166)||(23511564-23511676)
chr3 (55-163)||(26043812-26043920)
chr3 (77-185)||(33251640-33251748)
chr3 (65-185)||(49198329-49198449)
chr3 (61-185)||(53649705-53649829)
chr3 (91-185)||(11687144-11687238)
chr3 (55-185)||(29127897-29128027)
chr3 (63-185)||(29135891-29136013)
chr3 (58-180)||(35923625-35923747)
chr3 (55-180)||(928583-928708)
chr3 (56-185)||(35315934-35316063)
chr3 (55-168)||(51060280-51060393)
chr3 (56-168)||(29762155-29762267)
chr3 (77-181)||(30045803-30045907)
chr3 (81-185)||(49543497-49543601)
chr3 (90-185)||(6462390-6462485)
chr3 (90-185)||(26207835-26207930)
chr3 (110-180)||(46529924-46529994)
chr3 (56-185)||(47471810-47471938)
chr3 (53-185)||(48341998-48342130)
chr3 (55-185)||(7310702-7310832)
chr3 (57-158)||(50405604-50405705)
chr3 (62-166)||(26361973-26362077)
chr3 (61-180)||(3507538-3507657)
chr3 (53-180)||(7650210-7650337)
chr3 (61-168)||(8362572-8362679)
chr3 (56-127)||(45450447-45450518)
chr3 (63-145)||(43330739-43330821)
chr3 (53-167)||(55069676-55069790)
chr3 (55-160)||(24506647-24506751)
chr3 (62-143)||(34374448-34374529)
chr3 (80-180)||(3755553-3755653)
chr3 (53-185)||(15795491-15795622)
chr3 (55-127)||(49021202-49021274)
chr3 (80-171)||(8164545-8164636)
chr3 (57-180)||(33688934-33689057)
chr3 (90-185)||(42412808-42412903)
chr3 (53-124)||(50753338-50753409)
chr3 (55-177)||(35998570-35998691)
chr3 (57-159)||(41223039-41223140)
chr3 (55-185)||(47749104-47749233)
chr3 (81-174)||(45402376-45402469)
chr3 (55-180)||(54237431-54237556)
chr3 (117-185)||(7612987-7613055)
chr3 (53-125)||(15285730-15285802)
chr3 (81-185)||(34662344-34662448)
chr3 (85-185)||(39849050-39849149)
chr3 (69-165)||(40944881-40944976)
chr3 (80-164)||(41630536-41630620)
chr3 (77-185)||(52364821-52364929)
chr3 (109-180)||(26590319-26590390)
chr3 (57-164)||(40660328-40660435)
chr3 (65-123)||(31138104-31138162)
chr3 (68-185)||(24146340-24146457)
chr3 (108-165)||(43738442-43738499)
chr3 (55-120)||(44064587-44064652)
chr3 (80-180)||(32873573-32873672)
chr3 (109-185)||(49082802-49082878)
[»] scaffold0002 (2 HSPs)
scaffold0002 (53-185)||(551-683)
scaffold0002 (55-185)||(319403-319533)
[»] chr5 (63 HSPs)
chr5 (55-185)||(42086306-42086436)
chr5 (55-185)||(5731918-5732048)
chr5 (55-185)||(9812851-9812981)
chr5 (55-185)||(12766110-12766240)
chr5 (55-168)||(1538427-1538540)
chr5 (55-176)||(39728375-39728496)
chr5 (53-185)||(8513498-8513630)
chr5 (80-184)||(14974347-14974451)
chr5 (77-185)||(15034054-15034162)
chr5 (55-165)||(9805003-9805113)
chr5 (55-185)||(12704993-12705123)
chr5 (55-184)||(20255349-20255478)
chr5 (53-185)||(12081887-12082019)
chr5 (61-185)||(37263220-37263343)
chr5 (50-185)||(25417176-25417311)
chr5 (53-168)||(38369696-38369810)
chr5 (55-185)||(13664239-13664369)
chr5 (55-185)||(19572703-19572833)
chr5 (77-174)||(14152040-14152137)
chr5 (53-185)||(7866560-7866692)
chr5 (56-180)||(14588616-14588740)
chr5 (55-166)||(23383655-23383766)
chr5 (53-180)||(35812994-35813121)
chr5 (55-185)||(41163458-41163587)
chr5 (55-165)||(18136274-18136388)
chr5 (80-157)||(22655180-22655257)
chr5 (55-180)||(23247350-23247474)
chr5 (108-185)||(28857107-28857184)
chr5 (55-139)||(39099777-39099861)
chr5 (61-177)||(42291509-42291625)
chr5 (62-185)||(11845806-11845929)
chr5 (61-168)||(20525834-20525941)
chr5 (90-185)||(30995100-30995195)
chr5 (55-164)||(21375352-21375460)
chr5 (55-168)||(42861216-42861329)
chr5 (56-167)||(2485194-2485304)
chr5 (109-180)||(4016307-4016378)
chr5 (53-184)||(20682613-20682744)
chr5 (62-177)||(41800964-41801079)
chr5 (55-180)||(3653912-3654035)
chr5 (63-180)||(7308370-7308487)
chr5 (56-185)||(20692912-20693041)
chr5 (55-180)||(38897717-38897841)
chr5 (115-185)||(1898980-1899050)
chr5 (53-131)||(9168249-9168327)
chr5 (53-131)||(14728116-14728194)
chr5 (53-103)||(38296726-38296776)
chr5 (53-121)||(14235710-14235778)
chr5 (90-177)||(22295203-22295290)
chr5 (53-168)||(40117411-40117526)
chr5 (55-185)||(30349558-30349688)
chr5 (53-131)||(43399161-43399239)
chr5 (148-185)||(6767142-6767179)
chr5 (86-139)||(7616945-7616998)
chr5 (56-157)||(24463885-24463986)
chr5 (68-157)||(24875352-24875441)
chr5 (116-185)||(25950641-25950710)
chr5 (108-185)||(35403563-35403640)
chr5 (108-185)||(38297015-38297092)
chr5 (116-165)||(40060295-40060344)
chr5 (55-120)||(40773317-40773382)
chr5 (88-184)||(7736851-7736947)
chr5 (80-120)||(27648448-27648488)
[»] scaffold0086 (1 HSPs)
scaffold0086 (56-185)||(26164-26293)
[»] chr2 (64 HSPs)
chr2 (55-180)||(34346285-34346410)
chr2 (56-180)||(39806884-39807008)
chr2 (53-180)||(25540400-25540527)
chr2 (55-185)||(7747252-7747382)
chr2 (80-180)||(331484-331584)
chr2 (56-180)||(19976806-19976930)
chr2 (56-180)||(38962746-38962870)
chr2 (57-185)||(39201508-39201636)
chr2 (61-180)||(2784916-2785034)
chr2 (77-180)||(3848934-3849037)
chr2 (62-185)||(37560151-37560274)
chr2 (67-185)||(10026626-10026744)
chr2 (55-185)||(41220613-41220743)
chr2 (53-156)||(16325602-16325705)
chr2 (55-185)||(8410109-8410239)
chr2 (55-185)||(10823038-10823168)
chr2 (55-185)||(15234059-15234189)
chr2 (55-185)||(22593113-22593241)
chr2 (55-185)||(38005380-38005510)
chr2 (55-185)||(41031904-41032033)
chr2 (56-185)||(16034915-16035044)
chr2 (62-180)||(6358156-6358274)
chr2 (67-165)||(10046487-10046584)
chr2 (55-157)||(24179575-24179676)
chr2 (55-169)||(25549722-25549836)
chr2 (61-168)||(20612538-20612647)
chr2 (67-180)||(34356189-34356302)
chr2 (53-170)||(44139477-44139594)
chr2 (61-185)||(10669570-10669694)
chr2 (56-168)||(14169608-14169720)
chr2 (53-185)||(18902526-18902658)
chr2 (56-184)||(35946718-35946845)
chr2 (53-185)||(42770647-42770779)
chr2 (53-180)||(11069861-11069988)
chr2 (53-180)||(29422198-29422325)
chr2 (55-185)||(2528339-2528469)
chr2 (55-185)||(3811689-3811819)
chr2 (57-179)||(7787040-7787162)
chr2 (55-173)||(12455300-12455418)
chr2 (90-167)||(18649059-18649136)
chr2 (56-180)||(9360747-9360871)
chr2 (56-168)||(12864219-12864331)
chr2 (53-180)||(3643883-3644010)
chr2 (55-130)||(20116610-20116685)
chr2 (55-185)||(13026409-13026539)
chr2 (79-185)||(41187687-41187793)
chr2 (53-170)||(20533111-20533228)
chr2 (108-185)||(21286422-21286499)
chr2 (62-143)||(28525460-28525541)
chr2 (53-166)||(28616375-28616488)
chr2 (56-157)||(44773270-44773370)
chr2 (80-180)||(2550851-2550951)
chr2 (1-37)||(25552905-25552941)
chr2 (90-185)||(21180347-21180442)
chr2 (55-158)||(34722685-34722788)
chr2 (55-141)||(26805318-26805404)
chr2 (90-180)||(30721888-30721978)
chr2 (108-185)||(15079461-15079538)
chr2 (60-141)||(20963113-20963194)
chr2 (108-168)||(45263718-45263778)
chr2 (108-179)||(33005736-33005806)
chr2 (81-168)||(14853389-14853478)
chr2 (108-180)||(2149245-2149318)
chr2 (53-118)||(34738329-34738394)
[»] chr8 (43 HSPs)
chr8 (53-185)||(3418509-3418641)
chr8 (61-185)||(15884560-15884683)
chr8 (81-180)||(33401823-33401922)
chr8 (55-185)||(14846558-14846687)
chr8 (53-185)||(9859991-9860124)
chr8 (53-180)||(45521156-45521282)
chr8 (55-180)||(14666069-14666194)
chr8 (53-185)||(17981423-17981555)
chr8 (61-180)||(4479300-4479418)
chr8 (55-185)||(2964058-2964188)
chr8 (55-185)||(8141084-8141214)
chr8 (55-180)||(10927593-10927718)
chr8 (65-186)||(26570905-26571026)
chr8 (55-185)||(2467116-2467246)
chr8 (56-185)||(68097-68226)
chr8 (56-185)||(2209765-2209894)
chr8 (53-170)||(43032898-43033015)
chr8 (56-185)||(44893277-44893406)
chr8 (55-186)||(583795-583924)
chr8 (56-164)||(18374013-18374121)
chr8 (53-169)||(43027303-43027419)
chr8 (81-180)||(6100459-6100558)
chr8 (57-180)||(11785903-11786025)
chr8 (108-185)||(13085506-13085583)
chr8 (55-185)||(24837224-24837354)
chr8 (73-159)||(29933780-29933866)
chr8 (56-165)||(8817035-8817144)
chr8 (108-185)||(38922465-38922542)
chr8 (84-168)||(6042820-6042904)
chr8 (108-180)||(34846801-34846872)
chr8 (50-166)||(36662406-36662521)
chr8 (81-180)||(1013001-1013100)
chr8 (53-168)||(8997540-8997655)
chr8 (57-148)||(13357956-13358047)
chr8 (86-185)||(34710596-34710695)
chr8 (55-120)||(993235-993300)
chr8 (96-165)||(28319314-28319383)
chr8 (80-180)||(22958757-22958857)
chr8 (90-166)||(33935768-33935844)
chr8 (56-166)||(23895569-23895679)
chr8 (63-141)||(24938568-24938646)
chr8 (91-176)||(10698961-10699046)
chr8 (77-142)||(35496275-35496340)
[»] scaffold0291 (1 HSPs)
scaffold0291 (53-168)||(6853-6968)
[»] scaffold0376 (1 HSPs)
scaffold0376 (56-185)||(12651-12780)
[»] scaffold0029 (1 HSPs)
scaffold0029 (63-167)||(41043-41147)
[»] scaffold0004 (2 HSPs)
scaffold0004 (63-180)||(7841-7958)
scaffold0004 (55-168)||(94978-95090)
[»] scaffold0170 (1 HSPs)
scaffold0170 (66-185)||(9826-9945)
[»] scaffold0016 (1 HSPs)
scaffold0016 (55-166)||(8699-8810)
[»] scaffold0209 (1 HSPs)
scaffold0209 (55-186)||(12555-12684)
[»] scaffold0024 (1 HSPs)
scaffold0024 (53-155)||(149396-149498)
[»] scaffold0316 (1 HSPs)
scaffold0316 (53-177)||(1610-1734)
[»] scaffold0079 (1 HSPs)
scaffold0079 (109-185)||(8156-8231)
[»] scaffold0009 (2 HSPs)
scaffold0009 (56-174)||(42831-42949)
scaffold0009 (53-180)||(9422-9556)
[»] scaffold0005 (3 HSPs)
scaffold0005 (53-132)||(219403-219482)
scaffold0005 (90-185)||(249338-249433)
scaffold0005 (108-185)||(271125-271202)
[»] scaffold0384 (1 HSPs)
scaffold0384 (50-180)||(5959-6088)
[»] scaffold0006 (1 HSPs)
scaffold0006 (61-185)||(68498-68619)
[»] scaffold0010 (1 HSPs)
scaffold0010 (55-155)||(155709-155809)
[»] scaffold0050 (1 HSPs)
scaffold0050 (90-167)||(72631-72708)
[»] scaffold0011 (1 HSPs)
scaffold0011 (56-185)||(224298-224427)


Alignment Details
Target: chr6 (Bit Score: 71; Significance: 3e-32; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 55 - 185
Target Start/End: Original strand, 6606095 - 6606225
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| ||||||||||| ||| || ||| ||||||||||||||||| || || |||||||||||| ||||||||||| ||||||| ||| ||||||||||    
T  6606095 gctttcgcaccggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgtacactggccaagtgttgttccccctgagaatcga 6606194  T
Q  155 acccggtattccccaggtacgtccttagaag 185  Q
    |||||||||||||| | ||||||||| ||||    
T  6606195 acccggtattccccggatacgtccttggaag 6606225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 53 - 185
Target Start/End: Original strand, 5253219 - 5253351
Alignment:
Q  53 ttgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatc 152  Q
    ||||||| ||||||||||| ||| || ||||||||| ||| ||||||| || || ||||||||||||| |||||||||| ||||||| ||| || |||||    
T  5253219 ttgctttcgcaccggtttccgacccaccaaaggtgggcgattaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatc 5253318  T
Q  153 gaacccggtattccccaggtacgtccttagaag 185  Q
    |||||||||||||||| ||||||||||| ||||    
T  5253319 gaacccggtattccccgggtacgtccttggaag 5253351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 53 - 185
Target Start/End: Original strand, 34954615 - 34954747
Alignment:
Q  53 ttgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatc 152  Q
    ||||||| |||  |||||| ||| |||||||||||||||||||||| | || || |||||||| |||  ||||||||||| |||||| ||| ||||||||    
T  34954615 ttgctttcgcattggtttccgacccatcaaaggtggacgactaatctggctcatgcgtagaggtatgtgcactggccaaacgttgttccccctgagaatc 34954714  T
Q  153 gaacccggtattccccaggtacgtccttagaag 185  Q
    ||||| |||||||||||||||||||||| ||||    
T  34954715 gaacctggtattccccaggtacgtccttggaag 34954747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 55 - 185
Target Start/End: Original strand, 8611972 - 8612102
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| ||||||||||||||| || ||||||||| |||||||||||  | || |||||| ||||||||||||| |||  |||||| | | |  |||||||    
T  8611972 gctttcgcaccggtttctgacccaccaaaggtgggcgactaatccggttcatgcgtagaagcatgcacactggtcaagcgttgttcctcctcggaatcga 8612071  T
Q  155 acccggtattccccaggtacgtccttagaag 185  Q
    |||||||||||||| ||||||||||| ||||    
T  8612072 acccggtattccccgggtacgtccttggaag 8612102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 55 - 185
Target Start/End: Complemental strand, 21898760 - 21898630
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| ||||||||||| ||| ||  ||||||| |||||||||||| || || ||||||||||||| ||||||||||  |||||| | | || |||||||    
T  21898760 gctttcgcaccggtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctgggaatcga 21898661  T
Q  155 acccggtattccccaggtacgtccttagaag 185  Q
    |||||||||||||| | ||||||||| ||||    
T  21898660 acccggtattccccggatacgtccttggaag 21898630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 53 - 185
Target Start/End: Original strand, 13036000 - 13036132
Alignment:
Q  53 ttgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatc 152  Q
    ||||||| ||||||||||| ||| || |||  |||||||||||||| | || || ||||||||||||| |||||||||| ||||||| ||| ||| ||||    
T  13036000 ttgctttcgcaccggtttccgacccaccaatagtggacgactaatctggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgaaaatc 13036099  T
Q  153 gaacccggtattccccaggtacgtccttagaag 185  Q
    ||||||| ||||||||   ||||||||| ||||    
T  13036100 gaacccgatattccccgaatacgtccttggaag 13036132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 53 - 168
Target Start/End: Complemental strand, 3601198 - 3601083
Alignment:
Q  53 ttgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatc 152  Q
    ||||||| ||||||||||| ||| || ||||||||||||||||||||| ||  |  ||| |||||||| ||||||||||  |||||| ||| ||||||||    
T  3601198 ttgctttcgcaccggtttccgacccaccaaaggtggacgactaatccggctcgtgtgtataggcatgcgcactggccaagcgttgttccccctgagaatc 3601099  T
Q  153 gaacccggtattcccc 168  Q
    ||| ||||||||||||    
T  3601098 gaaaccggtattcccc 3601083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 55 - 185
Target Start/End: Complemental strand, 8932773 - 8932643
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| ||||||||||| ||| ||||||||||||  || ||||||| || || ||||||||||||| |||| ||||| ||||||| ||| || |||||||    
T  8932773 gctttcgcaccggtttccgacccatcaaaggtgggtgattaatccggctcatgcgtagaggcatgcgcactagccaagtgttgttccccctgggaatcga 8932674  T
Q  155 acccggtattccccaggtacgtccttagaag 185  Q
    ||||| |||||||| | ||| ||||| ||||    
T  8932673 acccgatattccccggatacatccttggaag 8932643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 55 - 185
Target Start/End: Complemental strand, 8944239 - 8944109
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| ||||||||||| ||| ||||||||||||  || ||||||| || || ||||||||||||| |||| ||||| ||||||| ||| || |||||||    
T  8944239 gctttcgcaccggtttccgacccatcaaaggtgggtgattaatccggctcatgcgtagaggcatgcgcactagccaagtgttgttccccctgggaatcga 8944140  T
Q  155 acccggtattccccaggtacgtccttagaag 185  Q
    ||||| |||||||| | ||| ||||| ||||    
T  8944139 acccgatattccccggatacatccttggaag 8944109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 57 - 185
Target Start/End: Original strand, 2271303 - 2271429
Alignment:
Q  57 ttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaac 156  Q
    |||||||| |||||||||| |||||||||||||||||||||||| ||  | ||||||| ||||| ||||||| ||  ||||||  |  ||||||||||||    
T  2271303 ttttgcactggtttctgacccatcaaaggtggacgactaatccggctcgtgcgtagagacatgcgcactggctaagcgttgtt--ctctgagaatcgaac 2271400  T
Q  157 ccggtattccccaggtacgtccttagaag 185  Q
    ||||||||||||   ||||||||| ||||    
T  2271401 ccggtattccccgaatacgtccttggaag 2271429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 55 - 180
Target Start/End: Complemental strand, 19089610 - 19089485
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| ||||||||||| ||| || ||||||| ||||||||||||| ||  | ||||||||||||| |||||||||| ||||||| ||| || ||||| |    
T  19089610 gctttcgcaccggtttccgacccaccaaaggtagacgactaatccggctcgtgcgtagaggcatgctcactggccaagtgttgttccccctgggaatcaa 19089511  T
Q  155 acccggtattccccaggtacgtcctt 180  Q
    ||| |||||||| | | |||||||||    
T  19089510 acctggtattcctcggatacgtcctt 19089485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 77 - 181
Target Start/End: Complemental strand, 8888972 - 8888868
Alignment:
Q  77 catcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccaggtacgt 176  Q
    ||||||||||||||||||||||||||| || |||||||| |||| ||||||||||| |||||||||| | | |||||||  || |||||||  | |||||    
T  8888972 catcaaaggtggacgactaatccgactcatgcgtagaggtatgcgcactggccaaacgttgtttcccttaaaaatcgaattcgatattccctggatacgt 8888873  T
Q  177 cctta 181  Q
    |||||    
T  8888872 cctta 8888868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 80 - 180
Target Start/End: Original strand, 9179759 - 9179859
Alignment:
Q  80 caaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccaggtacgtcct 179  Q
    ||||||||||||||||||||  || || |||||||| ||||| ||||| ||| ||||||| ||| || ||||||||||||||||||||  ||||||||||    
T  9179759 caaaggtggacgactaatccagctcatgcgtagaggtatgcatactggtcaagtgttgttccccctgggaatcgaacccggtattccctgggtacgtcct 9179858  T
Q  180 t 180  Q
    |    
T  9179859 t 9179859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 89 - 180
Target Start/End: Complemental strand, 9147379 - 9147288
Alignment:
Q  89 acgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccaggtacgtcctt 180  Q
    |||||||||||| ||||| ||||||||||||  |||||| ||| ||| ||| ||| || |||||||||||| ||||||||||||||||||||    
T  9147379 acgactaatccggcttatgcgtagaggcatgtgcactggtcaagtgtcgttccccctgggaatcgaacccgatattccccaggtacgtcctt 9147288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 77 - 180
Target Start/End: Original strand, 24671886 - 24671989
Alignment:
Q  77 catcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccaggtacgt 176  Q
    ||||||||| |||| ||||||||| ||| | |||||||||||||||||||| ||| ||||||| ||  || |||| ||||||||||||| |||| |||||    
T  24671886 catcaaaggcggactactaatccggcttgtgcgtagaggcatgcacactggtcaagtgttgttccctctgggaatagaacccggtattctccagatacgt 24671985  T
Q  177 cctt 180  Q
    ||||    
T  24671986 cctt 24671989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 55 - 185
Target Start/End: Original strand, 30788851 - 30788979
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| ||||||||||| ||| || ||||||||| ||||||||||| ||  | | ||||||||||| ||||||||||| ||||||  ||||||||||| |    
T  30788851 gctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcctagaggcatgcgcactggccaaacgttgtt--ccatgagaatcaa 30788948  T
Q  155 acccggtattccccaggtacgtccttagaag 185  Q
    ||||| |||||||| | ||| ||||| ||||    
T  30788949 acccgatattccccggatacatccttggaag 30788979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 55 - 185
Target Start/End: Complemental strand, 12635926 - 12635796
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| ||||||||||| ||| || |||  |||| ||||||||||| ||| | ||||||||||||| |||| |||||  |||||||||| || ||||| |    
T  12635926 gctttcgcaccggtttccgacccaccaatagtgggcgactaatccggcttgtgcgtagaggcatgcgcactagccaagcgttgtttcccctgggaatcaa 12635827  T
Q  155 acccggtattccccaggtacgtccttagaag 185  Q
    ||| |||||||||| | ||||||||| ||||    
T  12635826 acctggtattccccggatacgtccttggaag 12635796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 80 - 185
Target Start/End: Original strand, 29333162 - 29333266
Alignment:
Q  80 caaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccaggtacgtcct 179  Q
    ||||||||||||||| || || || || ||||||||||||| ||||||||||| |||| ||||| ||  |||||||||||||||||||  ||||||||||    
T  29333162 caaaggtggacgactgattcggctcatgcgtagaggcatgcgcactggccaaacgttg-ttcccctggaaatcgaacccggtattccctgggtacgtcct 29333260  T
Q  180 tagaag 185  Q
    | ||||    
T  29333261 tggaag 29333266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 55 - 159
Target Start/End: Complemental strand, 5029929 - 5029825
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| ||||| ||||| ||| |||||||| ||| |||||||||| ||| || ||||||||||||| ||||| ||||| ||||||  || ||||||||||    
T  5029929 gctttcgcaccagtttccgacccatcaaagatgggcgactaatccaactcatgcgtagaggcatgcgcactgaccaaacgttgttctccctgagaatcga 5029830  T
Q  155 acccg 159  Q
    |||||    
T  5029829 acccg 5029825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 61 - 180
Target Start/End: Complemental strand, 11142709 - 11142590
Alignment:
Q  61 gcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccgg 160  Q
    |||||||| || ||| || ||||| ||||| ||||||| |||| || ||||||||||||| |||||| |||| |||||||||  || ||||||||| |||    
T  11142709 gcaccggtctccgacccaccaaagttggacaactaatctgactcatgcgtagaggcatgcgcactggtcaaacgttgtttccactgcgaatcgaactcgg 11142610  T
Q  161 tattccccaggtacgtcctt 180  Q
    |||| ||| |||| ||||||    
T  11142609 tatttcccgggtatgtcctt 11142590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 55 - 142
Target Start/End: Complemental strand, 21873015 - 21872928
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcc 142  Q
    |||||||||| |||||| ||| ||||||||||||||||||||||| |||  |||||| | |||||  || ||||||||||||||||||    
T  21873015 gcttttgcactggtttccgacccatcaaaggtggacgactaatccaactcgtacgtaaaagcatgtgcattggccaaatgttgtttcc 21872928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 185
Target Start/End: Complemental strand, 12606542 - 12606412
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| |||||||||||   |||| ||||||||| ||||||||||| ||  | ||||||||||||| ||||||||||| |||||| ||| ||  ||||||    
T  12606542 gctttcgcaccggtttccagctcaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaaacgttgttccccctggaaatcga 12606443  T
Q  155 acccggtattccccaggtacgtccttagaag 185  Q
    | | |||||||||| | ||||| ||| ||||    
T  12606442 atctggtattccccggatacgttcttggaag 12606412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 168
Target Start/End: Complemental strand, 8938822 - 8938710
Alignment:
Q  56 cttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaa 155  Q
    |||| ||||||||||| ||| ||||||||||||||||||||| || || || |||||| || ||| |||||| ||| ||||||| | | || ||||||||    
T  8938822 ctttcgcaccggtttccgacccatcaaaggtggacgactaattcggctcatgcgtagatgcttgcgcactggtcaagtgttgttcctcctgggaatcgaa 8938723  T
Q  156 cccggtattcccc 168  Q
    ||  |||||||||    
T  8938722 ccaagtattcccc 8938710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 55 - 131
Target Start/End: Original strand, 14783418 - 14783494
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaa 131  Q
    ||||| ||||||||||| ||| || ||| ||||||||||||||||| || || |||||||||||||||||| |||||    
T  14783418 gctttcgcaccggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcacactagccaa 14783494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 56 - 180
Target Start/End: Original strand, 2105092 - 2105213
Alignment:
Q  56 cttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaa 155  Q
    |||| ||| ||||||| ||| ||| ||| |||  ||||||||||||||| |||||||||||   || |||||||||  |||||||||| |   |||||||    
T  2105092 ctttcgcatcggtttccgacccataaaaagtgagcgactaatccgacttgtacgtagaggc---catactggccaagcgttgtttcccctagaaatcgaa 2105188  T
Q  156 cccggtattccccaggtacgtcctt 180  Q
    ||||||||| ||| |||||||||||    
T  2105189 cccggtatttcccgggtacgtcctt 2105213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 177
Target Start/End: Original strand, 29444775 - 29444885
Alignment:
Q  67 gtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattcc 166  Q
    ||||| ||| || ||||| ||||| ||||||||| || || ||||||||||||| ||||||||||  |||||| ||| |   ||||||||||||||| ||    
T  29444775 gtttccgacccaccaaagatggacaactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttccccctagaaatcgaacccggtatccc 29444874  T
Q  167 ccaggtacgtc 177  Q
    || ||||||||    
T  29444875 ccgggtacgtc 29444885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 77 - 165
Target Start/End: Original strand, 3587965 - 3588053
Alignment:
Q  77 catcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattc 165  Q
    |||||||||| |||||||||||||  | || |||||||| |||  ||||||||||  |||||| ||| || ||||||||||||||||||    
T  3587965 catcaaaggttgacgactaatccggttcatgcgtagaggtatgtgcactggccaagcgttgttccccttgggaatcgaacccggtattc 3588053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 55 - 131
Target Start/End: Original strand, 9633623 - 9633699
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaa 131  Q
    ||||| ||||||||||| ||| || ||||||||| ||||||||||| ||  | ||||||||||||| ||||||||||    
T  9633623 gctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaa 9633699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 180
Target Start/End: Complemental strand, 31129291 - 31129164
Alignment:
Q  53 ttgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatc 152  Q
    ||||||| ||||||||||| |||||| |||||||| || ||||||| | || || ||||||||||||| |||| |||||  |||| | ||| || ||||     
T  31129291 ttgctttcgcaccggtttccgactcaccaaaggtgcacaactaatctggctcatgcgtagaggcatgcgcactagccaagcgttgctccccctgtgaatt 31129192  T
Q  153 gaacccggtattccccaggtacgtcctt 180  Q
    |||  | ||||| | |||||||||||||    
T  31129191 gaattcagtattgctcaggtacgtcctt 31129164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 164
Target Start/End: Original strand, 33859355 - 33859426
Alignment:
Q  93 ctaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtatt 164  Q
    ||||||||||| || ||||||||||||| |||||| |||| |||||| ||| | | ||||||||||||||||    
T  33859355 ctaatccgactaatgcgtagaggcatgcgcactgggcaaacgttgttccccctaaaaatcgaacccggtatt 33859426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 185
Target Start/End: Original strand, 10311520 - 10311597
Alignment:
Q  108 cgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccaggtacgtccttagaag 185  Q
    ||||||| ||||| ||||||||||  |||||| ||| |||| ||||||||||||||||||| | ||||| ||| ||||    
T  10311520 cgtagagacatgcgcactggccaagcgttgttccccttgaggatcgaacccggtattccccggatacgttcttggaag 10311597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 178
Target Start/End: Original strand, 21016804 - 21016872
Alignment:
Q  110 tagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccaggtacgtcc 178  Q
    ||||||||||||||||| | || |||||||  || |  ||||||||||||||||||||| |||||||||    
T  21016804 tagaggcatgcacactgactaagtgttgttctccttaggaatcgaacccggtattccccgggtacgtcc 21016872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 168
Target Start/End: Original strand, 14107391 - 14107469
Alignment:
Q  90 cgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattcccc 168  Q
    ||||||||||| || || ||||||||||||  |||||| |||  |||||| | | || |||||||||||||||||||||    
T  14107391 cgactaatccggctcatgcgtagaggcatgtgcactggtcaagcgttgttcctcctgggaatcgaacccggtattcccc 14107469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 165
Target Start/End: Complemental strand, 13391397 - 13391289
Alignment:
Q  56 cttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaa 155  Q
    |||||||||||||||  ||| ||| |||  ||| ||||||||||| ||  | ||||||||||||| |||||||||||  ||| ||||| ||| |||||||    
T  13391397 cttttgcaccggttttcgacccattaaatatgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaaacattg-ttcccctgaaaatcgaa 13391299  T
Q  156 cccggtattc 165  Q
     ||| |||||    
T  13391298 tccgatattc 13391289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 109 - 185
Target Start/End: Complemental strand, 10312801 - 10312725
Alignment:
Q  109 gtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccaggtacgtccttagaag 185  Q
    ||||||||||||||| || ||||| ||| ||  || || ||||||||||||||||| |||||||  |||||| ||||    
T  10312801 gtagaggcatgcacattgcccaaacgttattctccctgggaatcgaacccggtatttcccaggtttgtccttggaag 10312725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 59 - 119
Target Start/End: Original strand, 17114899 - 17114959
Alignment:
Q  59 ttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatg 119  Q
    |||||||| |||| |||  ||||||||||| ||||||||||| || || ||||||||||||    
T  17114899 ttgcaccgatttccgacctatcaaaggtgggcgactaatccggctcatgcgtagaggcatg 17114959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 185
Target Start/End: Original strand, 19230591 - 19230685
Alignment:
Q  89 acgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccaggtacgtccttagaag 185  Q
    |||||||||||| ||  | |||||||||||||| |||| ||||  |||| ||||| ||| ||||||| ||||||||||| | |||||||||| ||||    
T  19230591 acgactaatccggctcgtgcgtagaggcatgcatactgaccaagcgttg-ttcccttgaaaatcgaatccggtattcccga-gtacgtccttggaag 19230685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 186
Target Start/End: Complemental strand, 33940120 - 33939992
Alignment:
Q  58 tttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacc 157  Q
    ||||| |||||||  ||| | |||||| ||||||||||||||| ||  |  |||||||||||| || |||  || | ||||| | | |||||||| ||||    
T  33940120 tttgctccggttttcgacccgtcaaagatggacgactaatccggctcgtgtgtagaggcatgcgcaatggttaagtattgttcctcctgagaatcaaacc 33940021  T
Q  158 cggtattccccaggtacgtccttagaagt 186  Q
    | ||||||| | | |||||||||||||||    
T  33940020 cagtattcctcggatacgtccttagaagt 33939992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 70; Significance: 1e-31; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 56 - 181
Target Start/End: Complemental strand, 3353534 - 3353410
Alignment:
Q  56 cttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaa 155  Q
    |||| ||||||||||||||  |||||||||||||||||||||||| ||  | ||||||||||||| |||||||||||||||||||||| ||||||||||     
T  3353534 ctttcgcaccggtttctgatccatcaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaaatgttgtttccc-tgagaatcgat 3353436  T
Q  156 cccggtattccccaggtacgtcctta 181  Q
    |||| ||||||| || ||||||||||    
T  3353435 cccgatattccctagatacgtcctta 3353410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 53 - 185
Target Start/End: Complemental strand, 48804796 - 48804664
Alignment:
Q  53 ttgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatc 152  Q
    ||||||| ||||||||||| ||| || ||| ||||||||||||||||| || || ||||||||||||| |||||||||| ||||||| ||| || |||||    
T  48804796 ttgctttcgcaccggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccttgggaatc 48804697  T
Q  153 gaacccggtattccccaggtacgtccttagaag 185  Q
    |||||||||||||||| | ||||||||| ||||    
T  48804696 gaacccggtattccccggatacgtccttggaag 48804664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 55 - 185
Target Start/End: Complemental strand, 22974078 - 22973948
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| || |||||||||||| || ||||||||||||||||||| | || || |||||| |||||||||||||||||  |||||| ||| ||||||||||    
T  22974078 gctttcgcgccggtttctgacccaccaaaggtggacgactaatctggctcatgcgtagacgcatgcacactggccaagcgttgttccccctgagaatcga 22973979  T
Q  155 acccggtattccccaggtacgtccttagaag 185  Q
    ||||||||||||||  |||||||||| ||||    
T  22973978 acccggtattccccgagtacgtccttggaag 22973948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 55 - 180
Target Start/End: Complemental strand, 13095969 - 13095844
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||||||||||||||| ||| || ||||||||  ||||||||||| || || ||||||||||||| |||||||||| ||||||| ||| || |||| ||    
T  13095969 gcttttgcaccggtttccgacccaccaaaggtgagcgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaataga 13095870  T
Q  155 acccggtattccccaggtacgtcctt 180  Q
    |||||||||||||| |||||||||||    
T  13095869 acccggtattccccgggtacgtcctt 13095844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 56 - 185
Target Start/End: Original strand, 38578866 - 38578995
Alignment:
Q  56 cttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaa 155  Q
    |||| ||||||||||| ||| || ||||||||| ||||||||||| || || ||||||||||||| ||||||||||  |||||| ||| || ||||||||    
T  38578866 ctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttccccctgggaatcgaa 38578965  T
Q  156 cccggtattccccaggtacgtccttagaag 185  Q
    |||| |||||||| ||||||||||| ||||    
T  38578966 cccgatattccccgggtacgtccttggaag 38578995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 53 - 180
Target Start/End: Original strand, 36619250 - 36619377
Alignment:
Q  53 ttgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatc 152  Q
    |||||||  ||| ||||| |||| || ||| ||||||||||||||||| || || |||||||||||||||||||| ||| ||||||| ||| || |||||    
T  36619250 ttgctttcacactggtttttgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcacactggacaagtgttgttccccctgggaatc 36619349  T
Q  153 gaacccggtattccccaggtacgtcctt 180  Q
    |||||||||||||||||  |||||||||    
T  36619350 gaacccggtattccccaaatacgtcctt 36619377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 55 - 185
Target Start/End: Original strand, 17748380 - 17748510
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| ||| ||||||| ||| || ||||||||||||||||||||| ||  ||||||||||||||| ||||||||||  |||||| ||| || |||||||    
T  17748380 gctttcgcatcggtttccgacccaacaaaggtggacgactaatccggctcgtacgtagaggcatgcgcactggccaagcgttgttccccctgggaatcga 17748479  T
Q  155 acccggtattccccaggtacgtccttagaag 185  Q
    ||||||||||||||   ||||||||| ||||    
T  17748480 acccggtattccccgaatacgtccttggaag 17748510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 55 - 185
Target Start/End: Original strand, 10047874 - 10048004
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| ||||||||||| ||| || ||| |||||||||||||| |  || || ||||||||| ||| |||||||||| ||||||| ||| || |||||||    
T  10047874 gctttcgcaccggtttccgacccaccaatggtggacgactaattctgctcatgcgtagaggcctgcgcactggccaagtgttgttccccctgggaatcga 10047973  T
Q  155 acccggtattccccaggtacgtccttagaag 185  Q
    |||||||||||||| | ||||||||| ||||    
T  10047974 acccggtattccccggatacgtccttggaag 10048004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 55 - 177
Target Start/End: Original strand, 43861970 - 43862092
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| ||||||||||  ||  || |||||||| | |||||||||| || || ||||||||||||| ||||||||||| |||||| ||| || |||||||    
T  43861970 gctttcgcaccggttttcgatccaccaaaggtgaatgactaatccggctcatgcgtagaggcatgcgcactggccaaacgttgttccccctgggaatcga 43862069  T
Q  155 acccggtattccccaggtacgtc 177  Q
    |||||||||||||||| ||||||    
T  43862070 acccggtattccccagatacgtc 43862092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 61 - 185
Target Start/End: Complemental strand, 18785774 - 18785650
Alignment:
Q  61 gcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccgg 160  Q
    ||||||||||| ||| || || ||||| |||||||||||   | || ||||||||||||| |||||||||| ||||||| ||| |  |||||||||||||    
T  18785774 gcaccggtttccgacccaccagaggtgaacgactaatccagttcatgcgtagaggcatgcgcactggccaagtgttgttccccctaggaatcgaacccgg 18785675  T
Q  161 tattccccaggtacgtccttagaag 185  Q
    |||||||| ||||||||||| ||||    
T  18785674 tattccccgggtacgtccttggaag 18785650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 65 - 185
Target Start/End: Complemental strand, 43925613 - 43925493
Alignment:
Q  65 cggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtatt 164  Q
    ||||||||||  ||||||||||  || ||||||||  || || ||||||||||||| ||||| |||| ||||||| ||| || |||||||||||||||||    
T  43925613 cggtttctgatccatcaaaggtaaacaactaatccagctcatgcgtagaggcatgcgcactgaccaagtgttgttccccctgggaatcgaacccggtatt 43925514  T
Q  165 ccccaggtacgtccttagaag 185  Q
    |||| ||||||||||| ||||    
T  43925513 ccccgggtacgtccttggaag 43925493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 54 - 177
Target Start/End: Original strand, 43346776 - 43346899
Alignment:
Q  54 tgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcg 153  Q
    |||||| |||| |||||| ||| || ||||| ||  ||||||||||| ||  ||||||||||||||| ||| |||||| ||||||| ||| ||||||| |    
T  43346776 tgctttcgcactggtttccgacccaccaaagatgagcgactaatccggctcgtacgtagaggcatgcgcaccggccaagtgttgttccccttgagaattg 43346875  T
Q  154 aacccggtattccccaggtacgtc 177  Q
    ||||||||||||||||| ||||||    
T  43346876 aacccggtattccccagatacgtc 43346899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 55 - 185
Target Start/End: Complemental strand, 1797571 - 1797441
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||||||||||||||  ||  |||||||| |||||||||| |||| ||  | ||||||| ||||| ||||||||||  |||||||||| || |||||||    
T  1797571 gcttttgcaccggttttcgatccatcaaagatggacgactagtccggctcgtgcgtagagacatgcgcactggccaagcgttgtttcccctgggaatcga 1797472  T
Q  155 acccggtattccccaggtacgtccttagaag 185  Q
    |||||||||||| | | ||||||||| ||||    
T  1797471 acccggtattcctcggatacgtccttggaag 1797441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 55 - 185
Target Start/End: Original strand, 5069813 - 5069943
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| ||| ||||||| ||| || ||||||||| ||||||||||| ||| | |||||||||||||||||| || ||  |||||| | | ||  ||||||    
T  5069813 gctttcgcatcggtttccgacccaccaaaggtgggcgactaatccggcttgtgcgtagaggcatgcacactagctaagcgttgttcctcctggaaatcga 5069912  T
Q  155 acccggtattccccaggtacgtccttagaag 185  Q
    |||||||||| ||| ||||||||||||||||    
T  5069913 acccggtatttcccgggtacgtccttagaag 5069943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 55 - 185
Target Start/End: Original strand, 22993365 - 22993495
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| ||||||||||||||| || ||||||||  |||||||||||  |  | ||||||||||||||||||||||||  |||||| | | |  |||||||    
T  22993365 gctttcgcaccggtttctgacccaccaaaggtgagcgactaatccggttcgtgcgtagaggcatgcacactggccaagcgttgttcctcctcggaatcga 22993464  T
Q  155 acccggtattccccaggtacgtccttagaag 185  Q
    ||||| |||||||| ||||||||||| ||||    
T  22993465 acccgatattccccgggtacgtccttggaag 22993495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 55 - 185
Target Start/End: Complemental strand, 42032207 - 42032077
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| ||| ||||||| ||| |||||||||||||| |||||| || || || |||||| | |||  ||||||||||| |||||| ||| || |||||||    
T  42032207 gctttagcatcggtttccgacccatcaaaggtggacaactaattcggctcatgcgtagatgtatgtgcactggccaaacgttgttccccgtgggaatcga 42032108  T
Q  155 acccggtattccccaggtacgtccttagaag 185  Q
    ||| |||||||||| ||||||||||| ||||    
T  42032107 accaggtattccccgggtacgtccttggaag 42032077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 58 - 168
Target Start/End: Original strand, 45960004 - 45960114
Alignment:
Q  58 tttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacc 157  Q
    |||||||||||||| ||  |||||||||||  ||||||||||| ||||| ||||||||||||| ||||| |||| ||||||| ||| || ||||| |||     
T  45960004 tttgcaccggtttccgatccatcaaaggtgagcgactaatccggcttatgcgtagaggcatgcgcactgaccaagtgttgttgcccttgggaatcaaact 45960103  T
Q  158 cggtattcccc 168  Q
    |||||||||||    
T  45960104 cggtattcccc 45960114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 174
Target Start/End: Complemental strand, 34659339 - 34659218
Alignment:
Q  53 ttgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatc 152  Q
    ||||||| ||||||||||  ||| || ||| ||||| ||||||||||| ||  | ||||||||||||| |||||| |||  |||||| ||| ||||||||    
T  34659339 ttgctttcgcaccggttttcgacacaccaatggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggtcaagcgttgttccccttgagaatc 34659240  T
Q  153 gaacccggtattccccaggtac 174  Q
    |||||||||||||||| |||||    
T  34659239 gaacccggtattccccgggtac 34659218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 81 - 177
Target Start/End: Original strand, 27875112 - 27875208
Alignment:
Q  81 aaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccaggtacgtc 177  Q
    ||||||||||||||||| ||||| || ||||||||||||  |||||||||| |||| || ||| || |||||||| |||||||||||||| ||||||    
T  27875112 aaaggtggacgactaatgcgactcatgcgtagaggcatgtgcactggccaagtgttattccccctgggaatcgaatccggtattccccagatacgtc 27875208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 55 - 180
Target Start/End: Complemental strand, 23658290 - 23658165
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    |||||||||| |||||||||| || ||||| ||||||||||||||| ||  |  |||||||||||||||||||||||  |||||| ||| ||  ||||||    
T  23658290 gcttttgcacaggtttctgacccaccaaagatggacgactaatccggctcgtgtgtagaggcatgcacactggccaagcgttgttccccctggaaatcga 23658191  T
Q  155 acccggtattccccaggtacgtcctt 180  Q
    ||  | |||||||  |||||||||||    
T  23658190 actggatattccctgggtacgtcctt 23658165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 55 - 180
Target Start/End: Complemental strand, 39420948 - 39420824
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||||||||||||||| | | |||||||||| ||||||||||||| || || |||||||||| || ||||||||||  |||||| ||  || || ||||    
T  39420948 gcttttgcaccggtttccggcccatcaaaggtagacgactaatccggctcatgcgtagaggcacgcgcactggccaagcgttgttccctttgggattcga 39420849  T
Q  155 acccggtattccccaggtacgtcctt 180  Q
    | |||||||||||| ||||| |||||    
T  39420848 a-ccggtattccccgggtacctcctt 39420824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 55 - 180
Target Start/End: Complemental strand, 47341987 - 47341862
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| |||||| |||| ||| || ||| |||| ||||| |||||  ||  | ||||||||||||| |||||||||| ||||||| ||| || |||||||    
T  47341987 gctttcgcaccgatttccgacccaccaatggtgaacgaccaatcctgctcgtgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcga 47341888  T
Q  155 acccggtattccccaggtacgtcctt 180  Q
    || ||||||||||| |||||||||||    
T  47341887 actcggtattccccgggtacgtcctt 47341862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 61 - 185
Target Start/End: Complemental strand, 14535396 - 14535272
Alignment:
Q  61 gcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccgg 160  Q
    ||||| ||||||||| |||||| ||||| ||||||||||  ||  | |||||||||||||||||||||||| |||||||  || ||| |||  |||||||    
T  14535396 gcaccagtttctgacccatcaatggtgggcgactaatccagctcgtgcgtagaggcatgcacactggccaagtgttgttctccctgaaaatgaaacccgg 14535297  T
Q  161 tattccccaggtacgtccttagaag 185  Q
    |||||||   |||||||||| ||||    
T  14535296 tattcccggagtacgtccttggaag 14535272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 116 - 180
Target Start/End: Original strand, 22268088 - 22268152
Alignment:
Q  116 catgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccaggtacgtcctt 180  Q
    ||||| |||||||||||||||||| ||| || |||||||||||||||||||||| ||||||||||    
T  22268088 catgcgcactggccaaatgttgttccccctgggaatcgaacccggtattccccaagtacgtcctt 22268152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 53 - 180
Target Start/End: Original strand, 24969322 - 24969447
Alignment:
Q  53 ttgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatc 152  Q
    ||||||| ||||||||||| ||  |||||||| ||  ||| ||||||||||| |||||||||||| || |||||||||| |||||||  || ||  ||||    
T  24969322 ttgctttcgcaccggtttccgagccatcaaagatgagcgattaatccgacttgtacgtagaggcacgcgcactggccaagtgttgtt--ccctggaaatc 24969419  T
Q  153 gaacccggtattccccaggtacgtcctt 180  Q
    ||||||||||||  |||| |||||||||    
T  24969420 gaacccggtattttccagatacgtcctt 24969447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 56 - 176
Target Start/End: Complemental strand, 27028389 - 27028269
Alignment:
Q  56 cttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaa 155  Q
    |||| ||||||||||| ||| || ||||||||  ||||||||||  || ||  |||||||||||| |||||||||| ||||||| ||| ||  |||||||    
T  27028389 ctttcgcaccggtttccgacccaccaaaggtgagcgactaatccagctcatgtgtagaggcatgcgcactggccaagtgttgttccccctggaaatcgaa 27028290  T
Q  156 cccggtattccccaggtacgt 176  Q
    || |||||| |||||||||||    
T  27028289 cctggtatttcccaggtacgt 27028269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 55 - 131
Target Start/End: Complemental strand, 48551968 - 48551892
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaa 131  Q
    ||||| ||||||||||| ||  |||||||||||||||||||||||| || |||||||||||||||| || |||||||    
T  48551968 gctttcgcaccggtttccgatccatcaaaggtggacgactaatccggctcatacgtagaggcatgcgcattggccaa 48551892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 55 - 180
Target Start/End: Original strand, 4195200 - 4195325
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| ||| |||||||  || || ||| |||||||| |||||||| || || ||||||||||||| |||| ||||||||||||| | | ||  ||||||    
T  4195200 gctttcgcatcggtttccaacccaccaatggtggacggctaatccggctcatgcgtagaggcatgcgcactagccaaatgttgttcctcctggaaatcga 4195299  T
Q  155 acccggtattccccaggtacgtcctt 180  Q
    || ||||||||||| | |||||||||    
T  4195300 actcggtattccccggatacgtcctt 4195325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 168
Target Start/End: Original strand, 4973110 - 4973221
Alignment:
Q  56 cttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaa 155  Q
    |||||||||| ||||||| |||| ||||| ||||||||||||||| ||  ||||||||||||||| || ||| ||| |||| || ||| |  ||||||||    
T  4973110 cttttgcaccagtttctg-ctcaccaaagctggacgactaatccggctcgtacgtagaggcatgcgcattggtcaagtgttattccccgtaggaatcgaa 4973208  T
Q  156 cccggtattcccc 168  Q
    |||| ||||||||    
T  4973209 cccgatattcccc 4973221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 61 - 185
Target Start/End: Original strand, 26423292 - 26423415
Alignment:
Q  61 gcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccgg 160  Q
    ||||||||||| ||| || |||||||| |||||||||| | ||  | |||||||||| |  ||||||||||  |||||||||| || |||||||||||||    
T  26423292 gcaccggtttccgac-caccaaaggtgaacgactaatctggctcgtgcgtagaggcaggtgcactggccaagcgttgtttcccctgggaatcgaacccgg 26423390  T
Q  161 tattccccaggtacgtccttagaag 185  Q
    ||||||   ||||||||||| ||||    
T  26423391 tattccttgggtacgtccttggaag 26423415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 176
Target Start/End: Original strand, 10317742 - 10317864
Alignment:
Q  53 ttgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatc 152  Q
    ||||||| ||||||||||| ||  || ||||||||  ||||||||| | ||||| | ||||||||| | ||||| |||| |||| || ||| || |||||    
T  10317742 ttgctttcgcaccggtttccgatccaccaaaggtgagcgactaatctg-cttatgcatagaggcatacgcactgaccaagtgttattccccctgggaatc 10317840  T
Q  153 gaacccggtattccccaggtacgt 176  Q
    |||||||||||||||| |||||||    
T  10317841 gaacccggtattccccgggtacgt 10317864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 81 - 168
Target Start/End: Complemental strand, 39475025 - 39474938
Alignment:
Q  81 aaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattcccc 168  Q
    |||||||||||||||||||| || || |||||||| |||| ||||| ||||  |||||| |||||  |||||||||||||||| ||||    
T  39475025 aaaggtggacgactaatccggctcatgcgtagaggtatgcgcactgaccaagcgttgttccccataggaatcgaacccggtatacccc 39474938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 56 - 131
Target Start/End: Complemental strand, 41945583 - 41945508
Alignment:
Q  56 cttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaa 131  Q
    |||| |||||| |||| |||||| ||||||||||||||||||||| ||  | ||||||||||||| ||||||||||    
T  41945583 ctttcgcaccgatttccgactcaccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaa 41945508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 55 - 185
Target Start/End: Complemental strand, 1606052 - 1605922
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| ||||||||||| ||  || ||||||||| ||||||||||| || |  | ||||||||||  ||||||||||  |||||| ||| ||  ||||||    
T  1606052 gctttcgcaccggtttccgatccaccaaaggtgggcgactaatccggctcaagcctagaggcatgtgcactggccaagcgttgttccccctggaaatcga 1605953  T
Q  155 acccggtattccccaggtacgtccttagaag 185  Q
    ||| ||||||| || ||||||||||| ||||    
T  1605952 accaggtattctccgggtacgtccttggaag 1605922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 55 - 185
Target Start/End: Complemental strand, 16802234 - 16802104
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||||||||| ||||  ||| || ||| ||||  ||||||||||| ||  | ||||||||||| | ||||||||||  |||||| | | | ||||||||    
T  16802234 gcttttgcaccagttttcgacccaccaatggtgagcgactaatccggctcgtgcgtagaggcatacgcactggccaatcgttgttcctcctaagaatcga 16802135  T
Q  155 acccggtattccccaggtacgtccttagaag 185  Q
    | |||||||||||| ||||||||||| ||||    
T  16802134 atccggtattccccgggtacgtccttggaag 16802104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 63 - 185
Target Start/End: Complemental strand, 21530851 - 21530729
Alignment:
Q  63 accggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggta 162  Q
    ||||||||| ||| || ||||||||  ||| |||| || ||  | ||||||||||||  ||||| |||| ||||||| ||| || ||||| ||||| |||    
T  21530851 accggtttccgacccaccaaaggtgagcgattaattcggctcgtgcgtagaggcatgtgcactgaccaagtgttgttccccctgggaatcaaacccagta 21530752  T
Q  163 ttccccaggtacgtccttagaag 185  Q
    |||||||||||||||||| ||||    
T  21530751 ttccccaggtacgtccttggaag 21530729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 78 - 167
Target Start/End: Original strand, 20247191 - 20247280
Alignment:
Q  78 atcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccc 167  Q
    ||||| |||||||||||||||||||   ||||||||| ||||   |||| ||||  |||||| ||||||||||||||||| |||||||||    
T  20247191 atcaatggtggacgactaatccgacccgtacgtagagacatgtgtactgcccaagcgttgttccccatgagaatcgaacctggtattccc 20247280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 56 - 168
Target Start/End: Complemental strand, 22573922 - 22573811
Alignment:
Q  56 cttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaa 155  Q
    |||| ||||||||||   || |||||| | ||||||| ||||||| || || |||| |||||||| |||||| ||||||||| ||||| ||| |||||||    
T  22573922 ctttcgcaccggttttcaacccatcaatgatggacgattaatccggctcatgcgtaaaggcatgcgcactggtcaaatgttg-ttcccctgaaaatcgaa 22573824  T
Q  156 cccggtattcccc 168  Q
    |||| ||||||||    
T  22573823 cccgatattcccc 22573811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 79 - 167
Target Start/End: Complemental strand, 30827379 - 30827291
Alignment:
Q  79 tcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccc 167  Q
    |||||||| ||||||||||||| ||  | |||||||||||||  ||||||||| |||||||  || ||| ||||||||| |||||||||    
T  30827379 tcaaaggtagacgactaatccggctcgtgcgtagaggcatgcgtactggccaagtgttgttctccctgaaaatcgaacctggtattccc 30827291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 65 - 125
Target Start/End: Original strand, 41267932 - 41267992
Alignment:
Q  65 cggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacact 125  Q
    ||||||| ||| ||||||||||||||||||||||  ||| || ||||||||||||||||||    
T  41267932 cggtttccgacccatcaaaggtggacgactaatctaactcatgcgtagaggcatgcacact 41267992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 178
Target Start/End: Complemental strand, 29152051 - 29151928
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| ||| ||||||| ||| |||||| ||| ||||| |||||||  |  |  |||||||||||| |||||| |||| ||||||   | || |||||||    
T  29152051 gctttcgcatcggtttccgacccatcaatggtagacgattaatccggatcgtgtgtagaggcatgcgcactggtcaaacgttgttcttcctgggaatcga 29151952  T
Q  155 acccggtattccccaggtacgtcc 178  Q
    |||||||||||| |||||||||||    
T  29151951 acccggtattcctcaggtacgtcc 29151928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 168
Target Start/End: Original strand, 45697186 - 45697300
Alignment:
Q  53 ttgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatc 152  Q
    ||||||| | || |||||| ||| || ||||||||||||||||| || ||| || ||||||||||||| |||||  ||| ||||| ||||| ||||||||    
T  45697186 ttgctttcgtactggtttccgacccaccaaaggtggacgactaacccaactcatgcgtagaggcatgcgcactgatcaagtgttg-ttcccctgagaatc 45697284  T
Q  153 gaacccggtattcccc 168  Q
    ||| | | ||||||||    
T  45697285 gaatctgatattcccc 45697300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 55 - 180
Target Start/End: Original strand, 42210260 - 42210385
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| ||| ||||||| ||| || ||| |||||  || ||||||| ||  | ||||||||||||| ||||||||||| ||||||| |  || |||||||    
T  42210260 gctttcgcatcggtttccgacccaccaacggtgggtgattaatccggctcgtgcgtagaggcatgcgcactggccaaacgttgttttcactgggaatcga 42210359  T
Q  155 acccggtattccccaggtacgtcctt 180  Q
    | |||||||||| | | |||||||||    
T  42210360 agccggtattcctcggatacgtcctt 42210385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 185
Target Start/End: Original strand, 19914723 - 19914830
Alignment:
Q  77 catcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccaggtacgt 176  Q
    |||||||||||| ||| ||||| | || || ||||||||||||| || |||||||  |||| ||||  || ||||||||||| |||||||  ||||||||    
T  19914723 catcaaaggtgggcgattaatctggctcatgcgtagaggcatgcgcattggccaagcgttg-ttcctttgggaatcgaacccagtattccttaggtacgt 19914821  T
Q  177 ccttagaag 185  Q
    |||| ||||    
T  19914822 ccttggaag 19914830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 164
Target Start/End: Original strand, 28396159 - 28396267
Alignment:
Q  56 cttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaa 155  Q
    |||||| ||||||||| ||| || ||||||| ||||||||||||| || || |||| |||||||| |||  || ||  |||||| ||| ||||||| |||    
T  28396159 cttttgtaccggtttccgacccaccaaaggtagacgactaatccggctcatgcgtaaaggcatgcgcaccagctaagcgttgttccccctgagaattgaa 28396258  T
Q  156 cccggtatt 164  Q
    |||| ||||    
T  28396259 cccgatatt 28396267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 77 - 168
Target Start/End: Original strand, 49142689 - 49142780
Alignment:
Q  77 catcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattcccc 168  Q
    |||||||||||| | ||||||||| ||  | ||||||||||||  ||||||| ||  |||||| ||| |  |||||||||||||||||||||    
T  49142689 catcaaaggtgggcaactaatccggctcgtgcgtagaggcatgtgcactggctaagcgttgttccccctaggaatcgaacccggtattcccc 49142780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 180
Target Start/End: Original strand, 7774403 - 7774505
Alignment:
Q  78 atcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccaggtacgtc 177  Q
    |||||||||| ||||||||||| |||  ||||||| ||||| |  |||||||||  |||||||||| | |||||| ||||  |||||| | || ||||||    
T  7774403 atcaaaggtgtacgactaatccaactcgtacgtagcggcatacgtactggccaagggttgtttcccctaagaatcaaaccaagtattctctagatacgtc 7774502  T
Q  178 ctt 180  Q
    |||    
T  7774503 ctt 7774505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 185
Target Start/End: Complemental strand, 23824000 - 23823930
Alignment:
Q  115 gcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccaggtacgtccttagaag 185  Q
    |||||| ||||||||||| |||||||||| |||||||| || | | |||||| | | ||||||||||||||    
T  23824000 gcatgcgcactggccaaacgttgtttcccttgagaatcaaatctgatattcctcggatacgtccttagaag 23823930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 126
Target Start/End: Complemental strand, 942649 - 942612
Alignment:
Q  89 acgactaatccgacttatacgtagaggcatgcacactg 126  Q
    ||||||||||||||||||| |||||| |||||||||||    
T  942649 acgactaatccgacttatatgtagagacatgcacactg 942612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 55 - 156
Target Start/End: Complemental strand, 32823354 - 32823253
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| ||||| ||||| ||| |||||| |||   ||||||||||| ||  | ||||||||||| ||||| |||||| ||||||| ||| || |||||||    
T  32823354 gctttcgcacccgtttccgacccatcaatggtctgcgactaatccggctcgtgcgtagaggcatacacaccggccaagtgttgttccccctgggaatcga 32823255  T
Q  155 ac 156  Q
    ||    
T  32823254 ac 32823253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 148 - 185
Target Start/End: Original strand, 34127711 - 34127748
Alignment:
Q  148 gaatcgaacccggtattccccaggtacgtccttagaag 185  Q
    ||||||||||||||||||||| ||||||||||| ||||    
T  34127711 gaatcgaacccggtattccccgggtacgtccttggaag 34127748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 55 - 139
Target Start/End: Original strand, 4228752 - 4228836
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtt 139  Q
    |||||| ||||| |||  ||| |||||| ||||| ||||||||||| || || ||||| ||||||  ||||||||||| ||||||    
T  4228752 gctttttcaccgattttcgacccatcaatggtgggcgactaatccggctcatgcgtaggggcatgtgcactggccaaacgttgtt 4228836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 55 - 131
Target Start/End: Complemental strand, 28744273 - 28744197
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaa 131  Q
    ||||| ||||| ||||| ||| || ||||||||||||||||||||| ||  || ||||||| ||||  |||||||||    
T  28744273 gctttcgcaccagtttccgacccaccaaaggtggacgactaatccggctcgtatgtagaggtatgcgtactggccaa 28744197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 67; Significance: 8e-30; HSPs: 63)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 55 - 185
Target Start/End: Complemental strand, 49078223 - 49078093
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| ||||||||||| |||  | ||| |||| |||||||||||| || || ||||||||||||| |||||||||| ||||||||||| || |||||||    
T  49078223 gctttcgcaccggtttccgacctaccaatggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgtttcccctgggaatcga 49078124  T
Q  155 acccggtattccccaggtacgtccttagaag 185  Q
    |||||||||||||| | ||||||||||||||    
T  49078123 acccggtattccccggatacgtccttagaag 49078093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 53 - 185
Target Start/End: Original strand, 30927724 - 30927856
Alignment:
Q  53 ttgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatc 152  Q
    ||||||||||||||||||||||| || |||| |||||||||||||||| || || |||||||||||||||| |||||||  |||||| ||  ||  ||||    
T  30927724 ttgcttttgcaccggtttctgacccaccaaaagtggacgactaatccggctcatgcgtagaggcatgcacattggccaagcgttgttccctctggaaatc 30927823  T
Q  153 gaacccggtattccccaggtacgtccttagaag 185  Q
    ||||||| |||| ||||||||||||||| ||||    
T  30927824 gaacccgatatttcccaggtacgtccttggaag 30927856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 55 - 185
Target Start/End: Original strand, 41663855 - 41663985
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| ||||||||||| ||| || ||| ||||||||||||||||  || || ||||||||||||| ||||| |||| ||||||| ||| || |||||||    
T  41663855 gctttcgcaccggtttccgacccaccaatggtggacgactaatccagctcatgcgtagaggcatgcgcactgaccaagtgttgttccccctgggaatcga 41663954  T
Q  155 acccggtattccccaggtacgtccttagaag 185  Q
    |||||||||||||| | ||||||||||||||    
T  41663955 acccggtattccccggatacgtccttagaag 41663985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 55 - 185
Target Start/End: Complemental strand, 8764100 - 8763970
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| ||||||||||| ||| || ||| ||||||||||||||||| ||  | ||||||||||||| |||||||||| ||||||| ||| || ||| |||    
T  8764100 gctttcgcaccggtttccgacccaccaacggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagtgttgttccccctgggaaacga 8764001  T
Q  155 acccggtattccccaggtacgtccttagaag 185  Q
    ||||| |||||||| ||||||||||| ||||    
T  8764000 acccgatattccccgggtacgtccttggaag 8763970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 55 - 185
Target Start/End: Complemental strand, 18915976 - 18915846
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| |||||||||||  || || ||| ||||  ||||||||||| ||  | |||||||||||||||||||||||| ||||||| ||| || |||||||    
T  18915976 gctttcgcaccggtttccaacccaccaatggtgagcgactaatccggctcgtgcgtagaggcatgcacactggccaagtgttgttccccctgggaatcga 18915877  T
Q  155 acccggtattccccaggtacgtccttagaag 185  Q
    |||||||||||||| ||||||||||| ||||    
T  18915876 acccggtattccccgggtacgtccttggaag 18915846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 55 - 185
Target Start/End: Original strand, 45361881 - 45362011
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| ||||||||||| ||| ||  ||||||| |||||||||||| ||||| ||||| ||||||| ||||||||||  |||||| | | ||||||||||    
T  45361881 gctttcgcaccggtttccgacccactaaaggtgaacgactaatccggcttatgcgtagtggcatgcgcactggccaagcgttgttcctcctgagaatcga 45361980  T
Q  155 acccggtattccccaggtacgtccttagaag 185  Q
    |||||||||||||  ||||||||||| ||||    
T  45361981 acccggtattcccagggtacgtccttggaag 45362011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 53 - 184
Target Start/End: Original strand, 9659176 - 9659306
Alignment:
Q  53 ttgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatc 152  Q
    ||||||| |||||||||||  || || ||||||||||||||||||||| || || |||| |||||||| |||| | |||| |||| ||||| || |||||    
T  9659176 ttgctttcgcaccggtttccaacccaccaaaggtggacgactaatccggctcatgcgtaaaggcatgcgcactagtcaaacgttg-ttcccctgggaatc 9659274  T
Q  153 gaacccggtattccccaggtacgtccttagaa 184  Q
    ||||||||||||||||  ||||||||||||||    
T  9659275 gaacccggtattccccgagtacgtccttagaa 9659306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 53 - 168
Target Start/End: Complemental strand, 10422899 - 10422784
Alignment:
Q  53 ttgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatc 152  Q
    ||||||| ||||||||||| |||| | ||||||||||||||||||||| || || ||||||||||||| |||||||||| ||||||| | | |   ||||    
T  10422899 ttgctttcgcaccggtttccgacttaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttcctcctagaaatc 10422800  T
Q  153 gaacccggtattcccc 168  Q
    ||||||||||||||||    
T  10422799 gaacccggtattcccc 10422784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 56 - 180
Target Start/End: Complemental strand, 16263653 - 16263529
Alignment:
Q  56 cttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaa 155  Q
    |||| ||||||||||| ||  ||||||| ||||||||||| |||| ||||| ||||||||||||| ||||||||||  |||||| | | ||  |||||||    
T  16263653 ctttcgcaccggtttccgatccatcaaaagtggacgactattccggcttatgcgtagaggcatgcgcactggccaagcgttgttcctcctggaaatcgaa 16263554  T
Q  156 cccggtattccccaggtacgtcctt 180  Q
    || |||||||||||| |||||||||    
T  16263553 cctggtattccccagatacgtcctt 16263529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 77 - 181
Target Start/End: Original strand, 33498860 - 33498964
Alignment:
Q  77 catcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccaggtacgt 176  Q
    |||||||||||||||||||||||| || || ||||||||||||| ||||||||||  |||| | | | ||||||||||||||||||||  |||||||| |    
T  33498860 catcaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgctcctcctgagaatcgaacccggtattttccaggtacat 33498959  T
Q  177 cctta 181  Q
    |||||    
T  33498960 cctta 33498964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 55 - 178
Target Start/End: Original strand, 17642003 - 17642126
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| ||||| ||||| ||| || ||||||||||||||||||||| ||  | ||||||||||||| |||||||||| ||||||| ||| || |||||||    
T  17642003 gctttcgcaccagtttccgacccaccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcga 17642102  T
Q  155 acccggtattccccaggtacgtcc 178  Q
    |||| ||||| ||  |||||||||    
T  17642103 acccagtatttcctgggtacgtcc 17642126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 178
Target Start/End: Original strand, 2980928 - 2981053
Alignment:
Q  53 ttgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatc 152  Q
    ||||||| |||||| |||| ||| ||  |||  ||||||||||||||||||  | |||||||||||||||||||||||| ||||||| ||  || |||||    
T  2980928 ttgctttcgcaccgatttccgacccactaaacatggacgactaatccgactcgtgcgtagaggcatgcacactggccaagtgttgttcccgctgggaatc 2981027  T
Q  153 gaacccggtattccccaggtacgtcc 178  Q
    |||||| ||||||||| | |||||||    
T  2981028 gaacccagtattccccggatacgtcc 2981053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 55 - 180
Target Start/End: Complemental strand, 26325921 - 26325796
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| ||||||||||| ||| || ||| ||||||||||||||||| || || ||||||||||||| ||||| |||| ||||||| ||  || |||||||    
T  26325921 gctttcgcaccggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactgaccaagtgttgttcccgctgggaatcga 26325822  T
Q  155 acccggtattccccaggtacgtcctt 180  Q
    ||||| |||||| | | |||||||||    
T  26325821 acccgatattcctcggatacgtcctt 26325796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 166
Target Start/End: Original strand, 32142843 - 32142956
Alignment:
Q  53 ttgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatc 152  Q
    ||||||| ||| ||||||| ||| |||||||||||  |||||||| || || || |||| |||||||| |||||||||| ||||||| ||| ||| ||||    
T  32142843 ttgctttcgcatcggtttccgacccatcaaaggtgagcgactaattcggctcatgcgtaaaggcatgcgcactggccaagtgttgttccccctgaaaatc 32142942  T
Q  153 gaacccggtattcc 166  Q
    ||||||||||||||    
T  32142943 gaacccggtattcc 32142956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 55 - 168
Target Start/End: Complemental strand, 34697444 - 34697331
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| ||| |||||||  || ||||||| |||| ||||||||||| || || |||||||||||||||||| ||||| ||||||| ||| | ||||||||    
T  34697444 gctttcgcatcggtttccaacccatcaaaagtgggcgactaatccggctcatgcgtagaggcatgcacactagccaagtgttgttccccctaagaatcga 34697345  T
Q  155 acccggtattcccc 168  Q
    ||| ||||||||||    
T  34697344 acctggtattcccc 34697331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 53 - 165
Target Start/End: Original strand, 11397886 - 11397997
Alignment:
Q  53 ttgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatc 152  Q
    ||||||| |||||| |||| ||| || |||||||||||||||||||||||| || ||||||||||| | || |||||||| |||| ||||| |  |||||    
T  11397886 ttgctttcgcaccgatttccgacccaccaaaggtggacgactaatccgactcatgcgtagaggcatacgcattggccaaacgttg-ttcccctcggaatc 11397984  T
Q  153 gaacccggtattc 165  Q
    |||||||||||||    
T  11397985 gaacccggtattc 11397997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 53 - 185
Target Start/End: Complemental strand, 16956577 - 16956445
Alignment:
Q  53 ttgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatc 152  Q
    ||||||| |||| |||||| ||| || ||||||||   |||||||||| ||  | ||||||||||||| |||||| |||| |||||| ||| |||||| |    
T  16956577 ttgctttcgcactggtttccgacccaccaaaggtgagtgactaatccggctcgtgcgtagaggcatgcgcactggtcaaacgttgttacccctgagaacc 16956478  T
Q  153 gaacccggtattccccaggtacgtccttagaag 185  Q
    |||| ||||||||||| ||||||||||| ||||    
T  16956477 gaacacggtattccccgggtacgtccttggaag 16956445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 56 - 164
Target Start/End: Original strand, 31576547 - 31576655
Alignment:
Q  56 cttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaa 155  Q
    |||||||||||||||| ||| |||||||| ||||||||||| ||| || || ||||||||||  | || |||||||   ||||||||| |||||||||||    
T  31576547 cttttgcaccggtttccgacacatcaaagatggacgactaagccggctcatgcgtagaggcacacgcattggccaagcattgtttcccctgagaatcgaa 31576646  T
Q  156 cccggtatt 164  Q
    |||||||||    
T  31576647 cccggtatt 31576655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 57 - 168
Target Start/End: Original strand, 14254269 - 14254380
Alignment:
Q  57 ttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaac 156  Q
    |||||||  |||||| ||| |||||||||||||||||||||||| || || |||| ||||||||  |||||||||  |||||| ||| ||| ||||||||    
T  14254269 ttttgcaatggtttccgacccatcaaaggtggacgactaatccggctcatgcgtaaaggcatgcgtactggccaagcgttgttccccctgaaaatcgaac 14254368  T
Q  157 ccggtattcccc 168  Q
     |||||||||||    
T  14254369 tcggtattcccc 14254380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 53 - 168
Target Start/End: Complemental strand, 26660248 - 26660134
Alignment:
Q  53 ttgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatc 152  Q
    ||||||| ||||||||||| ||| || ||||||||| ||||||||||| || || |||||||||||||  ||||  ||||||||||| ||| ||  ||||    
T  26660248 ttgctttcgcaccggtttccgacccaccaaaggtgg-cgactaatccggctcatgcgtagaggcatgcgtactgatcaaatgttgttccccgtggaaatc 26660150  T
Q  153 gaacccggtattcccc 168  Q
    ||||||||||||||||    
T  26660149 gaacccggtattcccc 26660134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 55 - 185
Target Start/End: Complemental strand, 5855631 - 5855501
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| ||| ||||||| ||| ||  ||||||| |||||||||||| || || ||||||||||||| ||||||||||  |||||| | | || |||||||    
T  5855631 gctttcgcatcggtttccgacccactaaaggtgaacgactaatccgcctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctgggaatcga 5855532  T
Q  155 acccggtattccccaggtacgtccttagaag 185  Q
    ||||||||||||||   ||||||||| ||||    
T  5855531 acccggtattccccgaatacgtccttggaag 5855501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 63 - 176
Target Start/End: Complemental strand, 5504132 - 5504019
Alignment:
Q  63 accggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggta 162  Q
    ||||||||| ||| |||||||||||||||||||||||| || || ||||||||||||  ||||   |||  ||||||| || ||||||||||||| | ||    
T  5504132 accggtttccgacccatcaaaggtggacgactaatccggctcatgcgtagaggcatgtgcactaatcaagcgttgttttccctgagaatcgaacctgata 5504033  T
Q  163 ttccccaggtacgt 176  Q
    |||||||| |||||    
T  5504032 ttccccagatacgt 5504019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 91 - 180
Target Start/End: Original strand, 28324615 - 28324704
Alignment:
Q  91 gactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccaggtacgtcctt 180  Q
    |||||||||| || || ||||||||||||| ||||| |||| |||||||||||  | |||||||||||| ||||||| ||||||||||||    
T  28324615 gactaatccggctcatgcgtagaggcatgcgcactgaccaagtgttgtttccccggggaatcgaacccgatattccctaggtacgtcctt 28324704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 53 - 185
Target Start/End: Original strand, 10172968 - 10173100
Alignment:
Q  53 ttgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatc 152  Q
    ||||||| ||||||||||| ||| || ||||||||| ||| ||||||| || || ||||||||||||  ||||||||||  ||||||    ||| ||||     
T  10172968 ttgctttcgcaccggtttccgacccaccaaaggtgggcgagtaatccggctcatgcgtagaggcatgggcactggccaagcgttgttctttatgggaatt 10173067  T
Q  153 gaacccggtattccccaggtacgtccttagaag 185  Q
    ||| |||||||||||||| ||||||||| ||||    
T  10173068 gaatccggtattccccagatacgtccttggaag 10173100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 80 - 180
Target Start/End: Original strand, 45726457 - 45726557
Alignment:
Q  80 caaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccaggtacgtcct 179  Q
    |||||||| |||||||||||| || || ||||||| ||| | ||||||||||||||| || | | ||||||||||||| |||||||| | ||||||||||    
T  45726457 caaaggtgaacgactaatccggctcatgcgtagagacatacgcactggccaaatgttattcctcctgagaatcgaaccaggtattcctcgggtacgtcct 45726556  T
Q  180 t 180  Q
    |    
T  45726557 t 45726557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 61 - 156
Target Start/End: Original strand, 17092482 - 17092577
Alignment:
Q  61 gcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaac 156  Q
    ||||||||||||||   | ||||||||||||||||||||| ||  | ||||||||||| ||||||||||||  |||||||||| ||| ||||||||    
T  17092482 gcaccggtttctgatctaccaaaggtggacgactaatccggctcgtgcgtagaggcatacacactggccaatcgttgtttcccctgaaaatcgaac 17092577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 185
Target Start/End: Complemental strand, 34719885 - 34719755
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| ||||| ||||| ||| || ||||||||  ||||||||| ||||  | ||||||||||||| |||||| |||  ||| || ||  || |||||||    
T  34719885 gctttcgcaccagtttccgacccaccaaaggtgagcgactaatctgactcgtgcgtagaggcatgcgcactggtcaagcgttattcccagtgggaatcga 34719786  T
Q  155 acccggtattccccaggtacgtccttagaag 185  Q
    |||| ||||||||||||||||||||| ||||    
T  34719785 acccagtattccccaggtacgtccttggaag 34719755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 177
Target Start/End: Original strand, 43959820 - 43959942
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| ||||||||||| ||  ||  |||||||| ||||||||||| ||  | ||||||||||||| ||||||||||  |||||| ||| || |||| ||    
T  43959820 gctttcgcaccggtttccgatccactaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccctgggaattga 43959919  T
Q  155 acccggtattccccaggtacgtc 177  Q
    ||||| |||||||| ||||||||    
T  43959920 acccgatattccccgggtacgtc 43959942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 77 - 165
Target Start/End: Complemental strand, 10336603 - 10336515
Alignment:
Q  77 catcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattc 165  Q
    |||||||||||||||| ||||||| || || ||||||||||||| |||||| |||  |||||| ||| ||| ||||||||||| |||||    
T  10336603 catcaaaggtggacgattaatccggctcatgcgtagaggcatgcgcactggtcaagcgttgttccccctgaaaatcgaacccgatattc 10336515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 84 - 164
Target Start/End: Original strand, 42710166 - 42710246
Alignment:
Q  84 ggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtatt 164  Q
    |||||||||||||| ||  |||| ||||||||||||| |||||||||| | ||||||||| ||| ||||||||||| ||||    
T  42710166 ggtggacgactaattcggtttatgcgtagaggcatgcgcactggccaagtattgtttcccctgaaaatcgaacccgatatt 42710246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 55 - 185
Target Start/End: Complemental strand, 37339929 - 37339798
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgt-ttcccatgagaatcg 153  Q
    ||||| |||||||||||  || || ||||||||| ||||||||||| ||  | ||| ||||||||| ||||||||||  |||||   ||| || ||||||    
T  37339929 gctttcgcaccggtttccaacccaccaaaggtgggcgactaatccggctcgtgcgttgaggcatgcgcactggccaagcgttgtccccccctgggaatcg 37339830  T
Q  154 aacccggtattccccaggtacgtccttagaag 185  Q
    ||||||||||||||| ||||| ||||| ||||    
T  37339829 aacccggtattccccgggtacatccttggaag 37339798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 180
Target Start/End: Original strand, 50503358 - 50503485
Alignment:
Q  53 ttgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatc 152  Q
    ||||||| ||| ||||||| ||| || ||  ||||| |||| |||||| ||  | ||||||||||||| |||||| ||| ||||||| ||| || |||||    
T  50503358 ttgctttcgcatcggtttccgacccaccattggtgggcgacaaatccggctcgtgcgtagaggcatgcgcactggtcaagtgttgttccccctgggaatc 50503457  T
Q  153 gaacccggtattccccaggtacgtcctt 180  Q
    ||||||| |||||||| | |||||||||    
T  50503458 gaacccgatattccccggatacgtcctt 50503485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 53 - 131
Target Start/End: Original strand, 4581679 - 4581757
Alignment:
Q  53 ttgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaa 131  Q
    ||||||| ||||||||||| ||| || |||||||||||||||| |||| ||  | ||||||||||||| ||||||||||    
T  4581679 ttgctttcgcaccggtttccgacccaccaaaggtggacgactattccggctcgtgcgtagaggcatgcgcactggccaa 4581757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 55 - 185
Target Start/End: Original strand, 9853276 - 9853406
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    |||||||||||| |||||||| || ||||||||||||| ||||| |  |  |  |||||||||||| ||||||  ||| |||||||||| |  |||||||    
T  9853276 gcttttgcaccgatttctgacccaccaaaggtggacgattaatctggttcgtgtgtagaggcatgcgcactggtaaaacgttgtttcccctaggaatcga 9853375  T
Q  155 acccggtattccccaggtacgtccttagaag 185  Q
    ||||||||||  || ||||| ||||| ||||    
T  9853376 acccggtattttccgggtacatccttggaag 9853406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 114 - 180
Target Start/End: Original strand, 34334353 - 34334419
Alignment:
Q  114 ggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccaggtacgtcctt 180  Q
    ||||||| |||||||||| ||||||| ||| || ||||||||||||||||||||| | |||||||||    
T  34334353 ggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccggatacgtcctt 34334419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 55 - 167
Target Start/End: Complemental strand, 35908865 - 35908754
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaa-tgttgtttcccatgagaatcg 153  Q
    ||||||||||||||||| ||| ||   | ||||||||||||||||| || || ||||||||||||| ||||| ||||| ||||||| ||| | | |||||    
T  35908865 gcttttgcaccggtttccgacccac--atggtggacgactaatccggctcatgcgtagaggcatgcgcactgaccaaagtgttgttccccctaaaaatcg 35908768  T
Q  154 aacccggtattccc 167  Q
    || |||||||||||    
T  35908767 aatccggtattccc 35908754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 184
Target Start/End: Complemental strand, 13266019 - 13265918
Alignment:
Q  83 aggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccaggtacgtccttag 182  Q
    |||||||||||||| ||| || || ||||||||||||| ||||||| | | ||||||| || |  |||||||||| |||||||| | | |||||||||||    
T  13266019 aggtggacgactaacccggctcatgcgtagaggcatgcgcactggctagacgttgttttccctaggaatcgaaccaggtattcctcggatacgtccttag 13265920  T
Q  183 aa 184  Q
    ||    
T  13265919 aa 13265918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 177
Target Start/End: Complemental strand, 26258803 - 26258683
Alignment:
Q  56 cttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaa 155  Q
    |||||||||| |||||  || ||  |||||||||||| |||||||||| || |||| |||||||  ||||| ||||  ||||| | || |||||||||||    
T  26258803 cttttgcaccagtttccaacccactaaaggtggacgattaatccgactcatgcgtaaaggcatgtgcactgaccaagcgttgtcttcc-tgagaatcgaa 26258705  T
Q  156 cccggtattccccaggtacgtc 177  Q
     |||||||||||| ||||||||    
T  26258704 tccggtattccccgggtacgtc 26258683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 81 - 185
Target Start/End: Original strand, 18649377 - 18649481
Alignment:
Q  81 aaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccaggtacgtcctt 180  Q
    |||||||| ||| ||||| | ||  ||||||||||||||| |||||| |||  |||||| ||| ||| ||||||||||| ||||| |||| |||||||||    
T  18649377 aaaggtgggcgattaatctggctcgtacgtagaggcatgcgcactggtcaagcgttgttccccctgaaaatcgaacccgatattctccagatacgtcctt 18649476  T
Q  181 agaag 185  Q
     ||||    
T  18649477 ggaag 18649481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 53 - 177
Target Start/End: Original strand, 33418112 - 33418236
Alignment:
Q  53 ttgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatc 152  Q
    |||||||||| | |||||| |||  | ||||||||||||||||||||| ||  | | ||||||||||| ||||||||||  |||||  ||| |  |||||    
T  33418112 ttgcttttgcgctggtttccgaccgaccaaaggtggacgactaatccggctcgtgcatagaggcatgcgcactggccaagcgttgtcccccctaggaatc 33418211  T
Q  153 gaacccggtattccccaggtacgtc 177  Q
    ||| ||||||||| || ||||||||    
T  33418212 gaatccggtattctccgggtacgtc 33418236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 185
Target Start/End: Original strand, 47312932 - 47313027
Alignment:
Q  89 acgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccaggtacgtccttagaag 185  Q
    |||||||||| | || || ||||||||||| | ||||||||||| |||||| |||  | ||||| ||||||||||||||||| ||||||||| ||||    
T  47312932 acgactaatctggctcatgcgtagaggcatacgcactggccaaacgttgttcccctag-gaatcaaacccggtattccccagatacgtccttggaag 47313027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 55 - 139
Target Start/End: Complemental strand, 50095013 - 50094929
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtt 139  Q
    ||||||||||||||||| ||| ||  || |||||||||||||||||||| || |||||| ||||||  ||||| |||| ||||||    
T  50095013 gcttttgcaccggtttccgacccactaatggtggacgactaatccgactcatgcgtagaagcatgcgtactggtcaaacgttgtt 50094929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 139
Target Start/End: Complemental strand, 10507778 - 10507723
Alignment:
Q  84 ggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtt 139  Q
    ||||||||||||||||| || || |||||||| |||||||||||||||| ||||||    
T  10507778 ggtggacgactaatccggctcatgcgtagaggtatgcacactggccaaacgttgtt 10507723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 185
Target Start/End: Original strand, 17988690 - 17988788
Alignment:
Q  86 tggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccaggtacgtccttagaag 185  Q
    |||||||||||||||  | || |||||||| |||| ||||||||||   ||||||||| ||| |||| |||| |||||||||  ||||||||||||||||    
T  17988690 tggacgactaatccggttcatgcgtagaggtatgcgcactggccaagcattgtttccc-tgaaaatcaaacctggtattcccggggtacgtccttagaag 17988788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 168
Target Start/End: Original strand, 40288474 - 40288589
Alignment:
Q  53 ttgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatc 152  Q
    |||||||||||| |||||| ||| || ||| | ||  ||||||||||| ||  |  ||||||||||||| |||||||||  |||||| ||| ||  ||||    
T  40288474 ttgcttttgcactggtttccgacccaccaaggatgagcgactaatccggctcgtgtgtagaggcatgcatactggccaaccgttgttccccctggaaatc 40288573  T
Q  153 gaacccggtattcccc 168  Q
    ||||||||||||||||    
T  40288574 gaacccggtattcccc 40288589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 63 - 165
Target Start/End: Complemental strand, 2567377 - 2567275
Alignment:
Q  63 accggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggta 162  Q
    ||||||||| ||| || ||||| |||||| |||||| ||||  |  |||||||||||| ||||||||||  ||||||| ||  || ||||||||||||||    
T  2567377 accggtttccgacccaccaaagatggacggctaatctgactcgtgagtagaggcatgcgcactggccaagcgttgttttccccgaaaatcgaacccggta 2567278  T
Q  163 ttc 165  Q
    |||    
T  2567277 ttc 2567275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 91 - 177
Target Start/End: Complemental strand, 25165473 - 25165388
Alignment:
Q  91 gactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccaggtacgtc 177  Q
    |||||||||| ||| | | ||||||||||| |||||||  | ||||||| ||| ||| ||||||| |||||||||||||||||||||    
T  25165473 gactaatccggcttgtgcctagaggcatgcgcactggcagagtgttgttcccc-tgataatcgaatccggtattccccaggtacgtc 25165388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 86 - 164
Target Start/End: Complemental strand, 44969742 - 44969665
Alignment:
Q  86 tggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtatt 164  Q
    ||||||||||||||| || || ||||| ||||||||||||||||||  |||| ||| | ||||||||||||| ||||||    
T  44969742 tggacgactaatccggctcatgcgtaggggcatgcacactggccaagcgttg-ttctcctgagaatcgaacctggtatt 44969665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 185
Target Start/End: Original strand, 15238158 - 15238235
Alignment:
Q  108 cgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccaggtacgtccttagaag 185  Q
    ||||||||||||| || |||||||  |||| | ||| || |||||||||||| ||||||| |||||||||||| ||||    
T  15238158 cgtagaggcatgctcattggccaagcgttgctccccctgggaatcgaacccgatattccctaggtacgtccttggaag 15238235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 159
Target Start/End: Original strand, 16150704 - 16150784
Alignment:
Q  78 atcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccg 159  Q
    ||||||||||||||| ||||| ||||| |||||| || ||||| || |||||||| |||| |||||||  ||||||||||||    
T  16150704 atcaaaggtggacgattaatctgacttgtacgtaaagacatgcgcattggccaaacgttg-ttcccataggaatcgaacccg 16150784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 141
Target Start/End: Complemental strand, 19195469 - 19195389
Alignment:
Q  56 cttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttc 141  Q
    |||| ||||||||||| ||||||||||||||||||||      || || || ||||||||||||| ||||||||||| ||||||||    
T  19195469 ctttcgcaccggtttccgactcatcaaaggtggacga-----tcggctcatgcgtagaggcatgcgcactggccaaacgttgtttc 19195389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 53 - 166
Target Start/End: Original strand, 32150919 - 32151032
Alignment:
Q  53 ttgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatc 152  Q
    ||||||| ||| ||||||  ||| |||||||||||  |||||||| || || || |||| |||||||| ||||| |||||||||||| ||| ||  ||||    
T  32150919 ttgctttcgcatcggttttcgacccatcaaaggtgagcgactaattcggctcatgcgtaaaggcatgcgcactgaccaaatgttgttccccctggaaatc 32151018  T
Q  153 gaacccggtattcc 166  Q
    ||||| | ||||||    
T  32151019 gaacctgatattcc 32151032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 185
Target Start/End: Complemental strand, 32958 - 32850
Alignment:
Q  77 catcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccaggtacgt 176  Q
    ||||||| || |||||||||| || || || ||||||||||||  ||||| ||||  |||||| | | || |||||| ||||| |||||||| |||||||    
T  32958 catcaaaagtagacgactaattcggctcatgcgtagaggcatgtgcactgaccaagcgttgttcctcctgggaatcggacccgatattcccccggtacgt 32859  T
Q  177 ccttagaag 185  Q
    |||| ||||    
T  32858 ccttggaag 32850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 6899669 - 6899597
Alignment:
Q  53 ttgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacact 125  Q
    ||||||| ||||||||||| ||  |||||||||||| ||||||||||| ||| | |||| |||||||| ||||    
T  6899669 ttgctttcgcaccggtttccgatccatcaaaggtgggcgactaatccggcttgtgcgtaaaggcatgcgcact 6899597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 65 - 180
Target Start/End: Original strand, 17358480 - 17358595
Alignment:
Q  65 cggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtatt 164  Q
    ||||||||||| ||  |||| || || ||||||| | || || |||| |||||||| || ||| |||  ||||||  || ||||||||||||||||||||    
T  17358480 cggtttctgacccactaaagatgaacaactaatcgggctcatgcgtaaaggcatgcgcattggtcaagcgttgttctccctgagaatcgaacccggtatt 17358579  T
Q  165 ccccaggtacgtcctt 180  Q
    |||||  |||||||||    
T  17358580 ccccaaatacgtcctt 17358595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 106 - 185
Target Start/End: Complemental strand, 31734346 - 31734268
Alignment:
Q  106 tacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccaggtacgtccttagaag 185  Q
    ||||||||||||||| ||||||||||  |||||||||| | ||||||||| || ||||||| | ||||| ||||| ||||    
T  31734346 tacgtagaggcatgcgcactggccaatcgttgtttcccct-agaatcgaatccagtattcctcgggtacatccttggaag 31734268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 169
Target Start/End: Complemental strand, 13262168 - 13262078
Alignment:
Q  79 tcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattcccca 169  Q
    |||| ||||||||||||||||||||  | ||||||| |||||  | || ||||| ||||||  || ||  |||||||||||||||||||||    
T  13262168 tcaatggtggacgactaatccgactcgtgcgtagagacatgcgtattgaccaaacgttgttctccctggaaatcgaacccggtattcccca 13262078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 185
Target Start/End: Original strand, 33004050 - 33004144
Alignment:
Q  91 gactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccaggtacgtccttagaag 185  Q
    |||||||||| ||  | ||||||||||||| ||||||||||   ||||||||| ||  ||||||| ||| |||||||| | ||||||||| ||||    
T  33004050 gactaatccggctcgtgcgtagaggcatgcgcactggccaagcattgtttcccctggaaatcgaatccgatattccccggatacgtccttggaag 33004144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 143
Target Start/End: Original strand, 38791631 - 38791697
Alignment:
Q  77 catcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttccc 143  Q
    |||||||| |||||||||||| || || || ||||||||||||| |||| |||||  ||||||||||    
T  38791631 catcaaagatggacgactaattcggctcatgcgtagaggcatgcgcacttgccaatcgttgtttccc 38791697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 159
Target Start/End: Original strand, 38859117 - 38859219
Alignment:
Q  57 ttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaac 156  Q
    ||||||||||||||  ||| |||||||||||| ||| ||||| ||||  | ||||||||||||  || || |||||  ||||| ||| || |||||||||    
T  38859117 ttttgcaccggttttcgacccatcaaaggtgggcgattaatctgactcgtgcgtagaggcatgtgcattgaccaaacattgttacccctgggaatcgaac 38859216  T
Q  157 ccg 159  Q
    |||    
T  38859217 ccg 38859219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 80 - 185
Target Start/End: Original strand, 12036768 - 12036873
Alignment:
Q  80 caaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccaggtacgtcct 179  Q
    ||||||||||||| ||||| | ||  | ||||||||||||| ||||||||||   ||||| ||| |  ||||| ||||| |||||| | |||||||||||    
T  12036768 caaaggtggacgattaatctggctcgtgcgtagaggcatgcgcactggccaagcattgttccccctaggaatcaaacccagtattctctaggtacgtcct 12036867  T
Q  180 tagaag 185  Q
    | ||||    
T  12036868 tggaag 12036873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 65 - 185
Target Start/End: Complemental strand, 15466064 - 15465944
Alignment:
Q  65 cggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtatt 164  Q
    ||||||| ||| || ||||||||  |||| |||| ||||  | ||||||||||||  ||||| ||||  |||||| ||| ||  ||||||||| ||||||    
T  15466064 cggtttccgacccaccaaaggtgagcgaccaatcagactcgtgcgtagaggcatgtgcactgaccaagcgttgttccccctggaaatcgaacctggtatt 15465965  T
Q  165 ccccaggtacgtccttagaag 185  Q
    |||||  ||||||||| ||||    
T  15465964 ccccaaatacgtccttggaag 15465944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 109 - 185
Target Start/End: Complemental strand, 34878045 - 34877969
Alignment:
Q  109 gtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccaggtacgtccttagaag 185  Q
    |||||||||||| |||||||||| ||||||| | | |  |||||||||| ||||||||||   ||||||||| ||||    
T  34878045 gtagaggcatgcgcactggccaagtgttgttccgcctaggaatcgaacctggtattccccgaatacgtccttggaag 34877969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 66; Significance: 3e-29; HSPs: 68)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 55 - 180
Target Start/End: Original strand, 36145213 - 36145338
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| ||||||||||| || ||||||||||||||||||||||||| || ||  |||||||||||| |||||  |||  |||||||||| || |||||||    
T  36145213 gctttcgcaccggtttccgattcatcaaaggtggacgactaatccggctcatgtgtagaggcatgcgcactgatcaagcgttgtttcccctgggaatcga 36145312  T
Q  155 acccggtattccccaggtacgtcctt 180  Q
    |||||||||||||| |||||||||||    
T  36145313 acccggtattccccgggtacgtcctt 36145338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 55 - 185
Target Start/End: Complemental strand, 8889135 - 8889005
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    |||||| |||||||||| ||| || ||||||||||||||||||||| || || ||||||| ||||| ||||| |||| ||||||| ||| |  |||||||    
T  8889135 gcttttacaccggtttccgacccaccaaaggtggacgactaatccggctcatgcgtagagccatgcgcactgcccaagtgttgttccccctaggaatcga 8889036  T
Q  155 acccggtattccccaggtacgtccttagaag 185  Q
    |||||||||||||| | ||||||||||||||    
T  8889035 acccggtattccccggatacgtccttagaag 8889005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 56 - 185
Target Start/End: Complemental strand, 29895899 - 29895770
Alignment:
Q  56 cttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaa 155  Q
    |||| ||||||||||| ||  || ||| ||||||||||||||||| || || ||||||||||||| |||||||||| ||||||| ||| || ||||||||    
T  29895899 ctttcgcaccggtttccgaaccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaa 29895800  T
Q  156 cccggtattccccaggtacgtccttagaag 185  Q
    ||||||||||||| | ||||||||| ||||    
T  29895799 cccggtattccccggatacgtccttggaag 29895770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 53 - 185
Target Start/End: Complemental strand, 6779326 - 6779194
Alignment:
Q  53 ttgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatc 152  Q
    ||||||| ||| ||| ||| || ||| ||||||||||||||||||||| || || | ||||||||||| |||||||||  ||||||| ||| || |||||    
T  6779326 ttgctttcgcatcgggttccgattcaccaaaggtggacgactaatccggctcatgcatagaggcatgcgcactggccaggtgttgttccccctgggaatc 6779227  T
Q  153 gaacccggtattccccaggtacgtccttagaag 185  Q
    ||||||||||||| |||||||||||||| ||||    
T  6779226 gaacccggtattctccaggtacgtccttggaag 6779194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 53 - 185
Target Start/End: Complemental strand, 55921149 - 55921017
Alignment:
Q  53 ttgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatc 152  Q
    ||||||| ||||||||||| ||| || ||||||||  ||| ||||||| || |||||||||||||||| ||||| |||| ||||||| ||| || |||||    
T  55921149 ttgctttcgcaccggtttccgacccaccaaaggtgagcgattaatccggctcatacgtagaggcatgcgcactgaccaagtgttgttccccctgggaatc 55921050  T
Q  153 gaacccggtattccccaggtacgtccttagaag 185  Q
    |||||||||||||||| ||| ||||||| ||||    
T  55921049 gaacccggtattccccgggtgcgtccttggaag 55921017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 84 - 185
Target Start/End: Complemental strand, 1446910 - 1446809
Alignment:
Q  84 ggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccaggtacgtccttaga 183  Q
    ||||||||||||||||| || || ||||||||||||| |||||||||| ||||||| ||| || ||||||||||||||||||||| | ||||||||| ||    
T  1446910 ggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccggatacgtccttgga 1446811  T
Q  184 ag 185  Q
    ||    
T  1446810 ag 1446809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 53 - 185
Target Start/End: Complemental strand, 24166565 - 24166433
Alignment:
Q  53 ttgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatc 152  Q
    ||||||| ||||||||||| ||  ||||||||||||  |||||||| | ||  | ||||||||||||| ||||||||||| |||||||||| || |||||    
T  24166565 ttgctttcgcaccggtttccgatccatcaaaggtgggtgactaatctggctcgtgcgtagaggcatgcgcactggccaaacgttgtttcccttgggaatc 24166466  T
Q  153 gaacccggtattccccaggtacgtccttagaag 185  Q
    |||||| |||||||||  |||||||||| ||||    
T  24166465 gaacccagtattccccgagtacgtccttggaag 24166433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 55 - 185
Target Start/End: Complemental strand, 53599173 - 53599043
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| ||||||||||| ||  ||  ||||||| |||| ||||||| || || ||||||||||||| ||||||||||| |||||| | | || |||||||    
T  53599173 gctttcgcaccggtttccgatccactaaaggtgaacgattaatccggctcatgcgtagaggcatgcgcactggccaaacgttgttcctcctgggaatcga 53599074  T
Q  155 acccggtattccccaggtacgtccttagaag 185  Q
    |||||||||||||| ||||||||||| ||||    
T  53599073 acccggtattccccgggtacgtccttggaag 53599043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 56 - 185
Target Start/End: Complemental strand, 2559419 - 2559290
Alignment:
Q  56 cttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaa 155  Q
    |||| ||||||||||| ||| || ||||||||||||| ||||||| ||| | ||||||||||||| ||||||||||  |||||| | | |   |||||||    
T  2559419 ctttcgcaccggtttccgacccaccaaaggtggacgagtaatccggcttgtgcgtagaggcatgcgcactggccaagcgttgttcctcctagaaatcgaa 2559320  T
Q  156 cccggtattccccaggtacgtccttagaag 185  Q
     |||||||||||||||||||||||| ||||    
T  2559319 tccggtattccccaggtacgtccttggaag 2559290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 56 - 185
Target Start/End: Original strand, 7246645 - 7246774
Alignment:
Q  56 cttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaa 155  Q
    |||| ||||||||||| ||| || ||||||||| ||||||||||| || || ||||||||||||| ||||||||||  |||||| ||  |  ||||||||    
T  7246645 ctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcccactaggaatcgaa 7246744  T
Q  156 cccggtattccccaggtacgtccttagaag 185  Q
    ||| ||||||||| ||||||||||| ||||    
T  7246745 cccagtattccccgggtacgtccttggaag 7246774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 53 - 165
Target Start/End: Complemental strand, 38075548 - 38075436
Alignment:
Q  53 ttgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatc 152  Q
    ||||||| ||| ||||||| ||| || ||||||||||| | |||| || || || ||||||||||||| ||||||||||  |||||||||| ||||||||    
T  38075548 ttgctttcgcatcggtttccgacccaccaaaggtggacaattaattcggctcatgcgtagaggcatgcgcactggccaagcgttgtttcccctgagaatc 38075449  T
Q  153 gaacccggtattc 165  Q
    |||||||||||||    
T  38075448 gaacccggtattc 38075436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 53 - 185
Target Start/End: Complemental strand, 52950197 - 52950065
Alignment:
Q  53 ttgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatc 152  Q
    ||||||| ||| ||||||| ||| || ||||||||||||||||||| |  | ||  |||||| ||||| ||||||||||  |||||| ||| || |||||    
T  52950197 ttgctttcgcatcggtttccgacccaccaaaggtggacgactaatctggttcatgtgtagagtcatgcgcactggccaagcgttgttccccctgggaatc 52950098  T
Q  153 gaacccggtattccccaggtacgtccttagaag 185  Q
    ||||||| |||||||||||||||||||| ||||    
T  52950097 gaacccgatattccccaggtacgtccttggaag 52950065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 53 - 180
Target Start/End: Original strand, 5472844 - 5472971
Alignment:
Q  53 ttgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatc 152  Q
    ||||||| ||||| ||||  ||| || ||||||||| ||||||||||| ||  | ||||||||||||| ||||||||||  |||||||||| ||||||||    
T  5472844 ttgctttcgcaccagttttcgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgtttcccctgagaatc 5472943  T
Q  153 gaacccggtattccccaggtacgtcctt 180  Q
     |||| |||||||||| | |||||||||    
T  5472944 aaacctggtattccccggatacgtcctt 5472971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 61 - 164
Target Start/End: Original strand, 40780865 - 40780968
Alignment:
Q  61 gcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccgg 160  Q
    ||||||||||| ||| || ||||||||||||||||||||| || || ||||||||||||| ||||| ||||  |||||| ||| |||||||||||||||     
T  40780865 gcaccggtttccgacccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactgaccaagcgttgttccccttgagaatcgaacccga 40780964  T
Q  161 tatt 164  Q
    ||||    
T  40780965 tatt 40780968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 67 - 180
Target Start/End: Complemental strand, 4736698 - 4736585
Alignment:
Q  67 gtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattcc 166  Q
    ||||| ||| || ||| ||||| |||||||| || ||| |||||||||||||||||| |||||||| |||||||||  ||||||| ||||||||||||||    
T  4736698 gtttccgacccaccaacggtgggcgactaattcggcttgtacgtagaggcatgcacattggccaaacgttgtttccactgagaattgaacccggtattcc 4736599  T
Q  167 ccaggtacgtcctt 180  Q
     | ||||| |||||    
T  4736598 tcgggtacatcctt 4736585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 61 - 185
Target Start/End: Complemental strand, 13073645 - 13073521
Alignment:
Q  61 gcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccgg 160  Q
    ||||||||||| ||| || |||||||  |||||||||| |  | || |||||||| |||| |||||||||||  ||||| |||||| ||||||||| |||    
T  13073645 gcaccggtttccgacccaccaaaggtaaacgactaatctggttcatgcgtagaggtatgcgcactggccaaacattgttccccatgggaatcgaactcgg 13073546  T
Q  161 tattccccaggtacgtccttagaag 185  Q
    ||||| |||||||||||||| ||||    
T  13073545 tattctccaggtacgtccttggaag 13073521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 66 - 185
Target Start/End: Original strand, 36262776 - 36262893
Alignment:
Q  66 ggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattc 165  Q
    |||||||||| || ||||||||| ||||||||||||||  | ||||||||||||  ||||||||||  ||||||  || || ||||||||||||||||||    
T  36262776 ggtttctgacccaccaaaggtgggcgactaatccgactcgtgcgtagaggcatgtgcactggccaagcgttgtt--ccctgggaatcgaacccggtattc 36262873  T
Q  166 cccaggtacgtccttagaag 185  Q
     || ||||||||||| ||||    
T  36262874 tccgggtacgtccttggaag 36262893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 53 - 185
Target Start/End: Complemental strand, 38166142 - 38166010
Alignment:
Q  53 ttgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatc 152  Q
    ||||||| ||||||||||| ||| || ||||||||| ||||||||||| ||  | ||||||| ||||| ||||||||||  |||||| ||| || |||||    
T  38166142 ttgctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagagccatgcgcactggccaagcgttgttccccctgggaatc 38166043  T
Q  153 gaacccggtattccccaggtacgtccttagaag 185  Q
     ||||| ||||||||| | ||||||||| ||||    
T  38166042 caacccagtattccccggatacgtccttggaag 38166010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 56 - 168
Target Start/End: Original strand, 40272330 - 40272442
Alignment:
Q  56 cttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaa 155  Q
    ||||| ||| |||||| ||| || ||| |||| ||||| |||||||||||| ||||||||||||| ||||||||||  |||||| ||||||  |||||||    
T  40272330 cttttacacgggtttccgacccaccaatggtgaacgacaaatccgacttatgcgtagaggcatgcgcactggccaagcgttgttccccatggaaatcgaa 40272429  T
Q  156 cccggtattcccc 168  Q
    |||| ||||||||    
T  40272430 cccgatattcccc 40272442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 56 - 180
Target Start/End: Complemental strand, 43458725 - 43458601
Alignment:
Q  56 cttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaa 155  Q
    |||| ||| ||||||| |||||||||||||||||||||||||||| ||  | ||||||||||||| ||||||||||  ||| || | | || ||||||||    
T  43458725 ctttcgcaacggtttccgactcatcaaaggtggacgactaatccggctcgtccgtagaggcatgcgcactggccaagcgttcttcctcctgggaatcgaa 43458626  T
Q  156 cccggtattccccaggtacgtcctt 180  Q
     || ||||||||||  |||||||||    
T  43458625 tccagtattccccaaatacgtcctt 43458601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 56 - 168
Target Start/End: Complemental strand, 45721198 - 45721086
Alignment:
Q  56 cttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaa 155  Q
    |||| |||||||||||  || ||| |||||||||||||||||||||||| | |||||||||| || || ||||||||  || |||||| ||| ||| |||    
T  45721198 ctttcgcaccggtttccaacccattaaaggtggacgactaatccgacttgtgcgtagaggcacgcgcagtggccaaacattatttcccctgaaaatggaa 45721099  T
Q  156 cccggtattcccc 168  Q
    |||||||||||||    
T  45721098 cccggtattcccc 45721086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 53 - 185
Target Start/End: Complemental strand, 47078573 - 47078441
Alignment:
Q  53 ttgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatc 152  Q
    ||||||| |||| |||||| ||| || ||| ||||  ||||||||||| ||  | ||||||||||||  ||||||||||  |||||| ||| || |||||    
T  47078573 ttgctttcgcactggtttccgacccaccaatggtgagcgactaatccggctcgtgcgtagaggcatgtgcactggccaagcgttgttccccctgggaatc 47078474  T
Q  153 gaacccggtattccccaggtacgtccttagaag 185  Q
    |||||||||||||||| ||||||||||| ||||    
T  47078473 gaacccggtattccccgggtacgtccttggaag 47078441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 53 - 168
Target Start/End: Complemental strand, 16645233 - 16645118
Alignment:
Q  53 ttgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatc 152  Q
    ||||||| ||||||||||| ||| || || |||||| ||||||||| |||| ||  |||||||||||||||||||||||  ||||||   | ||| ||||    
T  16645233 ttgctttcgcaccggtttccgacccaccacaggtgggcgactaatcagactcatgtgtagaggcatgcacactggccaagcgttgttcttcctgaaaatc 16645134  T
Q  153 gaacccggtattcccc 168  Q
    ||||||||||||||||    
T  16645133 gaacccggtattcccc 16645118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 55 - 185
Target Start/End: Complemental strand, 20128422 - 20128292
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| ||||||||||||||| || ||| |||||||||||||||   ||  | |||| |||||||| ||||||||||   ||||| ||| ||||||||||    
T  20128422 gctttcgcaccggtttctgacccaccaatggtggacgactaatctagctcgtgcgtaaaggcatgcgcactggccaagcattgttccccctgagaatcga 20128323  T
Q  155 acccggtattccccaggtacgtccttagaag 185  Q
    |||| ||||||||| | ||||||||| ||||    
T  20128322 acccagtattccccggatacgtccttggaag 20128292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 56 - 185
Target Start/End: Original strand, 8064797 - 8064925
Alignment:
Q  56 cttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaa 155  Q
    |||||||||||||||  |||  || || ||||||||||||||||| || || ||||||||||||| |||||| ||| |||| || ||| || ||||||||    
T  8064797 cttttgcaccggttttcgacctattaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggtcaagtgttattccccttgggaatcgaa 8064896  T
Q  156 cccggtattccccaggtacgtccttagaag 185  Q
    ||| ||||| | ||||||||| ||||||||    
T  8064897 cccagtatt-ctcaggtacgttcttagaag 8064925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 56 - 185
Target Start/End: Original strand, 42722576 - 42722705
Alignment:
Q  56 cttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaa 155  Q
    |||| ||||||||||  ||| ||  ||||||| |||||||||||| || || ||||||||||||| ||||||||||  |||||| | | || |||| |||    
T  42722576 ctttcgcaccggttttcgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctgggaattgaa 42722675  T
Q  156 cccggtattccccaggtacgtccttagaag 185  Q
    ||||||||| ||| ||||||||||| ||||    
T  42722676 cccggtatttcccgggtacgtccttggaag 42722705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 53 - 189
Target Start/End: Original strand, 3159465 - 3159601
Alignment:
Q  53 ttgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatc 152  Q
    ||||||||||||||||||| ||| || ||| ||||  ||||||||| | ||  | ||||||||||||| ||||||||||  |||||| ||| ||  | ||    
T  3159465 ttgcttttgcaccggtttccgacccaccaatggtgagcgactaatctggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccctggaagtc 3159564  T
Q  153 gaacccggtattccccaggtacgtccttagaagttaa 189  Q
    ||||||||||||| || | ||||||||| ||||||||    
T  3159565 gaacccggtattctccggatacgtccttggaagttaa 3159601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 90 - 185
Target Start/End: Original strand, 3574479 - 3574574
Alignment:
Q  90 cgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccaggtacgtccttagaag 185  Q
    ||||||||||||||  | ||||||||||||| |||||||||| |||||||  || || |||| |||| |||||||||| |||||||||||| ||||    
T  3574479 cgactaatccgactcgtgcgtagaggcatgcgcactggccaagtgttgttctccctgggaattgaactcggtattccctaggtacgtccttggaag 3574574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 53 - 176
Target Start/End: Complemental strand, 10541130 - 10541008
Alignment:
Q  53 ttgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatc 152  Q
    ||||||| ||||||||||| ||  |||||||||||| ||| ||||| | ||  | ||||||||||||||||||||||||  |||||||||| ||  ||||    
T  10541130 ttgctttcgcaccggtttccgatccatcaaaggtgg-cgattaatctggctcgtgcgtagaggcatgcacactggccaagcgttgtttcccctggaaatc 10541032  T
Q  153 gaacccggtattccccaggtacgt 176  Q
    ||||||| ||||||  ||||||||    
T  10541031 gaacccgatattccttaggtacgt 10541008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 185
Target Start/End: Complemental strand, 14858823 - 14858694
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| ||||||||||||||| |||||||||||||||| ||||| ||||  ||||||||| ||||| |||||| | ||  ||| | ||| || ||| |||    
T  14858823 gctttcgcaccggtttctgacccatcaaaggtggacgaataatctgactcgtacgtagagacatgcgcactggtc-aagcttgatccccctgggaaccga 14858725  T
Q  155 acccggtattccccaggtacgtccttagaag 185  Q
    ||||||||||| || ||||| ||||| ||||    
T  14858724 acccggtattctccgggtacatccttggaag 14858694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 57 - 139
Target Start/End: Complemental strand, 46108802 - 46108720
Alignment:
Q  57 ttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtt 139  Q
    ||||||| ||||||| ||| ||||||| |||||||||||||| | || || ||||||||||||| |||| |||||||||||||    
T  46108802 ttttgcatcggtttccgacccatcaaaagtggacgactaatctggctcatgcgtagaggcatgcgcactagccaaatgttgtt 46108720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 56 - 185
Target Start/End: Complemental strand, 14124128 - 14123999
Alignment:
Q  56 cttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaa 155  Q
    |||| |||||||||||  || || ||| ||||  ||||||||||| ||  |  |||||||||||| |||||||||||||||||| ||| || ||||||||    
T  14124128 ctttcgcaccggtttccaacccaccaatggtgagcgactaatccggctcgtgtgtagaggcatgcgcactggccaaatgttgttccccctgggaatcgaa 14124029  T
Q  156 cccggtattccccaggtacgtccttagaag 185  Q
    || |||||||| || |||||| ||| ||||    
T  14124028 cctggtattcctcaagtacgttcttggaag 14123999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 53 - 158
Target Start/End: Complemental strand, 16450415 - 16450310
Alignment:
Q  53 ttgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatc 152  Q
    ||||||| ||||||||||| |||  | ||||||||||||||||||| | || || ||||||||||||  ||||||||||  |||||| ||| || |||||    
T  16450415 ttgctttcgcaccggtttccgacctaccaaaggtggacgactaatctggctcatgcgtagaggcatgtgcactggccaagcgttgttccccctgggaatc 16450316  T
Q  153 gaaccc 158  Q
    ||||||    
T  16450315 gaaccc 16450310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 61 - 166
Target Start/End: Complemental strand, 21429408 - 21429303
Alignment:
Q  61 gcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccgg 160  Q
    ||||||||||| ||| || |||||||||||||||| || ||||  | ||||||||||||| ||||||| ||| |||||| ||| | | |||||||||||     
T  21429408 gcaccggtttccgacccaccaaaggtggacgactagtctgactcgtgcgtagaggcatgcgcactggctaaacgttgttccccctaaaaatcgaacccga 21429309  T
Q  161 tattcc 166  Q
    ||||||    
T  21429308 tattcc 21429303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 84 - 185
Target Start/End: Original strand, 41339422 - 41339523
Alignment:
Q  84 ggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccaggtacgtccttaga 183  Q
    ||||| ||||||||||| ||  | ||||||||||| ||||||||||||  |||||| ||| || || ||||||||||||||| || ||||||||||| ||    
T  41339422 ggtgggcgactaatccgtctcgtgcgtagaggcatacacactggccaagcgttgttccccttgggagtcgaacccggtattctccgggtacgtccttgga 41339521  T
Q  184 ag 185  Q
    ||    
T  41339522 ag 41339523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 65 - 185
Target Start/End: Original strand, 26479957 - 26480077
Alignment:
Q  65 cggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtatt 164  Q
    ||||||| || ||||||| | ||||||| |||| || || || |||||||||||||  ||||||||| |||| || ||| | |||||||||| |||||||    
T  26479957 cggtttccgattcatcaatgatggacgattaattcggctcatgcgtagaggcatgcgtactggccaagtgttattccccttaagaatcgaactcggtatt 26480056  T
Q  165 ccccaggtacgtccttagaag 185  Q
    ||||| |||||| ||| ||||    
T  26480057 ccccatgtacgtacttggaag 26480077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 55 - 97
Target Start/End: Complemental strand, 13436917 - 13436875
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaat 97  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  13436917 gcttttgcaccggtttctgacacatcaaaggtggacgactaat 13436875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 55 - 185
Target Start/End: Complemental strand, 38168369 - 38168240
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| |||||||||||  || ||  ||||||| |||||||||||| || || ||||||||||||  ||||||||||  |||||| | | |  |||||||    
T  38168369 gctttcgcaccggtttccaacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgg-cactggccaagcgttgttcctcttaggaatcga 38168271  T
Q  155 acccggtattccccaggtacgtccttagaag 185  Q
    ||| |||||||||| ||||||||||| ||||    
T  38168270 acctggtattccccgggtacgtccttggaag 38168240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 174
Target Start/End: Original strand, 42722406 - 42722495
Alignment:
Q  84 ggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccaggtac 174  Q
    |||||||||||||||||||| || | |||||| |||| |||||| ||| ||||| ||||| || ||||| ||||||||||||||| |||||    
T  42722406 ggtggacgactaatccgactcatgcatagaggtatgcgcactggtcaagtgttg-ttcccctgggaatcaaacccggtattccccgggtac 42722495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 55 - 185
Target Start/End: Original strand, 49260663 - 49260793
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    |||||||||||| |||| ||| || ||||||||| ||||||||||| ||  | ||||||||||||| ||||||||||  |||||| ||| || |||| ||    
T  49260663 gcttttgcaccgatttccgacccaccaaaggtggtcgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccttgggaattga 49260762  T
Q  155 acccggtattccccaggtacgtccttagaag 185  Q
    |  | ||||||||| | ||| ||||| ||||    
T  49260763 attcagtattccccggatacatccttggaag 49260793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 185
Target Start/End: Original strand, 15732499 - 15732576
Alignment:
Q  108 cgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccaggtacgtccttagaag 185  Q
    ||||||||||||  |||||||||| ||||||| |||||  |||||||||||||||||| || | ||||||||| ||||    
T  15732499 cgtagaggcatgtgcactggccaagtgttgttccccatatgaatcgaacccggtattctccggatacgtccttggaag 15732576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 146
Target Start/End: Complemental strand, 17080158 - 17080065
Alignment:
Q  53 ttgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatg 146  Q
    ||||||| ||||||||||  ||  |||||||||||  ||||||||||| || || ||||||||||||| ||||||||||  |||||| ||||||    
T  17080158 ttgctttcgcaccggttttcgatccatcaaaggtgtgcgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttccccatg 17080065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 84 - 185
Target Start/End: Complemental strand, 43468431 - 43468330
Alignment:
Q  84 ggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccaggtacgtccttaga 183  Q
    ||||| ||||||||||| || || |||||||  |||  ||||||||||  |||||| ||| || ||||||||||||||||||||| ||||||| ||| ||    
T  43468431 ggtgggcgactaatccggctcatgcgtagagaaatgtgcactggccaagcgttgttccccctgggaatcgaacccggtattccccgggtacgttcttgga 43468332  T
Q  184 ag 185  Q
    ||    
T  43468331 ag 43468330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 177
Target Start/End: Original strand, 55005304 - 55005426
Alignment:
Q  53 ttgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatc 152  Q
    |||||||||||  |||||| ||| ||||||   ||| ||||||||||||||| | ||||||||||||| || ||| |||  |||||||||| || |||||    
T  55005304 ttgcttttgcattggtttccgacccatcaat--tgggcgactaatccgacttgtgcgtagaggcatgcgcaatggtcaagcgttgtttcccctgcgaatc 55005401  T
Q  153 gaacccggtattccccaggtacgtc 177  Q
    |||  ||||||| ||||| ||||||    
T  55005402 gaattcggtatttcccagatacgtc 55005426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 61 - 185
Target Start/End: Original strand, 295537 - 295660
Alignment:
Q  61 gcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccgg 160  Q
    |||||||||||  || || ||| ||||||||||||||| |  |  | ||||||||||||| ||||||||||| |||| ||||  || |||||||| | ||    
T  295537 gcaccggtttcaaacccaccaacggtggacgactaatctggttcgtgcgtagaggcatgcgcactggccaaacgttg-ttcctctgggaatcgaatctgg 295635  T
Q  161 tattccccaggtacgtccttagaag 185  Q
    |||||||| | ||||||||||||||    
T  295636 tattccccggatacgtccttagaag 295660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 55 - 155
Target Start/End: Complemental strand, 35359849 - 35359749
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| ||||||||||| ||| || | |  |||| |||||||||| |||||| ||| ||||||||| |||||| |||| |||||| ||| ||||||||||    
T  35359849 gctttcgcaccggtttccgacccacctatagtgggcgactaatccaacttatgcgttgaggcatgcgcactggtcaaacgttgttccccctgagaatcga 35359750  T
Q  155 a 155  Q
    |    
T  35359749 a 35359749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 53 - 177
Target Start/End: Original strand, 48015069 - 48015193
Alignment:
Q  53 ttgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatc 152  Q
    ||||||| ||||||||||| ||  |||||||  ||| | ||||||||| ||  | ||||||||| ||| ||||||||||  |||||| ||  || |||||    
T  48015069 ttgctttcgcaccggtttccgatccatcaaaattgggctactaatccggctcgtgcgtagaggcttgcgcactggccaagcgttgttcccactgggaatc 48015168  T
Q  153 gaacccggtattccccaggtacgtc 177  Q
    |||||||||||||| | ||||||||    
T  48015169 gaacccggtattcctcgggtacgtc 48015193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 132
Target Start/End: Original strand, 14597896 - 14597975
Alignment:
Q  53 ttgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaa 132  Q
    ||||||||||||||||||  ||  |||||||||||||||||||||||   |  | ||||||||||||| |||||||||||    
T  14597896 ttgcttttgcaccggttttcgatccatcaaaggtggacgactaatccagttcgtgcgtagaggcatgcgcactggccaaa 14597975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 185
Target Start/End: Original strand, 15839968 - 15840062
Alignment:
Q  90 cgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccaggtacgtccttagaag 185  Q
    ||||||||||| || || ||||||||||||| ||||||||||| ||| ||   |  | |||||||||||||||||||||| |||||||||| ||||    
T  15839968 cgactaatccggctcatgcgtagaggcatgcgcactggccaaacgttattcttctag-gaatcgaacccggtattccccaagtacgtccttggaag 15840062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 177
Target Start/End: Complemental strand, 20421875 - 20421765
Alignment:
Q  66 ggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattc 165  Q
    |||||| ||| |||||| | ||||||| ||||| | || || ||||||||||||| |||||||||| ||||||| ||| ||  ||||||| || ||||||    
T  20421875 ggtttccgacccatcaatgatggacgattaatctggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctggaaatcgaa-ccagtattc 20421777  T
Q  166 cccaggtacgtc 177  Q
    ||||| ||||||    
T  20421776 cccagatacgtc 20421765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 158
Target Start/End: Original strand, 26237432 - 26237523
Alignment:
Q  67 gtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaaccc 158  Q
    ||||| ||| |||||| ||||||| |||||||||||| || |||| || ||| | |||||  |||| |||||||||| ||||||||||||||    
T  26237432 gtttccgacccatcaatggtggactactaatccgactcatgcgtaaagacatacgcactgatcaaacgttgtttcccctgagaatcgaaccc 26237523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 61 - 185
Target Start/End: Original strand, 1940781 - 1940902
Alignment:
Q  61 gcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccgg 160  Q
    ||||||||||  ||| || ||||||||| ||||||||||| ||  | ||||||||||||| |||   ||||  |||||| ||| || ||||||||||||     
T  1940781 gcaccggttttcgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcac---ccaagcgttgttccccctgggaatcgaacccga 1940877  T
Q  161 tattccccaggtacgtccttagaag 185  Q
    |||| ||| ||||||||||| ||||    
T  1940878 tatttcccgggtacgtccttggaag 1940902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 74 - 131
Target Start/End: Complemental strand, 20354731 - 20354674
Alignment:
Q  74 actcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaa 131  Q
    |||||||||  ||||||||||||||||||| || ||||||||||||| |||| |||||    
T  20354731 actcatcaatagtggacgactaatccgactcatgcgtagaggcatgcgcactagccaa 20354674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 152
Target Start/End: Complemental strand, 15829811 - 15829715
Alignment:
Q  56 cttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatc 152  Q
    |||| ||||||||||||||  || ||| |||||| |||||||||| || || | |||| |||||| |||||||||| ||||| ||||| ||| ||||    
T  15829811 ctttcgcaccggtttctgatccaccaatggtggaggactaatccggctcatgcctagaagcatgcgcactggccaagtgttgattcccctgaaaatc 15829715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 139
Target Start/End: Complemental strand, 21192753 - 21192669
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtt 139  Q
    ||||| ||||||||||  |||||| |||| |||| ||| ||||||||||  | ||||||||||||| |||||||| || ||||||    
T  21192753 gctttcgcaccggttttcgactcaccaaatgtgggcgattaatccgactcgtgcgtagaggcatgcgcactggcccaacgttgtt 21192669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 181
Target Start/End: Complemental strand, 30317336 - 30317220
Alignment:
Q  65 cggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtatt 164  Q
    ||||||| ||| || ||||||||| |||||||| || ||  | ||||||||||| |  |||||||||  |||||| ||  ||||||||||||| | ||||    
T  30317336 cggtttccgacccaccaaaggtgggcgactaattcggctcgtgcgtagaggcattcgtactggccaagcgttgttccctctgagaatcgaacctgatatt 30317237  T
Q  165 ccccaggtacgtcctta 181  Q
    ||||  |||||||||||    
T  30317236 ccccgagtacgtcctta 30317220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 185
Target Start/End: Original strand, 41162902 - 41163010
Alignment:
Q  77 catcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccaggtacgt 176  Q
    |||||||||||| |||||||| || || || | |||| ||||| ||||||||||| ||||||| ||  ||  |||||||| ||||||| ||| | |||||    
T  41162902 catcaaaggtgggcgactaattcggctcatgcatagaagcatgtacactggccaagtgttgttccctctggaaatcgaactcggtatttcccggatacgt 41163001  T
Q  177 ccttagaag 185  Q
    |||| ||||    
T  41163002 ccttggaag 41163010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 56 - 139
Target Start/End: Original strand, 2687304 - 2687387
Alignment:
Q  56 cttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtt 139  Q
    |||||||||||||||| ||| || ||  | || | ||||||||||||||||| ||||| |||||| ||||| ||||| ||||||    
T  2687304 cttttgcaccggtttccgacccaccactgatgaatgactaatccgacttatatgtagaagcatgcgcactgaccaaacgttgtt 2687387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 90 - 185
Target Start/End: Complemental strand, 14568037 - 14567942
Alignment:
Q  90 cgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccaggtacgtccttagaag 185  Q
    ||||||||||||||  | |||||||| |||  |||||| |||  ||| ||  || ||||||||||||| |||||||||||  ||||||||||||||    
T  14568037 cgactaatccgactcgtgcgtagaggtatgtgcactggtcaagcgttattctccctgagaatcgaacctggtattccccaaatacgtccttagaag 14567942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 68 - 127
Target Start/End: Complemental strand, 53354632 - 53354573
Alignment:
Q  68 tttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactgg 127  Q
    |||| ||| |||||||| || ||||||||||||| |||| ||||||||||||| ||||||    
T  53354632 tttccgacccatcaaagatgaacgactaatccgatttatgcgtagaggcatgcgcactgg 53354573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 119
Target Start/End: Original strand, 6032647 - 6032705
Alignment:
Q  61 gcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatg 119  Q
    ||||||||||| ||| || ||||||| ||||||||||||| || || ||||||||||||    
T  6032647 gcaccggtttccgacccaccaaaggtagacgactaatccggctcattcgtagaggcatg 6032705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 185
Target Start/End: Original strand, 27531739 - 27531785
Alignment:
Q  139 ttcccatgagaatcgaacccggtattccccaggtacgtccttagaag 185  Q
    |||||||| ||||||||||||||||||||  ||||||||||| ||||    
T  27531739 ttcccatgggaatcgaacccggtattccctgggtacgtccttggaag 27531785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 177
Target Start/End: Complemental strand, 29588849 - 29588727
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| ||| || |||| ||| || ||| ||||||  ||||||||| ||  | ||||||||||||| |||| |||||   ||||||||| || |||||||    
T  29588849 gctttcgcatcgatttccgacccaccaatggtggataactaatccggctcgtgcgtagaggcatgcgcactagccaagctttgtttcccctgggaatcga 29588750  T
Q  155 acccggtattccccaggtacgtc 177  Q
    |||||||||| ||| || |||||    
T  29588749 acccggtatttcccgggcacgtc 29588727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 55 - 128
Target Start/End: Complemental strand, 4738731 - 4738658
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggc 128  Q
    ||||| ||||||||||| ||| || |||||||||||||||||| |  || || ||||||| ||||| |||||||    
T  4738731 gctttcgcaccggtttccgacccaccaaaggtggacgactaattcagctcatgcgtagagacatgcgcactggc 4738658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 55 - 100
Target Start/End: Complemental strand, 4986306 - 4986261
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccg 100  Q
    ||||| ||||| ||||||||| |||||||||| |||||||||||||    
T  4986306 gctttcgcaccagtttctgacccatcaaaggtagacgactaatccg 4986261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 80 - 165
Target Start/End: Original strand, 20532432 - 20532517
Alignment:
Q  80 caaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattc 165  Q
    ||||||||| ||||| ||||| || || ||||||||||||| ||||||||||  |||||| | | ||  |||||||| ||||||||    
T  20532432 caaaggtgggcgacttatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctggaaatcgaactcggtattc 20532517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 185
Target Start/End: Complemental strand, 27248532 - 27248411
Alignment:
Q  62 caccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggt 161  Q
    |||| |||||||||  | ||||||||| ||||||||| | ||  | ||||||||||||| |  |||||||  |||||| | | || || |||||||||||    
T  27248532 caccagtttctgacctaccaaaggtgggcgactaatctggctcctgcgtagaggcatgcgc--tggccaagcgttgttcctcctgggactcgaacccggt 27248435  T
Q  162 attccccaggtacgtccttagaag 185  Q
    ||||||| | ||||||||| ||||    
T  27248434 attccccggatacgtccttggaag 27248411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 129
Target Start/End: Original strand, 48834696 - 48834772
Alignment:
Q  53 ttgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggcc 129  Q
    ||||||| ||||||||||| ||| || ||||||| | |||||||||||||| ||   ||||||||||  ||||||||    
T  48834696 ttgctttcgcaccggtttccgacccaccaaaggtaggcgactaatccgactcatgtatagaggcatgtgcactggcc 48834772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 66; Significance: 3e-29; HSPs: 68)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 55 - 180
Target Start/End: Complemental strand, 47219252 - 47219127
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| ||||||||||| ||| |||||||||||||||||||||||| || || ||||||||||||| |||| |||||  |||||||||| || |||||||    
T  47219252 gctttcgcaccggtttccgacccatcaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactagccaagcgttgtttcccttgggaatcga 47219153  T
Q  155 acccggtattccccaggtacgtcctt 180  Q
    ||| |||||||||| | |||||||||    
T  47219152 acctggtattccccggatacgtcctt 47219127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 55 - 180
Target Start/End: Original strand, 3136693 - 3136817
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| ||||||||||| |||  | |||||||||||||||||||||||| || ||||||||||||| ||||| |||| ||||| ||||| ||| ||||||    
T  3136693 gctttcgcaccggtttccgaccaaccaaaggtggacgactaatccgactcatgcgtagaggcatgcgcactgcccaagtgttg-ttcccctgaaaatcga 3136791  T
Q  155 acccggtattccccaggtacgtcctt 180  Q
    | |||||||||||| |||||||||||    
T  3136792 atccggtattccccgggtacgtcctt 3136817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 56 - 185
Target Start/End: Complemental strand, 45877561 - 45877432
Alignment:
Q  56 cttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaa 155  Q
    |||| ||||||||||| ||| |||||| |||| |||||||||||| || || ||||||||||||  |||||||||| ||||||||||| ||  |||||||    
T  45877561 ctttcgcaccggtttccgacccatcaatggtgaacgactaatccggctcatgcgtagaggcatgtgcactggccaagtgttgtttcccctggaaatcgaa 45877462  T
Q  156 cccggtattccccaggtacgtccttagaag 185  Q
    ||||||||||||| | ||||||||| ||||    
T  45877461 cccggtattccccggatacgtccttggaag 45877432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 55 - 185
Target Start/End: Complemental strand, 25295068 - 25294938
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| |||||||||||  || || ||| ||||||||||||||||| || || | ||||||||||| |||||||||| |||||||||||  ||||||| |    
T  25295068 gctttcgcaccggtttccaacccaccaatggtggacgactaatccggctcatgcatagaggcatgcgcactggccaagtgttgtttccccagagaatcaa 25294969  T
Q  155 acccggtattccccaggtacgtccttagaag 185  Q
    |||||||||||||| | ||||||||| ||||    
T  25294968 acccggtattccccggatacgtccttggaag 25294938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 56 - 185
Target Start/End: Complemental strand, 54261333 - 54261204
Alignment:
Q  56 cttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaa 155  Q
    |||| ||||||||||| ||| ||  ||||||| |||||||||||| || || ||||||||||||| ||||||||||  |||||| | | |  ||||||||    
T  54261333 ctttcgcaccggtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctaggaatcgaa 54261234  T
Q  156 cccggtattccccaggtacgtccttagaag 185  Q
    ||||||||||||||||||||||||| ||||    
T  54261233 cccggtattccccaggtacgtccttggaag 54261204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 55 - 185
Target Start/End: Complemental strand, 7328951 - 7328822
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| ||||||||||  ||| || ||||||||| ||||||||||| || || |||| |||||||| |||||||||| ||||||| ||| || |||||||    
T  7328951 gctttcgcaccggttttcgacccaccaaaggtgggcgactaatccggctcatgcgta-aggcatgcgcactggccaagtgttgttccccctgggaatcga 7328853  T
Q  155 acccggtattccccaggtacgtccttagaag 185  Q
    |||||||||| ||| ||||||||||| ||||    
T  7328852 acccggtatttcccgggtacgtccttggaag 7328822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 55 - 185
Target Start/End: Complemental strand, 15320294 - 15320164
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| ||||||||||||||| || ||||||||| ||||||||||| ||  | ||||||||||||||||||||||||   ||||| | | |   ||||||    
T  15320294 gctttcgcaccggtttctgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcacactggccaatcattgttcctcctcgaaatcga 15320195  T
Q  155 acccggtattccccaggtacgtccttagaag 185  Q
    |||||||||||||| ||||||||||| ||||    
T  15320194 acccggtattccccgggtacgtccttggaag 15320164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 67 - 185
Target Start/End: Original strand, 30767258 - 30767376
Alignment:
Q  67 gtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattcc 166  Q
    ||||| ||| || ||||||||| ||||||||||| ||  | |||||||||||||||||||||||| ||||||| ||| ||  ||||||||||| ||||||    
T  30767258 gtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcacactggccaagtgttgttccccctggaaatcgaacccgatattcc 30767357  T
Q  167 ccaggtacgtccttagaag 185  Q
    |||||||| ||||| ||||    
T  30767358 ccaggtacatccttggaag 30767376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 55 - 168
Target Start/End: Original strand, 28572210 - 28572323
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| ||||||||||| ||| || ||||||||| ||||||||||| ||  | |||||||||||||| |||||||||  |||||||||| || |||||||    
T  28572210 gctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcatactggccaagcgttgtttcccctgggaatcga 28572309  T
Q  155 acccggtattcccc 168  Q
    |||| |||||||||    
T  28572310 acccagtattcccc 28572323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 61 - 185
Target Start/End: Complemental strand, 10040658 - 10040535
Alignment:
Q  61 gcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccgg 160  Q
    |||||||||||  || || |||||||||||||| | |||| ||  | ||||||||||||| ||||||||||  |||||| ||| |||||||||||||||     
T  10040658 gcaccggtttccaacccaccaaaggtggacgaccattccggctcgtgcgtagaggcatgcgcactggccaagcgttgttcccc-tgagaatcgaacccga 10040560  T
Q  161 tattccccaggtacgtccttagaag 185  Q
    |||||||| ||||||||||||||||    
T  10040559 tattccccgggtacgtccttagaag 10040535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 54 - 166
Target Start/End: Complemental strand, 23511676 - 23511564
Alignment:
Q  54 tgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcg 153  Q
    |||||| ||||||||||  ||| |||||||||||||||| |||||||||| || ||||||||||||| |||||| |||| |||| | ||| || ||||||    
T  23511676 tgctttcgcaccggttttcgacccatcaaaggtggacgattaatccgactcatgcgtagaggcatgcgcactggtcaaacgttgctccccttgtgaatcg 23511577  T
Q  154 aacccggtattcc 166  Q
    |||||| ||||||    
T  23511576 aacccgatattcc 23511564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 163
Target Start/End: Complemental strand, 26043920 - 26043812
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| || ||||||||||||||| ||||||||  ||||||||||| || || ||||||||||||| |||||||||| |||||||  || || |||||||    
T  26043920 gctttcgccccggtttctgactcaccaaaggtgagcgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttctccctgggaatcga 26043821  T
Q  155 acccggtat 163  Q
    |||||||||    
T  26043820 acccggtat 26043812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 77 - 185
Target Start/End: Complemental strand, 33251748 - 33251640
Alignment:
Q  77 catcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccaggtacgt 176  Q
    ||||||| |||||||||||||||| || || ||||||||||||||||||||||||| |||||| ||   | |||||||||||||||||||||   |||||    
T  33251748 catcaaatgtggacgactaatccggctcatgcgtagaggcatgcacactggccaaacgttgttcccaccgggaatcgaacccggtattcccctaatacgt 33251649  T
Q  177 ccttagaag 185  Q
    |||| ||||    
T  33251648 ccttggaag 33251640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 65 - 185
Target Start/End: Complemental strand, 49198449 - 49198329
Alignment:
Q  65 cggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtatt 164  Q
    ||||||||||  || ||| ||||||||||||||||| || || ||||||||||||| |||||||||| ||||||| ||| |  |||||||||||||||||    
T  49198449 cggtttctgatccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctaggaatcgaacccggtatt 49198350  T
Q  165 ccccaggtacgtccttagaag 185  Q
    |||| | || |||||| ||||    
T  49198349 ccccggatatgtccttggaag 49198329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 61 - 185
Target Start/End: Complemental strand, 53649829 - 53649705
Alignment:
Q  61 gcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccgg 160  Q
    ||||||||||| ||  ||||||||||| |||||||||||| || || ||||||| || || |||||||||| |||||||  || ||||||||||||||||    
T  53649829 gcaccggtttccgatccatcaaaggtgaacgactaatccggctcatgcgtagagacaggcgcactggccaagtgttgttcaccctgagaatcgaacccgg 53649730  T
Q  161 tattccccaggtacgtccttagaag 185  Q
    ||||||||   ||||||||| ||||    
T  53649729 tattccccgaatacgtccttggaag 53649705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 91 - 185
Target Start/End: Original strand, 11687144 - 11687238
Alignment:
Q  91 gactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccaggtacgtccttagaag 185  Q
    |||||||| |||| |||||||||||||||| ||||||||||   ||||| ||| |||||||| |||||||||||| |||||||||||||| ||||    
T  11687144 gactaatctgactcatacgtagaggcatgcgcactggccaagcattgttccccctgagaatcaaacccggtattctccaggtacgtccttggaag 11687238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 55 - 185
Target Start/End: Complemental strand, 29128027 - 29127897
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| ||| ||||||| ||| || ||||||||| ||||||||||| || || ||||||||||||| ||||| |||| |||||||  || ||  ||||||    
T  29128027 gctttcgcatcggtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgcgcactgaccaagtgttgttctccctggaaatcga 29127928  T
Q  155 acccggtattccccaggtacgtccttagaag 185  Q
    ||||| |||||||||| ||||||||| ||||    
T  29127927 acccgatattccccagatacgtccttggaag 29127897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 63 - 185
Target Start/End: Complemental strand, 29136013 - 29135891
Alignment:
Q  63 accggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggta 162  Q
    |||||||||  || || ||| |||||| |||||||||| || || ||||||||||||| |||||||||| ||||||| ||| || |||||||| ||||||    
T  29136013 accggtttccaacccaccaatggtggaagactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaatccggta 29135914  T
Q  163 ttccccaggtacgtccttagaag 185  Q
    |||||| | ||||||||| ||||    
T  29135913 ttccccggatacgtccttggaag 29135891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 58 - 180
Target Start/End: Original strand, 35923625 - 35923747
Alignment:
Q  58 tttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacc 157  Q
    |||||||||||||  ||  |||||||| |||||||||||| |||||  | | ||||||||||| ||||||||||| |||||| ||| |  ||||||||||    
T  35923625 tttgcaccggttttcgatccatcaaagatggacgactaattcgactcgtgcttagaggcatgcgcactggccaaacgttgttccccctatgaatcgaacc 35923724  T
Q  158 cggtattccccaggtacgtcctt 180  Q
     ||||||| ||||||||||||||    
T  35923725 tggtattctccaggtacgtcctt 35923747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 55 - 180
Target Start/End: Complemental strand, 928708 - 928583
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| |||||| |||  |||||| |||||||||| |||||||||| ||  | ||||| ||||||| |||||| ||| ||||||| ||| ||||||||||    
T  928708 gctttcgcaccgattttcgactcaccaaaggtggatgactaatccggctcgtgcgtagcggcatgcgcactggtcaagtgttgttccccctgagaatcga 928609  T
Q  155 acccggtattccccaggtacgtcctt 180  Q
    | | ||||||||| ||||||||||||    
T  928608 atctggtattccctaggtacgtcctt 928583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 56 - 185
Target Start/End: Complemental strand, 35316063 - 35315934
Alignment:
Q  56 cttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaa 155  Q
    |||| ||| ||||||| ||| || |||| |||| ||||||||||  || || ||||||||||||| |||||||||| ||||||| ||| || ||||||||    
T  35316063 ctttcgcatcggtttccgacccaccaaaagtgggcgactaatccagctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaa 35315964  T
Q  156 cccggtattccccaggtacgtccttagaag 185  Q
    |||| ||||| || ||||||||||| ||||    
T  35315963 cccgatattctccgggtacgtccttggaag 35315934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 55 - 168
Target Start/End: Original strand, 51060280 - 51060393
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| ||||||||||| ||| || ||| ||||||||||||||||   | || ||||||||||||| ||||| |||| ||||||| ||| ||||||||||    
T  51060280 gctttcgcaccggtttccgacccaccaatggtggacgactaatccagttcatgcgtagaggcatgcgcactgaccaagtgttgttccccctgagaatcga 51060379  T
Q  155 acccggtattcccc 168  Q
    ||||| ||||||||    
T  51060380 acccgatattcccc 51060393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 56 - 168
Target Start/End: Original strand, 29762155 - 29762267
Alignment:
Q  56 cttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaa 155  Q
    |||| ||||||||||| ||| || ||| ||||||||||||||||  || || | ||||||||||| |||||||||| ||||||| ||| ||||||||| |    
T  29762155 ctttcgcaccggtttccgacccaccaatggtggacgactaatccagctcatgcatagaggcatgcgcactggccaagtgttgttgcccctgagaatcgga 29762254  T
Q  156 cccggtattcccc 168  Q
    |||| ||||||||    
T  29762255 cccgatattcccc 29762267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 77 - 181
Target Start/End: Complemental strand, 30045907 - 30045803
Alignment:
Q  77 catcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccaggtacgt 176  Q
    |||||||||||||||||||||| ||||  | ||||||| ||||| ||||||||||  |||||| ||| |  |||||||||||||||||||||| ||||||    
T  30045907 catcaaaggtggacgactaatcagactcgtgcgtagagacatgcgcactggccaagcgttgttccccctaggaatcgaacccggtattccccatgtacgt 30045808  T
Q  177 cctta 181  Q
     ||||    
T  30045807 tctta 30045803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 81 - 185
Target Start/End: Complemental strand, 49543601 - 49543497
Alignment:
Q  81 aaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccaggtacgtcctt 180  Q
    |||||||| |||||||| || ||  | ||||||||||||||||||| ||||| |||||| ||||||||||||||||||| |||||||  | |||||||||    
T  49543601 aaaggtgggcgactaattcggctcgtgcgtagaggcatgcacactgaccaaacgttgttccccatgagaatcgaacccgatattcccgggatacgtcctt 49543502  T
Q  181 agaag 185  Q
     ||||    
T  49543501 ggaag 49543497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 90 - 185
Target Start/End: Complemental strand, 6462485 - 6462390
Alignment:
Q  90 cgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccaggtacgtccttagaag 185  Q
    ||||||||||| || || ||||||||||||| ||||||||||  ||||||  || || ||||||||||||||||||||||| ||||||||| ||||    
T  6462485 cgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttctccctgtgaatcgaacccggtattccccagatacgtccttggaag 6462390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 90 - 185
Target Start/End: Original strand, 26207835 - 26207930
Alignment:
Q  90 cgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccaggtacgtccttagaag 185  Q
    ||||||||||| || || |||||||||||||||||||| |||  |||||| ||| || ||||||||||||||||||||| ||||| ||||| ||||    
T  26207835 cgactaatccggctcatgcgtagaggcatgcacactggacaagcgttgttccccgtgggaatcgaacccggtattccccgggtacatccttggaag 26207930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 110 - 180
Target Start/End: Original strand, 46529924 - 46529994
Alignment:
Q  110 tagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccaggtacgtcctt 180  Q
    ||||||||||||||||||| ||   ||||||||  ||||||||||||||||||||||||||||||||||||    
T  46529924 tagaggcatgcacactggcgaagcattgtttcctctgagaatcgaacccggtattccccaggtacgtcctt 46529994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 56 - 185
Target Start/End: Complemental strand, 47471938 - 47471810
Alignment:
Q  56 cttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaa 155  Q
    |||| ||| ||||||| ||| || |||||||||||||||||| || || || |||||| |||||| |||| |||||   ||||| ||| || ||||||||    
T  47471938 ctttcgcatcggtttccgacccaccaaaggtggacgactaattcggctcatgcgtagaagcatgcgcactagccaagcattgttcccc-tgggaatcgaa 47471840  T
Q  156 cccggtattccccaggtacgtccttagaag 185  Q
    |||||||||||| |||||||||||| ||||    
T  47471839 cccggtattccctaggtacgtccttggaag 47471810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 53 - 185
Target Start/End: Complemental strand, 48342130 - 48341998
Alignment:
Q  53 ttgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatc 152  Q
    ||||||| ||||| ||||| ||  || ||||| ||||||||||||| |  | || ||||||||||||| |||| |||||  |||||| ||| |  ||||     
T  48342130 ttgctttcgcacctgtttccgatccaccaaagatggacgactaatctggttcatgcgtagaggcatgcgcactagccaagcgttgttccccctaggaata 48342031  T
Q  153 gaacccggtattccccaggtacgtccttagaag 185  Q
    |||||||||||||||||||||||||||| ||||    
T  48342030 gaacccggtattccccaggtacgtccttggaag 48341998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 185
Target Start/End: Original strand, 7310702 - 7310832
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| ||| ||||||| ||| || ||||| ||  ||||||||||| ||  | ||||||||||||||||| || ||| ||||||| ||  || |||||||    
T  7310702 gctttcgcatcggtttccgacccaccaaagatgagcgactaatccggctcgtgcgtagaggcatgcacaccgggcaagtgttgttcccactgggaatcga 7310801  T
Q  155 acccggtattccccaggtacgtccttagaag 185  Q
    |||||||||||| ||||||||| ||| ||||    
T  7310802 acccggtattcctcaggtacgttcttggaag 7310832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 57 - 158
Target Start/End: Original strand, 50405604 - 50405705
Alignment:
Q  57 ttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaac 156  Q
    ||||||||||||||| ||| || ||| ||||| ||||||||||||||  | ||||||||||||| |||||| |||  |||||||||| |  |||||||||    
T  50405604 ttttgcaccggtttccgacccaccaatggtgggcgactaatccgactcgtgcgtagaggcatgcgcactggtcaagcgttgtttcccctcggaatcgaac 50405703  T
Q  157 cc 158  Q
    ||    
T  50405704 cc 50405705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 62 - 166
Target Start/End: Original strand, 26361973 - 26362077
Alignment:
Q  62 caccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggt 161  Q
    |||||||||| ||| |||||||||||  ||||||||||| ||  | ||||||||||||||||||| ||||| |||||| ||| || ||||| |||| | |    
T  26361973 caccggtttccgacccatcaaaggtgtgcgactaatccggctcgtgcgtagaggcatgcacactgaccaaacgttgttccccttgggaatcaaacctgat 26362072  T
Q  162 attcc 166  Q
    |||||    
T  26362073 attcc 26362077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 61 - 180
Target Start/End: Original strand, 3507538 - 3507657
Alignment:
Q  61 gcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccgg 160  Q
    ||||||||||| ||| || ||||||||  ||||||||||| ||  | ||||||||||||| |||||||||| ||||||| ||  |  ||||| |||||||    
T  3507538 gcaccggtttccgacccaccaaaggtgagcgactaatccggctcgtgcgtagaggcatgcgcactggccaagtgttgttccctctaggaatcaaacccgg 3507637  T
Q  161 tattccccaggtacgtcctt 180  Q
    |||||||   ||||||||||    
T  3507638 tattccctgtgtacgtcctt 3507657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 180
Target Start/End: Complemental strand, 7650337 - 7650210
Alignment:
Q  53 ttgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatc 152  Q
    ||||||| |||||||||||  || || ||||||||| ||||||||||| ||  | ||||||| ||| |  ||||||||| ||||||| ||| ||  ||||    
T  7650337 ttgctttcgcaccggtttccaacccaccaaaggtgggcgactaatccggctcgtgcgtagagacattcgtactggccaagtgttgttccccctggaaatc 7650238  T
Q  153 gaacccggtattccccaggtacgtcctt 180  Q
    ||||||||||||||| | |||| |||||    
T  7650237 gaacccggtattccctaagtacatcctt 7650210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 61 - 168
Target Start/End: Complemental strand, 8362679 - 8362572
Alignment:
Q  61 gcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccgg 160  Q
    ||||||||||| ||  ||  |||||||||||||||||  | || || |||||||||||||  |||||||||| |||||||||  || |||| ||||||||    
T  8362679 gcaccggtttcggatccactaaaggtggacgactaatttggctcatgcgtagaggcatgcggactggccaaacgttgtttccactgggaattgaacccgg 8362580  T
Q  161 tattcccc 168  Q
    ||||||||    
T  8362579 tattcccc 8362572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 56 - 127
Target Start/End: Original strand, 45450447 - 45450518
Alignment:
Q  56 cttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactgg 127  Q
    |||| |||||||||||  |||||||||||||||||||||||||   ||||| ||||||||||||| ||||||    
T  45450447 ctttcgcaccggtttccaactcatcaaaggtggacgactaatctagcttatgcgtagaggcatgcgcactgg 45450518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 63 - 145
Target Start/End: Original strand, 43330739 - 43330821
Alignment:
Q  63 accggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccat 145  Q
    |||||||| |||| || ||||||||| ||||||||||| ||  | ||||||||||||| |||||| ||| |||||||||||||    
T  43330739 accggtttttgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggtcaagtgttgtttcccat 43330821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 53 - 167
Target Start/End: Original strand, 55069676 - 55069790
Alignment:
Q  53 ttgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatc 152  Q
    ||||||||||||||||||| ||| || ||||||||  ||| ||||||| ||  | ||||||||||||  ||||||||||| |||||| || ||  |||||    
T  55069676 ttgcttttgcaccggtttccgacccaccaaaggtgagcgattaatccggctcgtgcgtagaggcatgtgcactggccaaacgttgttccctataggaatc 55069775  T
Q  153 gaacccggtattccc 167  Q
     ||||| ||||||||    
T  55069776 aaacccagtattccc 55069790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 160
Target Start/End: Original strand, 24506647 - 24506751
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||||||||||||||| ||| || ||| ||||  ||||||||| |||| || ||||||||||||  |||||| |||  |||||||||| ||| ||||||    
T  24506647 gcttttgcaccggtttccgacccaccaatggtgagcgactaatctgactcatgcgtagaggcatgtgcactggtcaagcgttgtttccc-tgaaaatcga 24506745  T
Q  155 acccgg 160  Q
    ||||||    
T  24506746 acccgg 24506751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 62 - 143
Target Start/End: Original strand, 34374448 - 34374529
Alignment:
Q  62 caccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttccc 143  Q
    |||||||||| ||| || |||||  || ||||||||||||||||| ||| ||||||||| ||||| |||| |||||||||||    
T  34374448 caccggtttccgacccaccaaagaagggcgactaatccgacttatgcgttgaggcatgcgcactgaccaagtgttgtttccc 34374529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 80 - 180
Target Start/End: Complemental strand, 3755653 - 3755553
Alignment:
Q  80 caaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccaggtacgtcct 179  Q
    ||||||| ||||||||||||| || || ||||||| ||||| |||||| |||| |||||| | | || ||||||||  ||||||||||| | ||||||||    
T  3755653 caaaggtagacgactaatccggctcatgcgtagagacatgcgcactggtcaaacgttgttcctcctgggaatcgaagtcggtattccccggatacgtcct 3755554  T
Q  180 t 180  Q
    |    
T  3755553 t 3755553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 53 - 185
Target Start/End: Original strand, 15795491 - 15795622
Alignment:
Q  53 ttgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatc 152  Q
    ||||||||||||||||||  ||| || ||  ||||| |||||||| |  ||  | ||||||||||||| ||||| ||||  |||||| ||| || |||||    
T  15795491 ttgcttttgcaccggttttcgacccaccattggtgggcgactaattcagctcgtgcgtagaggcatgcgcactgaccaagcgttgttcccc-tgggaatc 15795589  T
Q  153 gaacccggtattccccaggtacgtccttagaag 185  Q
    |||| ||||||||||| ||||||||||| ||||    
T  15795590 gaactcggtattccccgggtacgtccttggaag 15795622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 55 - 127
Target Start/End: Original strand, 49021202 - 49021274
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactgg 127  Q
    ||||| ||||||||||| ||| || ||| ||||||||||||||||| || || ||||||||||||| ||||||    
T  49021202 gctttcgcaccggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactgg 49021274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 171
Target Start/End: Complemental strand, 8164636 - 8164545
Alignment:
Q  80 caaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccagg 171  Q
    ||||||||| ||||||||||||||  | |||| |||||||| ||||||||||  |||||| ||| |   ||| |||||||||||||||||||    
T  8164636 caaaggtgggcgactaatccgactcgtgcgtaaaggcatgcgcactggccaagcgttgttccccttagaaattgaacccggtattccccagg 8164545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 57 - 180
Target Start/End: Complemental strand, 33689057 - 33688934
Alignment:
Q  57 ttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaac 156  Q
    |||||||||||||||  || || ||| |||||| |||||| | | || || ||||||||||||| |||||||||| |||| || ||| |  |||| ||||    
T  33689057 ttttgcaccggtttccaacccaccaatggtggatgactaaactggctcatgcgtagaggcatgcgcactggccaagtgttattccccttaggaattgaac 33688958  T
Q  157 ccggtattccccaggtacgtcctt 180  Q
    ||| |||||||| | |||||||||    
T  33688957 ccgatattcccccgatacgtcctt 33688934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 185
Target Start/End: Original strand, 42412808 - 42412903
Alignment:
Q  90 cgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccaggtacgtccttagaag 185  Q
    ||||||||||| || || ||||||||||||  |||| |||||  |||||| |||  | ||||||||||||||||||||| | ||||||||| ||||    
T  42412808 cgactaatccggctcatgcgtagaggcatgggcacttgccaagcgttgttccccccgggaatcgaacccggtattccccggatacgtccttggaag 42412903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 124
Target Start/End: Original strand, 50753338 - 50753409
Alignment:
Q  53 ttgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacac 124  Q
    ||||||||||||||||||| ||| || ||| | || |||||||||||||||  | |||||||||||||||||    
T  50753338 ttgcttttgcaccggtttccgacccaccaatgatgaacgactaatccgactcgtgcgtagaggcatgcacac 50753409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 55 - 177
Target Start/End: Original strand, 35998570 - 35998691
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| ||||||||||||||| ||  |||||||||||| |||||| |||  | ||||||||||||  |||||  |||  ||||||||||  || |||| |    
T  35998570 gctttcgcaccggtttctgacccactaaaggtggacgattaatccaactcgtgcgtagaggcatgtgcactgatcaagcgttgtttccctcga-aatcaa 35998668  T
Q  155 acccggtattccccaggtacgtc 177  Q
    ||||||||||| || ||||||||    
T  35998669 acccggtattctccgggtacgtc 35998691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 57 - 159
Target Start/End: Original strand, 41223039 - 41223140
Alignment:
Q  57 ttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaac 156  Q
    |||||||||| |||| ||  ||| |||| | | ||| ||||| ||||||| ||||||||||||| || |||||||| |||||||||| ||| ||||||||    
T  41223039 ttttgcaccgatttccgatccattaaagataggcgattaatcagacttatgcgtagaggcatgcgcattggccaaacgttgtttccc-tgataatcgaac 41223137  T
Q  157 ccg 159  Q
    |||    
T  41223138 ccg 41223140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 55 - 185
Target Start/End: Original strand, 47749104 - 47749233
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| ||| ||||||| |||  | ||||||||| |||||||| || ||  | ||||||||||||| ||||||||||  |||| ||||| |  |||||||    
T  47749104 gctttcgcatcggtttccgacctaccaaaggtgggcgactaattcggctcgtgcgtagaggcatgcgcactggccaagagttg-ttcccctaggaatcga 47749202  T
Q  155 acccggtattccccaggtacgtccttagaag 185  Q
    |||||||||||||  | ||||||||| ||||    
T  47749203 acccggtattccctggatacgtccttggaag 47749233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 81 - 174
Target Start/End: Original strand, 45402376 - 45402469
Alignment:
Q  81 aaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccaggtac 174  Q
    ||||||| |||||||||||| || || ||||||||||||| ||| |||| | ||||||| ||  |  |||||||||||| |||||||| |||||    
T  45402376 aaaggtgaacgactaatccggctcatgcgtagaggcatgcgcacaggccgagtgttgttccctctaggaatcgaacccgatattccccgggtac 45402469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 55 - 180
Target Start/End: Complemental strand, 54237556 - 54237431
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| ||||||||||| ||| ||  || ||||||||||| ||||| || || ||||||| ||||| ||||| |||| |||||||  || ||| ||||||    
T  54237556 gctttcgcaccggtttccgacccactaatggtggacgacttatccggctcatgcgtagagacatgcgcactgaccaagtgttgttctccctgaaaatcga 54237457  T
Q  155 acccggtattccccaggtacgtcctt 180  Q
     |||| |||| ||| | |||||||||    
T  54237456 ccccgatatttcccggatacgtcctt 54237431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 185
Target Start/End: Original strand, 7612987 - 7613055
Alignment:
Q  117 atgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccaggtacgtccttagaag 185  Q
    |||| |||| |||||  |||||| ||| || |||||||||||||||||||||| |||||||||| ||||    
T  7612987 atgcgcactagccaagcgttgttccccctgggaatcgaacccggtattccccaagtacgtccttggaag 7613055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 15285730 - 15285802
Alignment:
Q  53 ttgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacact 125  Q
    |||||||  ||||| |||||||  ||||||||||| ||||||||||| ||||||  |||||||||||| ||||    
T  15285730 ttgctttctcaccgatttctgatccatcaaaggtgaacgactaatccaacttatgtgtagaggcatgcgcact 15285802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 185
Target Start/End: Original strand, 34662344 - 34662448
Alignment:
Q  81 aaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccaggtacgtcctt 180  Q
    ||||||||||||||||| || || || | ||||| |||||  |||| ||||| ||| || | | ||| ||||||||||| ||||||||| ||||||||||    
T  34662344 aaaggtggacgactaattcggctcatgcatagagacatgcgtactgaccaaacgttattcctcctgaaaatcgaacccgatattccccaagtacgtcctt 34662443  T
Q  181 agaag 185  Q
     ||||    
T  34662444 ggaag 34662448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 185
Target Start/End: Complemental strand, 39849149 - 39849050
Alignment:
Q  85 gtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccaggtacgtccttagaa 184  Q
    |||| ||||||||||| || || ||||||||||||||||||||||||  |||| ||||  || ||||||||||||  ||||||   |||||||||| |||    
T  39849149 gtgggcgactaatccggctcatgcgtagaggcatgcacactggccaagcgttg-ttcctctgggaatcgaacccgaaattccctgagtacgtccttggaa 39849051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 165
Target Start/End: Complemental strand, 40944976 - 40944881
Alignment:
Q  69 ttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattc 165  Q
    ||||||| || ||||||||  ||||||||||| || || |||||||||||||| |||||  || ||||||| ||| || ||||||||| ||||||||    
T  40944976 ttctgacccaccaaaggtgagcgactaatccg-ctcatgcgtagaggcatgcatactggttaagtgttgttccccctgggaatcgaactcggtattc 40944881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 164
Target Start/End: Original strand, 41630536 - 41630620
Alignment:
Q  80 caaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtatt 164  Q
    ||||||||| ||||||||||| || ||  |||||||||||| |||||| |||  |||||| ||| || |||| ||||||||||||    
T  41630536 caaaggtgggcgactaatccggctcatgtgtagaggcatgcgcactgggcaagcgttgttccccttgggaattgaacccggtatt 41630620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 185
Target Start/End: Original strand, 52364821 - 52364929
Alignment:
Q  77 catcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccaggtacgt 176  Q
    |||||||||| ||||| ||||||  ||  | ||||||||||||| |||||| |||  |||||| |   || ||||||||| ||||||||||| |||||||    
T  52364821 catcaaaggtagacgattaatccagctcgtgcgtagaggcatgcgcactggtcaagcgttgttccttctgggaatcgaactcggtattccccgggtacgt 52364920  T
Q  177 ccttagaag 185  Q
    |||| ||||    
T  52364921 ccttggaag 52364929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 109 - 180
Target Start/End: Original strand, 26590319 - 26590390
Alignment:
Q  109 gtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccaggtacgtcctt 180  Q
    |||||||||||||||||| ||||  |||||| ||| ||||||||||||||  |||||  | |||||||||||    
T  26590319 gtagaggcatgcacactgaccaagcgttgttccccctgagaatcgaacccaatattcttcgggtacgtcctt 26590390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 57 - 164
Target Start/End: Original strand, 40660328 - 40660435
Alignment:
Q  57 ttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaac 156  Q
    ||||||||||||||  ||| || |||||||| | || |||||||  | || ||||||||||||| ||||| |||||||||||| | | |  ||||||||     
T  40660328 ttttgcaccggttttcgacccaccaaaggtgaatgattaatccggttcatgcgtagaggcatgcgcactgaccaaatgttgttcctcctaggaatcgaat 40660427  T
Q  157 ccggtatt 164  Q
    ||||||||    
T  40660428 ccggtatt 40660435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 31138104 - 31138162
Alignment:
Q  65 cggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcaca 123  Q
    ||||||| |||||||||| | ||||||| ||||| ||||||| | ||||||||||||||    
T  31138104 cggtttccgactcatcaatgatggacgattaatctgacttatgcatagaggcatgcaca 31138162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 68 - 185
Target Start/End: Original strand, 24146340 - 24146457
Alignment:
Q  68 tttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccc 167  Q
    |||| ||| |||||| |||||||||||||| || || ||   |||||||||||  | || |||| |||||||  || |||||||| |||||| |||||||    
T  24146340 tttccgacccatcaatggtggacgactaattcggctcatgtctagaggcatgcgtattgaccaagtgttgttatccttgagaatcaaacccgatattccc 24146439  T
Q  168 caggtacgtccttagaag 185  Q
    ||| || |||||| ||||    
T  24146440 cagatatgtccttggaag 24146457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 108 - 165
Target Start/End: Complemental strand, 43738499 - 43738442
Alignment:
Q  108 cgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattc 165  Q
    ||||||||||| ||||||| | || |||||||| |  |||||||||||||||||||||    
T  43738499 cgtagaggcatacacactgactaagtgttgttttctctgagaatcgaacccggtattc 43738442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 55 - 120
Target Start/End: Complemental strand, 44064652 - 44064587
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgc 120  Q
    ||||||||||||||||| ||| || ||||||||  |||||||||||  | || |||||||||||||    
T  44064652 gcttttgcaccggtttccgacccaccaaaggtgagcgactaatccggttcatgcgtagaggcatgc 44064587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 80 - 180
Target Start/End: Original strand, 32873573 - 32873672
Alignment:
Q  80 caaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccaggtacgtcct 179  Q
    ||||||||| ||||||||| | || |||||||||||||||  |||||| |||  ||||||  || |  |||||||||| |||||| ||| ||||||||||    
T  32873573 caaaggtgggcgactaatctggctcatacgtagaggcatgtgcactggtcaagcgttgttctccctaggaatcgaacctggtatt-cccgggtacgtcct 32873671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 109 - 185
Target Start/End: Complemental strand, 49082878 - 49082802
Alignment:
Q  109 gtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccaggtacgtccttagaag 185  Q
    ||||| |||||| ||||||| ||  ||||||  || || ||||||||| ||||||||||| | ||||||||||||||    
T  49082878 gtagatgcatgcgcactggctaagcgttgttctccctgggaatcgaactcggtattccccggatacgtccttagaag 49082802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 53 - 185
Target Start/End: Complemental strand, 683 - 551
Alignment:
Q  53 ttgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatc 152  Q
    ||||||| ||||||||||| ||| || ||||||||  ||||||||| | || ||||||||||||||||||||||  ||| ||||||| ||| || |||||    
T  683 ttgctttcgcaccggtttccgacccaccaaaggtgagcgactaatctggctcatacgtagaggcatgcacactgatcaagtgttgttccccctgcgaatc 584  T
Q  153 gaacccggtattccccaggtacgtccttagaag 185  Q
    |||||||||||||||| ||||||||||| ||||    
T  583 gaacccggtattccccgggtacgtccttggaag 551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 55 - 185
Target Start/End: Complemental strand, 319533 - 319403
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| ||||||||||| | | || ||||||||||||||||||||  || || | |||||| |||| ||||||||||  |||||| ||| |   |||| |    
T  319533 gctttcgcaccggtttccgccccaccaaaggtggacgactaatccagctcatgcatagagggatgcgcactggccaagcgttgttccccctagaaatcaa 319434  T
Q  155 acccggtattccccaggtacgtccttagaag 185  Q
    |||||||||||||| | ||||||||| ||||    
T  319433 acccggtattccccggatacgtccttggaag 319403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 63; Significance: 2e-27; HSPs: 63)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 55 - 185
Target Start/End: Complemental strand, 42086436 - 42086306
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| ||||||||||| ||| || ||||||||||||||||||||| || || ||||||||||||| |||||| |||  |||||| ||| || |||||||    
T  42086436 gctttcgcaccggtttccgacccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggtcaagcgttgttccccctgggaatcga 42086337  T
Q  155 acccggtattccccaggtacgtccttagaag 185  Q
    |||||||||||| | ||||||||||| ||||    
T  42086336 acccggtattcctcgggtacgtccttggaag 42086306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 55 - 185
Target Start/End: Original strand, 5731918 - 5732048
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| ||||||||||| ||| ||  ||||||| |||||||||| | || |||||||||||||||| ||||||||||  |||||| | | || |||||||    
T  5731918 gctttcgcaccggtttccgacccactaaaggtgaacgactaatctggctcatacgtagaggcatgcgcactggccaagcgttgttcctcctgggaatcga 5732017  T
Q  155 acccggtattccccaggtacgtccttagaag 185  Q
    |||||||||||||| ||||||||||| ||||    
T  5732018 acccggtattccccgggtacgtccttggaag 5732048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 55 - 185
Target Start/End: Complemental strand, 9812981 - 9812851
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| ||||||||||||||| || ||||||||| |||||||||||  | || |||||| |||||||||||||||||  |||||| | | |  |||||||    
T  9812981 gctttcgcaccggtttctgacccaccaaaggtgggcgactaatccggttcatgcgtagaagcatgcacactggccaagcgttgttcctcctcggaatcga 9812882  T
Q  155 acccggtattccccaggtacgtccttagaag 185  Q
    |||||||||||||| ||||||||||| ||||    
T  9812881 acccggtattccccgggtacgtccttggaag 9812851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 55 - 185
Target Start/End: Complemental strand, 12766240 - 12766110
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| ||||||||||||||| || ||||||||| ||||||||| |  | || ||||||||||||||||||||||||   ||||| | | | ||||||||    
T  12766240 gctttcgcaccggtttctgacccaccaaaggtgggcgactaatctggttcatgcgtagaggcatgcacactggccaagcattgttcctcctcagaatcga 12766141  T
Q  155 acccggtattccccaggtacgtccttagaag 185  Q
    |||||||||||||| ||||||||||| ||||    
T  12766140 acccggtattccccgggtacgtccttggaag 12766110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 55 - 168
Target Start/End: Complemental strand, 1538540 - 1538427
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| ||||||||||| ||| || ||| ||||||||| ||||||| || || ||||||||||||| |||||||||| ||||||| ||| || |||||||    
T  1538540 gctttcgcaccggtttccgacccaccaatggtggacgattaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcga 1538441  T
Q  155 acccggtattcccc 168  Q
    ||||||||||||||    
T  1538440 acccggtattcccc 1538427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 55 - 176
Target Start/End: Complemental strand, 39728496 - 39728375
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||||||||||||||| |||  ||||||||||  |||||||| |||||    |||||||||||||||||||||||| ||||||||||  ||| ||||||    
T  39728496 gcttttgcaccggtttccgacgtatcaaaggtgagcgactaattcgactcgagcgtagaggcatgcacactggccaagtgttgtttcctctgataatcga 39728397  T
Q  155 acccggtattccccaggtacgt 176  Q
    ||| |||||||||| |||||||    
T  39728396 acctggtattccccgggtacgt 39728375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 53 - 185
Target Start/End: Complemental strand, 8513630 - 8513498
Alignment:
Q  53 ttgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatc 152  Q
    ||||||| ||||||||||| ||| || ||||||||||||||||||| | ||  | ||||||||||||  ||||||||||   ||||||||| |  |||||    
T  8513630 ttgctttcgcaccggtttccgacccaccaaaggtggacgactaatctggctcgtgcgtagaggcatgtgcactggccaagcattgtttcccctaggaatc 8513531  T
Q  153 gaacccggtattccccaggtacgtccttagaag 185  Q
    |||||||||||||||| ||||||||||| ||||    
T  8513530 gaacccggtattccccgggtacgtccttggaag 8513498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 80 - 184
Target Start/End: Original strand, 14974347 - 14974451
Alignment:
Q  80 caaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccaggtacgtcct 179  Q
    ||||||||||||||||||||| || || ||||||||||||  |||||||||||||||||| ||| | ||||||||||||| ||||| || | ||||||||    
T  14974347 caaaggtggacgactaatccggctcatgcgtagaggcatgtgcactggccaaatgttgttcccctttagaatcgaacccgatattctccggatacgtcct 14974446  T
Q  180 tagaa 184  Q
    |||||    
T  14974447 tagaa 14974451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 77 - 185
Target Start/End: Complemental strand, 15034162 - 15034054
Alignment:
Q  77 catcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccaggtacgt 176  Q
    |||||||||||||| ||||||| | || || ||||||||||||||||||| |||| ||||||||||||||  ||| |||||||||||||||| ||||| |    
T  15034162 catcaaaggtggacaactaatcaggctcatgcgtagaggcatgcacactgaccaagtgttgtttcccatggaaattgaacccggtattccccgggtacat 15034063  T
Q  177 ccttagaag 185  Q
    |||| ||||    
T  15034062 ccttggaag 15034054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 55 - 165
Target Start/End: Complemental strand, 9805113 - 9805003
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| ||||| ||||| ||| || ||||||||||||||||||||| || || ||||||||||||| ||||||||||  |||||| ||| || |||||||    
T  9805113 gctttcgcacctgtttccgacccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttccccctgggaatcga 9805014  T
Q  155 acccggtattc 165  Q
    |||||||||||    
T  9805013 acccggtattc 9805003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 55 - 185
Target Start/End: Complemental strand, 12705123 - 12704993
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| ||||||||||||||| || ||||||||| |||||||||||  | || |||||| ||||||||||||| |||  |||||| | | |  |||||||    
T  12705123 gctttcgcaccggtttctgacccaccaaaggtgggcgactaatccggttcatgcgtagaagcatgcacactggtcaagcgttgttcctcctcggaatcga 12705024  T
Q  155 acccggtattccccaggtacgtccttagaag 185  Q
    |||||||||||||| ||||||||||| ||||    
T  12705023 acccggtattccccgggtacgtccttggaag 12704993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 55 - 184
Target Start/End: Complemental strand, 20255478 - 20255349
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| ||||| ||||| |||||| |||||||||||||||||||||||| || ||||||||||||| |||||| ||| |||||||   | ||||   |||    
T  20255478 gctttcgcaccagtttccgactcaccaaaggtggacgactaatccgactcatgcgtagaggcatgcgcactggtcaagtgttgttcgtcctgagttacga 20255379  T
Q  155 acccggtattccccaggtacgtccttagaa 184  Q
     |||||||||||||  ||||||||||||||    
T  20255378 ccccggtattccccgagtacgtccttagaa 20255349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 53 - 185
Target Start/End: Complemental strand, 12082019 - 12081887
Alignment:
Q  53 ttgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatc 152  Q
    |||||||  ||||| |||| |||||| |||||||||||||||||| || ||  | |||||| |||||| ||||||||||  |||||| ||| ||||||||    
T  12082019 ttgctttcacaccgatttccgactcaccaaaggtggacgactaattcggctcgtgcgtagatgcatgcgcactggccaagcgttgttccccctgagaatc 12081920  T
Q  153 gaacccggtattccccaggtacgtccttagaag 185  Q
    |||||| ||||||||| | ||||||||| ||||    
T  12081919 gaacccagtattccccggatacgtcctttgaag 12081887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 61 - 185
Target Start/End: Complemental strand, 37263343 - 37263220
Alignment:
Q  61 gcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccgg 160  Q
    ||||||||||| ||  ||  |||||||||||||||||||| ||  | ||||||||||||| || |||||||  |||| ||||| |||||||||||||||     
T  37263343 gcaccggtttccgatccaataaaggtggacgactaatccggctcgtgcgtagaggcatgcgcattggccaagcgttg-ttcccctgagaatcgaacccga 37263245  T
Q  161 tattccccaggtacgtccttagaag 185  Q
    |||||||| ||||||||||||||||    
T  37263244 tattccccgggtacgtccttagaag 37263220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 50 - 185
Target Start/End: Original strand, 25417176 - 25417311
Alignment:
Q  50 ttcttgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgaga 149  Q
    ||||| |||| ||||||||||||||| || ||| |||  | |||||||||| ||  | ||||||||||||| ||||||||||  |||||| ||| || ||    
T  25417176 ttctttctttcgcaccggtttctgacccaccaatggtaaatgactaatccggctcgttcgtagaggcatgcgcactggccaagcgttgttccccctggga 25417275  T
Q  150 atcgaacccggtattccccaggtacgtccttagaag 185  Q
    |||||||||||||||||||  |||||||||| ||||    
T  25417276 atcgaacccggtattccccgagtacgtccttggaag 25417311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 53 - 168
Target Start/End: Complemental strand, 38369810 - 38369696
Alignment:
Q  53 ttgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatc 152  Q
    ||||||| |||||| ||||| || ||||||||||||   ||||||||||||  | ||||||||||||| |||||||||| ||||| ||||| ||||||||    
T  38369810 ttgctttcgcaccgatttctaacccatcaaaggtgggttactaatccgactcgtgcgtagaggcatgcgcactggccaagtgttg-ttcccctgagaatc 38369712  T
Q  153 gaacccggtattcccc 168  Q
    ||||||| ||||||||    
T  38369711 gaacccgatattcccc 38369696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 55 - 185
Target Start/End: Complemental strand, 13664369 - 13664239
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| ||||||||||| ||| || ||||||||  ||| ||||| | || || ||||||||||||| |||||||||| ||||||| ||| ||| ||||||    
T  13664369 gctttcgcaccggtttccgacacaccaaaggtgatcgattaatctggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgataatcga 13664270  T
Q  155 acccggtattccccaggtacgtccttagaag 185  Q
    | ||||||||||| || ||||||||| ||||    
T  13664269 atccggtattccctagatacgtccttggaag 13664239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 55 - 185
Target Start/End: Complemental strand, 19572833 - 19572703
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| |||| ||||||  || || ||| |||| |||||||||||| || || ||||||||||||| |||||||||| ||||||| ||| || ||||| |    
T  19572833 gctttcgcactggtttccaacccaccaatggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcta 19572734  T
Q  155 acccggtattccccaggtacgtccttagaag 185  Q
    |||||||||||||| | ||||||||| ||||    
T  19572733 acccggtattccccggatacgtccttggaag 19572703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 77 - 174
Target Start/End: Complemental strand, 14152137 - 14152040
Alignment:
Q  77 catcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccaggtac 174  Q
    |||||| ||||||||| ||||||| || ||   |||| |||||||||||||||||  |||||| || |||||||||||||||||||||||||||||||    
T  14152137 catcaatggtggacgattaatccggctcatggatagaagcatgcacactggccaagcgttgttccctatgagaatcgaacccggtattccccaggtac 14152040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 53 - 185
Target Start/End: Complemental strand, 7866692 - 7866560
Alignment:
Q  53 ttgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatc 152  Q
    ||||||| |||| ||||||| || || ||||||||| |||||||||||  |  | ||||||||||||||||||||||||  |||||| | | |  |||||    
T  7866692 ttgctttcgcactggtttctaacccaccaaaggtgggcgactaatccggttcgtgcgtagaggcatgcacactggccaagcgttgttcctcctcggaatc 7866593  T
Q  153 gaacccggtattccccaggtacgtccttagaag 185  Q
    |||||||||||||| | ||||||||||| ||||    
T  7866592 gaacccggtattcctcgggtacgtccttggaag 7866560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 56 - 180
Target Start/End: Original strand, 14588616 - 14588740
Alignment:
Q  56 cttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaa 155  Q
    |||| ||||||||||  | |||| ||||||||||||||||||||| || || ||||||||||||| |||||| |||  ||| || | | ||| |||||||    
T  14588616 ctttcgcaccggttttcggctcaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggtcaagcgttattcctcctgaaaatcgaa 14588715  T
Q  156 cccggtattccccaggtacgtcctt 180  Q
    |||| |||||||||| |||||||||    
T  14588716 cccgatattccccagatacgtcctt 14588740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 55 - 166
Target Start/End: Complemental strand, 23383766 - 23383655
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| ||||| ||||| ||| || ||||||||||||||||||||  || || |||||||||| || ||||||||||  |||||| ||| || |||||||    
T  23383766 gctttcgcaccagtttccgacccaccaaaggtggacgactaatccagctcatgcgtagaggcaagcgcactggccaagcgttgttccccctgggaatcga 23383667  T
Q  155 acccggtattcc 166  Q
    ||||||||||||    
T  23383666 acccggtattcc 23383655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 53 - 180
Target Start/End: Original strand, 35812994 - 35813121
Alignment:
Q  53 ttgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatc 152  Q
    ||||||||| ||||||||  ||| | ||||||||||||||||||||||||| ||  |||||| ||||| |||||| |||   || |||||| |  |||||    
T  35812994 ttgcttttgtaccggttttcgacacttcaaaggtggacgactaatccgactcatgtgtagagacatgcgcactggtcaagcattatttcccctaggaatc 35813093  T
Q  153 gaacccggtattccccaggtacgtcctt 180  Q
    |||||||||||||| | |||||||||||    
T  35813094 gaacccggtattcctcgggtacgtcctt 35813121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 55 - 185
Target Start/End: Original strand, 41163458 - 41163587
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| ||||| ||||| ||| ||  |||||||||||||||||||  || || ||||||| ||||  ||||||||||| |||| ||||| || |||||||    
T  41163458 gctttcgcaccagtttccgacccacaaaaggtggacgactaatccagctcatgcgtagagacatgtgcactggccaaacgttg-ttcccctgggaatcga 41163556  T
Q  155 acccggtattccccaggtacgtccttagaag 185  Q
    |||||||||||||| ||||||| ||| ||||    
T  41163557 acccggtattccccgggtacgttcttggaag 41163587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 55 - 165
Target Start/End: Original strand, 18136274 - 18136388
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaat----ccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaa 150  Q
    ||||||||||||||||| ||| || ||| ||||||||||||||    ||| || ||  |||||||||||||||||| |||| ||||||| ||| || |||    
T  18136274 gcttttgcaccggtttccgacccaccaatggtggacgactaattaatccggctcatgtgtagaggcatgcacactgaccaagtgttgttccccctgggaa 18136373  T
Q  151 tcgaacccggtattc 165  Q
    |||||||||||||||    
T  18136374 tcgaacccggtattc 18136388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 80 - 157
Target Start/End: Original strand, 22655180 - 22655257
Alignment:
Q  80 caaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacc 157  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||  ||||  ||||||||| || ||||||||||    
T  22655180 caaaggtggacgactaatctgacttatgcgtagaggcatgcacactgatcaaacattgtttcccctgggaatcgaacc 22655257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 55 - 180
Target Start/End: Original strand, 23247350 - 23247474
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| ||||||||||  ||| |||||||||||||||||||||| | ||  | |||||||||||||| ||||  |||  |||||| | | || |||||||    
T  23247350 gctttcgcaccggttttcgac-catcaaaggtggacgactaatctggctcgtgcgtagaggcatgcatactgatcaagcgttgttcctcctgggaatcga 23247448  T
Q  155 acccggtattccccaggtacgtcctt 180  Q
    ||||| ||||||||||||||||||||    
T  23247449 acccgatattccccaggtacgtcctt 23247474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 108 - 185
Target Start/End: Complemental strand, 28857184 - 28857107
Alignment:
Q  108 cgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccaggtacgtccttagaag 185  Q
    ||||||||||||| |||||||||| ||||||| ||| || ||||||||||||||||||||| ||| ||||||| ||||    
T  28857184 cgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccgggtgcgtccttggaag 28857107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 55 - 139
Target Start/End: Original strand, 39099777 - 39099861
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtt 139  Q
    ||||||||||||||||| ||| || ||||||||| ||||||||||| || || ||||||||||||  |||||||||| |||||||    
T  39099777 gcttttgcaccggtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgtgcactggccaagtgttgtt 39099861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 61 - 177
Target Start/End: Original strand, 42291509 - 42291625
Alignment:
Q  61 gcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccgg 160  Q
    ||||||||||| ||  |||||||||||||||||||||||| ||  | ||||||||||||  ||||||||||  ||||||  || || ||||| |||||||    
T  42291509 gcaccggtttccgatccatcaaaggtggacgactaatccggctcgtgcgtagaggcatgtgcactggccaagcgttgttcaccctgggaatcaaacccgg 42291608  T
Q  161 tattccccaggtacgtc 177  Q
    ||||| || ||||||||    
T  42291609 tattctccgggtacgtc 42291625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 62 - 185
Target Start/End: Original strand, 11845806 - 11845929
Alignment:
Q  62 caccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggt 161  Q
    ||||||||||  || |||||||||||| ||| |||| || || |||||||||||||||| ||||||||||| |||||| ||| |   ||||||||||| |    
T  11845806 caccggtttccaacccatcaaaggtgggcgattaattcggctcatacgtagaggcatgcgcactggccaaacgttgttccccctcgaaatcgaacccgat 11845905  T
Q  162 attccccaggtacgtccttagaag 185  Q
    ||| | | ||||||||||| ||||    
T  11845906 atttctcgggtacgtccttggaag 11845929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 61 - 168
Target Start/End: Complemental strand, 20525941 - 20525834
Alignment:
Q  61 gcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccgg 160  Q
    ||||||||||| ||  || ||| ||||||||||||||||| || || ||||||||||||| ||||||| || ||||||| | | || ||||||||||||     
T  20525941 gcaccggtttccgatccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggcgaagtgttgttccacctgggaatcgaacccga 20525842  T
Q  161 tattcccc 168  Q
    ||||||||    
T  20525841 tattcccc 20525834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 90 - 185
Target Start/End: Complemental strand, 30995195 - 30995100
Alignment:
Q  90 cgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccaggtacgtccttagaag 185  Q
    ||||||||||| ||  | ||||||||||||| | |||||||| ||||||| ||| || |||||||||| ||||||||||| |||||||||| ||||    
T  30995195 cgactaatccggctcgtgcgtagaggcatgcgccctggccaagtgttgttccccctgggaatcgaacctggtattccccatgtacgtccttggaag 30995100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 55 - 164
Target Start/End: Complemental strand, 21375460 - 21375352
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| |||| |||||| ||  |||||||| |||||||||||||||||| || |||||| |||||| |||||| ||||||||| ||||| || || ||||    
T  21375460 gctttcgcactggtttccgatccatcaaagatggacgactaatccgactcatgcgtagaagcatgcgcactggtcaaatgttg-ttcccttgggagtcga 21375362  T
Q  155 acccggtatt 164  Q
    ||||| ||||    
T  21375361 acccgatatt 21375352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 55 - 168
Target Start/End: Original strand, 42861216 - 42861329
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| |||||||| || ||| || ||| ||||||||| ||||||| || || ||||||||||||| |||||||||| |||||||||||  |  ||| ||    
T  42861216 gctttcgcaccggtctccgacccaccaatggtggacgattaatccggctcatgcgtagaggcatgcgcactggccaagtgttgtttccctgggaaattga 42861315  T
Q  155 acccggtattcccc 168  Q
    ||||| ||||||||    
T  42861316 acccgatattcccc 42861329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 56 - 167
Target Start/End: Complemental strand, 2485304 - 2485194
Alignment:
Q  56 cttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaa 155  Q
    |||| ||| ||||||| ||| |||||||||||  |||||||||||||| |||||||||||||||| ||| |||| |  |||| ||||| |  ||||||||    
T  2485304 ctttcgcatcggtttccgacccatcaaaggtgagcgactaatccgactcatacgtagaggcatgcgcacaggcccagggttg-ttcccctaggaatcgaa 2485206  T
Q  156 cccggtattccc 167  Q
    ||| ||||||||    
T  2485205 cccagtattccc 2485194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 109 - 180
Target Start/End: Original strand, 4016307 - 4016378
Alignment:
Q  109 gtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccaggtacgtcctt 180  Q
    |||||||||||| |||||||||| ||||||| ||| ||| ||||||||||| |||| | |||||||||||||    
T  4016307 gtagaggcatgcgcactggccaagtgttgttccccctgataatcgaacccgatatttctcaggtacgtcctt 4016378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 184
Target Start/End: Original strand, 20682613 - 20682744
Alignment:
Q  53 ttgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatc 152  Q
    ||||||| |||||||||||  || ||  |||||||| ||| ||||||| ||  | ||||||||||||| ||||||||||  |||||| ||| ||  ||||    
T  20682613 ttgctttcgcaccggtttccaacccactaaaggtggtcgattaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccctggaaatc 20682712  T
Q  153 gaacccggtattccccaggtacgtccttagaa 184  Q
     |||||  |||||||| |||||||||||||||    
T  20682713 taacccaatattccccgggtacgtccttagaa 20682744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 62 - 177
Target Start/End: Complemental strand, 41801079 - 41800964
Alignment:
Q  62 caccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggt 161  Q
    ||||| |||| ||| |||||||| || |||||||||||| ||  | ||||||| ||||| || ||| |||  |||||| ||| ||||||||||||||| |    
T  41801079 caccgctttccgacccatcaaagatgaacgactaatccggctcgtgcgtagagacatgcgcattggtcaagcgttgttccccttgagaatcgaacccgat 41800980  T
Q  162 attccccaggtacgtc 177  Q
    ||||||||| ||||||    
T  41800979 attccccagatacgtc 41800964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 55 - 180
Target Start/End: Original strand, 3653912 - 3654035
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||||||||||||||  ||  || ||||||||||||||||||||| ||  | ||||||||||||| |||||| |||  ||||||  |  |  |||||||    
T  3653912 gcttttgcaccggttttcgatccaccaaaggtggacgactaatccgcctcgtgcgtagaggcatgcgcactggtcaagcgttgtt--ctctaggaatcga 3654009  T
Q  155 acccggtattccccaggtacgtcctt 180  Q
    ||||||||||| || |||||||||||    
T  3654010 acccggtattctccgggtacgtcctt 3654035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 63 - 180
Target Start/End: Original strand, 7308370 - 7308487
Alignment:
Q  63 accggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggta 162  Q
    |||||||| |||  |||||||||||  ||||||||||| || || ||||||||||||  ||||| ||||  |||||| ||| || |||||||||||| ||    
T  7308370 accggtttttgatccatcaaaggtgagcgactaatccggctcatgcgtagaggcatgtgcactgcccaagcgttgttccccctgggaatcgaacccgata 7308469  T
Q  163 ttccccaggtacgtcctt 180  Q
    |||| ||  |||||||||    
T  7308470 ttcctcaaatacgtcctt 7308487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 185
Target Start/End: Complemental strand, 20693041 - 20692912
Alignment:
Q  56 cttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaa 155  Q
    |||| ||||||||||| ||| || ||||||||||| ||||||| || | || |  |||||||||   |||||||||  |||||||||  |  ||||| ||    
T  20693041 ctttcgcaccggtttccgacccaccaaaggtggacaactaatctgaatcatgcacagaggcatgtgtactggccaagcgttgtttcctctaggaatcaaa 20692942  T
Q  156 cccggtattccccaggtacgtccttagaag 185  Q
    ||||||||||||| ||||||||||| ||||    
T  20692941 cccggtattccccgggtacgtccttggaag 20692912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 180
Target Start/End: Original strand, 38897717 - 38897841
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| |||| |||||| ||  || ||||||||| | ||||||||| ||  | ||||||||||||| ||||||||||  |||| ||||| ||  ||||||    
T  38897717 gctttcgcactggtttccgatccaccaaaggtgggcaactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttg-ttcccctggaaatcga 38897815  T
Q  155 acccggtattccccaggtacgtcctt 180  Q
    |||||||||||||||  |||||||||    
T  38897816 acccggtattccccatatacgtcctt 38897841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 115 - 185
Target Start/End: Complemental strand, 1899050 - 1898980
Alignment:
Q  115 gcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccaggtacgtccttagaag 185  Q
    |||||| ||||||||||  |||||| ||| || ||||||||||||||||||||| ||||| ||||| ||||    
T  1899050 gcatgcgcactggccaagcgttgttccccctgggaatcgaacccggtattccccgggtacatccttggaag 1898980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 53 - 131
Target Start/End: Original strand, 9168249 - 9168327
Alignment:
Q  53 ttgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaa 131  Q
    |||||||||||||| |||  ||| ||  |||||||||||||||||||| || || |||||||| |||| ||||||||||    
T  9168249 ttgcttttgcaccgattttcgacccactaaaggtggacgactaatccggctcatgcgtagaggtatgcgcactggccaa 9168327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 53 - 131
Target Start/End: Complemental strand, 14728194 - 14728116
Alignment:
Q  53 ttgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaa 131  Q
    ||||||| ||||||||||| ||| |||||||||||  | ||||||||| || || ||||||||||||| ||||| ||||    
T  14728194 ttgctttcgcaccggtttccgacccatcaaaggtgagcaactaatccggctcatgcgtagaggcatgcgcactgaccaa 14728116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 53 - 103
Target Start/End: Original strand, 38296726 - 38296776
Alignment:
Q  53 ttgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgact 103  Q
    ||||||||||| ||||||| ||| |||||||||||| ||||||||||||||    
T  38296726 ttgcttttgcatcggtttccgacccatcaaaggtgggcgactaatccgact 38296776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 121
Target Start/End: Original strand, 14235710 - 14235778
Alignment:
Q  53 ttgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgca 121  Q
    ||||||||||| ||||||||||| || |||||||||  ||||||||||||| || | ||||| ||||||    
T  14235710 ttgcttttgcatcggtttctgacccaccaaaggtgggtgactaatccgactcatgcttagagtcatgca 14235778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 90 - 177
Target Start/End: Complemental strand, 22295290 - 22295203
Alignment:
Q  90 cgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccaggtacgtc 177  Q
    |||||||||| ||| || ||||||||||||| |||||||||| | || || ||| | |||||| |||||| |||| | ||||||||||    
T  22295290 cgactaatccaactcatgcgtagaggcatgcgcactggccaagtattattccccctcagaatcaaacccgatatttctcaggtacgtc 22295203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 53 - 168
Target Start/End: Complemental strand, 40117526 - 40117411
Alignment:
Q  53 ttgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatc 152  Q
    ||||||| ||||||||||  ||  || |||||||| |||| ||||||| || || ||||||||||||| ||||||||||  |||||| ||| ||  ||||    
T  40117526 ttgctttcgcaccggttttcgatccaccaaaggtgaacgattaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttccccctggaaatc 40117427  T
Q  153 gaacccggtattcccc 168  Q
    |||  || ||||||||    
T  40117426 gaattcgatattcccc 40117411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 185
Target Start/End: Complemental strand, 30349688 - 30349558
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| ||||||||||| | | || | |||||||||||||||| |  || || | ||||||||||| ||||||||||   ||||| ||| |   |||| |    
T  30349688 gctttcgcaccggtttccggcccacctaaggtggacgactaattcagctcatgcatagaggcatgcgcactggccaatcattgttccccctagaaatcaa 30349589  T
Q  155 acccggtattccccaggtacgtccttagaag 185  Q
    |||||||||||||| | ||||||||| ||||    
T  30349588 acccggtattccccggatacgtccttggaag 30349558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 131
Target Start/End: Complemental strand, 43399239 - 43399161
Alignment:
Q  53 ttgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaa 131  Q
    ||||||| ||||||||||| |||  | |||| |||||||||||||||  ||  | ||||||||||||| ||||||||||    
T  43399239 ttgctttcgcaccggtttccgaccaaccaaatgtggacgactaatcctgctcgtgcgtagaggcatgcgcactggccaa 43399161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 148 - 185
Target Start/End: Original strand, 6767142 - 6767179
Alignment:
Q  148 gaatcgaacccggtattccccaggtacgtccttagaag 185  Q
    ||||||||||||||||||||| ||||||||||| ||||    
T  6767142 gaatcgaacccggtattccccgggtacgtccttggaag 6767179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 86 - 139
Target Start/End: Complemental strand, 7616998 - 7616945
Alignment:
Q  86 tggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtt 139  Q
    ||||||||||||| |||| || |||||||||||||| ||||| |||| ||||||    
T  7616998 tggacgactaatctgactcatgcgtagaggcatgcatactggtcaaacgttgtt 7616945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 157
Target Start/End: Original strand, 24463885 - 24463986
Alignment:
Q  56 cttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaa 155  Q
    |||||||||||||||  ||| ||  |||||||| ||||||||||| ||  | | ||||||||||| ||||||||||  ||||||  || ||| |||||||    
T  24463885 cttttgcaccggttttcgacccagtaaaggtgggcgactaatccggctcgtgcatagaggcatgcgcactggccaatcgttgttcgccttgaaaatcgaa 24463984  T
Q  156 cc 157  Q
    ||    
T  24463985 cc 24463986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 68 - 157
Target Start/End: Complemental strand, 24875441 - 24875352
Alignment:
Q  68 tttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacc 157  Q
    |||| ||| |||||||||||||||| ||||||| ||  | ||||||| ||||| |||||| |||| ||||||  || | |||||||||||    
T  24875441 tttccgacccatcaaaggtggacgattaatccggctcgtgcgtagagacatgcgcactggtcaaacgttgttctccctaagaatcgaacc 24875352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 116 - 185
Target Start/End: Original strand, 25950641 - 25950710
Alignment:
Q  116 catgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccaggtacgtccttagaag 185  Q
    ||||| |||||||||| ||||||||||| ||| |||| |||| | ||||||||  |||||||||| ||||    
T  25950641 catgcgcactggccaagtgttgtttcccttgaaaatcaaacctgatattccccgagtacgtcctttgaag 25950710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 108 - 185
Target Start/End: Original strand, 35403563 - 35403640
Alignment:
Q  108 cgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccaggtacgtccttagaag 185  Q
    ||||||| ||||| || |||||||  |||||| ||| | |||||||||||||||||| |||  |||||||||| ||||    
T  35403563 cgtagagacatgcgcattggccaagcgttgttcccccttagaatcgaacccggtatttcccgagtacgtccttggaag 35403640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 108 - 185
Target Start/End: Original strand, 38297015 - 38297092
Alignment:
Q  108 cgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccaggtacgtccttagaag 185  Q
    |||||| | |||| ||||| ||||| |||||| ||| || |||| |||||||||||||| || |||| ||||||||||    
T  38297015 cgtagaagaatgcgcactgaccaaacgttgttccccttgggaattgaacccggtattcctcaagtacatccttagaag 38297092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 116 - 165
Target Start/End: Complemental strand, 40060344 - 40060295
Alignment:
Q  116 catgcacactggccaaatgttgtttcccatgagaatcgaacccggtattc 165  Q
    ||||| |||||||||| ||||||| ||| ||| |||||||||||||||||    
T  40060344 catgcgcactggccaagtgttgttccccctgaaaatcgaacccggtattc 40060295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 55 - 120
Target Start/End: Complemental strand, 40773382 - 40773317
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgc 120  Q
    ||||| ||||||||||| ||| || ||||| || |||||||||||||||  || ||||||||||||    
T  40773382 gctttcgcaccggtttccgacgcaccaaagatgaacgactaatccgactcgtatgtagaggcatgc 40773317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 184
Target Start/End: Complemental strand, 7736947 - 7736851
Alignment:
Q  88 gacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccaggtacgtccttagaa 184  Q
    |||| |||||| ||||| || ||||||  |||  ||||| ||||| |||||||  | |||||||||||| || |||||| | |||||||||||||||    
T  7736947 gacggctaatctgacttgtaagtagagatatgtgcactgaccaaacgttgtttgtcctgagaatcgaactcgatattcctcgggtacgtccttagaa 7736851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 80 - 120
Target Start/End: Original strand, 27648448 - 27648488
Alignment:
Q  80 caaaggtggacgactaatccgacttatacgtagaggcatgc 120  Q
    ||||| ||||||||||||||| || ||||||||||||||||    
T  27648448 caaagatggacgactaatccggctcatacgtagaggcatgc 27648488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 56 - 185
Target Start/End: Complemental strand, 26293 - 26164
Alignment:
Q  56 cttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaa 155  Q
    |||| |||| |||||| ||||||||||  |||||||||||||||| ||  | ||||||||||||||||||||||||  |||||| ||| ||  |||||||    
T  26293 ctttcgcactggtttccgactcatcaattgtggacgactaatccggctcgtgcgtagaggcatgcacactggccaagcgttgttccccctggaaatcgaa 26194  T
Q  156 cccggtattccccaggtacgtccttagaag 185  Q
    ||| |||||||||||||| |||||||||||    
T  26193 cccagtattccccaggtatgtccttagaag 26164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 62; Significance: 7e-27; HSPs: 64)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 55 - 180
Target Start/End: Original strand, 34346285 - 34346410
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| ||||||||||| ||| || ||||||||  ||| ||||| |||| || |||||||||||||||||||||||| ||||||| ||| ||| |||| |    
T  34346285 gctttcgcaccggtttccgacccaccaaaggtgagcgattaatctgactcatgcgtagaggcatgcacactggccaagtgttgttccccctgataatcaa 34346384  T
Q  155 acccggtattccccaggtacgtcctt 180  Q
    |||| |||||||||||||||||||||    
T  34346385 acccagtattccccaggtacgtcctt 34346410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 56 - 180
Target Start/End: Original strand, 39806884 - 39807008
Alignment:
Q  56 cttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaa 155  Q
    |||| |||||||||| |||  || |||||||||| |||||||||||||  |  |||||||||||| ||||||||||| |||||||| | || ||||||||    
T  39806884 ctttcgcaccggtttatgaaccaccaaaggtggatgactaatccgactcgtgtgtagaggcatgcgcactggccaaacgttgtttctcttgggaatcgaa 39806983  T
Q  156 cccggtattccccaggtacgtcctt 180  Q
    ||||||||||||| |||||||||||    
T  39806984 cccggtattccccgggtacgtcctt 39807008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 53 - 180
Target Start/End: Original strand, 25540400 - 25540527
Alignment:
Q  53 ttgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatc 152  Q
    ||||||| ||||||||||| ||| || ||||||||||||||||||||| ||  | ||||||||||||| ||||||||||  |||||| ||| |  |||||    
T  25540400 ttgctttcgcaccggtttccgacccaccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccctaggaatc 25540499  T
Q  153 gaacccggtattccccaggtacgtcctt 180  Q
    |||||| ||||||||||| |||||||||    
T  25540500 gaacccagtattccccagatacgtcctt 25540527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 55 - 185
Target Start/End: Complemental strand, 7747382 - 7747252
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| ||||||||||| ||| ||  ||||||| |||||||||||| || || ||||||||||||||||||||||||| |||||| | | |  |||||||    
T  7747382 gctttcgcaccggtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcacactggccaaacgttgttcctcctaggaatcga 7747283  T
Q  155 acccggtattccccaggtacgtccttagaag 185  Q
    |||||||||||||| | ||||||||| ||||    
T  7747282 acccggtattccccggatacgtccttggaag 7747252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 80 - 180
Target Start/End: Complemental strand, 331584 - 331484
Alignment:
Q  80 caaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccaggtacgtcct 179  Q
    ||||||||| ||||||||||| || || |||||| |||||| |||||||||| ||||||| ||| || ||||||||||||||||||||| ||||||||||    
T  331584 caaaggtgggcgactaatccggctcatgcgtagaagcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccgggtacgtcct 331485  T
Q  180 t 180  Q
    |    
T  331484 t 331484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 56 - 180
Target Start/End: Original strand, 19976806 - 19976930
Alignment:
Q  56 cttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaa 155  Q
    |||| |||||| |||| || ||||||||||||| |||||||| |||||||| ||||||| ||||| ||||| ||||| ||| || ||| ||| |||||||    
T  19976806 ctttcgcaccgatttccgattcatcaaaggtgggcgactaattcgacttatgcgtagagacatgcgcactgaccaaacgttattccccctgaaaatcgaa 19976905  T
Q  156 cccggtattccccaggtacgtcctt 180  Q
    ||||||||||||| | |||||||||    
T  19976906 cccggtattccccggatacgtcctt 19976930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 56 - 180
Target Start/End: Complemental strand, 38962870 - 38962746
Alignment:
Q  56 cttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaa 155  Q
    |||| ||||| ||||||||| || |||||||||||||||||||||  | || ||||||||||||| ||||||||||  |||||| | | ||| |||||||    
T  38962870 ctttcgcaccagtttctgacccaccaaaggtggacgactaatccggttcatgcgtagaggcatgcgcactggccaagcgttgttcctcctgaaaatcgaa 38962771  T
Q  156 cccggtattccccaggtacgtcctt 180  Q
    ||||||||||||| | |||||||||    
T  38962770 cccggtattccccggatacgtcctt 38962746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 57 - 185
Target Start/End: Original strand, 39201508 - 39201636
Alignment:
Q  57 ttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaac 156  Q
    |||| |||||||||| ||| || |||||||| |||||||||||| || || |||||||||||||||||||||||||  ||||| ||| |||||||||||     
T  39201508 tttttcaccggtttccgacccaccaaaggtgaacgactaatccggctcatgcgtagaggcatgcacactggccaaacattgttccccctgagaatcgaat 39201607  T
Q  157 ccggtattccccaggtacgtccttagaag 185  Q
     ||||||||| |  |||||||||| ||||    
T  39201608 tcggtattcctcgagtacgtccttggaag 39201636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 61 - 180
Target Start/End: Complemental strand, 2785034 - 2784916
Alignment:
Q  61 gcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccgg 160  Q
    ||||||||||| |||||||||| | ||||||||||||| |||| || ||||||||||||| ||||| |||||| ||||||||| ||| |||||||| |||    
T  2785034 gcaccggtttccgactcatcaatgatggacgactaatctgactcatgcgtagaggcatgcgcactgaccaaatcttgtttccc-tgaaaatcgaactcgg 2784936  T
Q  161 tattccccaggtacgtcctt 180  Q
    |||||| | | |||||||||    
T  2784935 tattcctcggatacgtcctt 2784916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 77 - 180
Target Start/End: Original strand, 3848934 - 3849037
Alignment:
Q  77 catcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccaggtacgt 176  Q
    ||||||||||| |||||||||||||||  | ||||||| ||||| | ||||||||| |||||||||| ||| ||||||||||||||||| |||| |||||    
T  3848934 catcaaaggtgaacgactaatccgactcgtgcgtagagacatgcgccctggccaaacgttgtttcccctgataatcgaacccggtattctccagatacgt 3849033  T
Q  177 cctt 180  Q
    ||||    
T  3849034 cctt 3849037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 62 - 185
Target Start/End: Complemental strand, 37560274 - 37560151
Alignment:
Q  62 caccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggt 161  Q
    |||||||||  ||| |||||||||||||||| ||||||| ||  | ||||||||||||| ||||| ||||| |||||| ||| ||||||||||||| |||    
T  37560274 caccggttttcgacccatcaaaggtggacgattaatccggctcgtgcgtagaggcatgcgcactgaccaaacgttgttccccttgagaatcgaacctggt 37560175  T
Q  162 attccccaggtacgtccttagaag 185  Q
    ||||| | ||||||||||| ||||    
T  37560174 attcctcgggtacgtccttggaag 37560151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 67 - 185
Target Start/End: Original strand, 10026626 - 10026744
Alignment:
Q  67 gtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattcc 166  Q
    ||||| ||| || ||||||||| ||||||||||| || || ||||||||||||| ||||||||||| |||||| ||| ||||||||||||||||||||      
T  10026626 gtttccgacccaccaaaggtggtcgactaatccggctcatgcgtagaggcatgcgcactggccaaacgttgttccccctgagaatcgaacccggtatttt 10026725  T
Q  167 ccaggtacgtccttagaag 185  Q
    ||  |||||||||| ||||    
T  10026726 ccgagtacgtccttggaag 10026744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 55 - 185
Target Start/End: Complemental strand, 41220743 - 41220613
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| ||||||||||| ||| ||  ||||||| ||||||||| || || || ||||||||||||| ||||||||||  |||||| | | || |||||||    
T  41220743 gctttcgcaccggtttccgacccactaaaggtgaacgactaattcggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctgggaatcga 41220644  T
Q  155 acccggtattccccaggtacgtccttagaag 185  Q
    |||||||||||||| ||||||||||| ||||    
T  41220643 acccggtattccccgggtacgtccttggaag 41220613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 53 - 156
Target Start/End: Complemental strand, 16325705 - 16325602
Alignment:
Q  53 ttgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatc 152  Q
    ||||||| ||||||||||| ||| || ||| ||||||||||||||| | || || |||||||||||||||||||||||| ||||||| ||| || |||||    
T  16325705 ttgctttcgcaccggtttccgacccaccaatggtggacgactaatctggctcatgcgtagaggcatgcacactggccaagtgttgttccccctgggaatc 16325606  T
Q  153 gaac 156  Q
    ||||    
T  16325605 gaac 16325602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 55 - 185
Target Start/End: Complemental strand, 8410239 - 8410109
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| ||||||||||| ||| |  |||| |||| ||||||||||| ||  | ||||||||||||| |||||||||| ||||||| ||| || |||||||    
T  8410239 gctttcgcaccggtttccgaccccccaaaagtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcga 8410140  T
Q  155 acccggtattccccaggtacgtccttagaag 185  Q
    ||||| ||||| || ||||||||||| ||||    
T  8410139 acccgatattctccgggtacgtccttggaag 8410109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 55 - 185
Target Start/End: Complemental strand, 10823168 - 10823038
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| ||||||||||| ||| ||  |||||||| ||||||||||| ||  | ||||||||||||| ||||||||||  |||||| | | || ||||| |    
T  10823168 gctttcgcaccggtttccgacccacaaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttcctcctgggaatcaa 10823069  T
Q  155 acccggtattccccaggtacgtccttagaag 185  Q
    |||||||||||||| ||||||||||| ||||    
T  10823068 acccggtattccccgggtacgtccttggaag 10823038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 55 - 185
Target Start/End: Original strand, 15234059 - 15234189
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| ||| ||||||| |||  ||||||| || ||||||||||  |||| | ||||||||||||| |||||| ||| ||||||| ||| ||||||||||    
T  15234059 gctttcgcatcggtttccgacctatcaaagatgaacgactaatctaacttgtgcgtagaggcatgcgcactggtcaagtgttgttccccctgagaatcga 15234158  T
Q  155 acccggtattccccaggtacgtccttagaag 185  Q
    |||  ||||||||| ||||||||||| ||||    
T  15234159 acctagtattccccgggtacgtccttggaag 15234189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 55 - 185
Target Start/End: Complemental strand, 22593241 - 22593113
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| ||||||||| | ||| || ||||||||||||||||||||| || || ||||||||||||| |||||||| || |||||| ||| || |||||||    
T  22593241 gctttcgcaccggttcc-gacccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggcc-aacgttgttccccctgggaatcga 22593144  T
Q  155 acccggtattccccaggtacgtccttagaag 185  Q
    || | ||||||||| ||||||||||| ||||    
T  22593143 actcagtattccccgggtacgtccttggaag 22593113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 55 - 185
Target Start/End: Complemental strand, 38005510 - 38005380
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| ||||| ||||| ||  || ||||||||| ||||||||||| || ||  |||||||||||| ||||||||||  |||||| ||| || |||||||    
T  38005510 gctttcgcaccagtttccgatccaccaaaggtgggcgactaatccggctcatgtgtagaggcatgcgcactggccaagcgttgttccccttgggaatcga 38005411  T
Q  155 acccggtattccccaggtacgtccttagaag 185  Q
    |||| ||||||||| ||||||||||| ||||    
T  38005410 acccagtattccccgggtacgtccttggaag 38005380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 55 - 185
Target Start/End: Original strand, 41031904 - 41032033
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| |||| |||||| ||| || |||||||||  |||||||||| ||  | |||||||||||||||||||||||| ||||||| ||| || |||||||    
T  41031904 gctttcgcactggtttccgacccaccaaaggtgggtgactaatccggctcgtgcgtagaggcatgcacactggccaagtgttgttccccctgggaatcga 41032003  T
Q  155 acccggtattccccaggtacgtccttagaag 185  Q
    ||||||| || ||| ||||||||||| ||||    
T  41032004 acccggtgtt-ccctggtacgtccttggaag 41032033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 56 - 185
Target Start/End: Complemental strand, 16035044 - 16034915
Alignment:
Q  56 cttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaa 155  Q
    |||| ||||||||||| |||||||||| ||||  ||||||||||| ||  |||||| ||||||||||||||| |||  |||||| | | ||| |||||||    
T  16035044 ctttcgcaccggtttccgactcatcaatggtgagcgactaatccggctcgtacgtataggcatgcacactggtcaagcgttgttccgcctgaaaatcgaa 16034945  T
Q  156 cccggtattccccaggtacgtccttagaag 185  Q
    ||||||||||| | | ||||||||| ||||    
T  16034944 cccggtattcctcggatacgtccttggaag 16034915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 62 - 180
Target Start/End: Original strand, 6358156 - 6358274
Alignment:
Q  62 caccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggt 161  Q
    |||||||||  ||| || ||| ||||||||||||||||| || || ||||||||||||| |||||||||| ||||||| ||| ||  ||||||| | |||    
T  6358156 caccggttttcgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctggaaatcgaatctggt 6358255  T
Q  162 attccccaggtacgtcctt 180  Q
    ||||||| | |||||||||    
T  6358256 attccccggatacgtcctt 6358274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 67 - 165
Target Start/End: Original strand, 10046487 - 10046584
Alignment:
Q  67 gtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattc 165  Q
    ||||| ||| || ||||||||| ||||||||||| || || ||||||||||||| ||||| | ||| |||||||||| |||||||||||||||||||||    
T  10046487 gtttccgacccaccaaaggtggtcgactaatccggctcatgcgtagaggcatgcgcactgtc-aaacgttgtttcccttgagaatcgaacccggtattc 10046584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 55 - 157
Target Start/End: Complemental strand, 24179676 - 24179575
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    |||||||||||||||| | || || ||||| ||||||||||||||| || || ||||||||||||  ||||||||||| |||| ||||| ||||||||||    
T  24179676 gcttttgcaccggtttttaacccaccaaagatggacgactaatccggctcatgcgtagaggcatgtgcactggccaaacgttg-ttcccctgagaatcga 24179578  T
Q  155 acc 157  Q
    |||    
T  24179577 acc 24179575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 55 - 169
Target Start/End: Complemental strand, 25549836 - 25549722
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    |||||||||||| |||  ||  |||||||| ||||||||||||||| ||  | ||||||||||||  |||| |||||||||||||| || | ||||||||    
T  25549836 gcttttgcaccgatttacgatccatcaaagatggacgactaatccggctcgtgcgtagaggcatgtgcactagccaaatgttgttttccctaagaatcga 25549737  T
Q  155 acccggtattcccca 169  Q
    |||| ||||||||||    
T  25549736 acccagtattcccca 25549722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 61 - 168
Target Start/End: Original strand, 20612538 - 20612647
Alignment:
Q  61 gcaccggtttctgactcatcaaaggtggacgactaatcc-gacttatacgtagaggcatgcacactggccaaatgttgtttcc-catgagaatcgaaccc 158  Q
    ||||||||||| ||| || ||| |||||||||||||||| | || || | ||||||||||| |||||||||| ||||||| || | ||||||||||||||    
T  20612538 gcaccggtttccgacccaccaatggtggacgactaatcccggctcatgcatagaggcatgcgcactggccaagtgttgttccctcctgagaatcgaaccc 20612637  T
Q  159 ggtattcccc 168  Q
    ||||||||||    
T  20612638 ggtattcccc 20612647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 67 - 180
Target Start/End: Complemental strand, 34356302 - 34356189
Alignment:
Q  67 gtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattcc 166  Q
    ||||| ||| |||||| |||| |||| ||||||| || || | ||||||||||| ||||| |||| ||||||| ||| ||  ||||||||||||||||||    
T  34356302 gtttccgacccatcaatggtgcacgattaatccggctcatgcatagaggcatgcgcactgaccaagtgttgttccccctggaaatcgaacccggtattcc 34356203  T
Q  167 ccaggtacgtcctt 180  Q
    |||| |||||||||    
T  34356202 ccagatacgtcctt 34356189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 53 - 170
Target Start/End: Complemental strand, 44139594 - 44139477
Alignment:
Q  53 ttgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatc 152  Q
    ||||||| ||||||||||| ||| || ||  ||||| ||||||||||| ||  | |||||||||| || ||||||||||  |||||| ||| || |||||    
T  44139594 ttgctttcgcaccggtttccgacccaccattggtgggcgactaatccggctcgtgcgtagaggcacgcgcactggccaagcgttgttccccctgggaatc 44139495  T
Q  153 gaacccggtattccccag 170  Q
    ||||||||||||||||||    
T  44139494 gaacccggtattccccag 44139477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 61 - 185
Target Start/End: Complemental strand, 10669694 - 10669570
Alignment:
Q  61 gcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccgg 160  Q
    ||||||||||| ||| || |||||||| |||| ||||||||||  | ||||||| ||||| ||||||||||  ||||||  || || ||||| |||||||    
T  10669694 gcaccggtttccgacccaccaaaggtgaacgattaatccgactcgtgcgtagagacatgcgcactggccaagcgttgttctccctgggaatcaaacccgg 10669595  T
Q  161 tattccccaggtacgtccttagaag 185  Q
    ||  |||||||||||||||| ||||    
T  10669594 tagcccccaggtacgtccttggaag 10669570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 56 - 168
Target Start/End: Original strand, 14169608 - 14169720
Alignment:
Q  56 cttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaa 155  Q
    |||| ||||||||||| ||| || ||| ||| ||||||||||||| || || ||||||| ||||| |||||| ||| ||||||| |||  ||||||||||    
T  14169608 ctttcgcaccggtttccgacccaccaatggtagacgactaatccggctcatgcgtagagacatgcgcactggtcaagtgttgttcccccggagaatcgaa 14169707  T
Q  156 cccggtattcccc 168  Q
    |||| ||||||||    
T  14169708 cccgatattcccc 14169720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 53 - 185
Target Start/End: Original strand, 18902526 - 18902658
Alignment:
Q  53 ttgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatc 152  Q
    ||||||| ||||||||||| ||| || ||||||||| ||||||||| | ||  | ||||||| || || |||||| |||  |||||| ||| || |||||    
T  18902526 ttgctttcgcaccggtttccgacccaccaaaggtgggcgactaatctggctcgtgcgtagagacacgcgcactggtcaagcgttgttccccgtgggaatc 18902625  T
Q  153 gaacccggtattccccaggtacgtccttagaag 185  Q
    ||||||||||||||||  |||||||||| ||||    
T  18902626 gaacccggtattccccgagtacgtccttggaag 18902658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 56 - 184
Target Start/End: Complemental strand, 35946845 - 35946718
Alignment:
Q  56 cttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaa 155  Q
    |||| ||||| ||||| ||| || ||| ||||||||||||||||| ||  | |||||||||||||||| |||||||  |||| ||||| |  ||||||||    
T  35946845 ctttcgcaccagtttccgacccaccaatggtggacgactaatccggctcgtgcgtagaggcatgcacaatggccaagcgttg-ttcccctaggaatcgaa 35946747  T
Q  156 cccggtattccccaggtacgtccttagaa 184  Q
    | ||||||||||| | |||||||||||||    
T  35946746 ctcggtattccccggatacgtccttagaa 35946718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 53 - 185
Target Start/End: Original strand, 42770647 - 42770779
Alignment:
Q  53 ttgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatc 152  Q
    ||||||||||| ||||||  ||| || ||||||||||||| ||||||| ||  | || |||||||||| ||||||||||  |||||| ||| |||||||     
T  42770647 ttgcttttgcatcggttttcgacccaccaaaggtggacgattaatccggctcgtgcgaagaggcatgcgcactggccaagcgttgttccccctgagaatt 42770746  T
Q  153 gaacccggtattccccaggtacgtccttagaag 185  Q
    |||||||||||| | | | ||||||||| ||||    
T  42770747 gaacccggtatttctcggatacgtccttggaag 42770779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 53 - 180
Target Start/End: Complemental strand, 11069988 - 11069861
Alignment:
Q  53 ttgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatc 152  Q
    ||||||| ||| ||||||| ||| || ||| |||||||||||||| |  ||  | |||||||| |||| ||||||||||| |||||| ||| |  |||||    
T  11069988 ttgctttcgcatcggtttccgacccaccaacggtggacgactaattcagctcgtgcgtagaggtatgcgcactggccaaacgttgttccccctcggaatc 11069889  T
Q  153 gaacccggtattccccaggtacgtcctt 180  Q
    ||||| |||||||||| |||||||||||    
T  11069888 gaacctggtattccccgggtacgtcctt 11069861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 53 - 180
Target Start/End: Complemental strand, 29422325 - 29422198
Alignment:
Q  53 ttgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatc 152  Q
    ||||||| |||||| |||| ||  |||||||||||||||||||||||| ||  | |||| ||| |||| || ||||||| ||||||| ||  ||  ||||    
T  29422325 ttgctttcgcaccgatttccgatccatcaaaggtggacgactaatccggctcgtgcgtaaaggtatgctcattggccaagtgttgttccctctggaaatc 29422226  T
Q  153 gaacccggtattccccaggtacgtcctt 180  Q
    |||||| ||||||||| |||||||||||    
T  29422225 gaacccagtattccccgggtacgtcctt 29422198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 185
Target Start/End: Original strand, 2528339 - 2528469
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| ||||| ||||| ||||||  |||| ||  ||||||||||| |||||  |||||||||||||||||| ||||  |||||| ||| || |||||||    
T  2528339 gctttcgcaccagtttccgactcactaaagatgagcgactaatccggcttatgtgtagaggcatgcacactgaccaagcgttgttccccctgggaatcga 2528438  T
Q  155 acccggtattccccaggtacgtccttagaag 185  Q
    ||||||| |||| |  |||||||||| ||||    
T  2528439 acccggtgttcctcgagtacgtccttggaag 2528469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 185
Target Start/End: Original strand, 3811689 - 3811819
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| ||| ||||||||||| || ||||||||| ||| ||||||| || || ||||||||||||| || || |||| ||||||| ||  || |||||||    
T  3811689 gctttcgcatcggtttctgacccaccaaaggtgggcgagtaatccggctcatgcgtagaggcatgcgcattgaccaagtgttgttccctctgggaatcga 3811788  T
Q  155 acccggtattccccaggtacgtccttagaag 185  Q
    ||||| |||||| |  |||||||||| ||||    
T  3811789 acccgatattcctcgagtacgtccttggaag 3811819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 57 - 179
Target Start/End: Complemental strand, 7787162 - 7787040
Alignment:
Q  57 ttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaac 156  Q
    ||||||||||||||  ||  || ||||| ||| ||||||||||| ||  | |||||||||||||  ||||||||| | ||||| ||| ||  ||||||||    
T  7787162 ttttgcaccggttttcgatccaccaaagatgggcgactaatccggctcgtgcgtagaggcatgcgtactggccaagtattgttccccctggaaatcgaac 7787063  T
Q  157 ccggtattccccaggtacgtcct 179  Q
    |||||||||||| ||||||||||    
T  7787062 ccggtattccccgggtacgtcct 7787040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 173
Target Start/End: Complemental strand, 12455418 - 12455300
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| ||||||||||| ||| || ||| ||||  ||||||||||| ||  | ||||||||||||| ||||||| ||  |||||||||| ||  ||||||    
T  12455418 gctttcgcaccggtttccgacccaccaatggtgagcgactaatccggctcgtgcgtagaggcatgcgcactggctaagcgttgtttcccctggaaatcga 12455319  T
Q  155 acccggtattccccaggta 173  Q
    |||||||||||||| ||||    
T  12455318 acccggtattccccgggta 12455300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 90 - 167
Target Start/End: Original strand, 18649059 - 18649136
Alignment:
Q  90 cgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccc 167  Q
    |||||||||||||| || ||||||||||||| ||||| |||||| ||||| | | ||||||||||| |||||||||||    
T  18649059 cgactaatccgactcatgcgtagaggcatgcgcactgcccaaatattgttcctcctgagaatcgaatccggtattccc 18649136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 180
Target Start/End: Original strand, 9360747 - 9360871
Alignment:
Q  56 cttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaa 155  Q
    |||| ||||||||||| | | ||  |||||||| |||||||| || ||  | ||||||||||||| ||||||||||| |||||||||  |   |||||||    
T  9360747 ctttcgcaccggtttccggcccactaaaggtgggcgactaattcggctcgtgcgtagaggcatgcgcactggccaaacgttgtttcctctagtaatcgaa 9360846  T
Q  156 cccggtattccccaggtacgtcctt 180  Q
    || |||||||||| |||||||||||    
T  9360847 cctggtattccccgggtacgtcctt 9360871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 168
Target Start/End: Complemental strand, 12864331 - 12864219
Alignment:
Q  56 cttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaa 155  Q
    |||| ||||||||||| ||| || ||| ||||||||||||||| | || || || |||||||||| ||||| |||| ||||||| ||| ||  |||||||    
T  12864331 ctttcgcaccggtttccgacccaccaatggtggacgactaatctggctcatgcgcagaggcatgcgcactgaccaagtgttgttccccctggaaatcgaa 12864232  T
Q  156 cccggtattcccc 168  Q
     ||||||||||||    
T  12864231 tccggtattcccc 12864219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 180
Target Start/End: Original strand, 3643883 - 3644010
Alignment:
Q  53 ttgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatc 152  Q
    ||||||| ||| ||||||| | | || ||||||||||||||||||||  || || ||||||||||||| ||||||||||  |||||| | | |   ||||    
T  3643883 ttgctttcgcaacggtttccggcccaccaaaggtggacgactaatccagctcatgcgtagaggcatgcgcactggccaagcgttgttcctcgtagaaatc 3643982  T
Q  153 gaacccggtattccccaggtacgtcctt 180  Q
     ||||||||||||||| | |||||||||    
T  3643983 aaacccggtattccccggatacgtcctt 3644010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 55 - 130
Target Start/End: Original strand, 20116610 - 20116685
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggcca 130  Q
    ||||| ||||||||||| ||| ||||||||||||||| |||||||| || || ||||||||||||| || ||||||    
T  20116610 gctttcgcaccggtttccgacccatcaaaggtggacggctaatccggctcatgcgtagaggcatgcgcattggcca 20116685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 55 - 185
Target Start/End: Original strand, 13026409 - 13026539
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||||||| |||||||||||  | |||| ||||  |||||||||| || || ||||||||||||| ||||||||||   ||||| | | ||| ||||||    
T  13026409 gcttttgcatcggtttctgacctaccaaaagtggctgactaatccggctcatgcgtagaggcatgcgcactggccaatcattgttcctcctgataatcga 13026508  T
Q  155 acccggtattccccaggtacgtccttagaag 185  Q
    ||||| |||||||  | ||||||||| ||||    
T  13026509 acccgatattccctggatacgtccttggaag 13026539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 79 - 185
Target Start/End: Complemental strand, 41187793 - 41187687
Alignment:
Q  79 tcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccaggtacgtcc 178  Q
    ||||| |||| ||||||||  | || || |||||||||||| ||||||| ||| ||||||| ||| | | |||||||||||||||||  ||| |||||||    
T  41187793 tcaaacgtgggcgactaatatgtctcatgcgtagaggcatggacactggtcaagtgttgttccccctcataatcgaacccggtattcttcagatacgtcc 41187694  T
Q  179 ttagaag 185  Q
    |||||||    
T  41187693 ttagaag 41187687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 170
Target Start/End: Complemental strand, 20533228 - 20533111
Alignment:
Q  53 ttgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatc 152  Q
    ||||||| | ||| ||||||||| ||| |||| ||  ||| ||||||||||  ||||||||||||||| || | |||||| |||||||  | ||||||||    
T  20533228 ttgctttcgtacctgtttctgacacattaaagatgagcgattaatccgactcgtacgtagaggcatgcgcattagccaaacgttgtttttcgtgagaatc 20533129  T
Q  153 gaacccggtattccccag 170  Q
     |||||| ||||||||||    
T  20533128 aaacccgatattccccag 20533111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 185
Target Start/End: Complemental strand, 21286499 - 21286422
Alignment:
Q  108 cgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccaggtacgtccttagaag 185  Q
    ||||||||||||| |||||| |||  |||||||| | || ||||||||||||||||||||| | ||||||||| ||||    
T  21286499 cgtagaggcatgcgcactggtcaagcgttgtttcgcctgggaatcgaacccggtattccccggatacgtccttggaag 21286422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 62 - 143
Target Start/End: Original strand, 28525460 - 28525541
Alignment:
Q  62 caccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttccc 143  Q
    |||| ||||| ||| ||| ||||||||| |||||||||| ||  | ||||||||||||| |||||||||| |||||||||||    
T  28525460 caccagtttccgacccattaaaggtggatgactaatccggctcgtgcgtagaggcatgcgcactggccaagtgttgtttccc 28525541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 166
Target Start/End: Original strand, 28616375 - 28616488
Alignment:
Q  53 ttgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatc 152  Q
    ||||||| ||||||||||||||| ||  |||| ||| ||||||||| | ||  | ||||||||||||| ||||| |||| |||| || ||| ||| ||||    
T  28616375 ttgctttcgcaccggtttctgacccactaaagatgggcgactaatctggctcgtgcgtagaggcatgcgcactgcccaagtgttattccccctgaaaatc 28616474  T
Q  153 gaacccggtattcc 166  Q
    ||||||| ||||||    
T  28616475 gaacccgatattcc 28616488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 157
Target Start/End: Complemental strand, 44773370 - 44773270
Alignment:
Q  56 cttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaa 155  Q
    |||| ||||||||||| ||| |||||||||||  ||||||||||| || |  |  |||||||||||||||||||||| ||||||| || | |||||||||    
T  44773370 ctttcgcaccggtttccgacccatcaaaggtgagcgactaatccggctcacgcacagaggcatgcacactggccaaacgttgttttccct-agaatcgaa 44773272  T
Q  156 cc 157  Q
    ||    
T  44773271 cc 44773270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 80 - 180
Target Start/End: Complemental strand, 2550951 - 2550851
Alignment:
Q  80 caaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccaggtacgtcct 179  Q
    |||| |||| ||||||||||| || || ||||||| ||||| ||||||| || ||||||| | | || |||||||||||| |||||||| | ||||||||    
T  2550951 caaaagtgggcgactaatccggctcatgcgtagagacatgcgcactggctaagtgttgttcctcctgggaatcgaacccgatattccccggatacgtcct 2550852  T
Q  180 t 180  Q
    |    
T  2550851 t 2550851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 25552905 - 25552941
Alignment:
Q  1 atcaaagtacacgatctctgttacaacaaccattttg 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  25552905 atcaaagtacacgatctctgttacaacaaccattttg 25552941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 185
Target Start/End: Original strand, 21180347 - 21180442
Alignment:
Q  90 cgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccaggtacgtccttagaag 185  Q
    ||||||||||| ||  | ||||||||||||  |||||||||| |||||||  ||||| |||||||| |||||||||  | ||||||||||| ||||    
T  21180347 cgactaatccggctcgtgcgtagaggcatgtgcactggccaagtgttgttctccatgggaatcgaatccggtattcttcgggtacgtccttggaag 21180442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 158
Target Start/End: Complemental strand, 34722788 - 34722685
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| ||||||||||||||  |||||||||||| ||||||||||| ||  | ||||||| ||||  ||||| ||||  ||||||  || ||||||||||    
T  34722788 gctttcgcaccggtttctgatccatcaaaggtgggcgactaatccggctcgtgcgtagagacatgtgcactgaccaagcgttgttctccctgagaatcga 34722689  T
Q  155 accc 158  Q
    ||||    
T  34722688 accc 34722685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 55 - 141
Target Start/End: Complemental strand, 26805404 - 26805318
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttc 141  Q
    ||||||||| ||||||  ||  || ||||||||| |||||||||||||| || ||||||||||||  ||||||||||| || |||||    
T  26805404 gcttttgcatcggttttcgagccaccaaaggtgggcgactaatccgactcatgcgtagaggcatgtgcactggccaaacgtcgtttc 26805318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 30721888 - 30721978
Alignment:
Q  90 cgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccaggtacgtcctt 180  Q
    |||||||||||||| |||||||||| ||||| ||||| |||| ||||||| |||  | ||||| || ||| ||||| ||| ||||||||||    
T  30721888 cgactaatccgactcatacgtagagacatgcgcactgaccaagtgttgttcccccagtgaatcaaatccgatattcaccatgtacgtcctt 30721978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 185
Target Start/End: Complemental strand, 15079538 - 15079461
Alignment:
Q  108 cgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccaggtacgtccttagaag 185  Q
    ||||||| |||||||||||| |||  |||||| ||| ||  |||||||||| ||||||||| ||||||||||| ||||    
T  15079538 cgtagagtcatgcacactggtcaagcgttgttccccctggaaatcgaaccctgtattccccgggtacgtccttggaag 15079461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 60 - 141
Target Start/End: Original strand, 20963113 - 20963194
Alignment:
Q  60 tgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttc 141  Q
    |||| ||||||  ||| |||||||||||| ||||||||| | || ||||||||||||||| ||| ||| ||| |||||||||    
T  20963113 tgcatcggttttcgacccatcaaaggtgggcgactaatctgcctcatacgtagaggcatgtacattggtcaagtgttgtttc 20963194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 168
Target Start/End: Original strand, 45263718 - 45263778
Alignment:
Q  108 cgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattcccc 168  Q
    ||||||||||||| ||||||||||  |||||| ||  || |||||||||||||||||||||    
T  45263718 cgtagaggcatgcgcactggccaagcgttgttccctctgggaatcgaacccggtattcccc 45263778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 108 - 179
Target Start/End: Complemental strand, 33005806 - 33005736
Alignment:
Q  108 cgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccaggtacgtcct 179  Q
    ||||||||||||| |||||||||| ||||| ||||| || |||  |||||||||||||| | ||||||||||    
T  33005806 cgtagaggcatgcgcactggccaagtgttg-ttcccctgggaacagaacccggtattccacgggtacgtcct 33005736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 168
Target Start/End: Original strand, 14853389 - 14853478
Alignment:
Q  81 aaaggtggacgactaatccgacttatacgtagag--gcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattcccc 168  Q
    |||| |||||||||||||||||| ||  ||||||  |||| | ||||||||||| |||||| ||| ||| ||||||| | ||||||||||    
T  14853389 aaagatggacgactaatccgactcatgagtagagaggcatacgcactggccaaaagttgttccccctgaaaatcgaatctggtattcccc 14853478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 108 - 180
Target Start/End: Original strand, 2149245 - 2149318
Alignment:
Q  108 cgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaac-ccggtattccccaggtacgtcctt 180  Q
    ||||||||||||| ||||||||||| ||| || |||  | ||||||||| |||||||||||||| ||| |||||    
T  2149245 cgtagaggcatgcgcactggccaaacgttattcccccagtgaatcgaactccggtattccccagatacatcctt 2149318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 53 - 118
Target Start/End: Original strand, 34738329 - 34738394
Alignment:
Q  53 ttgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcat 118  Q
    ||||||||||||||||||| |||  | ||  ||||||||||||||||||||  | |||||||||||    
T  34738329 ttgcttttgcaccggtttccgacctaccattggtggacgactaatccgactcgtgcgtagaggcat 34738394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 61; Significance: 3e-26; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 53 - 185
Target Start/End: Original strand, 3418509 - 3418641
Alignment:
Q  53 ttgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatc 152  Q
    ||||||| ||||||||||||||| ||  |||||||||||||||||| |||| || |||||| |||||| |||||||||| ||||||| | | | | ||||    
T  3418509 ttgctttcgcaccggtttctgacccactaaaggtggacgactaatctgactcatgcgtagacgcatgcgcactggccaagtgttgttcctcctaaaaatc 3418608  T
Q  153 gaacccggtattccccaggtacgtccttagaag 185  Q
    ||||||| |||||||||| ||||||||| ||||    
T  3418609 gaacccgatattccccagatacgtccttggaag 3418641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 61 - 185
Target Start/End: Original strand, 15884560 - 15884683
Alignment:
Q  61 gcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccgg 160  Q
    ||||||||||| ||| || ||||||||| ||||||||||| ||  | ||||||||||||| |||| ||||| ||||| ||||| || |||||||||||||    
T  15884560 gcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcacttgccaagtgttg-ttcccctgggaatcgaacccgg 15884658  T
Q  161 tattccccaggtacgtccttagaag 185  Q
    |||||||||||||||||||| ||||    
T  15884659 tattccccaggtacgtccttggaag 15884683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 81 - 180
Target Start/End: Original strand, 33401823 - 33401922
Alignment:
Q  81 aaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccaggtacgtcctt 180  Q
    |||||||| |||||||||||||| || |||||||||||||||||||| ||| ||||||| ||| ||| ||||||||||||||||||||  ||||||||||    
T  33401823 aaaggtgggcgactaatccgactcatgcgtagaggcatgcacactggtcaagtgttgttccccctgaaaatcgaacccggtattccccgagtacgtcctt 33401922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 55 - 185
Target Start/End: Complemental strand, 14846687 - 14846558
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| |||||| |||| ||| || ||||||||||||||| ||| |||| || ||||||||||||| ||||| ||||   ||||| ||| ||||||||||    
T  14846687 gctttcgcaccgatttccgacccaccaaaggtggacgacttatctgactcatgcgtagaggcatgcgcactgaccaatcattgttcccc-tgagaatcga 14846589  T
Q  155 acccggtattccccaggtacgtccttagaag 185  Q
    |||||||||||||| ||||||||||||||||    
T  14846588 acccggtattccccgggtacgtccttagaag 14846558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 53 - 185
Target Start/End: Original strand, 9859991 - 9860124
Alignment:
Q  53 ttgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatc 152  Q
    ||||||||||| ||||||| ||  || ||| ||||||||||||||| | || ||  ||||||||||||||||||||||| ||||||| ||| || |||||    
T  9859991 ttgcttttgcatcggtttccgatccaccaatggtggacgactaatctggctcatgtgtagaggcatgcacactggccaagtgttgttccccctgggaatc 9860090  T
Q  153 gaacccggtattccccagg-tacgtccttagaag 185  Q
    |||||||||||||||| || ||||||||| ||||    
T  9860091 gaacccggtattcccccggatacgtccttggaag 9860124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 53 - 180
Target Start/End: Complemental strand, 45521282 - 45521156
Alignment:
Q  53 ttgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatc 152  Q
    ||||||| ||||||||||| ||| |||||||||||  ||||||||||| || || ||||||||||||| |||||  ||| ||||| ||||| || |||||    
T  45521282 ttgctttcgcaccggtttccgacccatcaaaggtgagcgactaatccggctcatgcgtagaggcatgcgcactgatcaagtgttg-ttcccctgggaatc 45521184  T
Q  153 gaacccggtattccccaggtacgtcctt 180  Q
    |||||||||||||||| ||||| |||||    
T  45521183 gaacccggtattccccgggtacatcctt 45521156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 55 - 180
Target Start/End: Original strand, 14666069 - 14666194
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| ||||||||||  ||| || |||  |||| ||||||||| | ||| | ||||||||||||| |||||||||| ||||||||||| || |||||||    
T  14666069 gctttcgcaccggttttcgacccaccaactgtgggcgactaatctggcttgtgcgtagaggcatgcgcactggccaagtgttgtttcccctgggaatcga 14666168  T
Q  155 acccggtattccccaggtacgtcctt 180  Q
    |||||||||||||| | |||||||||    
T  14666169 acccggtattccccggatacgtcctt 14666194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 53 - 185
Target Start/End: Complemental strand, 17981555 - 17981423
Alignment:
Q  53 ttgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatc 152  Q
    ||||||| ||||||||||| |||||| ||||| ||| | |||||| |||||  | |||||||||||||||||||| |||  |||||| ||| || |||||    
T  17981555 ttgctttcgcaccggtttccgactcaccaaagctgggcaactaattcgactcgtgcgtagaggcatgcacactggtcaagagttgttccccctgggaatc 17981456  T
Q  153 gaacccggtattccccaggtacgtccttagaag 185  Q
    |||||||||||| ||| ||||| ||||| ||||    
T  17981455 gaacccggtatttcccgggtacatccttggaag 17981423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 61 - 180
Target Start/End: Original strand, 4479300 - 4479418
Alignment:
Q  61 gcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccgg 160  Q
    ||||||||||| ||| || ||||||||||||||||||||  || || ||||||||||||| ||||||||||  |||| ||||| || |||||||| ||||    
T  4479300 gcaccggtttccgacccaccaaaggtggacgactaatccagctcatgcgtagaggcatgcgcactggccaagcgttg-ttcccctgggaatcgaatccgg 4479398  T
Q  161 tattccccaggtacgtcctt 180  Q
    |||||  |||||||||||||    
T  4479399 tattctacaggtacgtcctt 4479418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 55 - 185
Target Start/End: Complemental strand, 2964188 - 2964058
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| ||||||||||||||| || ||||||||| |||||||||||  |  | |||||||||||||||| |||||||  |||||| | |||  |||||||    
T  2964188 gctttcgcaccggtttctgacccaccaaaggtgggcgactaatccggttcgtgcgtagaggcatgcacattggccaagcgttgttcctcatcggaatcga 2964089  T
Q  155 acccggtattccccaggtacgtccttagaag 185  Q
    || ||||||||||| ||||||| ||| ||||    
T  2964088 acacggtattccccgggtacgttcttggaag 2964058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 55 - 185
Target Start/End: Complemental strand, 8141214 - 8141084
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| ||| ||||||||||| || |||| ||||||||||||| |  || || ||||||||||||| ||||||||||  |||||||||| ||  ||||||    
T  8141214 gctttcgcatcggtttctgacccaccaaatgtggacgactaattcagctcatgcgtagaggcatgcgcactggccaagcgttgtttcccctggaaatcga 8141115  T
Q  155 acccggtattccccaggtacgtccttagaag 185  Q
    ||||||||||||||   ||||||||| ||||    
T  8141114 acccggtattccccgaatacgtccttggaag 8141084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 55 - 180
Target Start/End: Complemental strand, 10927718 - 10927593
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| ||| ||||||| ||| ||  ||||||| |||||||||||| || || ||||||||||||| ||||||||||  |||||| | | |  |||||||    
T  10927718 gctttcgcatcggtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctaggaatcga 10927619  T
Q  155 acccggtattccccaggtacgtcctt 180  Q
    |||||||||||||| |||||||||||    
T  10927618 acccggtattccccgggtacgtcctt 10927593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 65 - 186
Target Start/End: Complemental strand, 26571026 - 26570905
Alignment:
Q  65 cggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtatt 164  Q
    ||||||| |||||||||||||||||||||||||||| || || |||||| |||| ||||||||||||  |||||| ||| |  |||| ||||||| ||||    
T  26571026 cggtttccgactcatcaaaggtggacgactaatccggctcatgcgtagatgcatacacactggccaagcgttgttccccctaggaattgaacccgatatt 26570927  T
Q  165 ccccaggtacgtccttagaagt 186  Q
     ||||| ||| |||||| ||||    
T  26570926 tcccagatacatccttaaaagt 26570905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 55 - 185
Target Start/End: Original strand, 2467116 - 2467246
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| ||||||||||| ||| || |||  |||||||||||||||| || || | ||||| ||||| ||||||||||  |||||| ||| ||  ||||||    
T  2467116 gctttcgcaccggtttccgacacaccaattgtggacgactaatccggctcatgcatagagacatgcgcactggccaagagttgttccccctggaaatcga 2467215  T
Q  155 acccggtattccccaggtacgtccttagaag 185  Q
    |||||||||||||| | ||||||||| ||||    
T  2467216 acccggtattccccggatacgtccttggaag 2467246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 56 - 185
Target Start/End: Original strand, 68097 - 68226
Alignment:
Q  56 cttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaa 155  Q
    |||||||||||||||| ||| ||||||||||| |||| ||||||| ||  |  ||| ||||||||| |||||||||| |||||| | | |||||||||||    
T  68097 cttttgcaccggtttccgacccatcaaaggtgaacgattaatccggctcgtgtgtaaaggcatgcatactggccaaacgttgttcctcctgagaatcgaa 68196  T
Q  156 cccggtattccccaggtacgtccttagaag 185  Q
    |||| | ||||||  | |||||||| ||||    
T  68197 cccgatcttccccgagcacgtccttggaag 68226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 56 - 185
Target Start/End: Complemental strand, 2209894 - 2209765
Alignment:
Q  56 cttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaa 155  Q
    |||| ||||| |||||||||  | ||| ||||  |||||||||| |||||| ||||| | ||||| ||||| |||||||||||||||| | |||||| ||    
T  2209894 ctttcgcaccagtttctgacctaccaatggtgagcgactaatccaacttatgcgtagggacatgcgcactgaccaaatgttgtttcccctaagaatcaaa 2209795  T
Q  156 cccggtattccccaggtacgtccttagaag 185  Q
    |||| |||||| |||  |||||||||||||    
T  2209794 cccgatattcctcagacacgtccttagaag 2209765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 53 - 170
Target Start/End: Complemental strand, 43033015 - 43032898
Alignment:
Q  53 ttgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatc 152  Q
    ||||||| ||||||||||||||| || ||||||||| ||||||||||| ||  |  |||||||||||| ||||||||||  |||||| ||| || |||||    
T  43033015 ttgctttcgcaccggtttctgacccaccaaaggtgggcgactaatccggctcgtgtgtagaggcatgcgcactggccaagcgttgttccccctgggaatc 43032916  T
Q  153 gaacccggtattccccag 170  Q
    ||| ||| |||| |||||    
T  43032915 gaatccgatatttcccag 43032898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 56 - 185
Target Start/End: Original strand, 44893277 - 44893406
Alignment:
Q  56 cttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaa 155  Q
    |||||||||||||||| ||| |||||| ||||  ||| ||||||| ||  | ||||||||||||||||||||||||   ||||| ||| |   ||| |||    
T  44893277 cttttgcaccggtttccgacccatcaagggtgagcgattaatccggctcgtgcgtagaggcatgcacactggccaagcattgttccccctagaaattgaa 44893376  T
Q  156 cccggtattccccaggtacgtccttagaag 185  Q
    ||||||||||||| ||||||||||| ||||    
T  44893377 cccggtattccccgggtacgtccttggaag 44893406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 55 - 186
Target Start/End: Complemental strand, 583924 - 583795
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| |||||||||||| |  |||||||||||| |||||||||||||| || ||||||||||||| |||||| |||  ||||||  || |  |||||||    
T  583924 gctttcgcaccggtttctaatccatcaaaggtgggcgactaatccgactcatgcgtagaggcatgcgcactggtcaagcgttgtt--ccctaggaatcga 583827  T
Q  155 acccggtattccccaggtacgtccttagaagt 186  Q
    |||||||||| | |  |||||||||| |||||    
T  583826 acccggtatttctcgagtacgtccttggaagt 583795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 56 - 164
Target Start/End: Complemental strand, 18374121 - 18374013
Alignment:
Q  56 cttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaa 155  Q
    |||||||||||||||  ||| || ||||| ||||||||||||||| || || ||||||||||||| |||||| |||  ||||||  || |||||||||||    
T  18374121 cttttgcaccggttttcgacccaccaaagttggacgactaatccggctcatgcgtagaggcatgcgcactggtcaagcgttgttctccctgagaatcgaa 18374022  T
Q  156 cccggtatt 164  Q
    || ||||||    
T  18374021 cctggtatt 18374013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 53 - 169
Target Start/End: Complemental strand, 43027419 - 43027303
Alignment:
Q  53 ttgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatc 152  Q
    ||||||| ||| ||||||| ||| |||||||| ||||||||||||||| || || ||||||||||||| || ||| |||  |||||| | | || |||||    
T  43027419 ttgctttcgcatcggtttccgacccatcaaagatggacgactaatccggctcatgcgtagaggcatgcgcattggacaatcgttgttcctcctgggaatc 43027320  T
Q  153 gaacccggtattcccca 169  Q
    |||||| ||||||||||    
T  43027319 gaacccagtattcccca 43027303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 81 - 180
Target Start/End: Complemental strand, 6100558 - 6100459
Alignment:
Q  81 aaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccaggtacgtcctt 180  Q
    ||||||| |||||||||||| || || ||||| ||||||| ||||||||||  |||||| | | || ||||||||||||||||||||| | |||||||||    
T  6100558 aaaggtgaacgactaatccggctcatgcgtagtggcatgcgcactggccaagcgttgttcctcctgggaatcgaacccggtattccccggatacgtcctt 6100459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 57 - 180
Target Start/End: Complemental strand, 11786025 - 11785903
Alignment:
Q  57 ttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaac 156  Q
    ||||||||||||||| ||  |||||||| ||  ||| ||||| | || || ||||||||||||||||||| ||||| |||| | ||| || ||||||||     
T  11786025 ttttgcaccggtttccgatccatcaaagatgagcgattaatctggctcatgcgtagaggcatgcacactgcccaaacgttgctccccttg-gaatcgaat 11785927  T
Q  157 ccggtattccccaggtacgtcctt 180  Q
    |||||||||||| |||||||||||    
T  11785926 ccggtattccccgggtacgtcctt 11785903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 108 - 185
Target Start/End: Complemental strand, 13085583 - 13085506
Alignment:
Q  108 cgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccaggtacgtccttagaag 185  Q
    |||||||| |||||||||||| ||| |||||| ||  |||||||||||||||||||||||| | ||||||||| ||||    
T  13085583 cgtagaggtatgcacactggctaaacgttgttccctctgagaatcgaacccggtattccccggatacgtccttggaag 13085506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 55 - 185
Target Start/End: Complemental strand, 24837354 - 24837224
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| ||||| ||||| ||  || ||||||||||||||||||||  ||  | | |||||||||| |||||||||||  ||||||  || || |||||||    
T  24837354 gctttcgcaccagtttccgatccaccaaaggtggacgactaatcctgctcgtgcttagaggcatgaacactggccaagcgttgttctccctgggaatcga 24837255  T
Q  155 acccggtattccccaggtacgtccttagaag 185  Q
    || ||||||||||| ||||||| ||| ||||    
T  24837254 acacggtattccccgggtacgtacttggaag 24837224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 73 - 159
Target Start/End: Complemental strand, 29933866 - 29933780
Alignment:
Q  73 gactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccg 159  Q
    ||||||||||||| |  ||||||||||| || ||||||||||||||| ||||||| ||| |||||||  || || ||||||||||||    
T  29933866 gactcatcaaaggggtgcgactaatccggctcatacgtagaggcatgtacactggtcaagtgttgttctccctgggaatcgaacccg 29933780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 165
Target Start/End: Complemental strand, 8817144 - 8817035
Alignment:
Q  56 cttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaa 155  Q
    |||| ||||||||||| |||||||||||| | ||| | ||||||||||  | ||||||||||| || ||  | ||| |||||||||| ||| ||||||||    
T  8817144 ctttcgcaccggtttccgactcatcaaagatagacaagtaatccgactcgtgcgtagaggcatacataccagtcaagtgttgtttcctatgggaatcgaa 8817045  T
Q  156 cccggtattc 165  Q
    |||| |||||    
T  8817044 cccgatattc 8817035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 185
Target Start/End: Original strand, 38922465 - 38922542
Alignment:
Q  108 cgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccaggtacgtccttagaag 185  Q
    |||| |||||||| ||||||||||  |||||| ||  || ||||||||||||||||||||| ||||||||||| ||||    
T  38922465 cgtaaaggcatgcgcactggccaagcgttgttccctctgggaatcgaacccggtattccccgggtacgtccttggaag 38922542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 84 - 168
Target Start/End: Complemental strand, 6042904 - 6042820
Alignment:
Q  84 ggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattcccc 168  Q
    ||||| ||||||||||| || || |||  |||||||| ||||||||||  |||||| ||| || |||||||||||||||||||||    
T  6042904 ggtgggcgactaatccggctcatgcgtttaggcatgcgcactggccaagcgttgttccccttgggaatcgaacccggtattcccc 6042820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 108 - 180
Target Start/End: Complemental strand, 34846872 - 34846801
Alignment:
Q  108 cgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccaggtacgtcctt 180  Q
    |||||||||||||| |||||||||  ||||||  ||||| ||||||||||||||||| ||| |||||||||||    
T  34846872 cgtagaggcatgcatactggccaagcgttgttcaccatgggaatcgaacccggtatt-cccgggtacgtcctt 34846801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 50 - 166
Target Start/End: Complemental strand, 36662521 - 36662406
Alignment:
Q  50 ttcttgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgaga 149  Q
    ||||| |||| ||| ||||||| ||  ||| ||| ||||||||||||||||  | |||||||||||||||| ||||||| || | ||| ||||| ||| |    
T  36662521 ttctttctttcgcatcggtttccgatccattaaaagtggacgactaatccggttcatacgtagaggcatgcgcactggctaagtattg-ttcccctgaaa 36662423  T
Q  150 atcgaacccggtattcc 166  Q
    |||||||||| ||||||    
T  36662422 atcgaacccgatattcc 36662406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 180
Target Start/End: Original strand, 1013001 - 1013100
Alignment:
Q  81 aaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccaggtacgtcctt 180  Q
    ||||||| |||| |||| || || || ||||||||||||   |||||||||  |||||| ||| || ||||||||||||||||||||| | |||||||||    
T  1013001 aaaggtgaacgattaattcggctcatgcgtagaggcatgtgtactggccaagcgttgttccccctgggaatcgaacccggtattccccggatacgtcctt 1013100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 168
Target Start/End: Original strand, 8997540 - 8997655
Alignment:
Q  53 ttgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatc 152  Q
    ||||||| ||||||||||| ||| || ||||| || |||||||||| | || || |||| ||||||||  |||||| ||| |||||| ||| |  |||||    
T  8997540 ttgctttcgcaccggtttccgacccaccaaagatgaacgactaatctggctcatgcgtataggcatgcgaactggcgaaacgttgttccccttaggaatc 8997639  T
Q  153 gaacccggtattcccc 168  Q
    |||| |||||||||||    
T  8997640 gaacacggtattcccc 8997655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 57 - 148
Target Start/End: Original strand, 13357956 - 13358047
Alignment:
Q  57 ttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgag 148  Q
    ||||||||||||||| ||| ||  ||||| |||||||||||||| ||  | | |||||||||||||| |||||||| |||||| ||| ||||    
T  13357956 ttttgcaccggtttccgacccactaaagggggacgactaatccggctcgtgcatagaggcatgcacattggccaaacgttgttccccctgag 13358047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 185
Target Start/End: Original strand, 34710596 - 34710695
Alignment:
Q  86 tggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccaggtacgtccttagaag 185  Q
    |||||||||| |||||||| |  ||| |||||||| |||| ||||| ||||||||||| || |||||||| ||||||||  ||  |||||||||| ||||    
T  34710596 tggacgactagtccgacttgtgtgtaaaggcatgcgcactagccaagtgttgtttcccctgggaatcgaatccggtattttccgagtacgtccttggaag 34710695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 55 - 120
Target Start/End: Complemental strand, 993300 - 993235
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgc 120  Q
    ||||| |||||| |||||||  || |||||||||||||||||||| ||| |||||||||| |||||    
T  993300 gctttcgcaccgatttctgaaccaccaaaggtggacgactaatccaactcatacgtagagacatgc 993235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 96 - 165
Target Start/End: Complemental strand, 28319383 - 28319314
Alignment:
Q  96 atccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattc 165  Q
    ||||| |||| |||||||| ||||||||||| |||| ||||||||| | | |||||||||||| ||||||    
T  28319383 atccggcttagacgtagagacatgcacactgaccaagtgttgtttctcctaagaatcgaacccagtattc 28319314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 180
Target Start/End: Complemental strand, 22958857 - 22958757
Alignment:
Q  80 caaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccaggtacgtcct 179  Q
    ||||||||||||||||||||| || || | ||||| ||||||||||| ||||   ||||| ||  ||| |||||||  || |||||| ||||||||||||    
T  22958857 caaaggtggacgactaatccggctcatgcatagagacatgcacactgaccaagcattgttccctctgaaaatcgaattcgatattccacaggtacgtcct 22958758  T
Q  180 t 180  Q
    |    
T  22958757 t 22958757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 166
Target Start/End: Original strand, 33935768 - 33935844
Alignment:
Q  90 cgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattcc 166  Q
    |||||||||||||| || |||| |||||||| |||||||||| |||||||  || |  |||||||| ||||||||||    
T  33935768 cgactaatccgactcatgcgtataggcatgcgcactggccaagtgttgttctccctaggaatcgaatccggtattcc 33935844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 166
Target Start/End: Complemental strand, 23895679 - 23895569
Alignment:
Q  56 cttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaa 155  Q
    |||| ||||| ||||| ||| |||||||||||||||| ||||||  ||  | |||||||| |||| ||||||||||  ||||||  ||||||| ||| ||    
T  23895679 ctttcgcacccgtttccgacccatcaaaggtggacgattaatccatctcgtgcgtagaggtatgcgcactggccaagcgttgttctccatgaggatccaa 23895580  T
Q  156 cccggtattcc 166  Q
    || | ||||||    
T  23895579 cctgatattcc 23895569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 141
Target Start/End: Original strand, 24938568 - 24938646
Alignment:
Q  63 accggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttc 141  Q
    ||||||||| ||  ||||||||||||| ||||||||||  | || ||||||||||||| || || |||| |||||||||    
T  24938568 accggtttccgatccatcaaaggtggatgactaatccggttcatgcgtagaggcatgcgcattgaccaagtgttgtttc 24938646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 176
Target Start/End: Original strand, 10698961 - 10699046
Alignment:
Q  91 gactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccaggtacgt 176  Q
    ||||||||| |||  ||||||||||||||| ||||||||||| | ||||||| ||| |  ||||| ||| ||||||| || |||||    
T  10698961 gactaatccaactcgtacgtagaggcatgcgcactggccaaacgctgtttcctatgtgggtcgaatccgatattccctagatacgt 10699046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 77 - 142
Target Start/End: Original strand, 35496275 - 35496340
Alignment:
Q  77 catcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcc 142  Q
    |||||||||||| ||| ||||||  ||  ||||||||||||||| ||||| |||| ||||||||||    
T  35496275 catcaaaggtgggcgattaatccagctcgtacgtagaggcatgcgcactgaccaagtgttgtttcc 35496340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 53 - 168
Target Start/End: Complemental strand, 6968 - 6853
Alignment:
Q  53 ttgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatc 152  Q
    ||||||| ||||||||||| ||| || ||||||||  ||||||||||| || || ||||||||||||| |||||||||| ||||||| ||| || |||||    
T  6968 ttgctttcgcaccggtttccgacccaccaaaggtgagcgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatc 6869  T
Q  153 gaacccggtattcccc 168  Q
    ||||||||||||||||    
T  6868 gaacccggtattcccc 6853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 56 - 185
Target Start/End: Complemental strand, 12780 - 12651
Alignment:
Q  56 cttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaa 155  Q
    |||| ||||||||||||||| |||||||||||| |||||||||||  |  | ||||||||||||||||||||||||  |||||| | | |  ||||||||    
T  12780 ctttcgcaccggtttctgacccatcaaaggtgggcgactaatccggttcgtgcgtagaggcatgcacactggccaagcgttgttcctcctctgaatcgaa 12681  T
Q  156 cccggtattccccaggtacgtccttagaag 185  Q
    ||||||||||||| || |||||||| ||||    
T  12680 cccggtattccccgggcacgtccttggaag 12651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 63 - 167
Target Start/End: Complemental strand, 41147 - 41043
Alignment:
Q  63 accggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggta 162  Q
    ||||||||| |||||| ||||| ||| ||||||||||| ||  | ||||||||||||||||||| |||| ||||||| ||| ||||||||||||||| ||    
T  41147 accggtttccgactcaccaaagatgggcgactaatccggctcgtgcgtagaggcatgcacactgaccaagtgttgttccccttgagaatcgaacccgata 41048  T
Q  163 ttccc 167  Q
    |||||    
T  41047 ttccc 41043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 63 - 180
Target Start/End: Original strand, 7841 - 7958
Alignment:
Q  63 accggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggta 162  Q
    ||||||||| ||  || ||||||||| ||||||||||  || || ||||||||||||| |||||||||| |||| || ||| || ||||| |||||||||    
T  7841 accggtttccgatccaccaaaggtgggcgactaatccagctaatgcgtagaggcatgcgcactggccaagtgtttttccccttgggaatcaaacccggta 7940  T
Q  163 ttccccaggtacgtcctt 180  Q
    |||||| |||||||||||    
T  7941 ttccccgggtacgtcctt 7958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 55 - 168
Target Start/End: Original strand, 94978 - 95090
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaa-ggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcg 153  Q
    |||||||||||| |||| ||| || |||| ||||| ||||||||||| || || |||| |||||||| |||||| |||| ||||||||| | || |||||    
T  94978 gcttttgcaccgatttccgacccaccaaatggtgggcgactaatccggctcatgcgtaaaggcatgcgcactggtcaaacgttgtttccta-ga-aatcg 95075  T
Q  154 aacccggtattcccc 168  Q
    |||| ||||||||||    
T  95076 aacctggtattcccc 95090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 66 - 185
Target Start/End: Complemental strand, 9945 - 9826
Alignment:
Q  66 ggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattc 165  Q
    |||||||||| || ||||||||||||||||||||| ||  | ||||||||||||| ||||||||||  |||||| ||| ||  ||||||| |||||||||    
T  9945 ggtttctgacccaccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccctggaaatcgaatccggtattc 9846  T
Q  166 cccaggtacgtccttagaag 185  Q
    | ||| ||| ||||| ||||    
T  9845 ctcagatacatccttggaag 9826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 55 - 166
Target Start/End: Original strand, 8699 - 8810
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| ||||| ||||| ||| || ||||||||||||||||||||  || || |||||||||| || ||||||||||  |||||| ||| || |||||||    
T  8699 gctttcgcaccagtttccgacccaccaaaggtggacgactaatccagctcatgcgtagaggcaagcgcactggccaagcgttgttccccctgggaatcga 8798  T
Q  155 acccggtattcc 166  Q
    ||||||||||||    
T  8799 acccggtattcc 8810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0209 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 55 - 186
Target Start/End: Complemental strand, 12684 - 12555
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| |||||||||||| |  |||||||||||| |||||||||||||| || ||||||||||||| |||||| |||  ||||||  || |  |||||||    
T  12684 gctttcgcaccggtttctaatccatcaaaggtgggcgactaatccgactcatgcgtagaggcatgcgcactggtcaagcgttgtt--ccctaggaatcga 12587  T
Q  155 acccggtattccccaggtacgtccttagaagt 186  Q
    |||||||||| | |  |||||||||| |||||    
T  12586 acccggtatttctcgagtacgtccttggaagt 12555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 53 - 155
Target Start/End: Complemental strand, 149498 - 149396
Alignment:
Q  53 ttgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatc 152  Q
    ||||||||||||||||||||||| || ||  ||||| |||||||||   ||  |||||||||||||||||||||| |||  |||||| ||| ||||||||    
T  149498 ttgcttttgcaccggtttctgacccaccattggtgggcgactaatctacctcgtacgtagaggcatgcacactggtcaagcgttgttccccctgagaatc 149399  T
Q  153 gaa 155  Q
    |||    
T  149398 gaa 149396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 53 - 177
Target Start/End: Original strand, 1610 - 1734
Alignment:
Q  53 ttgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatc 152  Q
    ||||||| ||||||||||  ||| || ||||||||| ||||||||  | || || ||||||||||||| ||||||| ||  |||||| ||| ||  ||||    
T  1610 ttgctttcgcaccggttttcgacccaccaaaggtgggcgactaatttggctcatgcgtagaggcatgcgcactggctaatcgttgttccccctggaaatc 1709  T
Q  153 gaacccggtattccccaggtacgtc 177  Q
    ||||| ||||||||||||| |||||    
T  1710 gaacctggtattccccaggcacgtc 1734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 109 - 185
Target Start/End: Complemental strand, 8231 - 8156
Alignment:
Q  109 gtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccaggtacgtccttagaag 185  Q
    |||||||||||| ||||||||||  |||||| ||| || ||||||||||||||||||||| ||||||||||| ||||    
T  8231 gtagaggcatgcgcactggccaagcgttgtt-cccttgggaatcgaacccggtattccccgggtacgtccttggaag 8156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 56 - 174
Target Start/End: Original strand, 42831 - 42949
Alignment:
Q  56 cttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaa 155  Q
    |||| ||||||||||| ||| || ||||||||| ||||||||||| || ||  |||||||||||| ||||| ||||   |||||  || |  ||||||||    
T  42831 ctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcatgtgtagaggcatgcgcactgaccaagcattgttctccctaggaatcgaa 42930  T
Q  156 cccggtattccccaggtac 174  Q
    |||| ||||||||||||||    
T  42931 cccgatattccccaggtac 42949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 53 - 180
Target Start/End: Complemental strand, 9556 - 9422
Alignment:
Q  53 ttgctttt-gcaccggtttctgactcatcaaaggtggacgactaatccgacttat-------acgtagaggcatgcacactggccaaatgttgtttccca 144  Q
    |||||||| ||||||||||||||| || ||||||||||||||||||  | || ||       || ||||||||| |  |||||||||  |||||| |||     
T  9556 ttgcttttcgcaccggtttctgacccaccaaaggtggacgactaatttggctcatgcgtagaacttagaggcat-cttactggccaagcgttgttccccc 9458  T
Q  145 tgagaatcgaacccggtattccccaggtacgtcctt 180  Q
    || |||||||||||||||||||||| ||||||||||    
T  9457 tgggaatcgaacccggtattccccaagtacgtcctt 9422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 36; Significance: 0.00000000002; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 132
Target Start/End: Complemental strand, 219482 - 219403
Alignment:
Q  53 ttgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaa 132  Q
    ||||||||||||||||||  ||  |||||||||||||||||||||||   |  | ||||||||||||| |||||||||||    
T  219482 ttgcttttgcaccggttttcgatccatcaaaggtggacgactaatccagttcgtgcgtagaggcatgcgcactggccaaa 219403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 90 - 185
Target Start/End: Original strand, 249338 - 249433
Alignment:
Q  90 cgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccaggtacgtccttagaag 185  Q
    ||||||||||||||  | |||||||| |||  |||||| |||  ||| ||  || ||||||||||||| |||||||||||  ||||||||||||||    
T  249338 cgactaatccgactcgtgcgtagaggtatgtgcactggtcaagcgttattctccctgagaatcgaacctggtattccccaaatacgtccttagaag 249433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 108 - 185
Target Start/End: Original strand, 271125 - 271202
Alignment:
Q  108 cgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccccaggtacgtccttagaag 185  Q
    ||||||| ||||| ||||| ||||  |||||| ||| || |||||||||||| ||||| || ||||||||||| ||||    
T  271125 cgtagagacatgcgcactgaccaagcgttgttccccctgggaatcgaacccgatattctccgggtacgtccttggaag 271202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 50 - 180
Target Start/End: Complemental strand, 6088 - 5959
Alignment:
Q  50 ttcttgcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgaga 149  Q
    |||||||||  ||| ||||||| ||| || ||| |||||||||||||| || || || ||||||||||||  ||||||||||  |||| | ||| ||  |    
T  6088 ttcttgcttaagcatcggtttccgacccaccaatggtggacgactaattcgtctcatgcgtagaggcatgtgcactggccaagcgttg-tccccctggaa 5990  T
Q  150 atcgaacccggtattccccaggtacgtcctt 180  Q
    ||||||||| ||||||||| |||||| ||||    
T  5989 atcgaacccagtattccccgggtacgccctt 5959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 61 - 185
Target Start/End: Complemental strand, 68619 - 68498
Alignment:
Q  61 gcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccgg 160  Q
    ||||||||||  ||| || ||||||||| ||||||||||| ||  | ||||||||||||| |||   ||||  |||||| ||| || ||||||||||||     
T  68619 gcaccggttttcgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcac---ccaagcgttgttccccctgggaatcgaacccga 68523  T
Q  161 tattccccaggtacgtccttagaag 185  Q
    |||| ||| ||||||||||| ||||    
T  68522 tatttcccgggtacgtccttggaag 68498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 155
Target Start/End: Original strand, 155709 - 155809
Alignment:
Q  55 gcttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcga 154  Q
    ||||| ||||||| ||| ||| || ||||||||| ||||||||||| ||  | ||||||||||||| |||| |||||  |||||| ||| || |||||||    
T  155709 gctttcgcaccggcttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactagccaagcgttgttccccctgggaatcga 155808  T
Q  155 a 155  Q
    |    
T  155809 a 155809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 167
Target Start/End: Complemental strand, 72708 - 72631
Alignment:
Q  90 cgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaacccggtattccc 167  Q
    ||||||||||| ||||| | | ||||||||| |||||| |||  |||||| ||| ||  |||||||||||||||||||    
T  72708 cgactaatccggcttatgctttgaggcatgcgcactggtcaagcgttgttccccttggaaatcgaacccggtattccc 72631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 185
Target Start/End: Complemental strand, 224427 - 224298
Alignment:
Q  56 cttttgcaccggtttctgactcatcaaaggtggacgactaatccgacttatacgtagaggcatgcacactggccaaatgttgtttcccatgagaatcgaa 155  Q
    |||| ||||||||||| ||| || ||||| ||||||||||||||| ||  | |||||||| |||  |||||  |||| ||| ||  || ||||| |||||    
T  224427 ctttcgcaccggtttccgacccaccaaagatggacgactaatccggctcgtgcgtagaggtatgtgcactgatcaaacgttattctccctgagattcgaa 224328  T
Q  156 cccggtattccccaggtacgtccttagaag 185  Q
    |||| ||||| ||   ||||||||||||||    
T  224327 cccgatattctccgaatacgtccttagaag 224298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University