View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8539_low_8 (Length: 237)

Name: NF8539_low_8
Description: NF8539
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8539_low_8
NF8539_low_8
[»] chr7 (61 HSPs)
chr7 (1-237)||(13849285-13849521)
chr7 (1-237)||(16573682-16573918)
chr7 (1-237)||(16591744-16591980)
chr7 (6-237)||(7529566-7529797)
chr7 (6-236)||(39995221-39995452)
chr7 (7-235)||(12208074-12208292)
chr7 (11-174)||(7506913-7507078)
chr7 (7-176)||(12201469-12201639)
chr7 (33-156)||(14039170-14039293)
chr7 (33-156)||(14349200-14349323)
chr7 (98-156)||(15103949-15104007)
chr7 (104-236)||(15690386-15690508)
chr7 (104-236)||(15697979-15698101)
chr7 (104-156)||(81690-81742)
chr7 (104-156)||(12800902-12800954)
chr7 (104-156)||(16187342-16187394)
chr7 (104-156)||(16475749-16475801)
chr7 (104-156)||(18009801-18009853)
chr7 (104-156)||(23442698-23442750)
chr7 (114-173)||(15339320-15339379)
chr7 (114-173)||(15710618-15710677)
chr7 (41-156)||(16668012-16668127)
chr7 (41-156)||(17642382-17642497)
chr7 (105-156)||(46681807-46681858)
chr7 (104-166)||(14250147-14250209)
chr7 (106-155)||(12554950-12554999)
chr7 (104-156)||(13318195-13318247)
chr7 (104-156)||(14169144-14169196)
chr7 (104-156)||(14173391-14173443)
chr7 (104-156)||(14581171-14581223)
chr7 (104-156)||(15097578-15097630)
chr7 (104-156)||(15437183-15437235)
chr7 (104-156)||(16073583-16073635)
chr7 (104-156)||(46348366-46348418)
chr7 (109-156)||(3328301-3328348)
chr7 (109-156)||(12695099-12695146)
chr7 (106-176)||(21518787-21518858)
chr7 (104-154)||(45185948-45185998)
chr7 (104-173)||(6412322-6412391)
chr7 (104-156)||(11857316-11857368)
chr7 (109-153)||(13020182-13020226)
chr7 (104-156)||(14265615-14265667)
chr7 (104-156)||(15722825-15722877)
chr7 (104-156)||(17182324-17182376)
chr7 (104-156)||(19146071-19146123)
chr7 (104-156)||(19600360-19600412)
chr7 (104-156)||(20745470-20745522)
chr7 (104-156)||(35962346-35962398)
chr7 (34-156)||(19152354-19152476)
chr7 (34-156)||(20751753-20751875)
chr7 (111-156)||(11219736-11219781)
chr7 (104-156)||(14281266-14281318)
chr7 (123-158)||(15085552-15085587)
chr7 (106-156)||(10520316-10520366)
chr7 (3-53)||(21518684-21518734)
chr7 (123-156)||(14945501-14945534)
chr7 (123-156)||(15373094-15373127)
chr7 (123-156)||(37243929-37243962)
chr7 (104-156)||(15142711-15142763)
chr7 (77-125)||(15731320-15731368)
chr7 (104-156)||(15839076-15839128)
[»] scaffold0004 (4 HSPs)
scaffold0004 (1-237)||(204727-204963)
scaffold0004 (3-165)||(384669-384830)
scaffold0004 (104-156)||(327260-327312)
scaffold0004 (104-156)||(321572-321624)
[»] chr8 (35 HSPs)
chr8 (1-237)||(43112466-43112702)
chr8 (2-235)||(15003479-15003711)
chr8 (12-237)||(20386945-20387169)
chr8 (3-235)||(22617076-22617307)
chr8 (1-233)||(22433992-22434223)
chr8 (3-237)||(22920355-22920589)
chr8 (15-176)||(15267686-15267848)
chr8 (3-156)||(20011630-20011783)
chr8 (41-156)||(25624215-25624330)
chr8 (104-156)||(14594366-14594418)
chr8 (104-156)||(21683305-21683357)
chr8 (104-156)||(21687654-21687706)
chr8 (104-156)||(21690047-21690099)
chr8 (104-156)||(23652600-23652652)
chr8 (104-156)||(20006744-20006796)
chr8 (104-156)||(21685697-21685749)
chr8 (104-156)||(36445377-36445429)
chr8 (104-158)||(20783482-20783536)
chr8 (104-158)||(22175678-22175732)
chr8 (111-156)||(20973646-20973691)
chr8 (104-156)||(20839551-20839603)
chr8 (104-156)||(22063195-22063247)
chr8 (104-156)||(22744213-22744265)
chr8 (104-156)||(33089387-33089439)
chr8 (104-156)||(41009086-41009138)
chr8 (104-155)||(22178103-22178154)
chr8 (104-156)||(11392210-11392262)
chr8 (104-156)||(22025192-22025244)
chr8 (104-156)||(22050715-22050767)
chr8 (104-156)||(31412114-31412166)
chr8 (104-156)||(31418296-31418348)
chr8 (104-167)||(19987808-19987871)
chr8 (104-154)||(1264543-1264593)
chr8 (104-173)||(19860012-19860081)
chr8 (188-233)||(23652674-23652719)
[»] chr4 (43 HSPs)
chr4 (1-237)||(8710987-8711223)
chr4 (2-237)||(33661949-33662185)
chr4 (2-225)||(13878231-13878454)
chr4 (6-237)||(16371104-16371335)
chr4 (2-174)||(21189341-21189513)
chr4 (2-173)||(13881888-13882059)
chr4 (6-232)||(15416262-15416488)
chr4 (3-176)||(15075857-15076031)
chr4 (104-176)||(32490262-32490335)
chr4 (104-156)||(18165901-18165953)
chr4 (104-156)||(30239581-30239633)
chr4 (104-157)||(14555698-14555751)
chr4 (104-156)||(15004728-15004780)
chr4 (104-156)||(15360438-15360490)
chr4 (104-156)||(16228735-16228787)
chr4 (104-156)||(16485153-16485205)
chr4 (104-156)||(17176875-17176927)
chr4 (104-156)||(18261810-18261862)
chr4 (104-156)||(18271775-18271827)
chr4 (104-156)||(41528700-41528752)
chr4 (104-156)||(53904961-53905013)
chr4 (104-158)||(10972550-10972604)
chr4 (67-165)||(15318458-15318556)
chr4 (109-167)||(23122104-23122162)
chr4 (104-173)||(20940759-20940828)
chr4 (104-156)||(11170856-11170908)
chr4 (104-156)||(14821866-14821918)
chr4 (3-139)||(15069295-15069431)
chr4 (104-156)||(15547068-15547120)
chr4 (104-156)||(19127951-19128003)
chr4 (104-158)||(10783899-10783953)
chr4 (104-173)||(1650673-1650742)
chr4 (188-236)||(14158177-14158225)
chr4 (104-156)||(49051469-49051521)
chr4 (188-235)||(14164862-14164909)
chr4 (121-156)||(43284530-43284565)
chr4 (104-156)||(2972341-2972393)
chr4 (104-156)||(13454239-13454291)
chr4 (104-156)||(14487104-14487155)
chr4 (104-156)||(15325383-15325434)
chr4 (104-156)||(16999776-16999828)
chr4 (104-156)||(46044478-46044530)
chr4 (104-156)||(47870647-47870699)
[»] chr2 (35 HSPs)
chr2 (2-237)||(23375357-23375591)
chr2 (6-237)||(24160706-24160937)
chr2 (33-237)||(40261739-40261942)
chr2 (3-235)||(25651666-25651897)
chr2 (6-174)||(23085902-23086070)
chr2 (1-156)||(24669338-24669493)
chr2 (104-233)||(22841406-22841525)
chr2 (104-156)||(19035991-19036043)
chr2 (104-156)||(21121238-21121290)
chr2 (104-156)||(23149118-23149170)
chr2 (104-156)||(23560908-23560960)
chr2 (104-156)||(25267712-25267764)
chr2 (104-153)||(23291437-23291486)
chr2 (104-156)||(17634402-17634454)
chr2 (104-156)||(23753299-23753351)
chr2 (104-156)||(25174379-25174431)
chr2 (104-156)||(25365537-25365589)
chr2 (109-156)||(32911100-32911147)
chr2 (104-154)||(24943888-24943938)
chr2 (104-153)||(20913949-20913998)
chr2 (6-63)||(22790644-22790701)
chr2 (104-153)||(24652828-24652877)
chr2 (104-156)||(2106082-2106134)
chr2 (104-156)||(8889583-8889635)
chr2 (104-156)||(20648584-20648636)
chr2 (104-156)||(20724521-20724573)
chr2 (104-156)||(24659269-24659321)
chr2 (104-156)||(25107083-25107135)
chr2 (198-237)||(23085860-23085899)
chr2 (104-156)||(19703097-19703149)
chr2 (104-156)||(22810385-22810437)
chr2 (105-156)||(14564302-14564353)
chr2 (104-156)||(19649159-19649211)
chr2 (104-156)||(27272625-27272677)
chr2 (133-173)||(28970910-28970950)
[»] chr1 (46 HSPs)
chr1 (2-237)||(28204105-28204340)
chr1 (2-235)||(20901575-20901807)
chr1 (6-125)||(14800939-14801058)
chr1 (6-125)||(14809813-14809932)
chr1 (3-174)||(21527161-21527332)
chr1 (3-176)||(8685740-8685914)
chr1 (104-176)||(8683554-8683627)
chr1 (104-156)||(21734035-21734087)
chr1 (1-156)||(24475850-24476005)
chr1 (4-236)||(25091798-25092020)
chr1 (104-156)||(15316120-15316172)
chr1 (104-156)||(21410292-21410344)
chr1 (114-173)||(3706393-3706452)
chr1 (104-166)||(23631456-23631518)
chr1 (104-153)||(41312659-41312708)
chr1 (104-156)||(5381139-5381191)
chr1 (104-156)||(19853530-19853582)
chr1 (104-156)||(19859665-19859717)
chr1 (104-156)||(21732984-21733036)
chr1 (104-156)||(21986517-21986569)
chr1 (104-156)||(22434570-22434622)
chr1 (104-156)||(23712704-23712756)
chr1 (104-156)||(24238023-24238075)
chr1 (104-167)||(20837818-20837881)
chr1 (105-156)||(21745217-21745268)
chr1 (107-156)||(31926933-31926982)
chr1 (104-156)||(954705-954757)
chr1 (104-156)||(19666345-19666397)
chr1 (104-156)||(20595728-20595780)
chr1 (104-156)||(20849535-20849587)
chr1 (104-152)||(21698609-21698657)
chr1 (109-156)||(16883173-16883220)
chr1 (104-173)||(20941474-20941543)
chr1 (104-156)||(20243051-20243103)
chr1 (104-156)||(21664674-21664726)
chr1 (104-156)||(30491054-30491106)
chr1 (104-156)||(36917589-36917641)
chr1 (114-173)||(20823989-20824048)
chr1 (109-156)||(29554069-29554116)
chr1 (104-155)||(29601881-29601932)
chr1 (113-156)||(43088851-43088894)
chr1 (104-142)||(19336297-19336335)
chr1 (106-156)||(36615395-36615445)
chr1 (104-156)||(21921270-21921322)
chr1 (104-156)||(24108626-24108678)
chr1 (104-156)||(49328504-49328556)
[»] scaffold0058 (2 HSPs)
scaffold0058 (1-166)||(67692-67857)
scaffold0058 (104-173)||(17973-18042)
[»] scaffold0034 (3 HSPs)
scaffold0034 (2-237)||(34284-34518)
scaffold0034 (104-156)||(45-97)
scaffold0034 (104-154)||(6204-6254)
[»] chr6 (37 HSPs)
chr6 (2-235)||(23620603-23620835)
chr6 (6-234)||(17526749-17526977)
chr6 (3-156)||(18138068-18138221)
chr6 (106-236)||(9185447-9185566)
chr6 (104-156)||(19468333-19468385)
chr6 (114-173)||(1593249-1593308)
chr6 (104-153)||(19819409-19819458)
chr6 (104-156)||(14615899-14615951)
chr6 (104-156)||(19451784-19451836)
chr6 (104-156)||(22798135-22798187)
chr6 (104-156)||(23105702-23105754)
chr6 (104-159)||(18786579-18786634)
chr6 (114-173)||(21724377-21724436)
chr6 (105-156)||(24721108-24721159)
chr6 (105-158)||(17414503-17414556)
chr6 (67-156)||(21476796-21476885)
chr6 (104-156)||(18315593-18315645)
chr6 (104-156)||(19588198-19588250)
chr6 (104-156)||(22907469-22907521)
chr6 (104-156)||(26418278-26418330)
chr6 (109-156)||(14374942-14374989)
chr6 (109-156)||(23233035-23233082)
chr6 (104-156)||(933903-933955)
chr6 (104-156)||(13940905-13940956)
chr6 (104-156)||(19727121-19727173)
chr6 (104-156)||(21470295-21470347)
chr6 (104-156)||(23234542-23234594)
chr6 (104-156)||(27767832-27767884)
chr6 (110-153)||(2708882-2708925)
chr6 (187-236)||(21470225-21470274)
chr6 (67-156)||(25773183-25773271)
chr6 (104-173)||(28289814-28289882)
chr6 (104-141)||(28359463-28359500)
chr6 (77-125)||(1584793-1584841)
chr6 (104-156)||(12446827-12446879)
chr6 (104-156)||(13127907-13127959)
chr6 (104-156)||(17207369-17207421)
[»] chr3 (50 HSPs)
chr3 (1-225)||(30205988-30206212)
chr3 (6-212)||(11325409-11325615)
chr3 (7-235)||(15232642-15232860)
chr3 (7-235)||(15238510-15238728)
chr3 (104-156)||(24284046-24284098)
chr3 (104-166)||(15954578-15954640)
chr3 (104-156)||(12153363-12153415)
chr3 (104-156)||(12363881-12363933)
chr3 (104-152)||(13036600-13036648)
chr3 (104-156)||(15011535-15011587)
chr3 (104-156)||(16823426-16823478)
chr3 (104-156)||(17496634-17496686)
chr3 (104-156)||(42109693-42109745)
chr3 (3-165)||(12855374-12855536)
chr3 (104-173)||(10597296-10597365)
chr3 (104-156)||(2269877-2269929)
chr3 (104-156)||(11305386-11305438)
chr3 (104-156)||(11644433-11644485)
chr3 (104-156)||(11939528-11939580)
chr3 (104-156)||(12355598-12355650)
chr3 (104-156)||(12362147-12362199)
chr3 (104-156)||(13692436-13692488)
chr3 (104-156)||(18128186-18128238)
chr3 (105-156)||(15934574-15934625)
chr3 (104-154)||(14288656-14288706)
chr3 (104-158)||(17198665-17198719)
chr3 (104-173)||(16829586-16829655)
chr3 (104-173)||(16838109-16838178)
chr3 (104-156)||(11964554-11964606)
chr3 (104-156)||(12479322-12479374)
chr3 (104-156)||(14293218-14293270)
chr3 (104-156)||(14298845-14298897)
chr3 (112-156)||(15518971-15519015)
chr3 (104-156)||(18135956-18136008)
chr3 (104-156)||(18718763-18718815)
chr3 (105-156)||(12274764-12274815)
chr3 (110-156)||(12202791-12202837)
chr3 (111-156)||(12961024-12961069)
chr3 (104-156)||(12255633-12255685)
chr3 (104-156)||(12256078-12256130)
chr3 (104-156)||(14652357-14652409)
chr3 (104-156)||(18961416-18961468)
chr3 (104-156)||(35985195-35985247)
chr3 (104-156)||(49163622-49163674)
chr3 (104-166)||(16349079-16349140)
chr3 (104-154)||(20376883-20376933)
chr3 (104-173)||(16382523-16382591)
chr3 (104-152)||(12419919-12419967)
chr3 (104-156)||(15375100-15375152)
chr3 (104-156)||(46070752-46070804)
[»] scaffold0388 (1 HSPs)
scaffold0388 (6-237)||(15488-15719)
[»] scaffold0860 (1 HSPs)
scaffold0860 (6-235)||(710-938)
[»] chr5 (34 HSPs)
chr5 (6-237)||(21980407-21980638)
chr5 (6-177)||(21553773-21553944)
chr5 (3-235)||(7785622-7785853)
chr5 (104-235)||(26706822-26706943)
chr5 (104-235)||(26976556-26976677)
chr5 (102-166)||(15193613-15193677)
chr5 (104-156)||(18819417-18819469)
chr5 (104-156)||(21901476-21901528)
chr5 (104-173)||(22232334-22232403)
chr5 (104-173)||(22237487-22237556)
chr5 (104-156)||(427699-427751)
chr5 (109-173)||(757917-757981)
chr5 (104-156)||(21495375-21495427)
chr5 (104-156)||(21889064-21889116)
chr5 (104-156)||(23443797-23443849)
chr5 (105-156)||(23561209-23561260)
chr5 (106-156)||(20843544-20843594)
chr5 (84-158)||(22500166-22500240)
chr5 (104-156)||(17022394-17022446)
chr5 (104-156)||(21830015-21830067)
chr5 (104-156)||(22379954-22380006)
chr5 (107-155)||(25014066-25014114)
chr5 (104-156)||(6404113-6404165)
chr5 (104-158)||(27635489-27635543)
chr5 (104-156)||(10035625-10035678)
chr5 (104-153)||(20938112-20938161)
chr5 (113-156)||(19801540-19801583)
chr5 (104-165)||(20990763-20990824)
chr5 (104-156)||(5337989-5338041)
chr5 (124-156)||(22312462-22312494)
chr5 (104-156)||(23075927-23075979)
chr5 (104-156)||(24058066-24058118)
chr5 (104-156)||(25420292-25420344)
chr5 (104-156)||(39608508-39608560)
[»] scaffold0500 (1 HSPs)
scaffold0500 (2-235)||(11088-11319)
[»] scaffold0556 (2 HSPs)
scaffold0556 (77-237)||(10094-10253)
scaffold0556 (104-156)||(4622-4674)
[»] scaffold0371 (2 HSPs)
scaffold0371 (6-237)||(7961-8192)
scaffold0371 (33-166)||(6549-6682)
[»] scaffold0609 (1 HSPs)
scaffold0609 (6-235)||(4914-5142)
[»] scaffold0234 (2 HSPs)
scaffold0234 (6-170)||(26346-26510)
scaffold0234 (198-237)||(26517-26556)
[»] scaffold0090 (1 HSPs)
scaffold0090 (3-235)||(31810-32044)
[»] scaffold0016 (1 HSPs)
scaffold0016 (67-237)||(182487-182657)
[»] scaffold0014 (1 HSPs)
scaffold0014 (6-234)||(189193-189421)
[»] scaffold0381 (1 HSPs)
scaffold0381 (88-235)||(13471-13617)
[»] scaffold0130 (1 HSPs)
scaffold0130 (3-235)||(2221-2452)
[»] scaffold0009 (1 HSPs)
scaffold0009 (118-237)||(159627-159746)
[»] scaffold0696 (1 HSPs)
scaffold0696 (3-176)||(3045-3219)
[»] scaffold0069 (2 HSPs)
scaffold0069 (3-176)||(35008-35182)
scaffold0069 (3-174)||(29758-29930)
[»] scaffold0001 (3 HSPs)
scaffold0001 (33-156)||(449214-449337)
scaffold0001 (104-154)||(96358-96408)
scaffold0001 (113-156)||(179463-179506)
[»] scaffold1765 (1 HSPs)
scaffold1765 (3-156)||(50-203)
[»] scaffold0485 (1 HSPs)
scaffold0485 (104-235)||(3207-3328)
[»] scaffold0480 (1 HSPs)
scaffold0480 (3-156)||(989-1142)
[»] scaffold0395 (1 HSPs)
scaffold0395 (3-176)||(6955-7128)
[»] scaffold0011 (8 HSPs)
scaffold0011 (104-176)||(21279-21352)
scaffold0011 (104-156)||(56392-56444)
scaffold0011 (104-156)||(147453-147505)
scaffold0011 (104-156)||(154640-154692)
scaffold0011 (104-156)||(252393-252445)
scaffold0011 (104-156)||(258999-259051)
scaffold0011 (104-155)||(187452-187503)
scaffold0011 (104-155)||(197079-197130)
[»] scaffold0180 (1 HSPs)
scaffold0180 (104-156)||(12935-12987)
[»] scaffold0005 (3 HSPs)
scaffold0005 (114-173)||(259171-259230)
scaffold0005 (114-173)||(265586-265645)
scaffold0005 (104-156)||(17791-17843)
[»] scaffold2016 (1 HSPs)
scaffold2016 (104-166)||(479-541)
[»] scaffold0298 (2 HSPs)
scaffold0298 (102-156)||(8750-8804)
scaffold0298 (102-156)||(18834-18888)
[»] scaffold0008 (2 HSPs)
scaffold0008 (104-166)||(124544-124606)
scaffold0008 (104-158)||(35285-35339)
[»] scaffold1853 (1 HSPs)
scaffold1853 (104-156)||(468-520)
[»] scaffold0751 (1 HSPs)
scaffold0751 (104-156)||(913-965)
[»] scaffold0661 (1 HSPs)
scaffold0661 (104-156)||(3680-3732)
[»] scaffold0331 (1 HSPs)
scaffold0331 (104-156)||(19005-19057)
[»] scaffold0301 (2 HSPs)
scaffold0301 (104-156)||(3718-3770)
scaffold0301 (109-156)||(13036-13083)
[»] scaffold0244 (2 HSPs)
scaffold0244 (104-156)||(14110-14162)
scaffold0244 (104-156)||(300-352)
[»] scaffold0139 (2 HSPs)
scaffold0139 (104-156)||(26387-26439)
scaffold0139 (104-156)||(2538-2590)
[»] scaffold0108 (1 HSPs)
scaffold0108 (104-156)||(46013-46065)
[»] scaffold0091 (2 HSPs)
scaffold0091 (104-156)||(22362-22414)
scaffold0091 (104-156)||(26559-26611)
[»] scaffold0054 (2 HSPs)
scaffold0054 (104-156)||(61633-61685)
scaffold0054 (105-156)||(60070-60121)
[»] scaffold0039 (1 HSPs)
scaffold0039 (104-156)||(3400-3452)
[»] scaffold0035 (2 HSPs)
scaffold0035 (104-156)||(1041-1093)
scaffold0035 (104-156)||(10952-11003)
[»] scaffold0434 (1 HSPs)
scaffold0434 (105-156)||(968-1019)
[»] scaffold0156 (1 HSPs)
scaffold0156 (105-156)||(26096-26147)
[»] scaffold0021 (1 HSPs)
scaffold0021 (114-173)||(141823-141882)
[»] scaffold0664 (1 HSPs)
scaffold0664 (104-158)||(2637-2691)
[»] scaffold0326 (1 HSPs)
scaffold0326 (106-156)||(5008-5058)
[»] scaffold0081 (1 HSPs)
scaffold0081 (106-156)||(55562-55612)
[»] scaffold0053 (1 HSPs)
scaffold0053 (106-156)||(72518-72568)
[»] scaffold0003 (3 HSPs)
scaffold0003 (34-156)||(80713-80835)
scaffold0003 (104-156)||(98090-98142)
scaffold0003 (104-156)||(161128-161180)
[»] scaffold0025 (2 HSPs)
scaffold0025 (104-173)||(71580-71649)
scaffold0025 (105-156)||(77228-77279)
[»] scaffold1336 (1 HSPs)
scaffold1336 (104-156)||(371-423)
[»] scaffold0790 (1 HSPs)
scaffold0790 (104-156)||(4978-5030)
[»] scaffold0706 (1 HSPs)
scaffold0706 (104-156)||(2965-3017)
[»] scaffold0585 (1 HSPs)
scaffold0585 (3-166)||(8000-8164)
[»] scaffold0462 (1 HSPs)
scaffold0462 (104-156)||(8846-8898)
[»] scaffold0405 (2 HSPs)
scaffold0405 (104-156)||(2930-2982)
scaffold0405 (104-156)||(11632-11684)
[»] scaffold0266 (2 HSPs)
scaffold0266 (104-156)||(2424-2476)
scaffold0266 (104-156)||(23503-23555)
[»] scaffold0253 (1 HSPs)
scaffold0253 (104-156)||(5770-5822)
[»] scaffold0207 (1 HSPs)
scaffold0207 (4-156)||(9176-9328)
[»] scaffold0205 (1 HSPs)
scaffold0205 (104-156)||(27748-27800)
[»] scaffold0201 (1 HSPs)
scaffold0201 (104-156)||(26805-26857)
[»] scaffold0192 (3 HSPs)
scaffold0192 (4-156)||(21351-21503)
scaffold0192 (104-156)||(32018-32070)
scaffold0192 (110-156)||(7099-7145)
[»] scaffold0190 (1 HSPs)
scaffold0190 (104-156)||(19755-19807)
[»] scaffold0173 (1 HSPs)
scaffold0173 (104-156)||(1851-1903)
[»] scaffold0167 (1 HSPs)
scaffold0167 (104-156)||(7427-7479)
[»] scaffold0124 (2 HSPs)
scaffold0124 (104-156)||(9738-9790)
scaffold0124 (104-156)||(45409-45461)
[»] scaffold0121 (1 HSPs)
scaffold0121 (104-156)||(9751-9803)
[»] scaffold0114 (2 HSPs)
scaffold0114 (104-156)||(47477-47529)
scaffold0114 (104-156)||(42438-42490)
[»] scaffold0102 (3 HSPs)
scaffold0102 (104-156)||(30317-30369)
scaffold0102 (104-156)||(38911-38963)
scaffold0102 (104-156)||(44982-45034)
[»] scaffold0096 (1 HSPs)
scaffold0096 (104-156)||(3382-3434)
[»] scaffold0028 (2 HSPs)
scaffold0028 (104-156)||(92215-92267)
scaffold0028 (168-237)||(88215-88284)
[»] scaffold0017 (1 HSPs)
scaffold0017 (104-156)||(2581-2633)
[»] scaffold0007 (1 HSPs)
scaffold0007 (104-156)||(207348-207400)
[»] scaffold0924 (1 HSPs)
scaffold0924 (33-156)||(2749-2872)
[»] scaffold0023 (2 HSPs)
scaffold0023 (109-156)||(152973-153020)
scaffold0023 (104-156)||(20125-20177)
[»] scaffold1290 (1 HSPs)
scaffold1290 (104-154)||(885-935)
[»] scaffold0923 (1 HSPs)
scaffold0923 (106-156)||(334-384)
[»] scaffold0377 (2 HSPs)
scaffold0377 (104-157)||(3699-3752)
scaffold0377 (104-157)||(7738-7791)
[»] scaffold0342 (1 HSPs)
scaffold0342 (104-173)||(16496-16565)
[»] scaffold0126 (1 HSPs)
scaffold0126 (104-173)||(44683-44752)
[»] scaffold0026 (2 HSPs)
scaffold0026 (104-153)||(143174-143223)
scaffold0026 (104-156)||(62831-62883)
[»] scaffold0015 (1 HSPs)
scaffold0015 (111-156)||(171435-171480)
[»] scaffold0555 (1 HSPs)
scaffold0555 (104-148)||(1894-1938)
[»] scaffold0516 (1 HSPs)
scaffold0516 (104-156)||(6658-6710)
[»] scaffold0334 (1 HSPs)
scaffold0334 (104-156)||(8956-9008)
[»] scaffold0261 (1 HSPs)
scaffold0261 (104-152)||(8893-8941)
[»] scaffold0243 (1 HSPs)
scaffold0243 (104-156)||(11950-12002)
[»] scaffold0239 (1 HSPs)
scaffold0239 (104-156)||(14106-14158)
[»] scaffold0178 (1 HSPs)
scaffold0178 (104-156)||(25942-25994)
[»] scaffold0120 (1 HSPs)
scaffold0120 (104-156)||(4678-4730)
[»] scaffold0106 (2 HSPs)
scaffold0106 (104-156)||(46376-46428)
scaffold0106 (104-156)||(50649-50701)
[»] scaffold0097 (1 HSPs)
scaffold0097 (104-156)||(28350-28402)
[»] scaffold0078 (1 HSPs)
scaffold0078 (104-156)||(17053-17105)
[»] scaffold0074 (1 HSPs)
scaffold0074 (104-156)||(20680-20732)
[»] scaffold0072 (1 HSPs)
scaffold0072 (104-156)||(56371-56423)
[»] scaffold0071 (1 HSPs)
scaffold0071 (104-156)||(50579-50631)
[»] scaffold0022 (2 HSPs)
scaffold0022 (104-156)||(38284-38336)
scaffold0022 (104-156)||(136344-136396)
[»] scaffold0010 (2 HSPs)
scaffold0010 (109-156)||(43738-43785)
scaffold0010 (109-156)||(48804-48851)
[»] scaffold0430 (1 HSPs)
scaffold0430 (115-173)||(14192-14250)
[»] scaffold0076 (1 HSPs)
scaffold0076 (104-173)||(51316-51386)
[»] scaffold0669 (1 HSPs)
scaffold0669 (42-155)||(1273-1386)
[»] scaffold0211 (1 HSPs)
scaffold0211 (107-156)||(9842-9891)
[»] scaffold0104 (1 HSPs)
scaffold0104 (104-156)||(41274-41327)
[»] scaffold0065 (1 HSPs)
scaffold0065 (104-173)||(27383-27452)
[»] scaffold1584 (1 HSPs)
scaffold1584 (104-156)||(830-882)
[»] scaffold0574 (1 HSPs)
scaffold0574 (104-156)||(5518-5570)
[»] scaffold0348 (1 HSPs)
scaffold0348 (104-156)||(15122-15174)
[»] scaffold0220 (1 HSPs)
scaffold0220 (104-156)||(10868-10920)
[»] scaffold0049 (2 HSPs)
scaffold0049 (104-156)||(42551-42603)
scaffold0049 (104-156)||(53246-53298)
[»] scaffold0002 (1 HSPs)
scaffold0002 (104-156)||(370885-370937)
[»] scaffold0063 (2 HSPs)
scaffold0063 (105-156)||(24726-24777)
scaffold0063 (106-156)||(14525-14575)
[»] scaffold0402 (1 HSPs)
scaffold0402 (104-142)||(15456-15494)
[»] scaffold0037 (1 HSPs)
scaffold0037 (104-154)||(101300-101350)
[»] scaffold0947 (1 HSPs)
scaffold0947 (104-145)||(3787-3828)
[»] scaffold0323 (1 HSPs)
scaffold0323 (104-173)||(7740-7809)
[»] scaffold0297 (1 HSPs)
scaffold0297 (104-156)||(1386-1438)
[»] scaffold0249 (1 HSPs)
scaffold0249 (104-156)||(6397-6449)
[»] scaffold0158 (1 HSPs)
scaffold0158 (104-156)||(14904-14956)
[»] scaffold0060 (1 HSPs)
scaffold0060 (104-156)||(41703-41755)


Alignment Details
Target: chr7 (Bit Score: 157; Significance: 1e-83; HSPs: 61)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 13849285 - 13849521
Alignment:
Q  1 cttgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaa 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |  | ||| | |||||||||  ||||| ||||||||||||| | |    
T  13849285 cttgatttttaaaatgttgttttaggtcgtatgttggatggttttgagtgcctggatgtttatggagaggactggttaagtttttagatcaaaaagagga 13849384  T
Q  101 ttggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcg 200  Q
    || ||||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||| ||||||    
T  13849385 ttagggagcttaaaaatgaggatttagtaagaaaaatgtcaaaactctcgagagcagcaattttctgctcgccacggcgaacgacttactcgccatagcg 13849484  T
Q  201 agtagcccatttccttgagctcgccatagcgagcagt 237  Q
    ||||||||||||| |||||||||||||||||||||||    
T  13849485 agtagcccatttcattgagctcgccatagcgagcagt 13849521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 16573918 - 16573682
Alignment:
Q  1 cttgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaa 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |  | ||| | ||||||||| |||||| |||||| |||||| | |    
T  16573918 cttgatttttaaaatgttgttttaggtcgtatgttggatggttttgagtgcctggatgtttatggagaggactggtcaagtttttagataaaaaagagga 16573819  T
Q  101 ttggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcg 200  Q
    || ||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||||| |||||||||  ||| || |||||||| ||||||    
T  16573818 ttagggagcttaaaaatgaggatttagtaagaaaaatgtcaaaactcccgagagcaacaattttctactcgccacgacgaatgacttactcgccatagcg 16573719  T
Q  201 agtagcccatttccttgagctcgccatagcgagcagt 237  Q
    |||||||||||||||||||||||||||||||||||||    
T  16573718 agtagcccatttccttgagctcgccatagcgagcagt 16573682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 16591744 - 16591980
Alignment:
Q  1 cttgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaa 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |  | ||| | ||||||||| |||||| |||||| |||||| | |    
T  16591744 cttgatttttaaaatgttgttttaggtcgtatgttggatggttttgagtgcctggatgtttatggagaggactggtcaagtttttagataaaaaagagga 16591843  T
Q  101 ttggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcg 200  Q
    || ||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||||| |||||||||  ||| || |||||||| ||||||    
T  16591844 ttagggagcttaaaaatgaggatttagtaagaaaaatgtcaaaactcccgagagcaacaattttctactcgccacgacgaatgacttactcgccatagcg 16591943  T
Q  201 agtagcccatttccttgagctcgccatagcgagcagt 237  Q
    |||||||||||||||||||||||||||||||||||||    
T  16591944 agtagcccatttccttgagctcgccatagcgagcagt 16591980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 6 - 237
Target Start/End: Complemental strand, 7529797 - 7529566
Alignment:
Q  6 tttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggg 105  Q
    |||| ||||||||||| || | |||  ||||||| ||||||||||| || |  | | ||| |||||||||||||||| ||||||||||||| | ||| ||    
T  7529797 ttttcaaaatgttgttatatgacgtgagttggatggttttgagtgcttggatgtttttagagaggactgggcaagtttttagatcaaaaagaggattagg 7529698  T
Q  106 gagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcgagtag 205  Q
    |||||||||||||| ||||||| ||||||||||||||||||||| |||||| || |||||||||||||||| ||||| | |||||||| |||||||||||    
T  7529697 gagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccaagagcaccatttttctgctcgccacgctgaacaacttactcgccatagcgagtag 7529598  T
Q  206 cccatttccttgagctcgccatagcgagcagt 237  Q
    ||| ||| ||  ||||||||||||||||||||    
T  7529597 ccctttttctgaagctcgccatagcgagcagt 7529566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 6 - 236
Target Start/End: Original strand, 39995221 - 39995452
Alignment:
Q  6 tttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggg 105  Q
    |||||||||||||||| ||||  ||  ||||||| ||||||| |||||| |  | | ||| |||||||| |||| || |||||| ||||||   ||| ||    
T  39995221 tttttaaaatgttgttataggatgtgagttggatggttttgactgcctggatgtttctagagaggactgagcaaatttttagataaaaaagatgattagg 39995320  T
Q  106 gagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagca-attttctgctcgccacggtgaacgaattactcgctatagcgagta 204  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||||||||  |  |||||||||||| |||| |||| | |||||||| | ||||||||    
T  39995321 gagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcactattttttctgctcgcgacggcgaacaacttactcgccagagcgagta 39995420  T
Q  205 gcccatttccttgagctcgccatagcgagcag 236  Q
    ||||||||  ||||||||||||||||||||||    
T  39995421 gcccattttattgagctcgccatagcgagcag 39995452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 7 - 235
Target Start/End: Original strand, 12208074 - 12208292
Alignment:
Q  7 ttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattgggg 106  Q
    ||||||| ||||||| || | |||| ||||||| |||||||||||||| |  | | ||| ||||||||||  | || | |||| ||||||   ||| |||    
T  12208074 ttttaaattgttgttataagacgtaagttggatggttttgagtgcctggatgtttttagagaggactggggcaattttcagattaaaaagatgattaggg 12208173  T
Q  107 agcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttc-tgctcgccacggtgaacgaattactcgctatagcgagtag 205  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||||| || ||||| |||||||||||          ||||||| |||||||||||    
T  12208174 agcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcaccatttttcttgctcgccacg----------tactcgccatagcgagtag 12208263  T
Q  206 cccatttccttgagctcgccatagcgagca 235  Q
    | ||||| |||||| |||||||||||||||    
T  12208264 ctcattt-cttgagttcgccatagcgagca 12208292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 11 - 174
Target Start/End: Original strand, 7506913 - 7507078
Alignment:
Q  11 aaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaa--ttggggag 108  Q
    ||||||| ||| |||| |||  ||||||| | |||| ||||||||| || ||| | |||||||||||||||| || ||| |||||   ||  || |||||    
T  7506913 aaaatgtcgttataggacgtgggttggatgggtttgggtgcctgaatatatatggagaggactgggcaagtttttggataaaaaacaaaagattagggag 7507012  T
Q  109 cttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcca 174  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||| | |||| ||||||||||    
T  7507013 cttaaaaatgaggatttagtgtgaaaaatgtcaaaactcccgagagcaactatttcctgctcgcca 7507078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 7 - 176
Target Start/End: Original strand, 12201469 - 12201639
Alignment:
Q  7 ttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattgggg 106  Q
    ||||||| ||||||| || |  ||| ||||||| |||||||||||||| |  | | ||| ||||||||||  | || | |||| ||||||   |||||||    
T  12201469 ttttaaattgttgttataagatgtaagttggatggttttgagtgcctggatgtttttagagaggactggggcaattttcagattaaaaagatgattgggg 12201568  T
Q  107 agcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttc-tgctcgccacg 176  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||||| || ||||| |||||||||||    
T  12201569 agcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcaccatttttcttgctcgccacg 12201639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 33 - 156
Target Start/End: Complemental strand, 14039293 - 14039170
Alignment:
Q  33 gttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggggagcttaaaaatgaggatttagggaga 132  Q
    ||||||| |||||||||||| |||  | | ||| ||||||||||  | || |||||| ||||||  |||| || ||||||||||||| ||||||| ||||    
T  14039293 gttggatagttttgagtgcccgaatgtttttagagaggactgggataatttttagattaaaaagataattaggaagcttaaaaatgaagatttagtgaga 14039194  T
Q  133 aaaatgtcaaaactcccgagagca 156  Q
    ||||||||||||||||||||||||    
T  14039193 aaaatgtcaaaactcccgagagca 14039170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 33 - 156
Target Start/End: Complemental strand, 14349323 - 14349200
Alignment:
Q  33 gttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggggagcttaaaaatgaggatttagggaga 132  Q
    ||||||| |||||||||||| |||  | | ||| ||||||||||  | || |||||| ||||||  |||| || ||||||||||||| ||||||| ||||    
T  14349323 gttggatagttttgagtgcccgaatgtttttagagaggactgggataatttttagattaaaaagataattaggaagcttaaaaatgaagatttagtgaga 14349224  T
Q  133 aaaatgtcaaaactcccgagagca 156  Q
    ||||||||||||||||||||||||    
T  14349223 aaaatgtcaaaactcccgagagca 14349200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 98 - 156
Target Start/End: Original strand, 15103949 - 15104007
Alignment:
Q  98 gaattggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  15103949 gaataggggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 15104007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 104 - 236
Target Start/End: Complemental strand, 15690508 - 15690386
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaatttt-ctgctcgccacggtgaacgaattactcgctatagcgag 202  Q
    |||||||||||||||| ||||||| ||||||||||||||||||| |||||||| || |||| ||||||||||||          ||||||| ||||||||    
T  15690508 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactctcgagagcaccatttttcctgctcgccacg----------tactcgccatagcgag 15690419  T
Q  203 tagcccatttccttgagctcgccatagcgagcag 236  Q
    || | ||||| |||||| ||||||||||||||||    
T  15690418 taactcattt-cttgagttcgccatagcgagcag 15690386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 104 - 236
Target Start/End: Complemental strand, 15698101 - 15697979
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaatttt-ctgctcgccacggtgaacgaattactcgctatagcgag 202  Q
    |||||||||||||||| ||||||| ||||||||||||||||||| |||||||| || |||| ||||||||||||          ||||||| ||||||||    
T  15698101 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactctcgagagcaccatttttcctgctcgccacg----------tactcgccatagcgag 15698012  T
Q  203 tagcccatttccttgagctcgccatagcgagcag 236  Q
    || | ||||| |||||| ||||||||||||||||    
T  15698011 taactcattt-cttgagttcgccatagcgagcag 15697979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 81690 - 81742
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  81690 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 81742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 12800902 - 12800954
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  12800902 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 12800954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 16187342 - 16187394
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  16187342 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 16187394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 16475749 - 16475801
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  16475749 gggagcttaaaaatgaggatttagtgagaaaaatttcaaaactcccgagagca 16475801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 18009853 - 18009801
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  18009853 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 18009801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 23442750 - 23442698
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  23442750 gggagcttaaaaatgaggatttagtgggaaaaatgtcaaaactcccgagagca 23442698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 15339379 - 15339320
Alignment:
Q  114 aaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcc 173  Q
    |||||||||||||| ||||||||||||||||||||||||||||||  ||||||| |||||    
T  15339379 aaatgaggatttagtgagaaaaatgtcaaaactcccgagagcagcctttttctgttcgcc 15339320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 15710618 - 15710677
Alignment:
Q  114 aaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcc 173  Q
    |||||||||||||| ||||||||||||||||||||||||||||||  ||||||| |||||    
T  15710618 aaatgaggatttagtgagaaaaatgtcaaaactcccgagagcagcctttttctgttcgcc 15710677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 41 - 156
Target Start/End: Original strand, 16668012 - 16668127
Alignment:
Q  41 gttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggggagcttaaaaatgaggatttagggagaaaaatgtc 140  Q
    |||||||||| |||||  | | ||| ||||||||||  | || |||||| ||||||   ||| |||| ||||||||||| ||||||| ||||||||||||    
T  16668012 gttttgagtgtctgaatgtttttagagaggactgggacaatttttagattaaaaagatgattagggaacttaaaaatgaagatttagtgagaaaaatgtc 16668111  T
Q  141 aaaactcccgagagca 156  Q
    ||||||||||||||||    
T  16668112 aaaactcccgagagca 16668127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 41 - 156
Target Start/End: Original strand, 17642382 - 17642497
Alignment:
Q  41 gttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggggagcttaaaaatgaggatttagggagaaaaatgtc 140  Q
    |||||||||| |||||  | | ||| ||||||||||  | || |||||| ||||||   ||| |||| ||||||||||| ||||||| ||||||||||||    
T  17642382 gttttgagtgtctgaatgtttttagagaggactgggacaatttttagattaaaaagatgattagggaacttaaaaatgaagatttagtgagaaaaatgtc 17642481  T
Q  141 aaaactcccgagagca 156  Q
    ||||||||||||||||    
T  17642482 aaaactcccgagagca 17642497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 105 - 156
Target Start/End: Original strand, 46681807 - 46681858
Alignment:
Q  105 ggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  46681807 ggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 46681858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 14250147 - 14250209
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttct 166  Q
    |||||||||||||||| | ||||| |||||||||||||||||||||||||||| || ||||||    
T  14250147 gggagcttaaaaatgaagttttagtgagaaaaatgtcaaaactcccgagagcaccatttttct 14250209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 106 - 155
Target Start/End: Complemental strand, 12554999 - 12554950
Alignment:
Q  106 gagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagc 155  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  12554999 gagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagc 12554950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 13318247 - 13318195
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| | ||||| ||||||||||||||||||||||||||||    
T  13318247 gggagcttaaaaatgaagttttagtgagaaaaatgtcaaaactcccgagagca 13318195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 14169144 - 14169196
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||| ||||||| ||||||| ||||||||||||||||||||||||||||    
T  14169144 gggagcttcaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 14169196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 14173391 - 14173443
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||| ||||||| ||||||| ||||||||||||||||||||||||||||    
T  14173391 gggagcttcaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 14173443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 14581171 - 14581223
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||| ||||||    
T  14581171 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactccctagagca 14581223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 15097578 - 15097630
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||| ||||||||| ||||||| ||||||||||||||||||||||||||||    
T  15097578 gggagcctaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 15097630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 15437183 - 15437235
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||| ||||||||||||||    
T  15437183 gggagcttaaaaatgaagatttagtgagaaaaatgtcagaactcccgagagca 15437235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 16073583 - 16073635
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| |||||||  |||||||||||||||||||||||||||    
T  16073583 gggagcttaaaaatgaagatttagtaagaaaaatgtcaaaactcccgagagca 16073635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 46348366 - 46348418
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  46348366 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 46348418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 109 - 156
Target Start/End: Complemental strand, 3328348 - 3328301
Alignment:
Q  109 cttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  3328348 cttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 3328301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 109 - 156
Target Start/End: Complemental strand, 12695146 - 12695099
Alignment:
Q  109 cttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  12695146 cttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 12695099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 106 - 176
Target Start/End: Original strand, 21518787 - 21518858
Alignment:
Q  106 gagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttc-tgctcgccacg 176  Q
    |||||||||| ||| ||||||| |||||||||||||||||||| ||||||| || ||||| |||||||||||    
T  21518787 gagcttaaaattgaagatttagtgagaaaaatgtcaaaactcctgagagcaccatttttcttgctcgccacg 21518858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 104 - 154
Target Start/End: Complemental strand, 45185998 - 45185948
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagag 154  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||    
T  45185998 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagag 45185948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 173
Target Start/End: Complemental strand, 6412391 - 6412322
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcc 173  Q
    ||||||||| || ||| ||||||| |||||||||||||||||||| |||||||||  ||||||| |||||    
T  6412391 gggagcttagaattgaagatttagtgagaaaaatgtcaaaactcctgagagcagcttttttctgttcgcc 6412322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 11857316 - 11857368
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| |||||||||||||||||| | |||||||    
T  11857316 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaacttctgagagca 11857368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 109 - 153
Target Start/End: Complemental strand, 13020226 - 13020182
Alignment:
Q  109 cttaaaaatgaggatttagggagaaaaatgtcaaaactcccgaga 153  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||    
T  13020226 cttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgaga 13020182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 14265615 - 14265667
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| |  |||| ||||||||||||||||||||||||||||    
T  14265615 gggagcttaaaaatgaagtattagtgagaaaaatgtcaaaactcccgagagca 14265667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 15722825 - 15722877
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| ||||||| ||||||||||||||||||||||||||||    
T  15722825 gggagcttagaattgatgatttagtgagaaaaatgtcaaaactcccgagagca 15722877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 17182324 - 17182376
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| ||||||| ||||||||||||||||||||||||||||    
T  17182324 gggagcttagaattgatgatttagtgagaaaaatgtcaaaactcccgagagca 17182376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 19146123 - 19146071
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| | | ||| ||||||||||||||||||||||||||||    
T  19146123 gggagcttaaaaatgaagttctagtgagaaaaatgtcaaaactcccgagagca 19146071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 19600412 - 19600360
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| ||||||| ||||||||||||||||||||||||||||    
T  19600412 gggagcttagaattgatgatttagtgagaaaaatgtcaaaactcccgagagca 19600360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 20745522 - 20745470
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| | | ||| ||||||||||||||||||||||||||||    
T  20745522 gggagcttaaaaatgaagttctagtgagaaaaatgtcaaaactcccgagagca 20745470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 35962346 - 35962398
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| ||||||| ||||||||||||||||||||||||||||    
T  35962346 gggagcttagaattgatgatttagtgagaaaaatgtcaaaactcccgagagca 35962398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 34 - 156
Target Start/End: Complemental strand, 19152476 - 19152354
Alignment:
Q  34 ttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggggagcttaaaaatgaggatttagggagaa 133  Q
    |||||| ||||||||||||||||  | | ||| ||||||||||  | || |||||| ||||||   | | ||||| |||||||||| | | ||| |||||    
T  19152476 ttggatagttttgagtgcctgaatgtttttagagaggactgggacaatttttagattaaaaagatgaatagggagtttaaaaatgaagttctagtgagaa 19152377  T
Q  134 aaatgtcaaaactcccgagagca 156  Q
    ||||||||||| |||||||||||    
T  19152376 aaatgtcaaaaatcccgagagca 19152354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 34 - 156
Target Start/End: Complemental strand, 20751875 - 20751753
Alignment:
Q  34 ttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggggagcttaaaaatgaggatttagggagaa 133  Q
    |||||| ||||||||||||||||  | | ||| ||||||||||  | || |||||| ||||||   | | ||||| |||||||||| | | ||| |||||    
T  20751875 ttggatagttttgagtgcctgaatgtttttagagaggactgggacaatttttagattaaaaagatgaatagggagtttaaaaatgaagttctagtgagaa 20751776  T
Q  134 aaatgtcaaaactcccgagagca 156  Q
    ||||||||||| |||||||||||    
T  20751775 aaatgtcaaaaatcccgagagca 20751753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 156
Target Start/End: Original strand, 11219736 - 11219781
Alignment:
Q  111 taaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||||  ||||| ||||||||||||||||||||||||||||    
T  11219736 taaaaatgagattttagtgagaaaaatgtcaaaactcccgagagca 11219781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 14281266 - 14281318
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| ||||||  ||||||||||||||||||||||||||||    
T  14281266 gggagcttagaattgatgatttaatgagaaaaatgtcaaaactcccgagagca 14281318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 158
Target Start/End: Original strand, 15085552 - 15085587
Alignment:
Q  123 tttagggagaaaaatgtcaaaactcccgagagcagc 158  Q
    ||||| ||||||||||||||||||||||||||||||    
T  15085552 tttagtgagaaaaatgtcaaaactcccgagagcagc 15085587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 156
Target Start/End: Complemental strand, 10520366 - 10520316
Alignment:
Q  106 gagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||| ||||||| | |||||||||||||| | |||||||||    
T  10520366 gagcttaaaaatgaagatttagtgtgaaaaatgtcaaaaattccgagagca 10520316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 21518684 - 21518734
Alignment:
Q  3 tgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcct 53  Q
    ||||||||||||||||||| || | |||| ||||||| |||||||||||||    
T  21518684 tgatttttaaaatgttgttataaggcgtaagttggatggttttgagtgcct 21518734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 156
Target Start/End: Original strand, 14945501 - 14945534
Alignment:
Q  123 tttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||| ||||||||||||||||||||||||||||    
T  14945501 tttagtgagaaaaatgtcaaaactcccgagagca 14945534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 156
Target Start/End: Original strand, 15373094 - 15373127
Alignment:
Q  123 tttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||| ||||||||||||||||||||||||||||    
T  15373094 tttagtgagaaaaatgtcaaaactcccgagagca 15373127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 156
Target Start/End: Original strand, 37243929 - 37243962
Alignment:
Q  123 tttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||| ||||||||||||||||||||||||||||    
T  37243929 tttagtgagaaaaatgtcaaaactcccgagagca 37243962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 15142763 - 15142711
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||| ||| | ||||| |||||||||||||||||| || ||||||    
T  15142763 gggagcttaaaattgaagttttagtgagaaaaatgtcaaaacttccaagagca 15142711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 125
Target Start/End: Original strand, 15731320 - 15731368
Alignment:
Q  77 caagttgttagatcaaaaagggaattggggagcttaaaaatgaggattt 125  Q
    |||||| || |||||||||||||||| || |||||||||||| ||||||    
T  15731320 caagtttttggatcaaaaagggaattaggaagcttaaaaatggggattt 15731368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 15839128 - 15839076
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| | || || ||||||||||||||||||||||||||||    
T  15839128 gggagcttagaattgaagtttgagtgagaaaaatgtcaaaactcccgagagca 15839076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 149; Significance: 8e-79; HSPs: 4)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 204727 - 204963
Alignment:
Q  1 cttgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaa 100  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||| || |||||||||||||||| || |||||||||||| |    
T  204727 cttgatttttaaaatgttgttttaggtcgtgtgttggatggttttgagtgcctggacatgtacagagaggactgggcaagtttttggatcaaaaagggga 204826  T
Q  101 ttggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcg 200  Q
    ||  ||||||||||||||||||||||| | |||||||||||||||| ||||||||||| ||||| |||||||||||| ||  || |||||||| ||||||    
T  204827 ttaaggagcttaaaaatgaggatttagtgtgaaaaatgtcaaaacttccgagagcagctattttttgctcgccacggcgagtgacttactcgccatagcg 204926  T
Q  201 agtagcccatttccttgagctcgccatagcgagcagt 237  Q
    ||| |||||||| ||||||||||||||||||||||||    
T  204927 agttgcccattttcttgagctcgccatagcgagcagt 204963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 165
Target Start/End: Complemental strand, 384830 - 384669
Alignment:
Q  3 tgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagg-gaat 101  Q
    ||||||| ||| ||||||| || |  ||| ||||||| |||||||||||||| |  | | ||||||||||||||  | || |||||| ||||||  |||     
T  384830 tgattttcaaattgttgttataagatgtaagttggatagttttgagtgcctggatgtttttagggaggactgggacaatttttagattaaaaagatgaaa 384731  T
Q  102 tggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttc 165  Q
      |||||||||||||||| ||||||| |||||||||||||||||||||||||||| || |||||    
T  384730 --gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcaccatttttc 384669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 327312 - 327260
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| | ||||| ||||||||||||||||||||||||||||    
T  327312 gggaacttaaaaatgaagttttagtgagaaaaatgtcaaaactcccgagagca 327260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 321624 - 321572
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| | ||| | |||||||||||||||||| |||||||||    
T  321624 gggaacttaaaaatgaagtttttgtgagaaaaatgtcaaaacttccgagagca 321572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 149; Significance: 8e-79; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 43112702 - 43112466
Alignment:
Q  1 cttgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaa 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||  |  | ||| | ||||||||| |||||| ||||||||||||| | |    
T  43112702 cttgatttttaaaatgttgttttaggtcgtatgttggatggttttgagtgcctagatgtttatggagaggactggtcaagtttttagatcaaaaagagga 43112603  T
Q  101 ttggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcg 200  Q
    || ||||||||| ||||||||||||||  |||||||||||||||||  |||||||||||||||||||||||||||||||||||| |||||||| ||||||    
T  43112602 ttagggagcttagaaatgaggatttagtaagaaaaatgtcaaaactttcgagagcagcaattttctgctcgccacggtgaacgacttactcgccatagcg 43112503  T
Q  201 agtagcccatttccttgagctcgccatagcgagcagt 237  Q
    |||||||||||||| |||||| |||||||||||||||    
T  43112502 agtagcccatttccatgagcttgccatagcgagcagt 43112466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 2 - 235
Target Start/End: Original strand, 15003479 - 15003711
Alignment:
Q  2 ttgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaat 101  Q
    ||||||||||||||||||||||| || ||||||||||| |||||||||||||| |  | ||| | ||||||||  |||||| ||||||||||||| | ||    
T  15003479 ttgatttttaaaatgttgttttaagtagtatgttggatggttttgagtgcctggatgtttatggagaggactgatcaagtttttagatcaaaaagaggat 15003578  T
Q  102 tggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcga 201  Q
    | |||||||||||||||| ||||||| |||||||||||||||||||||||||||| || ||||||||||||||||| |||| | ||| |||| |||||||    
T  15003579 tagggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcaccatttttctgctcgccacggcgaacaacttaatcgccatagcga 15003678  T
Q  202 gtagcccatttccttgagctcgccatagcgagca 235  Q
    |||||| |||| |||||| ||||| |||||||||    
T  15003679 gtagcctattttcttgagttcgcc-tagcgagca 15003711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 12 - 237
Target Start/End: Complemental strand, 20387169 - 20386945
Alignment:
Q  12 aaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggggagctt 111  Q
    |||||||||| |||| |||  ||||||| |||||||||||||  | |||||||| ||||| |||||||||| || |||||||| |||| || ||||||||    
T  20387169 aaatgttgttataggacgtgggttggatggttttgagtgcctagatatgtatagagaggattgggcaagtttttggatcaaaagggga-ttagggagctt 20387071  T
Q  112 aaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcgagtagcccatt 211  Q
    |||||||||||||||| | |||||||||||||||||||||||||||| ||||||||||| |||||| ||  || |||||||| || ||||||||||||||    
T  20387070 aaaaatgaggatttagtgtgaaaaatgtcaaaactcccgagagcagctattttctgctctccacggcgagtgacttactcgccatcgcgagtagcccatt 20386971  T
Q  212 tccttgagctcgccatagcgagcagt 237  Q
    | ||| ||||||||||||||||||||    
T  20386970 ttcttcagctcgccatagcgagcagt 20386945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 3 - 235
Target Start/End: Complemental strand, 22617307 - 22617076
Alignment:
Q  3 tgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaatt 102  Q
    ||||||||||||||||||| || | |||| ||||||| |||||||||||||| |  | | ||| ||||||||||| | || |||||| |||||| || ||    
T  22617307 tgatttttaaaatgttgttataagacgtaagttggatggttttgagtgcctggattttt-tagagaggactgggccaatttttagattaaaaagtga-tt 22617210  T
Q  103 ggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaatttt-ctgctcgccacggtgaacgaattactcgctatagcga 201  Q
     |||||||||||||||| ||||||| |||||||||||||||||||||||||||| || |||| ||||||||||||| |||| | |||||||| |||||||    
T  22617209 agggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcaccatttttcctgctcgccacggcgaacaacttactcgccatagcga 22617110  T
Q  202 gtagcccatttccttgagctcgccatagcgagca 235  Q
    |||||| |||| |||||| |||||||||||||||    
T  22617109 gtagcctattttcttgagttcgccatagcgagca 22617076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 22433992 - 22434223
Alignment:
Q  1 cttgattttt-aaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaaggga 99  Q
    |||||||||| ||||||| |||  ||| |||  ||||||| |||||| ||||||| | || ||||| |||||| ||||||||| || | |||||||        
T  22433992 cttgatttttcaaaatgtcgttacaggacgtgggttggatggttttgggtgcctggatatatatagagaggaccgggcaagtttttgg-tcaaaaaaaag 22434090  T
Q  100 attggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagc 199  Q
    ||| |||||||||||||||||||||||| | ||||||| |||||||||||||||||| | |||||||||||||||||  ||  || ||||||||  ||||    
T  22434091 attagggagcttaaaaatgaggatttagtgtgaaaaatatcaaaactcccgagagcaactattttctgctcgccacgacgagtgacttactcgccctagc 22434190  T
Q  200 gagtagcccatttccttgagctcgccatagcgag 233  Q
    |||||| |||||||||||||||||||||||||||    
T  22434191 gagtag-ccatttccttgagctcgccatagcgag 22434223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 237
Target Start/End: Original strand, 22920355 - 22920589
Alignment:
Q  3 tgatttttaaaatgttgtttt-aggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaat 101  Q
    ||||||||||||||||||||| ||||||| | |||||| ||||||| |||||  ||||||||||  |||||| |||||||| || |||||||||||| ||    
T  22920355 tgatttttaaaatgttgtttttaggtcgtgttttggatggttttgactgccttgacatgtatagaaaggactaggcaagtttttggatcaaaaaggggat 22920454  T
Q  102 tggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcga 201  Q
    | | ||||||||||||| |||||| | | |||||   || |||   |||||||||   | |||||||||||||||  |||| | ||||| || || ||||    
T  22920455 tagagagcttaaaaatggggatttggtgtgaaaataatc-aaatggccgagagcaagcagtttctgctcgccacgacgaacaacttacttgccatggcga 22920553  T
Q  202 gtagcccatttccttgagctcgccatagcgagcagt 237  Q
     |  ||||||| |||||||| |||||||||||||||    
T  22920554 atcacccattttcttgagctggccatagcgagcagt 22920589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 15 - 176
Target Start/End: Complemental strand, 15267848 - 15267686
Alignment:
Q  15 tgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggggagcttaaa 114  Q
    |||||||||| |  ||| ||||||| |||||||||||||| |  | | ||| |||||||| |  | || | |||| ||||||   ||| |||||||||||    
T  15267848 tgttgttttaagatgtaagttggatagttttgagtgcctggatgtttttagagaggactgagacaattttcagattaaaaagatgattagggagcttaaa 15267749  T
Q  115 aatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttc-tgctcgccacg 176  Q
    ||||| ||||||| |||||||||||||||||||||||||||| || ||||| |||||||||||    
T  15267748 aatgaagatttagtgagaaaaatgtcaaaactcccgagagcaccatttttcttgctcgccacg 15267686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 3 - 156
Target Start/End: Original strand, 20011630 - 20011783
Alignment:
Q  3 tgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaatt 102  Q
    ||||||||||| ||||||| || |  ||| ||||||| |||||||||||||| |  | | ||| ||||||||||  | || |||||| ||||||   | |    
T  20011630 tgatttttaaattgttgttataaggtgtaagttggatagttttgagtgcctggatgtttttagagaggactgggtcaatttttagattaaaaagatgaat 20011729  T
Q  103 ggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
     |||||||||||||||| ||||||| |||||||| |||||||||||||||||||    
T  20011730 agggagcttaaaaatgaagatttagtgagaaaaacgtcaaaactcccgagagca 20011783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 41 - 156
Target Start/End: Original strand, 25624215 - 25624330
Alignment:
Q  41 gttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggggagcttaaaaatgaggatttagggagaaaaatgtc 140  Q
    ||||||||||||||||  | | ||| ||||||||||  | || |||||| ||||||   | | |||||||||||||||| | ||||||||||||||||||    
T  25624215 gttttgagtgcctgaatgtttttagagaggactgggacaatttttagattaaaaagatgaatagggagcttaaaaatgaagttttagggagaaaaatgtc 25624314  T
Q  141 aaaactcccgagagca 156  Q
    ||||||||||||||||    
T  25624315 aaaactcccgagagca 25624330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 14594366 - 14594418
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  14594366 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 14594418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 21683305 - 21683357
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  21683305 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 21683357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 21687654 - 21687706
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  21687654 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 21687706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 21690047 - 21690099
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  21690047 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 21690099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 23652600 - 23652652
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  23652600 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 23652652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 20006796 - 20006744
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| |||||||||||||||||| |||||||||    
T  20006796 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaacttccgagagca 20006744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 21685697 - 21685749
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||||||||||  |||||| ||||||||||||||||||||||||||||    
T  21685697 gggagcttaaaaatgaatatttagtgagaaaaatgtcaaaactcccgagagca 21685749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 36445377 - 36445429
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  36445377 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 36445429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 104 - 158
Target Start/End: Original strand, 20783482 - 20783536
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagc 158  Q
    |||||||||||| ||| | ||||| ||||||||||||||||||||||||||||||    
T  20783482 gggagcttaaaattgaagttttagtgagaaaaatgtcaaaactcccgagagcagc 20783536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 104 - 158
Target Start/End: Original strand, 22175678 - 22175732
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagc 158  Q
    ||||||||| || ||| ||||||| ||||||||||||||||||||||||||||||    
T  22175678 gggagcttagaattgaagatttagtgagaaaaatgtcaaaactcccgagagcagc 22175732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 156
Target Start/End: Original strand, 20973646 - 20973691
Alignment:
Q  111 taaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||    
T  20973646 taaaaatgaggttttagtgagaaaaatgtcaaaactcccgagagca 20973691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 20839551 - 20839603
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||||||| ||||||||||||||||||    
T  20839551 gggaacttaaaaatgaagatttagtgagaaaaatatcaaaactcccgagagca 20839603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 22063195 - 22063247
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| ||||||| ||||||||||||||||||||||||||||    
T  22063195 gggagcttataattgatgatttagtgagaaaaatgtcaaaactcccgagagca 22063247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 22744265 - 22744213
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| | ||||  ||||||||||||||||||||||||||||    
T  22744265 gggagcttaaaaatgaagttttattgagaaaaatgtcaaaactcccgagagca 22744213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 33089439 - 33089387
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| | ||||| |||||||||||||||||| |||||||||    
T  33089439 gggagcttaaaaatgaagttttagtgagaaaaatgtcaaaacttccgagagca 33089387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 41009086 - 41009138
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||||| ||||| |||||||||||||||||||| |||||||    
T  41009086 gggaacttaaaaatgaggttttagtgagaaaaatgtcaaaactccagagagca 41009138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 155
Target Start/End: Complemental strand, 22178154 - 22178103
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagc 155  Q
    ||||||||| || ||| ||||||| |||||||||||||||||||||||||||    
T  22178154 gggagcttagaattgatgatttagtgagaaaaatgtcaaaactcccgagagc 22178103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 11392210 - 11392262
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||||| || || ||||||||||||||||||||||||||||    
T  11392210 gggagcttataattgaggtttgagtgagaaaaatgtcaaaactcccgagagca 11392262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 22025192 - 22025244
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| ||||||| ||||||| ||||||||||||||||||||    
T  22025192 gggagcttagaattgatgatttagtgagaaaattgtcaaaactcccgagagca 22025244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 22050767 - 22050715
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| |||| || ||| ||||||| ||||||||||||||||||||||||||||    
T  22050767 gggaacttagaattgatgatttagtgagaaaaatgtcaaaactcccgagagca 22050715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 31412114 - 31412166
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| | ||||| ||||||||||||||||||||||||||||    
T  31412114 gggagcttagaattgaagttttagtgagaaaaatgtcaaaactcccgagagca 31412166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 31418296 - 31418348
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| | ||||| ||||||||||||||||||||||||||||    
T  31418296 gggagcttagaattgaagttttagtgagaaaaatgtcaaaactcccgagagca 31418348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 167
Target Start/End: Original strand, 19987808 - 19987871
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctg 167  Q
    |||| ||||||||||| ||||||| ||||||| ||||||||||||| ||| ||||  |||||||    
T  19987808 gggaacttaaaaatgaagatttagtgagaaaagtgtcaaaactcccaagaccagcctttttctg 19987871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 154
Target Start/End: Complemental strand, 1264593 - 1264543
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagag 154  Q
    ||||||||| || ||| | ||||| ||||||||||||||||||||||||||    
T  1264593 gggagcttagaattgaagttttagtgagaaaaatgtcaaaactcccgagag 1264543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 173
Target Start/End: Complemental strand, 19860081 - 19860012
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcc 173  Q
    |||||||||||||||| ||||| | ||||||||||| || ||||| ||||||| |  ||||||| |||||    
T  19860081 gggagcttaaaaatgaagattttgtgagaaaaatgttaacactccagagagcaccctttttctgttcgcc 19860012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 188 - 233
Target Start/End: Original strand, 23652674 - 23652719
Alignment:
Q  188 actcgctatagcgagtagcccatttccttgagctcgccatagcgag 233  Q
    |||||| |||||||||| ||||||| |||||| |||||||||||||    
T  23652674 actcgccatagcgagtaacccattttcttgagttcgccatagcgag 23652719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 145; Significance: 2e-76; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 8711223 - 8710987
Alignment:
Q  1 cttgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaa 100  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||| |  |||||||||||||||| || ||||||||||||||    
T  8711223 cttgatttttaaaatgttgttttaggtcgtttgttggatggttttgagtgcctggacatgtacaaagaggactgggcaagtttttggatcaaaaagggaa 8711124  T
Q  101 ttggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcg 200  Q
    || ||||||||||||||| |||||||| | |||||||||||||||||||||||| ||| |||||||||||||||||| ||  || |||||||| || |||    
T  8711123 ttagggagcttaaaaatggggatttagtgtgaaaaatgtcaaaactcccgagagtagctattttctgctcgccacggcgagtgacttactcgccatcgcg 8711024  T
Q  201 agtagcccatttccttgagctcgccatagcgagcagt 237  Q
    ||| ||||||||  |||||||||||||||||||||||    
T  8711023 agttgcccattttattgagctcgccatagcgagcagt 8710987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 2 - 237
Target Start/End: Original strand, 33661949 - 33662185
Alignment:
Q  2 ttgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgt-atagggaggactgggcaagttgttagatcaaaaagggaa 100  Q
    |||||||||||||||||||||||||| |||||||||||  ||||||||||||| |  | | || | ||||||||  |||||| ||||||||||||| | |    
T  33661949 ttgatttttaaaatgttgttttaggtagtatgttggatgattttgagtgcctggatgttttatggagaggactgatcaagtttttagatcaaaaagagga 33662048  T
Q  101 ttggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcg 200  Q
    || ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||  |||||||| | |||||| ||||| || || |||    
T  33662049 ttagggagcttaaaaatgaggatttagtcagaaaaatgtcaaaactcccgagagcagcaattttcaactcgccacagcgaacgacttacttgccatggcg 33662148  T
Q  201 agtagcccatttccttgagctcgccatagcgagcagt 237  Q
    |||||||||||||||||||||||||||||||||||||    
T  33662149 agtagcccatttccttgagctcgccatagcgagcagt 33662185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 2 - 225
Target Start/End: Complemental strand, 13878454 - 13878231
Alignment:
Q  2 ttgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaat 101  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||||||| |  | ||| | || ||||   |||||| ||||||||||||| | ||    
T  13878454 ttgatttttaaaatgttgttttaggtagtatgttggatggttttgagtgcctggatgtttatggagaagactaatcaagtttttagatcaaaaagaggat 13878355  T
Q  102 tggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcga 201  Q
    | |||||||||||||||||||||||| |||||||||||||||||||||||||||| || |||||||||||||| || || | | ||||||||  ||||||    
T  13878354 tagggagcttaaaaatgaggatttagtgagaaaaatgtcaaaactcccgagagcaccatttttctgctcgccatggcgagcaacttactcgccctagcga 13878255  T
Q  202 gtagcccatttccttgagctcgcc 225  Q
    |||||| |||| |||||| |||||    
T  13878254 gtagcctattttcttgagttcgcc 13878231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 6 - 237
Target Start/End: Original strand, 16371104 - 16371335
Alignment:
Q  6 tttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggg 105  Q
    |||| |||||||| || |||| |||  ||||||| |||||||||||||| |  | | ||| |||||||||||||||| ||||||||||||| | ||| ||    
T  16371104 ttttcaaaatgttcttataggacgtgagttggatggttttgagtgcctggatgtttttagagaggactgggcaagtttttagatcaaaaagaggattagg 16371203  T
Q  106 gagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcgagtag 205  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||||| || ||||||||||||||||| | || | |||||||| |||||||||||    
T  16371204 gagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcaccatttttctgctcgccacggcggacaacttactcgccatagcgagtag 16371303  T
Q  206 cccatttccttgagctcgccatagcgagcagt 237  Q
    ||| ||| ||  || |||||||||||||||||    
T  16371304 ccctttttctgaagttcgccatagcgagcagt 16371335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 2 - 174
Target Start/End: Original strand, 21189341 - 21189513
Alignment:
Q  2 ttgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaat 101  Q
    ||||||||||||||||| ||||||||||||| |||||| |||||||||||||| |||||||||| |||||||||||||||| |||||||||| || | ||    
T  21189341 ttgatttttaaaatgttattttaggtcgtatattggatggttttgagtgcctggacatgtatagagaggactgggcaagtttttagatcaaagagaggat 21189440  T
Q  102 tggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcca 174  Q
      ||||||||||| |||||||||||  |||||||||||||||||||||||||||| | |||||||| ||||||    
T  21189441 cagggagcttaaatatgaggatttaatgagaaaaatgtcaaaactcccgagagcacctattttctgttcgcca 21189513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 2 - 173
Target Start/End: Complemental strand, 13882059 - 13881888
Alignment:
Q  2 ttgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaat 101  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||||||  |  | ||| | ||||||||  |||||| ||||||||||| | | ||    
T  13882059 ttgatttttaaaatgttgttttaggtagtatgttggatggttttgagtgcctagatgtttatggagaggactgatcaagtttttagatcaaaaggaggat 13881960  T
Q  102 tggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcc 173  Q
    | |||||||||||||||||||||||| ||||||||||||||||||| |||||||| || |||||||||||||    
T  13881959 tagggagcttaaaaatgaggatttagtgagaaaaatgtcaaaactctcgagagcaccatttttctgctcgcc 13881888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 6 - 232
Target Start/End: Original strand, 15416262 - 15416488
Alignment:
Q  6 tttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggg 105  Q
    |||| |||| |||||| |||| |||  ||||||| |||||||||||||| |  | | ||| |||||||||||||||| ||||||||||| |   ||| ||    
T  15416262 ttttcaaaacgttgttataggacgtgagttggatggttttgagtgcctggatgtttttagagaggactgggcaagtttttagatcaaaaggatgattagg 15416361  T
Q  106 gagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcgagtag 205  Q
     ||||||||||||| ||||||| |||||||||||||||||||||||||||| |  ||| ||||||||||||  |||| |  ||||||| |||||||||||    
T  15416362 aagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcacctttttgctgctcgccacgtcgaacaacctactcgccatagcgagtag 15416461  T
Q  206 cccatttccttgagctcgccatagcga 232  Q
    ||| ||| ||  || ||||||||||||    
T  15416462 ccccttttctgaagttcgccatagcga 15416488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 176
Target Start/End: Complemental strand, 15076031 - 15075857
Alignment:
Q  3 tgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaatt 102  Q
    ||||||| ||| ||||||| || |  ||| |||||||||||||||||||||| |  | | ||| ||||||||||  | || |||||| ||||||   | |    
T  15076031 tgattttcaaattgttgttataagatgtaagttggatcgttttgagtgcctggatgtttttagagaggactgggacaatttttagattaaaaagatgaat 15075932  T
Q  103 ggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttc-tgctcgccacg 176  Q
      ||||||||||||||| ||||||| ||||||||||||||||||||||||||||  | ||||| |||||||||||    
T  15075931 acggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcataatttttcttgctcgccacg 15075857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 104 - 176
Target Start/End: Complemental strand, 32490335 - 32490262
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttc-tgctcgccacg 176  Q
    |||||||||||||||| ||||||| ||||||||||||||||||| |||||||| || ||||| |||||||||||    
T  32490335 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcacgagagcaccatttttcttgctcgccacg 32490262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 18165901 - 18165953
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  18165901 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 18165953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 30239633 - 30239581
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  30239633 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 30239581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 104 - 157
Target Start/End: Original strand, 14555698 - 14555751
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcag 157  Q
    |||| ||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  14555698 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcag 14555751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 15004728 - 15004780
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||||||| || ||||||| ||||||||||||||||||||||||||||    
T  15004728 gggagcttaaaaaagaagatttagtgagaaaaatgtcaaaactcccgagagca 15004780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 15360438 - 15360490
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  15360438 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 15360490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 16228735 - 16228787
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| |||| || ||||||||||||||||||||||||||||    
T  16228735 gggagcttaaaaatgaagattcagtgagaaaaatgtcaaaactcccgagagca 16228787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 16485205 - 16485153
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| | ||||| ||||||||||||||||||||||||||||    
T  16485205 gggagcttaaaaatgaagttttagtgagaaaaatgtcaaaactcccgagagca 16485153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 17176927 - 17176875
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||| ||||    
T  17176927 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgaaagca 17176875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 18261862 - 18261810
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| || |||||||||||||||||||||||||    
T  18261862 gggagcttaaaaatgaagatttagtgacaaaaatgtcaaaactcccgagagca 18261810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 18271827 - 18271775
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| || |||||||||||||||||||||||||    
T  18271827 gggagcttaaaaatgaagatttagtgacaaaaatgtcaaaactcccgagagca 18271775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 41528700 - 41528752
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  41528700 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 41528752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 53904961 - 53905013
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| |||||| |||||||||||||||||||||    
T  53904961 gggagcttaaaaatgaagatttagtgagaaatatgtcaaaactcccgagagca 53905013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 104 - 158
Target Start/End: Original strand, 10972550 - 10972604
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagc 158  Q
    |||||||||||| ||| | ||||| ||||||||||||||||||||||||||||||    
T  10972550 gggagcttaaaattgaagttttagtgagaaaaatgtcaaaactcccgagagcagc 10972604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 67 - 165
Target Start/End: Complemental strand, 15318556 - 15318458
Alignment:
Q  67 gaggactgggcaagttgttagatcaaaaagggaattggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttc 165  Q
    ||||||||||  | || |||||| ||||||   ||| |||||||||||||||| ||||||| |||||||||||||||||||  ||||||| || |||||    
T  15318556 gaggactgggacaatttttagattaaaaagatgattagggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcttgagagcaccatttttc 15318458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 109 - 167
Target Start/End: Complemental strand, 23122162 - 23122104
Alignment:
Q  109 cttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctg 167  Q
    |||| |||||||||||||| |||||||||||||||||||| |||||||||  |||||||    
T  23122162 cttagaaatgaggatttagtgagaaaaatgtcaaaactcctgagagcagcctttttctg 23122104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 173
Target Start/End: Complemental strand, 20940828 - 20940759
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcc 173  Q
    ||||||||| || ||| ||||||| |||||||||||||||||| ||||||||| || ||||||| |||||    
T  20940828 gggagcttagaattgatgatttagtgagaaaaatgtcaaaacttccgagagcaccacttttctgttcgcc 20940759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 11170856 - 11170908
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| ||||||| ||||||||||||||||||||||||||||    
T  11170856 gggagcttagaattgatgatttagtgagaaaaatgtcaaaactcccgagagca 11170908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 14821918 - 14821866
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| | ||||| ||||||||||||||||||||| ||||||    
T  14821918 gggagcttaaaaatgaagttttagtgagaaaaatgtcaaaactcccaagagca 14821866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 139
Target Start/End: Complemental strand, 15069431 - 15069295
Alignment:
Q  3 tgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaatt 102  Q
    ||||||| ||| |||||||||| |  ||| ||||||| |||||||||||||| |  | | ||| ||| ||||||  | || |||||| ||||||  || |    
T  15069431 tgattttcaaattgttgttttaagatgtaagttggatggttttgagtgcctggatgtttttagagagtactgggacaatttttagattaaaaagataaat 15069332  T
Q  103 ggggagcttaaaaatgaggatttagggagaaaaatgt 139  Q
     |||||||||||||||| ||||||| |||||||||||    
T  15069331 agggagcttaaaaatgaagatttagtgagaaaaatgt 15069295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 15547120 - 15547068
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| | ||||| |||||||||||||||||| |||||||||    
T  15547120 gggagcttaaaaatgaagttttagtgagaaaaatgtcaaaacttccgagagca 15547068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 19127951 - 19128003
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||| ||||| || || ||||||||||||||||||||||||||||    
T  19127951 gggagcttaaaattgaggtttgagtgagaaaaatgtcaaaactcccgagagca 19128003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 104 - 158
Target Start/End: Original strand, 10783899 - 10783953
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagc 158  Q
    |||||||||||| ||| | ||||| |||||||||||||||||||| |||||||||    
T  10783899 gggagcttaaaattgaagttttagtgagaaaaatgtcaaaactcctgagagcagc 10783953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 173
Target Start/End: Original strand, 1650673 - 1650742
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcc 173  Q
    |||| ||||||||||| | ||| | |||||||||||||||||||||||||||| |  ||||||| |||||    
T  1650673 gggaacttaaaaatgaagttttcgtgagaaaaatgtcaaaactcccgagagcaccccttttctgttcgcc 1650742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 188 - 236
Target Start/End: Complemental strand, 14158225 - 14158177
Alignment:
Q  188 actcgctatagcgagtagcccatttccttgagctcgccatagcgagcag 236  Q
    |||||| || |||||||| || |||||||||||||||||||||||||||    
T  14158225 actcgccatggcgagtaggccttttccttgagctcgccatagcgagcag 14158177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 49051521 - 49051469
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| | ||||| ||||||||||||||||||||||||||||    
T  49051521 gggagcttagaattgaagttttagtgagaaaaatgtcaaaactcccgagagca 49051469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 188 - 235
Target Start/End: Complemental strand, 14164909 - 14164862
Alignment:
Q  188 actcgctatagcgagtagcccatttccttgagctcgccatagcgagca 235  Q
    |||||| || |||||||| || ||||||||||||||||||||||||||    
T  14164909 actcgccatggcgagtaggccttttccttgagctcgccatagcgagca 14164862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 156
Target Start/End: Original strand, 43284530 - 43284565
Alignment:
Q  121 gatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||| ||||||||||||||||||||||||||||    
T  43284530 gatttagtgagaaaaatgtcaaaactcccgagagca 43284565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 2972341 - 2972393
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| |  ||||| || || ||||||||||||||||||||||||||||    
T  2972341 gggagcttagatttgaggtttgagtgagaaaaatgtcaaaactcccgagagca 2972393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 13454291 - 13454239
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| | ||||| |||||||||||||||||||| |||||||    
T  13454291 gggagcttagaattgaagttttagtgagaaaaatgtcaaaactccagagagca 13454239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 14487155 - 14487104
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||||| ||||||||||| ||||||||    
T  14487155 gggaacttaaaaatgaagatttagtgagaaaa-tgtcaaaactctcgagagca 14487104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 15325434 - 15325383
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||||| ||| ||||||||||||||||    
T  15325434 gggaacttaaaaatgaagatttagtgagaaaa-tgttaaaactcccgagagca 15325383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 16999776 - 16999828
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| | || || ||||||||||||||||||||||||||||    
T  16999776 gggagcttagaattgaagtttgagtgagaaaaatgtcaaaactcccgagagca 16999828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 46044478 - 46044530
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| | || || ||||||||||||||||||||||||||||    
T  46044478 gggagcttagaattgaagtttgagtgagaaaaatgtcaaaactcccgagagca 46044530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 47870647 - 47870699
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| | || || ||||||||||||||||||||||||||||    
T  47870647 gggagcttagaattgaagtttgagtgagaaaaatgtcaaaactcccgagagca 47870699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 144; Significance: 7e-76; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 2 - 237
Target Start/End: Complemental strand, 23375591 - 23375357
Alignment:
Q  2 ttgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaat 101  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||  |  | ||| | ||||||||  |||||| ||||||||||||| | ||    
T  23375591 ttgatttttaaaatgttgttttaggtcgtatgttggat-gttttgagtgcctagatgtttatggagaggactgatcaagtttttagatcaaaaagaggat 23375493  T
Q  102 tggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcga 201  Q
    | ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| | || ||||    
T  23375492 tagggagcttaaaaatgaggatttagtaagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggggaacgacttactctccatggcga 23375393  T
Q  202 gtagcccatttccttgagctcgccatagcgagcagt 237  Q
    ||||||||||| ||||||||||||||||||||||||    
T  23375392 gtagcccattttcttgagctcgccatagcgagcagt 23375357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 6 - 237
Target Start/End: Complemental strand, 24160937 - 24160706
Alignment:
Q  6 tttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggg 105  Q
    |||| ||||||||||| |||| |||  ||||||| |||||||||| |||||  | | ||| |||| |||| |||||| ||||||||||||||| ||| ||    
T  24160937 ttttcaaaatgttgttataggacgtgagttggatggttttgagtgtctgaatgtttttagagagggctggacaagtttttagatcaaaaaggggattagg 24160838  T
Q  106 gagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcgagtag 205  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||| |||| || ||||||||||||||||| |||| | |||||||| |||||||||||    
T  24160837 gagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgaaagcaccatttttctgctcgccacggcgaacaacttactcgccatagcgagtag 24160738  T
Q  206 cccatttccttgagctcgccatagcgagcagt 237  Q
    ||| ||| ||  ||||||||||||||||||||    
T  24160737 ccctttttctgaagctcgccatagcgagcagt 24160706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 33 - 237
Target Start/End: Complemental strand, 40261942 - 40261739
Alignment:
Q  33 gttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggggagcttaaaaatgaggatttagggaga 132  Q
    |||||||  ||||| ||||||| | || ||||| |||||||||||||||| || ||||||||| |  ||| |||||||||||||||||||||||| | ||    
T  40261942 gttggatgattttgggtgcctggatatatatagagaggactgggcaagtttttggatcaaaaaagagattagggagcttaaaaatgaggatttagtgtga 40261843  T
Q  133 aaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcgagtagcccatttccttgagctcgccatagcga 232  Q
    |||||||||||||||||||||| | | |||||||||||||||||| ||| || |||||||  ||||||||||| ||||||||||||||| ||||||||||    
T  40261842 aaaatgtcaaaactcccgagagaaactattttctgctcgccacggcgaatgacttactcgtcatagcgagtag-ccatttccttgagcttgccatagcga 40261744  T
Q  233 gcagt 237  Q
    |||||    
T  40261743 gcagt 40261739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 3 - 235
Target Start/End: Complemental strand, 25651897 - 25651666
Alignment:
Q  3 tgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaatt 102  Q
    ||||||||||| ||||||| |  | |||| ||||||| |||||||||||||| |  | | ||| ||||||||| | | || |||||| ||||||   |||    
T  25651897 tgatttttaaattgttgttattagacgtaagttggatggttttgagtgcctggatgtttttagagaggactggactaatttttagattaaaaagatgatt 25651798  T
Q  103 ggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcgag 202  Q
     |||||||||||||||| ||||||| ||||||||||||||||||||||| |||| || ||| ||||||||||||| |||| |   |||||| ||||||||    
T  25651797 agggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgatagcaccattttcctgctcgccacggcgaacaacgaactcgccatagcgag 25651698  T
Q  203 tagcccatttccttgagctcgccatagcgagca 235  Q
    |||||| ||| ||||||||||||||||||||||    
T  25651697 tagccc-ttttcttgagctcgccatagcgagca 25651666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 6 - 174
Target Start/End: Complemental strand, 23086070 - 23085902
Alignment:
Q  6 tttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggg 105  Q
    |||| ||||||||| | |||| |||  |||||||  ||||||||||||| |  | ||||| ||||| |||||||||| || |||||| ||    ||| ||    
T  23086070 ttttcaaaatgttgctataggacgtgggttggatgtttttgagtgcctggatgtttatagagaggattgggcaagtttttggatcaagaaaaagattagg 23085971  T
Q  106 gagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcca 174  Q
    ||||||||||||||| |||||| | ||||||||||||||||||||||||||   |||||||||||||||    
T  23085970 gagcttaaaaatgagaatttagtgtgaaaaatgtcaaaactcccgagagcaattattttctgctcgcca 23085902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 24669338 - 24669493
Alignment:
Q  1 cttgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaa 100  Q
    ||||||||||||| ||||||| || |  ||| ||||||| ||||||||||||||||  | | ||| ||||||||||  | || |||||| ||||||   |    
T  24669338 cttgatttttaaattgttgttataaggtgtaagttggatagttttgagtgcctgaatgtttttagagaggactgggacaatttttagattaaaaagatga 24669437  T
Q  101 ttggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
     | |||||||||||||||| || |||| ||||||||||||||||||||||||||||    
T  24669438 atagggagcttaaaaatgacgagttagtgagaaaaatgtcaaaactcccgagagca 24669493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 104 - 233
Target Start/End: Complemental strand, 22841525 - 22841406
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttc-tgctcgccacggtgaacgaattactcgctatagcgag 202  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||||| || ||||| |||||||||||          ||||||| ||||||||    
T  22841525 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcaccatttttcttgctcgccacg----------tactcgccatagcgag 22841436  T
Q  203 tagcccatttccttgagctcgccatagcgag 233  Q
    |||| ||||| |||||| |||||||||||||    
T  22841435 tagctcattt-cttgagttcgccatagcgag 22841406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 19036043 - 19035991
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  19036043 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 19035991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 21121238 - 21121290
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  21121238 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 21121290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 23149170 - 23149118
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  23149170 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 23149118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 23560960 - 23560908
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  23560960 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 23560908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 25267764 - 25267712
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  25267764 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 25267712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 104 - 153
Target Start/End: Complemental strand, 23291486 - 23291437
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgaga 153  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  23291486 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgaga 23291437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 17634454 - 17634402
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| | ||||| ||||||||||||||||||||||||||||    
T  17634454 gggagcttaaaaatgaagttttagtgagaaaaatgtcaaaactcccgagagca 17634402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 23753351 - 23753299
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  23753351 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 23753299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 25174431 - 25174379
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||| | ||||||||||||||||||||||||||||    
T  25174431 gggagcttaaaaatgaagatttggtgagaaaaatgtcaaaactcccgagagca 25174379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 25365537 - 25365589
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  25365537 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 25365589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 109 - 156
Target Start/End: Original strand, 32911100 - 32911147
Alignment:
Q  109 cttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  32911100 cttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 32911147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 104 - 154
Target Start/End: Complemental strand, 24943938 - 24943888
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagag 154  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||    
T  24943938 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagag 24943888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 153
Target Start/End: Original strand, 20913949 - 20913998
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgaga 153  Q
    |||||||||||||||| ||||||| |||||||||||||||||| ||||||    
T  20913949 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaacttccgaga 20913998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 63
Target Start/End: Original strand, 22790644 - 22790701
Alignment:
Q  6 tttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtat 63  Q
    |||| |||||||||||||||| ||| |||||||| |||||||||||||| ||||||||    
T  22790644 ttttcaaaatgttgttttaggacgtgtgttggatggttttgagtgcctggacatgtat 22790701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 153
Target Start/End: Complemental strand, 24652877 - 24652828
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgaga 153  Q
    |||| ||||||||||| ||||||| |||||||||||||||||||||||||    
T  24652877 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgaga 24652828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 2106134 - 2106082
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| ||||||| ||||||||||||||||||||||||||||    
T  2106134 gggagcttagaattgatgatttagtgagaaaaatgtcaaaactcccgagagca 2106082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 8889583 - 8889635
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||| ||||| ||||||| |||||||||||||||| |||||||||||    
T  8889583 gggagcttaagaatgaagatttagtgagaaaaatgtcaaaattcccgagagca 8889635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 20648636 - 20648584
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| | ||||| |||||||||||||||||| |||||||||    
T  20648636 gggagcttaaaaatgaagttttagtgagaaaaatgtcaaaacttccgagagca 20648584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 20724573 - 20724521
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||||| ||||  ||||||||||||||||||||||||||||    
T  20724573 gggaacttaaaaatgaggttttactgagaaaaatgtcaaaactcccgagagca 20724521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 24659321 - 24659269
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||| | ||||||| ||||||||||||||||||||||||||||    
T  24659321 gggaacttaaaaattaagatttagtgagaaaaatgtcaaaactcccgagagca 24659269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 25107083 - 25107135
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||||||| ||||||||||||||||||    
T  25107083 gggaacttaaaaatgaagatttagtgagaaaaatatcaaaactcccgagagca 25107135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 198 - 237
Target Start/End: Complemental strand, 23085899 - 23085860
Alignment:
Q  198 gcgagtagcccatttccttgagctcgccatagcgagcagt 237  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  23085899 gcgagtagcccttttccttgagctcgccatagcgagcagt 23085860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 19703097 - 19703149
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||| | | | ||||| ||||||||||||||||||||||||||||    
T  19703097 gggagcttaaaattaaagttttagtgagaaaaatgtcaaaactcccgagagca 19703149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 22810437 - 22810385
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| |||||||| || ||||||| ||||||||| ||||||||||||||||||    
T  22810437 gggaacttaaaaaagaagatttagtgagaaaaatatcaaaactcccgagagca 22810385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 156
Target Start/End: Complemental strand, 14564353 - 14564302
Alignment:
Q  105 ggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||| || ||||| || || ||||||||||||||||||||||||||||    
T  14564353 ggagcttagaattgaggtttgagtgagaaaaatgtcaaaactcccgagagca 14564302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 19649159 - 19649211
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| | ||||| ||||||||||||||||||||||| ||||    
T  19649159 gggagcttagaattgaagttttagtgagaaaaatgtcaaaactcccgaaagca 19649211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 27272677 - 27272625
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||| |||||  | || |||||||||||||||| |||||||||||    
T  27272677 gggagcttaaaattgaggtctgagtgagaaaaatgtcaaaattcccgagagca 27272625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 173
Target Start/End: Original strand, 28970910 - 28970950
Alignment:
Q  133 aaaatgtcaaaactcccgagagcagcaattttctgctcgcc 173  Q
    ||||||||||||||||||||||||||  ||||||| |||||    
T  28970910 aaaatgtcaaaactcccgagagcagcctttttctgttcgcc 28970950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 140; Significance: 2e-73; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 2 - 237
Target Start/End: Original strand, 28204105 - 28204340
Alignment:
Q  2 ttgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaat 101  Q
    ||||||||||||||||| |||||||| ||||||| ||| |||||||||||||| |  | ||| | ||||||||  |||||| ||||||||||||| | ||    
T  28204105 ttgatttttaaaatgttattttaggtagtatgttcgatagttttgagtgcctggatgtttatggagaggactgatcaagtttttagatcaaaaagaggat 28204204  T
Q  102 tggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcga 201  Q
    | ||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| || |||||| |||||||| || ||||    
T  28204205 tagggcgcttaaaaatgaggatttagtcagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccatggcgaacgacttactcgccatcgcga 28204304  T
Q  202 gtagcccatttccttgagctcgccatagcgagcagt 237  Q
    ||||||||||||||||||||||||||||||||||||    
T  28204305 gtagcccatttccttgagctcgccatagcgagcagt 28204340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 2 - 235
Target Start/End: Complemental strand, 20901807 - 20901575
Alignment:
Q  2 ttgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaat 101  Q
    ||||||||||||||||||||||||||||||||| |||| |||||||||||||| |  |  || | ||||||||||| | || ||| || ||||||    |    
T  20901807 ttgatttttaaaatgttgttttaggtcgtatgtcggatggttttgagtgcctggatgttaatggagaggactgggccaatttttatattaaaaagatgtt 20901708  T
Q  102 tggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcga 201  Q
    | | |||||||||||||| ||||||| ||||||||||||||||||  |||||||| || ||||||||||||||||| |||| | |||||||| |||||||    
T  20901707 tagagagcttaaaaatgaagatttagtgagaaaaatgtcaaaactttcgagagcaccatttttctgctcgccacggcgaacaacttactcgccatagcga 20901608  T
Q  202 gtagcccatttccttgagctcgccatagcgagca 235  Q
    |||||| |||| |||||| ||||| |||||||||    
T  20901607 gtagcctattttcttgagttcgcc-tagcgagca 20901575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 6 - 125
Target Start/End: Complemental strand, 14801058 - 14800939
Alignment:
Q  6 tttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggg 105  Q
    |||| |||||| |||||||||||||  ||||||| ||| |||||||||  |||| ||||| ||||||| |||||||| || |||||||||||||||| ||    
T  14801058 ttttgaaaatgctgttttaggtcgtgggttggatggttatgagtgccttgacatatatagagaggactaggcaagtttttggatcaaaaagggaattagg 14800959  T
Q  106 gagcttaaaaatgaggattt 125  Q
    ||||||||||||| ||||||    
T  14800958 gagcttaaaaatggggattt 14800939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 6 - 125
Target Start/End: Complemental strand, 14809932 - 14809813
Alignment:
Q  6 tttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggg 105  Q
    |||| |||||| |||||||||||||  ||||||| ||| |||||||||  |||| ||||| ||||||| |||||||| || |||||||||||||||| ||    
T  14809932 ttttgaaaatgctgttttaggtcgtgggttggatggttatgagtgccttgacatatatagagaggactaggcaagtttttggatcaaaaagggaattagg 14809833  T
Q  106 gagcttaaaaatgaggattt 125  Q
    ||||||||||||| ||||||    
T  14809832 gagcttaaaaatggggattt 14809813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 174
Target Start/End: Original strand, 21527161 - 21527332
Alignment:
Q  3 tgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaatt 102  Q
    ||||||||||||||||||| || | |||| ||||||  |||||||||||||| |  | | |||  ||||||| || | || |||||| ||||||  ||||    
T  21527161 tgatttttaaaatgttgttataagacgtaagttggacggttttgagtgcctggatgtttttagataggactgtgccaatttttagattaaaaagataatt 21527260  T
Q  103 ggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcca 174  Q
     | |||||||||||||| ||||||| |||||||||||||||||||||||||||| || |||  |||||||||    
T  21527261 agcgagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcaccattttcttgctcgcca 21527332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 176
Target Start/End: Complemental strand, 8685914 - 8685740
Alignment:
Q  3 tgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaatt 102  Q
    ||||||||||||||||||| || |  ||| |||| || ||||||||||||||    | | ||| ||||||| ||  | || |||||| ||||||   |||    
T  8685914 tgatttttaaaatgttgttataagatgtaagttgaatggttttgagtgcctgggtgtttttagagaggacttggacaatttttagattaaaaagatgatt 8685815  T
Q  103 ggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttc-tgctcgccacg 176  Q
     |||||||||||||||| ||||||| |||||||||||||||||||||||||||| || ||||| |||||||||||    
T  8685814 agggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcaccatttttcttgctcgccacg 8685740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 104 - 176
Target Start/End: Complemental strand, 8683627 - 8683554
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttc-tgctcgccacg 176  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||||| || ||||| |||||||||||    
T  8683627 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcaccatttttcttgctcgccacg 8683554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 21734035 - 21734087
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  21734035 gggagcttaaaaatgaggatttagtgagaaaaatgtcaaaactcccgagagca 21734087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 24476005 - 24475850
Alignment:
Q  1 cttgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaa 100  Q
    ||||||||| ||| ||||||| || |  ||| ||||||| |||||||||||||  |  | | ||| ||||||||||  | || |||||| ||||||   |    
T  24476005 cttgattttcaaattgttgttataaggtgtaagttggatagttttgagtgccttgatgtttttagagaggactgggacaatttttagattaaaaagatga 24475906  T
Q  101 ttggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    || |||||||||||||||| ||||||| ||||||||| ||||||||||||||||||    
T  24475905 ttagggagcttaaaaatgaagatttagtgagaaaaatatcaaaactcccgagagca 24475850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 236
Target Start/End: Original strand, 25091798 - 25092020
Alignment:
Q  4 gatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattg 103  Q
    |||||| ||| ||||||| || |  ||| ||||||| |||||||||||||| |  | | ||| |||||||||   | || |||||| ||||||   |||     
T  25091798 gattttcaaattgttgttataaggtgtaagttggatagttttgagtgcctggatgtttttagagaggactggaacaatttttagattaaaaagatgatta 25091897  T
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttct-gctcgccacggtgaacgaattactcgctatagcgag 202  Q
    ||||||| |||||||| ||||||| |||||||||||||||||||||||||||| |  |||||| | ||||| ||          ||||||| ||||||||    
T  25091898 gggagctcaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcaccctttttctcgttcgcctcg----------tactcgccatagcgag 25091987  T
Q  203 tagcccatttccttgagctcgccatagcgagcag 236  Q
    ||||||| ||||||||| ||||||||||||||||    
T  25091988 tagccca-ttccttgagttcgccatagcgagcag 25092020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 15316120 - 15316172
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  15316120 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 15316172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 21410292 - 21410344
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  21410292 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 21410344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 3706393 - 3706452
Alignment:
Q  114 aaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcc 173  Q
    |||||||||||||| ||||||||||||||||||||||||||||||  ||||||| |||||    
T  3706393 aaatgaggatttagtgagaaaaatgtcaaaactcccgagagcagcctttttctgttcgcc 3706452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 23631518 - 23631456
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttct 166  Q
    |||||||| ||||||| ||||||| |||||||||||||||||||||||||||| | |||||||    
T  23631518 gggagctttaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcacccattttct 23631456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 104 - 153
Target Start/End: Complemental strand, 41312708 - 41312659
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgaga 153  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  41312708 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgaga 41312659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 5381191 - 5381139
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||| ||||||||    
T  5381191 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactctcgagagca 5381139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 19853582 - 19853530
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  19853582 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 19853530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 19859717 - 19859665
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  19859717 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 19859665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 21733036 - 21732984
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  21733036 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 21732984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 21986517 - 21986569
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||| ||| ||||||| ||||||||||||||||||||||||||||    
T  21986517 gggagcttaaaagtgaagatttagtgagaaaaatgtcaaaactcccgagagca 21986569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 22434570 - 22434622
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||| ||| ||||||| ||||||||||||||||||||||||||||    
T  22434570 gggagcttaaaattgatgatttagtgagaaaaatgtcaaaactcccgagagca 22434622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 23712756 - 23712704
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||| ||||||| ||||||| ||||||||||||||||||||||||||||    
T  23712756 gggagctttaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 23712704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 24238023 - 24238075
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  24238023 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 24238075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 104 - 167
Target Start/End: Original strand, 20837818 - 20837881
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctg 167  Q
    |||| |||||||| || ||||||| ||||||||||||||||||||||||||||||  |||||||    
T  20837818 gggaacttaaaaaggaagatttagtgagaaaaatgtcaaaactcccgagagcagcctttttctg 20837881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 105 - 156
Target Start/End: Original strand, 21745217 - 21745268
Alignment:
Q  105 ggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||||||||| | ||||| ||||||||||||||||||||||||||||    
T  21745217 ggagcttaaaaatgaagttttagtgagaaaaatgtcaaaactcccgagagca 21745268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 107 - 156
Target Start/End: Original strand, 31926933 - 31926982
Alignment:
Q  107 agcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  31926933 agcttaaaaatgaagatttagtgagaaaaatgtcaaaactcctgagagca 31926982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 954705 - 954757
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| ||||||| ||||||||||||||||||||||||||||    
T  954705 gggagcttagaattgatgatttagtgagaaaaatgtcaaaactcccgagagca 954757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 19666345 - 19666397
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| |||||||||||||||||| |||||||||    
T  19666345 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaacttccgagagca 19666397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 20595728 - 20595780
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||| |||| ||| ||||||| ||||||||||||||||||||||||||||    
T  20595728 gggagctaaaaattgatgatttagtgagaaaaatgtcaaaactcccgagagca 20595780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 20849587 - 20849535
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||| ||| ||||||| |||||||||||||||||||| |||||||    
T  20849587 gggagcttaaaagtgaagatttagtgagaaaaatgtcaaaactccggagagca 20849535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 152
Target Start/End: Complemental strand, 21698657 - 21698609
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgag 152  Q
    |||||||||||||||| ||||||| ||||||||||| ||||||||||||    
T  21698657 gggagcttaaaaatgaagatttagtgagaaaaatgtgaaaactcccgag 21698609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 156
Target Start/End: Original strand, 16883173 - 16883220
Alignment:
Q  109 cttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||||| ||||||| |||||||||||||||||| |||||||||    
T  16883173 cttaaaaatgaagatttagtgagaaaaatgtcaaaacttccgagagca 16883220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 173
Target Start/End: Original strand, 20941474 - 20941543
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcc 173  Q
    |||| ||||||||||| ||||||| |||||||||| |||||||| |||||||| |  ||||||| |||||    
T  20941474 gggaacttaaaaatgaagatttagtgagaaaaatgacaaaactctcgagagcatcctttttctgttcgcc 20941543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 20243103 - 20243051
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| ||||||| | ||||||||||||||||||||||||||    
T  20243103 gggagcttagaattgatgatttagtgcgaaaaatgtcaaaactcccgagagca 20243051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 21664726 - 21664674
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||  ||||||||||| ||||||||||||||||    
T  21664726 gggaacttaaaaatgaagatttactgagaaaaatgttaaaactcccgagagca 21664674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 30491054 - 30491106
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||| |||||||| ||| |||||    
T  30491054 gggagcttaaaaatgaagatttagtgagaaaaatatcaaaacttccgtgagca 30491106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 36917641 - 36917589
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||||| || || ||||||||||||||||||||||||||||    
T  36917641 gggagcttagaattgaggtttgagtgagaaaaatgtcaaaactcccgagagca 36917589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 20823989 - 20824048
Alignment:
Q  114 aaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcc 173  Q
    |||||| ||||||| ||||||||| |||||||||||| |||||||  ||||||| |||||    
T  20823989 aaatgaagatttagtgagaaaaatatcaaaactcccgtgagcagcctttttctgttcgcc 20824048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 156
Target Start/End: Original strand, 29554069 - 29554116
Alignment:
Q  109 cttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||||| ||||||| || |||||||||||||||| ||||||||    
T  29554069 cttaaaaatgaagatttagtgaaaaaaatgtcaaaactctcgagagca 29554116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 155
Target Start/End: Original strand, 29601881 - 29601932
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagc 155  Q
    ||||||||| || ||||| || || |||||||||||||||||||||||||||    
T  29601881 gggagcttagaattgaggtttgagtgagaaaaatgtcaaaactcccgagagc 29601932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 156
Target Start/End: Complemental strand, 43088894 - 43088851
Alignment:
Q  113 aaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||| ||||||| |||||||||| |||||||||||||||||    
T  43088894 aaaatgaagatttagtgagaaaaatgacaaaactcccgagagca 43088851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 142
Target Start/End: Complemental strand, 19336335 - 19336297
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaa 142  Q
    |||||||||||||||| ||||||| ||||||||||||||    
T  19336335 gggagcttaaaaatgaagatttagtgagaaaaatgtcaa 19336297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 156
Target Start/End: Complemental strand, 36615445 - 36615395
Alignment:
Q  106 gagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||| || ||| | ||||| ||||||||||||||||||||||||||||    
T  36615445 gagcttagaattgaagttttagtgagaaaaatgtcaaaactcccgagagca 36615395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 21921322 - 21921270
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||||| || || |||||||||||||||| |||||||||||    
T  21921322 gggagcttagaattgaggtttgagtgagaaaaatgtcaaaattcccgagagca 21921270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 24108626 - 24108678
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| | || || ||||||||||||||||||||||||||||    
T  24108626 gggagcttagaattgaagtttgagtgagaaaaatgtcaaaactcccgagagca 24108678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 49328556 - 49328504
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| | || || ||||||||||||||||||||||||||||    
T  49328556 gggagcttagaattgaagtttgagtgagaaaaatgtcaaaactcccgagagca 49328504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 138; Significance: 3e-72; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 67857 - 67692
Alignment:
Q  1 cttgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaa 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  67857 cttgatttttaaaatgttgttttaggtcgtatgttggatggttttgagtacctggacatgtatagggaggactgggcaagttgttagatcaaaaggggaa 67758  T
Q  101 ttggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttct 166  Q
    || |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  67757 ttagggagcttaaaaatgaggatttagtgagaaaaatgtcaaaactcccgagagcagctattttct 67692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 104 - 173
Target Start/End: Complemental strand, 18042 - 17973
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcc 173  Q
    ||||||||| || ||| ||||||| ||||||||||||||||||||||||||||||  ||||||| |||||    
T  18042 gggagcttagaattgaagatttagagagaaaaatgtcaaaactcccgagagcagcctttttctgttcgcc 17973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 120; Significance: 2e-61; HSPs: 3)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 2 - 237
Target Start/End: Original strand, 34284 - 34518
Alignment:
Q  2 ttgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaat 101  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||||||| |  | ||| | ||||||||  |||||| ||||||||||||| ||||    
T  34284 ttgatttttaaaatgttgttttaggtagtatgttggatggttttgagtgcctggatgtttatggagaggactgatcaagtttttagatcaaaaagagaat 34383  T
Q  102 tggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcga 201  Q
    |  |||||||||||||||||||||||  | ||||||||||||||| |||| ||||||||||||||||||||||||| |||||  |||||||| || || |    
T  34384 taaggagcttaaaaatgaggatttagtca-aaaaatgtcaaaactaccgatagcagcaattttctgctcgccacggcgaacggcttactcgccatcgcaa 34482  T
Q  202 gtagcccatttccttgagctcgccatagcgagcagt 237  Q
    |||||| ||||| ||||||| |||||||||||||||    
T  34483 gtagcctatttctttgagcttgccatagcgagcagt 34518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 45 - 97
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  45 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 97  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 104 - 154
Target Start/End: Original strand, 6204 - 6254
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagag 154  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||    
T  6204 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagag 6254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 118; Significance: 2e-60; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 2 - 235
Target Start/End: Original strand, 23620603 - 23620835
Alignment:
Q  2 ttgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaat 101  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||||||| |  | ||| | ||||||||  |||||| ||||||||||||| | ||    
T  23620603 ttgatttttaaaatgttgttttaggtagtatgttggatggttttgagtgcctggatgtttatggagaggactgatcaagtttttagatcaaaaagaggat 23620702  T
Q  102 tggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcga 201  Q
    | |||||||||||||||  ||||||| | |||||||||||||||||||||||||| || ||||||||||||||||| |||| | |||||||| |||||||    
T  23620703 tagggagcttaaaaatggagatttagtgtgaaaaatgtcaaaactcccgagagcaccatttttctgctcgccacggcgaacaacttactcgccatagcga 23620802  T
Q  202 gtagcccatttccttgagctcgccatagcgagca 235  Q
    |||||| |||| |||||| ||||| |||||||||    
T  23620803 gtagcctattttcttgagttcgcc-tagcgagca 23620835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 6 - 234
Target Start/End: Complemental strand, 17526977 - 17526749
Alignment:
Q  6 tttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggg 105  Q
    |||||||||||||||| |||| || | ||||||| |||||||||||||| |  | | ||| ||||||||||| | || ||||||||||||||| |||  |    
T  17526977 tttttaaaatgttgttataggacgaaagttggatggttttgagtgcctggatgtttttagagaggactgggccaatttttagatcaaaaaggggattacg 17526878  T
Q  106 gagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcgagtag 205  Q
    |||||||||||||| ||||||| |||||||||||||||||||| ||||||| || ||| |||||||||||||  ||| |  ||||||| |||||||||||    
T  17526877 gagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcctgagagcaccattttcctgctcgccacggcaaacaacgtactcgccatagcgagtag 17526778  T
Q  206 cccatttccttgagctcgccatagcgagc 234  Q
    ||| |||||||||||||||||||||||||    
T  17526777 cccttttccttgagctcgccatagcgagc 17526749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 156
Target Start/End: Complemental strand, 18138221 - 18138068
Alignment:
Q  3 tgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaatt 102  Q
    ||||||||||||||||||| || |  ||| ||||||| |||||||||||||  || | | ||| |||| |||||| | || |||||| |||||    |||    
T  18138221 tgatttttaaaatgttgttataagatgtaagttggatggttttgagtgcctagacgtttttagagagggctgggccaatttttagattaaaaaaatgatt 18138122  T
Q  103 ggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
     |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  18138121 agggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 18138068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 106 - 236
Target Start/End: Original strand, 9185447 - 9185566
Alignment:
Q  106 gagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcgagtag 205  Q
    |||||||| ||||| ||||||| |||||||||||||||||||||||||||| || |||  |||||||||||          ||||||| ||||||||||     
T  9185447 gagcttaagaatgaagatttagtgagaaaaatgtcaaaactcccgagagcatcattttcttgctcgccacg----------tactcgccatagcgagtaa 9185536  T
Q  206 cccatttccttgagctcgccatagcgagcag 236  Q
    ||||||| |||||| ||||||||||||||||    
T  9185537 cccattt-cttgagttcgccatagcgagcag 9185566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 19468385 - 19468333
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  19468385 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 19468333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 1593308 - 1593249
Alignment:
Q  114 aaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcc 173  Q
    |||||||||||||| ||||||||||||||||||||||||||||||  ||||||| |||||    
T  1593308 aaatgaggatttagtgagaaaaatgtcaaaactcccgagagcagcctttttctgttcgcc 1593249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 104 - 153
Target Start/End: Complemental strand, 19819458 - 19819409
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgaga 153  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  19819458 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgaga 19819409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 14615899 - 14615951
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  14615899 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 14615951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 19451836 - 19451784
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||| ||||||    
T  19451836 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccaagagca 19451784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 22798135 - 22798187
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||| ||||||||    
T  22798135 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactctcgagagca 22798187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 23105754 - 23105702
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||| |||||||||| ||||||| ||||||||||||||||||||||||||||    
T  23105754 gggagtttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 23105702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 104 - 159
Target Start/End: Complemental strand, 18786634 - 18786579
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagca 159  Q
    |||||||||||| ||| | ||||| |||||||||||||||||||||||||||||||    
T  18786634 gggagcttaaaattgaagttttagtgagaaaaatgtcaaaactcccgagagcagca 18786579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 21724377 - 21724436
Alignment:
Q  114 aaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcc 173  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||  ||||||| |||||    
T  21724377 aaatgaggatttagtgagaaaaatgtcaaaacacccgagagcagcctttttctgttcgcc 21724436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 105 - 156
Target Start/End: Complemental strand, 24721159 - 24721108
Alignment:
Q  105 ggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||||||||| ||||||| ||||||||||| ||||||||||||||||    
T  24721159 ggagcttaaaaatgaagatttagtgagaaaaatgttaaaactcccgagagca 24721108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 158
Target Start/End: Complemental strand, 17414556 - 17414503
Alignment:
Q  105 ggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagc 158  Q
    ||||||||||| ||| | ||||| ||||||||||||||||||||||||||||||    
T  17414556 ggagcttaaaattgaagttttagtgagaaaaatgtcaaaactcccgagagcagc 17414503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 67 - 156
Target Start/End: Complemental strand, 21476885 - 21476796
Alignment:
Q  67 gaggactgggcaagttgttagatcaaaaagggaattggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||||  | || |||||| ||||||   ||| |||||||||||| ||| | ||||| ||||||||||||||||||||||||||||    
T  21476885 gaggactgggacaatttttagattaaaaagatgattagggagcttaaaattgaagttttagtgagaaaaatgtcaaaactcccgagagca 21476796  T

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Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 18315593 - 18315645
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||| ||| | ||||| ||||||||||||||||||||||||||||    
T  18315593 gggagcttaaaattgaagttttagtgagaaaaatgtcaaaactcccgagagca 18315645  T

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Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 19588198 - 19588250
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| |||||||||| || ||||| ||||||||||||||||||||||||||||    
T  19588198 gggaacttaaaaatgtggttttagtgagaaaaatgtcaaaactcccgagagca 19588250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 22907521 - 22907469
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| ||||||| ||||||||||||||||||||||||||||    
T  22907521 gggagcttagaattgatgatttagtgagaaaaatgtcaaaactcccgagagca 22907469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 26418278 - 26418330
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||| ||| | ||||| ||||||||||||||||||||||||||||    
T  26418278 gggagcttaaaattgaagttttagtgagaaaaatgtcaaaactcccgagagca 26418330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 156
Target Start/End: Original strand, 14374942 - 14374989
Alignment:
Q  109 cttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||||||| ||||| ||||||||||||||||||||||| ||||    
T  14374942 cttaaaaatgaggttttagtgagaaaaatgtcaaaactcccgatagca 14374989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 156
Target Start/End: Original strand, 23233035 - 23233082
Alignment:
Q  109 cttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  23233035 cttaaaaatgaagatttagtgagaaaaatgtcaaaactccagagagca 23233082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 933903 - 933955
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| ||||||| |||||||||||||||||||| |||||||    
T  933903 gggagcttagaattgatgatttagtgagaaaaatgtcaaaactcctgagagca 933955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 13940956 - 13940905
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||||| ||||||||||||||||||||    
T  13940956 gggaacttaaaaatgaagatttagtgagaaaa-tgtcaaaactcccgagagca 13940905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 19727173 - 19727121
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||  | ||| ||||||| ||||||||||||||||||||||||||||    
T  19727173 gggagcttaggattgatgatttagtgagaaaaatgtcaaaactcccgagagca 19727121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 21470347 - 21470295
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||| ||| | ||||| ||| ||||||||||||||||||||||||    
T  21470347 gggagcttaaaattgaagttttagtgaggaaaatgtcaaaactcccgagagca 21470295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 23234542 - 23234594
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| | ||||| ||||||||||||||||||||||||||||    
T  23234542 gggagcttagaattgatgttttagtgagaaaaatgtcaaaactcccgagagca 23234594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 27767884 - 27767832
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||||| || || ||||||||||||||||||||||||||||    
T  27767884 gggagcttagaattgaggtttgagtgagaaaaatgtcaaaactcccgagagca 27767832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 110 - 153
Target Start/End: Complemental strand, 2708925 - 2708882
Alignment:
Q  110 ttaaaaatgaggatttagggagaaaaatgtcaaaactcccgaga 153  Q
    |||||||||| ||||||| |||||||||||| ||||||||||||    
T  2708925 ttaaaaatgaagatttagtgagaaaaatgtcgaaactcccgaga 2708882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 187 - 236
Target Start/End: Complemental strand, 21470274 - 21470225
Alignment:
Q  187 tactcgctatagcgagtagcccatttccttgagctcgccatagcgagcag 236  Q
    ||||||| |||||||||| ||||||| || ||| ||||||||||||||||    
T  21470274 tactcgccatagcgagtaacccattttctggagttcgccatagcgagcag 21470225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 156
Target Start/End: Complemental strand, 25773271 - 25773183
Alignment:
Q  67 gaggactgggcaagttgttagatcaaaaagggaattggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||||  | || |||||| ||||||   ||| |||||||||||| ||| | ||||| ||||||| ||||||||||||||||||||    
T  25773271 gaggactgggacaatttttagattaaaaagatgattagggagcttaaaattgaagttttagtgagaaaa-tgtcaaaactcccgagagca 25773183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 173
Target Start/End: Original strand, 28289814 - 28289882
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcc 173  Q
    ||||||||| || ||| ||||||| ||||||| |||| ||||||||||||||| || ||||||| |||||    
T  28289814 gggagcttagaattgatgatttagtgagaaaa-tgtcgaaactcccgagagcaccacttttctgttcgcc 28289882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 141
Target Start/End: Original strand, 28359463 - 28359500
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtca 141  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  28359463 gggagcttagaaatgaggatttagtgagaaaaatgtca 28359500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 125
Target Start/End: Complemental strand, 1584841 - 1584793
Alignment:
Q  77 caagttgttagatcaaaaagggaattggggagcttaaaaatgaggattt 125  Q
    |||||| || |||||||||||||||| || |||||||||||| ||||||    
T  1584841 caagtttttggatcaaaaagggaattaggaagcttaaaaatggggattt 1584793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 12446827 - 12446879
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| | || || ||||||||||||||||||||||||||||    
T  12446827 gggagcttagaattgaagtttgagtgagaaaaatgtcaaaactcccgagagca 12446879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 13127907 - 13127959
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||||| || || ||||||||||||||||||||| ||||||    
T  13127907 gggagcttagaattgaggtttgagcgagaaaaatgtcaaaactcccaagagca 13127959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 17207369 - 17207421
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| | || || ||||||||||||||||||||||||||||    
T  17207369 gggagcttagaattgaagtttgagtgagaaaaatgtcaaaactcccgagagca 17207421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 117; Significance: 1e-59; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 30205988 - 30206212
Alignment:
Q  1 cttgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaa 100  Q
    ||||||||||||||||||||||||||| |||||||||||  ||||||||||||| |  | ||| | ||||||||  |||||| ||||||||||||| | |    
T  30205988 cttgatttttaaaatgttgttttaggtagtatgttggatgattttgagtgcctggatgtttatggagaggactgatcaagtttttagatcaaaaagagga 30206087  T
Q  101 ttggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcg 200  Q
    || |||||||||||||||| ||||||| |||||||||||||||||||||||||||| || ||||||||||||||||| |||| |  ||||||| ||||||    
T  30206088 ttagggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcaccatttttctgctcgccacggcgaacaacatactcgccatagcg 30206187  T
Q  201 agtagcccatttccttgagctcgcc 225  Q
    ||||||| |||| |||||| |||||    
T  30206188 agtagcctattttcttgagttcgcc 30206212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 6 - 212
Target Start/End: Original strand, 11325409 - 11325615
Alignment:
Q  6 tttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggg 105  Q
    |||| ||||||||||| |||| |||  ||||||| |||||||||||||| |  | | ||| |||||||| ||||||| ||||||||||||||| ||| ||    
T  11325409 ttttcaaaatgttgttataggacgtgagttggatggttttgagtgcctggatgtttttagagaggactgagcaagtttttagatcaaaaaggggattagg 11325508  T
Q  106 gagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcgagtag 205  Q
    |||||||||||||| ||||||| || ||||||||||||||||||||||||| || |||||||||| |||||| |||| | |||||||| |||||||||||    
T  11325509 gagcttaaaaatgaagatttagtgaaaaaaatgtcaaaactcccgagagcatcatttttctgctctccacggcgaacaacttactcgccatagcgagtag 11325608  T
Q  206 cccattt 212  Q
    |||||||    
T  11325609 cccattt 11325615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 7 - 235
Target Start/End: Complemental strand, 15232860 - 15232642
Alignment:
Q  7 ttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattgggg 106  Q
    ||||||| ||||| | || | |||| ||| ||| |||||||||||||| | || | ||| ||||||| ||  | || | |||| ||||||   ||| |||    
T  15232860 ttttaaattgttgctataagacgtaagttagatggttttgagtgcctggatatttttagagaggactaggacaattttcagattaaaaagatgattaggg 15232761  T
Q  107 agcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttc-tgctcgccacggtgaacgaattactcgctatagcgagtag 205  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||||| || ||||| || ||||||||          ||||||| |||||||||||    
T  15232760 agcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcaccatttttcttgatcgccacg----------tactcgccatagcgagtag 15232671  T
Q  206 cccatttccttgagctcgccatagcgagca 235  Q
    | ||||| |||||| |||||||||||||||    
T  15232670 ctcattt-cttgagttcgccatagcgagca 15232642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 7 - 235
Target Start/End: Complemental strand, 15238728 - 15238510
Alignment:
Q  7 ttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattgggg 106  Q
    ||||||| ||||| | || | |||| ||| ||| |||||||||||||| | || | ||| ||||||| ||  | || | |||| ||||||   ||| |||    
T  15238728 ttttaaattgttgctataagacgtaagttagatggttttgagtgcctggatatttttagagaggactaggacaattttcagattaaaaagatgattaggg 15238629  T
Q  107 agcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttc-tgctcgccacggtgaacgaattactcgctatagcgagtag 205  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||||| || ||||| || ||||||||          ||||||| |||||||||||    
T  15238628 agcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcaccatttttcttgatcgccacg----------tactcgccatagcgagtag 15238539  T
Q  206 cccatttccttgagctcgccatagcgagca 235  Q
    | ||||| |||||| |||||||||||||||    
T  15238538 ctcattt-cttgagttcgccatagcgagca 15238510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 24284046 - 24284098
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  24284046 gggagcttaaaaatgaggatttagtgagaaaaatgtcaaaactcccgagagca 24284098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 15954578 - 15954640
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttct 166  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||||| || ||||||    
T  15954578 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcaccatttttct 15954640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 12153415 - 12153363
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  12153415 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 12153363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 12363933 - 12363881
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  12363933 gggaacttaaaaatgaagatttagggagaaaaatgtcaaaactcccgagagca 12363881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 104 - 152
Target Start/End: Original strand, 13036600 - 13036648
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgag 152  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  13036600 gggagcttaaaaatgaggatttagtgagaaaaatgtcaaaactcccgag 13036648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 15011535 - 15011587
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  15011535 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 15011587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 16823426 - 16823478
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  16823426 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 16823478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 17496686 - 17496634
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  17496686 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 17496634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 42109745 - 42109693
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  42109745 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 42109693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 165
Target Start/End: Original strand, 12855374 - 12855536
Alignment:
Q  3 tgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaatt 102  Q
    ||||||| ||| ||||||| || |  ||| ||||| | ||||||||||||||||  | | ||| ||||||| ||  | || |||||| ||||||   |||    
T  12855374 tgattttcaaattgttgttataagatgtaagttggttagttttgagtgcctgaatgtttttagagaggactaggacaatttttagattaaaaagatgatt 12855473  T
Q  103 ggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttc 165  Q
     |||||||||||||||| ||||||| |||||||||| |||||||||| |||||| || |||||    
T  12855474 agggagcttaaaaatgaagatttagtgagaaaaatggcaaaactcccaagagcaccatttttc 12855536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 104 - 173
Target Start/End: Original strand, 10597296 - 10597365
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcc 173  Q
    ||||||||| || ||| ||||||| ||||||||||||||||||||||||||||||  ||||||| |||||    
T  10597296 gggagcttagaattgaagatttagtgagaaaaatgtcaaaactcccgagagcagcctttttctgttcgcc 10597365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 2269877 - 2269929
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  2269877 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 2269929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 11305386 - 11305438
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  11305386 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 11305438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 11644433 - 11644485
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  11644433 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 11644485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 11939528 - 11939580
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  11939528 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 11939580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 12355598 - 12355650
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  12355598 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 12355650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 12362147 - 12362199
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  12362147 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 12362199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 13692488 - 13692436
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  13692488 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 13692436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 18128186 - 18128238
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  18128186 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 18128238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 105 - 156
Target Start/End: Original strand, 15934574 - 15934625
Alignment:
Q  105 ggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||||||||| ||||||| ||||||||| ||||||||||||||||||    
T  15934574 ggagcttaaaaatgaagatttagtgagaaaaatatcaaaactcccgagagca 15934625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 104 - 154
Target Start/End: Original strand, 14288656 - 14288706
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagag 154  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||    
T  14288656 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagag 14288706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 104 - 158
Target Start/End: Original strand, 17198665 - 17198719
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagc 158  Q
    |||| ||| ||||||||||||||| ||||||||||||||||||||||| ||||||    
T  17198665 gggaacttgaaaatgaggatttagtgagaaaaatgtcaaaactcccgaaagcagc 17198719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 173
Target Start/End: Original strand, 16829586 - 16829655
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcc 173  Q
    ||||||||| || ||| ||||||| |||||||||||||||||||||||||||| ||  |||||| |||||    
T  16829586 gggagcttagaattgatgatttagtgagaaaaatgtcaaaactcccgagagcaccatatttctgttcgcc 16829655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 173
Target Start/End: Original strand, 16838109 - 16838178
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcc 173  Q
    ||||||||| || ||| ||||||| |||||||||||||||||||||||||||| ||  |||||| |||||    
T  16838109 gggagcttagaattgatgatttagtgagaaaaatgtcaaaactcccgagagcaccatatttctgttcgcc 16838178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 11964554 - 11964606
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||||||||||||||| ||||||||||    
T  11964554 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaacacccgagagca 11964606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 12479322 - 12479374
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| | ||||||||||||||||||||||||||    
T  12479322 gggaacttaaaaatgaagatttagtgggaaaaatgtcaaaactcccgagagca 12479374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 14293270 - 14293218
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| ||||||| ||||||||||||||||||||||||||||    
T  14293270 gggagcttagaattgaagatttagtgagaaaaatgtcaaaactcccgagagca 14293218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 14298897 - 14298845
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| ||||||| ||||||||||||||||||||||||||||    
T  14298897 gggagcttagaattgaagatttagtgagaaaaatgtcaaaactcccgagagca 14298845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 112 - 156
Target Start/End: Complemental strand, 15519015 - 15518971
Alignment:
Q  112 aaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||    
T  15519015 aaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 15518971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 18135956 - 18136008
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||  ||||||||||||||||||||||||||||    
T  18135956 gggaacttaaaaatgaagatttaatgagaaaaatgtcaaaactcccgagagca 18136008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 18718763 - 18718815
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| ||||||| ||||||||||||||||||||||||||||    
T  18718763 gggagcttagaattgaagatttagtgagaaaaatgtcaaaactcccgagagca 18718815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 105 - 156
Target Start/End: Complemental strand, 12274815 - 12274764
Alignment:
Q  105 ggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||||||||| ||||||| |||||||||||| |||||||| ||||||    
T  12274815 ggagcttaaaaatgaagatttagtgagaaaaatgtcgaaactccctagagca 12274764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 156
Target Start/End: Complemental strand, 12202837 - 12202791
Alignment:
Q  110 ttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||| ||||||| |||||||||||||||||||| |||||||    
T  12202837 ttaaaaatgaagatttagtgagaaaaatgtcaaaactcctgagagca 12202791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 156
Target Start/End: Original strand, 12961024 - 12961069
Alignment:
Q  111 taaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| ||||||| |||||||||||||||||| |||||||||    
T  12961024 taaaaatgaagatttagtgagaaaaatgtcaaaacttccgagagca 12961069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 12255685 - 12255633
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || | | ||||||| ||||||||||||||||||||||||||||    
T  12255685 gggagcttagaatttaagatttagtgagaaaaatgtcaaaactcccgagagca 12255633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 12256130 - 12256078
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || | | ||||||| ||||||||||||||||||||||||||||    
T  12256130 gggagcttagaatttaagatttagtgagaaaaatgtcaaaactcccgagagca 12256078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 14652357 - 14652409
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| ||||||| ||||||||||||||||||||| ||||||    
T  14652357 gggagcttagaattgatgatttagtgagaaaaatgtcaaaactccctagagca 14652409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 18961468 - 18961416
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| | ||||| ||||||||||||||||||||||||||||    
T  18961468 gggagcttagaattgatgttttagtgagaaaaatgtcaaaactcccgagagca 18961416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 35985247 - 35985195
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| | | ||| ||||||||||||||||||| ||||||||    
T  35985247 gggagcttaaaaatgaagttctagtgagaaaaatgtcaaaactctcgagagca 35985195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 49163674 - 49163622
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||| ||| | || || ||||||||||||||||||||||||||||    
T  49163674 gggagcttaaaattgaagtttgagtgagaaaaatgtcaaaactcccgagagca 49163622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 16349140 - 16349079
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttct 166  Q
    ||||||||| || ||| ||||||| |||||||||||| ||||||||||||||| || ||||||    
T  16349140 gggagcttagaattgatgatttagtgagaaaaatgtc-aaactcccgagagcaccatttttct 16349079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 154
Target Start/End: Original strand, 20376883 - 20376933
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagag 154  Q
    ||||||||| || ||||| || || ||||||||||||||||||||||||||    
T  20376883 gggagcttagaattgaggtttgagtgagaaaaatgtcaaaactcccgagag 20376933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 173
Target Start/End: Original strand, 16382523 - 16382591
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcc 173  Q
    ||||||||| || ||| ||||| | |||||||||||| ||||||||||||||| || ||||||| |||||    
T  16382523 gggagcttagaattgatgatttcgtgagaaaaatgtc-aaactcccgagagcaccatttttctgttcgcc 16382591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 152
Target Start/End: Complemental strand, 12419967 - 12419919
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgag 152  Q
    ||||||||| || ||| | ||||| ||||||||||||||||||||||||    
T  12419967 gggagcttagaattgaagttttagtgagaaaaatgtcaaaactcccgag 12419919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 15375152 - 15375100
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||||| || || |||||||||||||||| |||||||||||    
T  15375152 gggagcttagaattgaggtttgagtgagaaaaatgtcaaaattcccgagagca 15375100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 46070752 - 46070804
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || || || || || ||||||||||||||||||||||||||||    
T  46070752 gggagcttagaattggggtttgagtgagaaaaatgtcaaaactcccgagagca 46070804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388 (Bit Score: 116; Significance: 4e-59; HSPs: 1)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 6 - 237
Target Start/End: Original strand, 15488 - 15719
Alignment:
Q  6 tttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggg 105  Q
    |||| |||| |||||| |||| |||  |||||||  ||||||||||||| |  | ||||| ||||||||| |||||| ||||||||||||| | ||| ||    
T  15488 ttttcaaaacgttgttataggacgtgggttggatgtttttgagtgcctggatgtttatagagaggactggtcaagtttttagatcaaaaagaggattagg 15587  T
Q  106 gagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcgagtag 205  Q
    |||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |||| | ||||| || |||||||||||    
T  15588 gagcttgaaaatgaggatttagtgagaaaaatgtcaaaactcccaagagcagcaattttctgctcgccacggcgaacaacttacttgccatagcgagtag 15687  T
Q  206 cccatttccttgagctcgccatagcgagcagt 237  Q
    || |||| |||||||||||| |||||||||||    
T  15688 cctattttcttgagctcgccttagcgagcagt 15719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0860 (Bit Score: 114; Significance: 6e-58; HSPs: 1)
Name: scaffold0860
Description:

Target: scaffold0860; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 6 - 235
Target Start/End: Complemental strand, 938 - 710
Alignment:
Q  6 tttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggg 105  Q
    ||||||||||||||||||| || ||||||||||| |||||||||||||| |  | ||||| ||||||||  |||||| ||| ||||||||| | ||| ||    
T  938 tttttaaaatgttgttttaagtagtatgttggatggttttgagtgcctggatgtttatagagaggactgatcaagtttttatatcaaaaagaggattagg 839  T
Q  106 gagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcgagtag 205  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||||| || ||||||||||||||||| |||| | |||||||| ||||||||||     
T  838 gagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcaccatttttctgctcgccacggcgaacaacttactcgccatagcgagtat 739  T
Q  206 cccatttccttgagctcgccatagcgagca 235  Q
    || |||| |||||| ||||| |||||||||    
T  738 cctattttcttgagttcgcc-tagcgagca 710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 112; Significance: 9e-57; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 6 - 237
Target Start/End: Original strand, 21980407 - 21980638
Alignment:
Q  6 tttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggg 105  Q
    |||| ||| ||||||| |||| |||  ||||||| |||||||||||||| | ||||||||  |||||| | |||||| || |||||||||||| ||  ||    
T  21980407 ttttcaaattgttgttataggacgtgggttggatggttttgagtgcctggatatgtatagataggactagtcaagtttttggatcaaaaaggggatcagg 21980506  T
Q  106 gagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcgagtag 205  Q
    |||||||||||||||||||||| | ||||||| |||||||||||||||||||| |||||||||||||||||  |   || |||||||| |||||||||||    
T  21980507 gagcttaaaaatgaggatttagtgtgaaaaatatcaaaactcccgagagcagctattttctgctcgccacgacgtgtgacttactcgccatagcgagtag 21980606  T
Q  206 cccatttccttgagctcgccatagcgagcagt 237  Q
    |||||||||||||||||||||| |||||||||    
T  21980607 cccatttccttgagctcgccatcgcgagcagt 21980638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 6 - 177
Target Start/End: Original strand, 21553773 - 21553944
Alignment:
Q  6 tttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggg 105  Q
    |||| ||||||| ||| |||| |||  ||||||| |||||||||||||| | |||||||| ||||| |||||||||| || ||| |||||||| | | ||    
T  21553773 ttttcaaaatgtcgttataggacgtgggttggatggttttgagtgcctggatatgtatagagaggattgggcaagtttttggatgaaaaaggggactagg 21553872  T
Q  106 gagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacgg 177  Q
    |||||||||||||||||||||| | |||||||||||||||||| ||||| ||| ||||||||||||||||||    
T  21553873 gagcttaaaaatgaggatttagtgtgaaaaatgtcaaaactcctgagagtagctattttctgctcgccacgg 21553944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 3 - 235
Target Start/End: Complemental strand, 7785853 - 7785622
Alignment:
Q  3 tgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaatt 102  Q
    ||||||||||| ||||||| || | |||| ||||||| ||||||| || | | |  | | ||| ||||||||| | | || |||||||||||||   |||    
T  7785853 tgatttttaaattgttgttataagacgtaagttggatggttttgaatgaccggatgtttttagagaggactggaccaatttttagatcaaaaagatgatt 7785754  T
Q  103 ggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttc-tgctcgccacggtgaacgaattactcgctatagcga 201  Q
     |||||||||||||||| ||||||| ||||||||||||||||||| |||||||| |||||||| |||||||||||| |||| |   |||||| || ||||    
T  7785753 agggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactctcgagagca-caattttcctgctcgccacggcgaacaacgaactcgccatcgcga 7785655  T
Q  202 gtagcccatttccttgagctcgccatagcgagca 235  Q
    ||||||| ||| ||| |||||||||| |||||||    
T  7785654 gtagccc-ttttcttcagctcgccattgcgagca 7785622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 104 - 235
Target Start/End: Complemental strand, 26706943 - 26706822
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttc-tgctcgccacggtgaacgaattactcgctatagcgag 202  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||||| || ||||| || ||||||||          ||||||| ||||||||    
T  26706943 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcaccatttttcttgttcgccacg----------tactcgccatagcgag 26706854  T
Q  203 tagcccatttccttgagctcgccatagcgagca 235  Q
    |||| ||||| |||||| |||||||||||||||    
T  26706853 tagctcattt-cttgagttcgccatagcgagca 26706822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 104 - 235
Target Start/End: Complemental strand, 26976677 - 26976556
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttc-tgctcgccacggtgaacgaattactcgctatagcgag 202  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||||| || ||||| || ||||||||          ||||||| ||||||||    
T  26976677 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcaccatttttcttgttcgccacg----------tactcgccatagcgag 26976588  T
Q  203 tagcccatttccttgagctcgccatagcgagca 235  Q
    |||| ||||| |||||| |||||||||||||||    
T  26976587 tagctcattt-cttgagttcgccatagcgagca 26976556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 102 - 166
Target Start/End: Original strand, 15193613 - 15193677
Alignment:
Q  102 tggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttct 166  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||||||||| || ||||||    
T  15193613 tggggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcatcatttttct 15193677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 18819469 - 18819417
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  18819469 gggagcttaaaaatgaggatttagtgagaaaaatgtcaaaactcccgagagca 18819417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 21901476 - 21901528
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  21901476 gggagcttaaaaatgaggatttagtgagaaaaatgtcaaaactcccgagagca 21901528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 104 - 173
Target Start/End: Original strand, 22232334 - 22232403
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcc 173  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||  ||||||| |||||    
T  22232334 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcagcctttttctgttcgcc 22232403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 104 - 173
Target Start/End: Original strand, 22237487 - 22237556
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcc 173  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||  ||||||| |||||    
T  22237487 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcagcctttttctgatcgcc 22237556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 427751 - 427699
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  427751 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 427699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 109 - 173
Target Start/End: Original strand, 757917 - 757981
Alignment:
Q  109 cttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcc 173  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||||||  ||||||| |||||    
T  757917 cttagaaatgaggatttagtgagaaaaatgtcaaaactcccgagagcagcctttttctgttcgcc 757981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 21495427 - 21495375
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  21495427 gggagcttataaatgaggatttagtgagaaaaatgtcaaaactcccgagagca 21495375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 21889116 - 21889064
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  21889116 gggagcttaaaaatgcggatttagtgagaaaaatgtcaaaactcccgagagca 21889064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 23443797 - 23443849
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  23443797 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 23443849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 105 - 156
Target Start/End: Original strand, 23561209 - 23561260
Alignment:
Q  105 ggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  23561209 ggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 23561260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 106 - 156
Target Start/End: Complemental strand, 20843594 - 20843544
Alignment:
Q  106 gagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  20843594 gagcttaaaaatgatgatttagtgagaaaaatgtcaaaactcccgagagca 20843544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 84 - 158
Target Start/End: Original strand, 22500166 - 22500240
Alignment:
Q  84 ttagatcaaaaagggaattggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagc 158  Q
    |||||||||||||   | |||||| |||  |||||||||||||| ||||||||||||||||||||||||||||||    
T  22500166 ttagatcaaaaagttgaatggggaacttggaaatgaggatttagtgagaaaaatgtcaaaactcccgagagcagc 22500240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 17022394 - 17022446
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| |||||||||||||||||| |||||||||    
T  17022394 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactaccgagagca 17022446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 21830067 - 21830015
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  21830067 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 21830015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 22380006 - 22379954
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  22380006 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 22379954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 107 - 155
Target Start/End: Complemental strand, 25014114 - 25014066
Alignment:
Q  107 agcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagc 155  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  25014114 agcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagc 25014066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 6404113 - 6404165
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| |||||||||||||||||| |||||||||    
T  6404113 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaacttccgagagca 6404165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 104 - 158
Target Start/End: Original strand, 27635489 - 27635543
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagc 158  Q
    ||||||||| || ||| | ||||| ||||||||||||||||||||||||||||||    
T  27635489 gggagcttagaattgaagttttagtgagaaaaatgtcaaaactcccgagagcagc 27635543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 10035678 - 10035625
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaa-tgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| || ||||| ||||||||||||||||||||    
T  10035678 gggagcttaaaaatgaagatttagtgaaaaaaaatgtcaaaactcccgagagca 10035625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 153
Target Start/End: Complemental strand, 20938161 - 20938112
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgaga 153  Q
    ||||||||| || ||| ||||||| |||||||||||||||||||||||||    
T  20938161 gggagcttagaattgatgatttagtgagaaaaatgtcaaaactcccgaga 20938112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 156
Target Start/End: Original strand, 19801540 - 19801583
Alignment:
Q  113 aaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||| ||||||| ||||||||||||||||||||||| ||||    
T  19801540 aaaatgaagatttagtgagaaaaatgtcaaaactcccgaaagca 19801583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 165
Target Start/End: Complemental strand, 20990824 - 20990763
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttc 165  Q
    ||||||||| || ||| | || || |||||||||||||||||||||||||||| | ||||||    
T  20990824 gggagcttagaattgaagtttgagtgagaaaaatgtcaaaactcccgagagcacctattttc 20990763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 5337989 - 5338041
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| | || || ||||||||||||||||||||||||||||    
T  5337989 gggagcttagaattgaagtttgagtgagaaaaatgtcaaaactcccgagagca 5338041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 156
Target Start/End: Original strand, 22312462 - 22312494
Alignment:
Q  124 ttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||||||||||||||||||||    
T  22312462 ttagtgagaaaaatgtcaaaactcccgagagca 22312494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 23075927 - 23075979
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| | || || ||||||||||||||||||||||||||||    
T  23075927 gggagcttagaattgaagtttgagtgagaaaaatgtcaaaactcccgagagca 23075979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 24058118 - 24058066
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| | || || ||||||||||||||||||||||||||||    
T  24058118 gggagcttagaattgaagtttgagtgagaaaaatgtcaaaactcccgagagca 24058066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 25420344 - 25420292
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| | || || ||||||||||||||||||||||||||||    
T  25420344 gggagcttagaattgaagtttgagtgagaaaaatgtcaaaactcccgagagca 25420292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 39608508 - 39608560
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| | || || ||||||||||||||||||||||||||||    
T  39608508 gggagcttagaattgaagtttgagtgagaaaaatgtcaaaactcccgagagca 39608560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0500 (Bit Score: 110; Significance: 1e-55; HSPs: 1)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 2 - 235
Target Start/End: Original strand, 11088 - 11319
Alignment:
Q  2 ttgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaat 101  Q
    ||||||||||||||||||||| |||| ||||||||||| |||||||||||||  |  | ||| | ||||||||  |||||| ||||||||||||| | ||    
T  11088 ttgatttttaaaatgttgttt-aggtagtatgttggatggttttgagtgcctagatgtttatggagaggactgatcaagtttttagatcaaaaagaggat 11186  T
Q  102 tggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcga 201  Q
    | |||||||||||||||| ||||||| |||||||||||||||||||||||||||| || |||||||||||||| || |||| | |||||||| |||||||    
T  11187 tagggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcaccatttttctgctcgccaaggagaacaacttactcgccatagcga 11286  T
Q  202 gtagcccatttccttgagctcgccatagcgagca 235  Q
    |||||| |||| |||||| ||||| |||||||||    
T  11287 gtagcctattttcttgagttcgcc-tagcgagca 11319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556 (Bit Score: 105; Significance: 1e-52; HSPs: 2)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 77 - 237
Target Start/End: Complemental strand, 10253 - 10094
Alignment:
Q  77 caagttgttagatcaaaaagggaattggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacg 176  Q
    |||||| ||||||||||||| | ||| |||||||||||||||| |||||||  | |||| ||||||||||||||||||||||||||||||||||||||||    
T  10253 caagtttttagatcaaaaagaggattagggagcttaaaaatgaagatttagtcacaaaa-tgtcaaaactcccgagagcagcaattttctgctcgccacg 10155  T
Q  177 gtgaacgaattactcgctatagcgagtagcccatttccttgagctcgccatagcgagcagt 237  Q
    | |||||| |||||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  10154 gcgaacgacttactcgccatagcgagtagcccatttccttgagctcgccatcgcgagcagt 10094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 4622 - 4674
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  4622 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcctgagagca 4674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 104; Significance: 6e-52; HSPs: 2)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 6 - 237
Target Start/End: Complemental strand, 8192 - 7961
Alignment:
Q  6 tttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggg 105  Q
    |||| ||||||||||| |||| |||  |||||||  ||||||||||||| |  | ||||| ||||||||||||| || || |||||| ||    ||| ||    
T  8192 ttttcaaaatgttgttataggacgtgggttggatgtttttgagtgcctggatgtttatagagaggactgggcaattttttggatcaagaaaaagattagg 8093  T
Q  106 gagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcgagtag 205  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||||||   |||||||||||||||||| ||| || |||||||| |||||||||||    
T  8092 gagcttaaaaatgaggatttagtgtgaaaaatgtcaaaactcccgagagcaattattttctgctcgccacggcgaatgacttactcgccatagcgagtag 7993  T
Q  206 cccatttccttgagctcgccatagcgagcagt 237  Q
    ||| |||||||||||||||||| |||||||||    
T  7992 cccttttccttgagctcgccatcgcgagcagt 7961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 33 - 166
Target Start/End: Original strand, 6549 - 6682
Alignment:
Q  33 gttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggggagcttaaaaatgaggatttagggaga 132  Q
    ||||||| ||||||||||||||||  | | ||| |||||||| |  | || |||||| ||||||   | | |||||||||||||||| ||||||| ||||    
T  6549 gttggatagttttgagtgcctgaatgtttttagagaggactgagacaatttttagattaaaaagatgaatagggagcttaaaaatgaagatttagtgaga 6648  T
Q  133 aaaatgtcaaaactcccgagagcagcaattttct 166  Q
    |||||||||||||||| ||||||| || ||||||    
T  6649 aaaatgtcaaaactcctgagagcaccatttttct 6682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 102; Significance: 9e-51; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 6 - 235
Target Start/End: Complemental strand, 5142 - 4914
Alignment:
Q  6 tttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggg 105  Q
    ||||||||||||||||||| || ||||||||||| |||||||||||||| |  | ||||| |||||| |  |||||| ||||||||||||| | |||  |    
T  5142 tttttaaaatgttgttttaagtagtatgttggatggttttgagtgcctggatgtttatagagaggacggatcaagtttttagatcaaaaagaggattaag 5043  T
Q  106 gagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcgagtag 205  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||||| || |||| |||||||||||| |||  | |||||||| |||| ||||||    
T  5042 gagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcaccatttttttgctcgccacggcgaataacttactcgccatagagagtag 4943  T
Q  206 cccatttccttgagctcgccatagcgagca 235  Q
    || |||| |||||| ||||| |||||||||    
T  4942 cctattttcttgagttcgcc-tagcgagca 4914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 97; Significance: 8e-48; HSPs: 2)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 6 - 170
Target Start/End: Original strand, 26346 - 26510
Alignment:
Q  6 tttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggg 105  Q
    |||| |||||||||||||||| ||| |||||||| |||||||||||||  |||||||| | |||| ||||||||||| ||  ||||||||||||||| ||    
T  26346 ttttcaaaatgttgttttaggacgtgtgttggatggttttgagtgcctagacatgtatggagagggctgggcaagtttttgtatcaaaaagggaattagg 26445  T
Q  106 gagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctc 170  Q
    ||||||||||||| |||||||| | |||||||||||||||||||||||||||| |||||||||||    
T  26446 gagcttaaaaatggggatttagtgtgaaaaatgtcaaaactcccgagagcagctattttctgctc 26510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 198 - 237
Target Start/End: Original strand, 26517 - 26556
Alignment:
Q  198 gcgagtagcccatttccttgagctcgccatagcgagcagt 237  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  26517 gcgagttgcccatttccttgagctcgccatagcgagcagt 26556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 3 - 235
Target Start/End: Original strand, 31810 - 32044
Alignment:
Q  3 tgatttttaaaatgttgttttaggtcgtatgttggatcgttt--tgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaa 100  Q
    ||||||||||||||||||| || | |||| ||||||| ||||  |||||||||| |  | | | | ||||||||||| | || |||||| |||||    |    
T  31810 tgatttttaaaatgttgttataagacgtaagttggatggtttgttgagtgcctggatgtttttggagaggactgggccaatttttagattaaaaatatga 31909  T
Q  101 ttggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcg 200  Q
    || |||| ||||||||||| ||||||| |||||||||||||||||||||||||||| || ||||||||||||||||| |||| | |||||||  ||||||    
T  31910 ttagggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcaccatttttctgctcgccacggcgaacaacttactcgtcatagcg 32009  T
Q  201 agtagcccatttccttgagctcgccatagcgagca 235  Q
    ||||||| |||| |||||| |||||||||||||||    
T  32010 agtagcctattttcttgagttcgccatagcgagca 32044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 87; Significance: 8e-42; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 67 - 237
Target Start/End: Original strand, 182487 - 182657
Alignment:
Q  67 gaggactgggcaagttgttagatcaaaaagggaattggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttct 166  Q
    ||||||||||| | || ||||||||||||||| ||| |||||||||||||||| ||||||| |||||||||||||||||||||||||||| ||  || ||    
T  182487 gaggactgggctaatttttagatcaaaaaggggattagggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcaccatcttcct 182586  T
Q  167 gctcgccacggtgaacgaattactcgctatagcgagtagcccatttccttgagctcgccatagcgagcagt 237  Q
    ||| |||||   |||| | |||||||| |||||||||||||| | |||||||||||||||| |||||||||    
T  182587 gcttgccacaacgaacaacttactcgccatagcgagtagcccttctccttgagctcgccatcgcgagcagt 182657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 6 - 234
Target Start/End: Complemental strand, 189421 - 189193
Alignment:
Q  6 tttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggg 105  Q
    |||| ||||||||||| |||| | |  ||||||| |||||||||||||| |  | | ||| |||||||| ||||||| ||||||||||||||  ||| ||    
T  189421 ttttcaaaatgttgttataggacatgagttggatggttttgagtgcctggatgtatttagagaggactgtgcaagtttttagatcaaaaaggagattagg 189322  T
Q  106 gagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcgagtag 205  Q
    ||| |||||||||| ||||||  |||||||| ||||||||||| ||||||| || ||||||||||||| ||| |||| | |||||||| |||| ||||||    
T  189321 gagattaaaaatgaagatttactgagaaaaaagtcaaaactcctgagagcaccatttttctgctcgccgcggcgaacaacttactcgccatagtgagtag 189222  T
Q  206 cccatttccttgagctcgccatagcgagc 234  Q
    ||| ||| ||  |||||||||||||||||    
T  189221 ccctttttctgaagctcgccatagcgagc 189193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0381 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 88 - 235
Target Start/End: Original strand, 13471 - 13617
Alignment:
Q  88 atcaaaaagggaattggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaatt 187  Q
    ||||||||| | ||| |||||||||||||||| ||||||| |||||||||||||||||||||||||||| || |||||||||||||  ||||||| | ||    
T  13471 atcaaaaagaggattagggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcaccatttttctgctcgcctaggtgaacaactt 13570  T
Q  188 actcgctatagcgagtagcccatttccttgagctcgccatagcgagca 235  Q
    |||||| ||||||||||||| |||| |||||| ||||| |||||||||    
T  13571 actcgccatagcgagtagcctattttcttgagttcgcc-tagcgagca 13617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 3 - 235
Target Start/End: Original strand, 2221 - 2452
Alignment:
Q  3 tgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaatt 102  Q
    ||||||||||||||||||| || | |||| ||||||| |||| ||||||||| |  | | ||| ||||||||||| | || |||||| |||| |    ||    
T  2221 tgatttttaaaatgttgttataagacgtaagttggatggtttagagtgcctggatgtttttagagaggactgggccaatttttagattaaaatgatgttt 2320  T
Q  103 ggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcgag 202  Q
     |||| ||||||||||| ||||||| |||||||||||||||||||||||||||| || ||| ||||||||||| | |||| |    ||||| ||||||||    
T  2321 agggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcaccattttcctgctcgccacagcgaacaacgatctcgccatagcgag 2420  T
Q  203 tagcccatttccttgagctcgccatagcgagca 235  Q
    |||||| ||| ||||||||||||||||| ||||    
T  2421 tagccc-ttttcttgagctcgccatagcaagca 2452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 118 - 237
Target Start/End: Complemental strand, 159746 - 159627
Alignment:
Q  118 gaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcgagtagcccatttccttg 217  Q
    |||||||||| ||||||||||||||||||| |||||||||| ||||||| |||||||||| |||| | |||||||| |||||||||  ||| ||| ||||    
T  159746 gaggatttagtgagaaaaatgtcaaaactctcgagagcagctattttctactcgccacggcgaacaacttactcgccatagcgagttaccccttttcttg 159647  T
Q  218 agctcgccatagcgagcagt 237  Q
    || |||||||||||||||||    
T  159646 agttcgccatagcgagcagt 159627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0696 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0696
Description:

Target: scaffold0696; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 176
Target Start/End: Complemental strand, 3219 - 3045
Alignment:
Q  3 tgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaatt 102  Q
    ||||||||||||||||||| || |  ||| |||| || ||||||||||||||    | | ||| ||||||| ||  | || |||||| ||||||   |||    
T  3219 tgatttttaaaatgttgttataagatgtaagttgaatggttttgagtgcctgggtgtttttagagaggacttggacaatttttagattaaaaagatgatt 3120  T
Q  103 ggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttc-tgctcgccacg 176  Q
     |||||||||||||||| ||||||| |||||||||||||||||||||||||||| || ||||| |||||||||||    
T  3119 agggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcaccatttttcttgctcgccacg 3045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 176
Target Start/End: Complemental strand, 35182 - 35008
Alignment:
Q  3 tgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaatt 102  Q
    ||||||| ||| ||||||| || | |||| ||||||| |||||||||||||| |  | | ||| ||||||||||  | || | |||| ||||||   |||    
T  35182 tgattttcaaattgttgttataagacgtaagttggatagttttgagtgcctggatgtttttagagaggactgggacaattttcagattaaaaagatgatt 35083  T
Q  103 ggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttc-tgctcgccacg 176  Q
     |||||||||||||||| ||||||| ||||||||||||||||||||||| |||| || ||||| |||||||||||    
T  35082 agggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgacagcaccatttttcttgctcgccacg 35008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 174
Target Start/End: Complemental strand, 29930 - 29758
Alignment:
Q  3 tgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaatt 102  Q
    ||||||| ||| ||||||| || | |||| ||||||| |||||||||| |||||  | | ||| |||||||| |  | || | |||| ||||||   |||    
T  29930 tgattttcaaattgttgttataagacgtaagttggatagttttgagtgtctgaatgtttttagagaggactgtgacaattttcagattaaaaagatgatt 29831  T
Q  103 ggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttc-tgctcgcca 174  Q
     |||||||||||||||| ||||||| |||||||||||||||||  ||||||||| || ||||| |||||||||    
T  29830 agggagcttaaaaatgaagatttagtgagaaaaatgtcaaaacgtccgagagcaccatttttcttgctcgcca 29758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 52; Significance: 6e-21; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 33 - 156
Target Start/End: Original strand, 449214 - 449337
Alignment:
Q  33 gttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggggagcttaaaaatgaggatttagggaga 132  Q
    ||||||| |||||||||||||||| || | ||| ||||||||||  | || |||||| ||||||   | | |||||||||||||||| | ||||| ||||    
T  449214 gttggatagttttgagtgcctgaatatttttagagaggactgggacaatttttagattaaaaagatgaatagggagcttaaaaatgaagttttagtgaga 449313  T
Q  133 aaaatgtcaaaactcccgagagca 156  Q
    ||||||||||||||||||||||||    
T  449314 aaaatgtcaaaactcccgagagca 449337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 104 - 154
Target Start/End: Complemental strand, 96408 - 96358
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagag 154  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||    
T  96408 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagag 96358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 156
Target Start/End: Complemental strand, 179506 - 179463
Alignment:
Q  113 aaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||| ||||||| |||||||||| |||||||||||||||||    
T  179506 aaaatgaagatttagtgagaaaaatgacaaaactcccgagagca 179463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1765 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold1765
Description:

Target: scaffold1765; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 3 - 156
Target Start/End: Complemental strand, 203 - 50
Alignment:
Q  3 tgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaatt 102  Q
    ||||||| ||| ||||||| || |  ||| ||||||| |||||||||||||| |  | | ||| ||||||||||  | || |||||| ||||||   | |    
T  203 tgattttcaaattgttgttataagatgtaagttggatagttttgagtgcctggatgtttttagagaggactgggacaatttttagattaaaaagatgaat 104  T
Q  103 ggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
     |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  103 agggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 50  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0485 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0485
Description:

Target: scaffold0485; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 104 - 235
Target Start/End: Complemental strand, 3328 - 3207
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttc-tgctcgccacggtgaacgaattactcgctatagcgag 202  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||||| || ||||| |||||||| ||          ||||||| ||||||||    
T  3328 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcatcatttttcttgctcgccgcg----------tactcgccatagcgag 3239  T
Q  203 tagcccatttccttgagctcgccatagcgagca 235  Q
    |||| ||||| |||||| |||||||||||||||    
T  3238 tagctcattt-cttgagttcgccatagcgagca 3207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 3 - 156
Target Start/End: Complemental strand, 1142 - 989
Alignment:
Q  3 tgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaatt 102  Q
    ||||||||||| ||||||| || |  ||| ||||| | |||||||||||||| |  | | ||| ||||||||||  | || |||||| ||||||   | |    
T  1142 tgatttttaaattgttgttataagatgtaagttggttagttttgagtgcctggatgtttttagagaggactgggacaatttttagattaaaaagatgaat 1043  T
Q  103 ggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
     |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  1042 agggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 3 - 176
Target Start/End: Original strand, 6955 - 7128
Alignment:
Q  3 tgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaatt 102  Q
    ||||||||| ||||||||| || |  ||| ||||||| ||||||||| |||| |  | | ||| ||||||||||  | || |||||| ||||||   |||    
T  6955 tgatttttagaatgttgttataaggtgtaagttggatagttttgagtacctggatgtttttagagaggactgggacaatttttagattaaaaagatgatt 7054  T
Q  103 ggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacg 176  Q
      ||||||||||||||| ||||||| |||||||||||||||||||||||||||| |  |||  |||||||||||    
T  7055 acggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcacctttttcttgctcgccacg 7128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 50; Significance: 9e-20; HSPs: 8)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 104 - 176
Target Start/End: Original strand, 21279 - 21352
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttc-tgctcgccacg 176  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||||| || ||||| |||||||||||    
T  21279 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcaccatttttcttgctcgccacg 21352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 56392 - 56444
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  56392 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 56444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 147505 - 147453
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  147505 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 147453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 154692 - 154640
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  154692 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 154640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 252445 - 252393
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  252445 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 252393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 259051 - 258999
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  259051 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 258999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 104 - 155
Target Start/End: Original strand, 187452 - 187503
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagc 155  Q
    |||| ||||||||||| ||||||| |||||||||||||||||||||||||||    
T  187452 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagc 187503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 104 - 155
Target Start/End: Original strand, 197079 - 197130
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagc 155  Q
    |||| ||||||||||| ||||||| |||||||||||||||||||||||||||    
T  197079 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagc 197130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 12987 - 12935
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  12987 gggagcttaaaaatgaggatttagtgagaaaaatgtcaaaactcccgagagca 12935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 48; Significance: 1e-18; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 259230 - 259171
Alignment:
Q  114 aaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcc 173  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||    
T  259230 aaatgaggatttagtgagaaaaatgtcaaaactcccgagagcagcatttttctgttcgcc 259171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 265645 - 265586
Alignment:
Q  114 aaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcc 173  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||    
T  265645 aaatgaggatttagtgagaaaaatgtcaaaactcccgagagcagcatttttctgttcgcc 265586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 17791 - 17843
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| | ||||| ||||||||||||||||||||| ||||||    
T  17791 gggagcttaaaaatgaagttttagtgagaaaaatgtcaaaactcccaagagca 17843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2016 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold2016
Description:

Target: scaffold2016; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 479 - 541
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttct 166  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||||||| | |||||||    
T  479 gggagcttaaaaatgaggatttagtgggaaaaatgtcaaaactcccgagagcacccattttct 541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 102 - 156
Target Start/End: Complemental strand, 8804 - 8750
Alignment:
Q  102 tggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  8804 tggggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 8750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 102 - 156
Target Start/End: Complemental strand, 18888 - 18834
Alignment:
Q  102 tggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  18888 tggggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 18834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 124544 - 124606
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttct 166  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||||| || ||||||    
T  124544 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcaacatttttct 124606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 104 - 158
Target Start/End: Complemental strand, 35339 - 35285
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagc 158  Q
    |||| ||||||||||| ||||||| ||||||||||| ||||||||||||| ||||    
T  35339 gggaacttaaaaatgaagatttagtgagaaaaatgttaaaactcccgagaacagc 35285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1853 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold1853
Description:

Target: scaffold1853; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 468 - 520
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  468 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0751 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0751
Description:

Target: scaffold0751; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 965 - 913
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  965 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0661 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0661
Description:

Target: scaffold0661; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 3680 - 3732
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  3680 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 3732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 19057 - 19005
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  19057 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 19005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 45; Significance: 9e-17; HSPs: 2)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 3770 - 3718
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  3770 gggagcttaaaaatgaggatttagtgagacaaatgtcaaaactcccgagagca 3718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 156
Target Start/End: Original strand, 13036 - 13083
Alignment:
Q  109 cttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||||||| ||||| |||||||||||||||||| |||||||||    
T  13036 cttaaaaatgaggttttagtgagaaaaatgtcaaaacttccgagagca 13083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 45; Significance: 9e-17; HSPs: 2)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 14162 - 14110
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  14162 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 14110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 352 - 300
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||| ||||||||||  |||||| ||||||||||||||||||||| ||||||    
T  352 gggaggttaaaaatgaaaatttagtgagaaaaatgtcaaaactcccaagagca 300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 45; Significance: 9e-17; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 26439 - 26387
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  26439 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 26387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 2538 - 2590
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||| ||||||||| ||||||||||||||    
T  2538 gggagcttaaaaatgaagatttagtgaggaaaatgtcacaactcccgagagca 2590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 46065 - 46013
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  46065 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 46013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091 (Bit Score: 45; Significance: 9e-17; HSPs: 2)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 22362 - 22414
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  22362 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 22414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 26559 - 26611
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  26559 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 26611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 45; Significance: 9e-17; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 61633 - 61685
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  61633 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 61685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 105 - 156
Target Start/End: Original strand, 60070 - 60121
Alignment:
Q  105 ggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||||||||| ||||| | ||||||||||||||||||||||||||||    
T  60070 ggagcttaaaaatgaagatttggtgagaaaaatgtcaaaactcccgagagca 60121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 3400 - 3452
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  3400 gggagcttaaaaatgaggatttagtgataaaaatgtcaaaactcccgagagca 3452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 45; Significance: 9e-17; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 1093 - 1041
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  1093 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 1041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 11003 - 10952
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||||| ||||||||||||||||||||    
T  11003 gggaacttaaaaatgaagatttagtgagaaaa-tgtcaaaactcccgagagca 10952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 105 - 156
Target Start/End: Original strand, 968 - 1019
Alignment:
Q  105 ggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  968 ggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 1019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 105 - 156
Target Start/End: Complemental strand, 26147 - 26096
Alignment:
Q  105 ggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  26147 ggagcttaaaaatgatgatttagtgagaaaaatgtcaaaactcccgagagca 26096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 141882 - 141823
Alignment:
Q  114 aaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcc 173  Q
    |||||||||||||| ||||||||||||||||||||||||||||||  ||||||| |||||    
T  141882 aaatgaggatttagtgagaaaaatgtcaaaactcccgagagcagcctttttctgttcgcc 141823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 104 - 158
Target Start/End: Complemental strand, 2691 - 2637
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagc 158  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  2691 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcagc 2637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 106 - 156
Target Start/End: Original strand, 5008 - 5058
Alignment:
Q  106 gagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  5008 gagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 5058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 106 - 156
Target Start/End: Original strand, 55562 - 55612
Alignment:
Q  106 gagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  55562 gagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 55612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 106 - 156
Target Start/End: Original strand, 72518 - 72568
Alignment:
Q  106 gagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  72518 gagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 72568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 3)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 34 - 156
Target Start/End: Original strand, 80713 - 80835
Alignment:
Q  34 ttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggggagcttaaaaatgaggatttagggagaa 133  Q
    |||| ||||||||||||||||||  | | ||| ||||||||||  | || | |||| ||||||   | | |||||||||||||||| | ||||| |||||    
T  80713 ttggttcgttttgagtgcctgaatgtttttagagaggactgggacaattttcagattaaaaagatgaatagggagcttaaaaatgaagctttagtgagaa 80812  T
Q  134 aaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||||||||||    
T  80813 aaatgtcaaaactcccgagagca 80835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 98090 - 98142
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| | ||||| ||||||||||||||||||||||||||||    
T  98090 gggagcttaaaaatgaagttttagtgagaaaaatgtcaaaactcccgagagca 98142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 161128 - 161180
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||||| || || |||||||||||||||| |||||||||||    
T  161128 gggagcttagaattgaggtttgagtgagaaaaatgtcaaaaatcccgagagca 161180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 104 - 173
Target Start/End: Complemental strand, 71649 - 71580
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcc 173  Q
    ||||||||| || ||| ||||||| ||||||||||||||||||||||||||||||  ||||||| |||||    
T  71649 gggagcttagaattgaagatttagtgagaaaaatgtcaaaactcccgagagcagcctttttctgttcgcc 71580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 105 - 156
Target Start/End: Complemental strand, 77279 - 77228
Alignment:
Q  105 ggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||  |||||| ||||||| ||||||||||||||||||||||||||||    
T  77279 ggagcttcgaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 77228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1336 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold1336
Description:

Target: scaffold1336; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 371 - 423
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||| ||| ||||||| ||||||||||||||||||||||||||||    
T  371 gggagcttaaaactgaagatttagtgagaaaaatgtcaaaactcccgagagca 423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0790 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0790
Description:

Target: scaffold0790; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 5030 - 4978
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| | ||||||||||||||||||||||||||| ||||||    
T  5030 gggagcttaaaaatgatgttttagggagaaaaatgtcaaaactcccaagagca 4978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 2965 - 3017
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  2965 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 3017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0585 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0585
Description:

Target: scaffold0585; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 166
Target Start/End: Original strand, 8000 - 8164
Alignment:
Q  3 tgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaatt 102  Q
    ||||||| ||| ||||||| || | |||| ||||||| |||||||||| |||||  | | ||| ||||||||||  | || | |||| ||||||   |||    
T  8000 tgattttcaaattgttgttataagacgtaagttggatagttttgagtgtctgaatgtttttagagaggactgggacaattttcagattaaaaagatgatt 8099  T
Q  103 ggggagcttaaaaatgaggatttagggagaaaaatg-tcaaaactcccgagagcagcaattttct 166  Q
     |||||||||||||||| ||||||| || ||||| | |||||||||||||||||| || ||||||    
T  8100 agggagcttaaaaatgaagatttagtgaaaaaaaaggtcaaaactcccgagagcaccatttttct 8164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 8846 - 8898
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| | ||||| ||||||||||||||||||||||||||||    
T  8846 gggagcttaaaaatgaagttttagtgagaaaaatgtcaaaactcccgagagca 8898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0405 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0405
Description:

Target: scaffold0405; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 2930 - 2982
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  2930 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 2982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0405; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 11632 - 11684
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||| | |||||||||||||||||||| |||||||    
T  11632 gggaacttaaaaatgaagatttcgtgagaaaaatgtcaaaactcctgagagca 11684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 2476 - 2424
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| | ||||| ||||||||||||||||||||||||||||    
T  2476 gggagcttaaaaatgaagttttagtgagaaaaatgtcaaaactcccgagagca 2424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 23555 - 23503
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| | ||||| ||||||||| ||||||||||||||||||    
T  23555 gggagcttaaaaatgaagttttagtgagaaaaatatcaaaactcccgagagca 23503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0253 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0253
Description:

Target: scaffold0253; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 5822 - 5770
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| |||||||||||||||||| |||||||||    
T  5822 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaacttccgagagca 5770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 156
Target Start/End: Complemental strand, 9328 - 9176
Alignment:
Q  4 gatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattg 103  Q
    |||||||||| ||||||| || |  ||| ||||||| |||||||||||||| |  | | | | ||||||||||  | || |||||| ||||||   | |     
T  9328 gatttttaaattgttgttataaggtgtaagttggatagttttgagtgcctggatgtttttggagaggactgggacaatttttagattaaaaagatgaata 9229  T
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||| ||||    
T  9228 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgatagca 9176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 27800 - 27748
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||| ||||||||||||||||||    
T  27800 gggagcttaaaaatgaagatttagtgagaaaaatatcaaaactcccgagagca 27748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 26857 - 26805
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||| ||||||||||||||||||    
T  26857 gggagcttaaaaatgaagatttagtgagaaaaatatcaaaactcccgagagca 26805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 3)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 156
Target Start/End: Complemental strand, 21503 - 21351
Alignment:
Q  4 gatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattg 103  Q
    |||||||||| ||||||| || |  ||| ||||||| ||||||||||||||||    | ||| |||||||||   | || |||||| ||||||   | |     
T  21503 gatttttaaattgttgttataaggtgtaagttggatagttttgagtgcctgaatgattttagagaggactggaacaatttttagattaaaaagatgaata 21404  T
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
     ||||||||||||||| ||||||| |||||||||||||||| |||||||||||    
T  21403 tggagcttaaaaatgaagatttagtgagaaaaatgtcaaaattcccgagagca 21351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 32070 - 32018
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||| ||||||| ||||||| ||||||||||||||||||||||||||||    
T  32070 gggagcttgaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 32018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 156
Target Start/End: Complemental strand, 7145 - 7099
Alignment:
Q  110 ttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||| ||||||| |||| |||||||||||||||||||||||    
T  7145 ttaaaaatgaagatttagtgagataaatgtcaaaactcccgagagca 7099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 19755 - 19807
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  19755 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 19807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 1903 - 1851
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  1903 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 1851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 7479 - 7427
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  7479 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 7427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 9790 - 9738
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  9790 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcctgagagca 9738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 45461 - 45409
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| |||||||||||||||||| |||||||||    
T  45461 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaacttccgagagca 45409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 9803 - 9751
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  9803 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcctgagagca 9751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 47477 - 47529
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  47477 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 47529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 42490 - 42438
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| ||||||| ||||||||||||||||||||||||||||    
T  42490 gggagcttagaattgatgatttagtgagaaaaatgtcaaaactcccgagagca 42438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 3)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 30369 - 30317
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||| ||||||    
T  30369 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccaagagca 30317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 38963 - 38911
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| || |||| ||||||||||||||||||||| ||||||    
T  38963 gggaacttaaaaatgaagaattagtgagaaaaatgtcaaaactcccaagagca 38911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 45034 - 44982
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| || |||| ||||||||||| ||||||||||||||||    
T  45034 gggaacttaaaaatgaagaattagtgagaaaaatgttaaaactcccgagagca 44982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 3434 - 3382
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  3434 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 3382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 92215 - 92267
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||| | ||||||| ||||||||||||||||||||||||||||    
T  92215 gggagcttaaaaataaagatttagtgagaaaaatgtcaaaactcccgagagca 92267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 237
Target Start/End: Complemental strand, 88284 - 88215
Alignment:
Q  168 ctcgccacggtgaacgaattactcgctatagcgagtagcccatttccttgagctcgccatagcgagcagt 237  Q
    |||||||||| |||||| |||||||| |||||||||  ||| ||| |||||| |||||||||||||||||    
T  88284 ctcgccacggcgaacgacttactcgccatagcgagttaccccttttcttgagttcgccatagcgagcagt 88215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 2581 - 2633
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||| ||||||| ||||||| ||||||||||||||||||||||||||||    
T  2581 gggagctttaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 2633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 207348 - 207400
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||| ||||||||||||    
T  207348 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaacctcccgagagca 207400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 33 - 156
Target Start/End: Complemental strand, 2872 - 2749
Alignment:
Q  33 gttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggggagcttaaaaatgaggatttagggaga 132  Q
    ||||||| |||||||||||||||| || | ||| ||||||||||  | || |||||| ||||||   | | ||||||||||||||   | ||||| | ||    
T  2872 gttggatagttttgagtgcctgaatatttttagagaggactgggacaatttttagattaaaaagatgaatagggagcttaaaaatatagttttagtgtga 2773  T
Q  133 aaaatgtcaaaactcccgagagca 156  Q
    ||||||||||||||||||||||||    
T  2772 aaaatgtcaaaactcccgagagca 2749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 109 - 156
Target Start/End: Original strand, 152973 - 153020
Alignment:
Q  109 cttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  152973 cttaaaaatgaggttttagtgagaaaaatgtcaaaactcccgagagca 153020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 20125 - 20177
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| ||||||| ||||||||||||||||||||||||||||    
T  20125 gggagcttagaattgatgatttagtgagaaaaatgtcaaaactcccgagagca 20177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1290 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold1290
Description:

Target: scaffold1290; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 104 - 154
Target Start/End: Original strand, 885 - 935
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagag 154  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||    
T  885 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagag 935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0923 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0923
Description:

Target: scaffold0923; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 106 - 156
Target Start/End: Complemental strand, 384 - 334
Alignment:
Q  106 gagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||| ||| ||||||| ||||||||||||||||||||||||||||    
T  384 gagcttaaaagtgaagatttagtgagaaaaatgtcaaaactcccgagagca 334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0377 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0377
Description:

Target: scaffold0377; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 157
Target Start/End: Complemental strand, 3752 - 3699
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcag 157  Q
    |||| ||| ||||||||||||||| |||||||||| ||||||||||||||||||    
T  3752 gggaacttgaaaatgaggatttagtgagaaaaatgacaaaactcccgagagcag 3699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0377; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 157
Target Start/End: Complemental strand, 7791 - 7738
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcag 157  Q
    |||| ||| ||||||||||||||| |||||||||| ||||||||||||||||||    
T  7791 gggaacttgaaaatgaggatttagtgagaaaaatgacaaaactcccgagagcag 7738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 173
Target Start/End: Original strand, 16496 - 16565
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcc 173  Q
    |||| ||||||||||| ||||||| |||| |||||||||||||||| ||||||||  ||||||| |||||    
T  16496 gggaacttaaaaatgaagatttagtgagagaaatgtcaaaactcccaagagcagcctttttctgttcgcc 16565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 173
Target Start/End: Complemental strand, 44752 - 44683
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcc 173  Q
    |||| ||||||||||| ||||||| ||||||||||||||| |||||||||| |||  ||||||| |||||    
T  44752 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaagctcccgagagtagcctttttctgttcgcc 44683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 153
Target Start/End: Complemental strand, 143223 - 143174
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgaga 153  Q
    |||||||||||| ||| ||||||| |||||||||||||||||||||||||    
T  143223 gggagcttaaaattgaagatttagtgagaaaaatgtcaaaactcccgaga 143174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 62831 - 62883
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| ||||||| ||||||||||||||||||||||||||||    
T  62831 gggagcttagaattgatgatttagtgagaaaaatgtcaaaactcccgagagca 62883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 156
Target Start/End: Original strand, 171435 - 171480
Alignment:
Q  111 taaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||||    
T  171435 taaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 171480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 148
Target Start/End: Complemental strand, 1938 - 1894
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcc 148  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||    
T  1938 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcc 1894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 6710 - 6658
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||| ||| | ||||| ||||||||||||||||||||||||||||    
T  6710 gggagcttaaaactgaagttttagtgagaaaaatgtcaaaactcccgagagca 6658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 9008 - 8956
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| | ||||| |||||||||||||||||| |||||||||    
T  9008 gggagcttaaaaatgaagttttagtgagaaaaatgtcaaaacttccgagagca 8956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 152
Target Start/End: Original strand, 8893 - 8941
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgag 152  Q
    |||||||||||||||| ||||||| ||| ||||||||||||||||||||    
T  8893 gggagcttaaaaatgaagatttagtgaggaaaatgtcaaaactcccgag 8941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 11950 - 12002
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||| ||||| ||| ||||||| ||||||||||||||||||||||||||||    
T  11950 gggagcctaaaattgaagatttagtgagaaaaatgtcaaaactcccgagagca 12002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 14106 - 14158
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| ||||||| ||||||||||||||||||||||||||||    
T  14106 gggagcttagaattgatgatttagtgagaaaaatgtcaaaactcccgagagca 14158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 25994 - 25942
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| |||||| ||||||| ||||||||||||||||||||| ||||||    
T  25994 gggagcttagaaatgaagatttagtgagaaaaatgtcaaaactcccaagagca 25942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 4678 - 4730
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||| ||||||||    
T  4678 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactctcgagagca 4730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 46376 - 46428
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||| ||||||    
T  46376 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccaagagca 46428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 50649 - 50701
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||| ||||||    
T  50649 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccaagagca 50701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 28402 - 28350
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||||| ||||  ||||||||||||||||||||||||||||    
T  28402 gggaacttaaaaatgaggttttactgagaaaaatgtcaaaactcccgagagca 28350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 17053 - 17105
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| |||||||||||||||||||  |||||||    
T  17053 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcttgagagca 17105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 20732 - 20680
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| ||||||| ||||||||||||||||||||||||||||    
T  20732 gggagcttagaattgaagatttagtgagaaaaatgtcaaaactcccgagagca 20680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 56423 - 56371
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| |||||||| |||||||||||||||||||    
T  56423 gggaacttaaaaatgaagatttagtgagaaaaaagtcaaaactcccgagagca 56371  T

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Target: scaffold0071 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 50579 - 50631
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| ||||||| ||||||||||||||||||||||||||||    
T  50579 gggagcttataattgatgatttagtgagaaaaatgtcaaaactcccgagagca 50631  T

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Target: scaffold0022 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 38284 - 38336
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||| ||||||||||||||||||||||    
T  38284 gggaacttaaaaatgaagatttagtgagaagaatgtcaaaactcccgagagca 38336  T

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Target: scaffold0022; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 136344 - 136396
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||| ||||||||||||||||||||||    
T  136344 gggaacttaaaaatgaagatttagtgagaagaatgtcaaaactcccgagagca 136396  T

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Target: scaffold0010 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 156
Target Start/End: Original strand, 43738 - 43785
Alignment:
Q  109 cttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||||| | ||||| ||||||||||||||||||||||||||||    
T  43738 cttaaaaatgaagttttagtgagaaaaatgtcaaaactcccgagagca 43785  T

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Target: scaffold0010; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 156
Target Start/End: Original strand, 48804 - 48851
Alignment:
Q  109 cttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||||| | ||||| ||||||||||||||||||||||||||||    
T  48804 cttaaaaatgaagttttagtgagaaaaatgtcaaaactcccgagagca 48851  T

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Target: scaffold0430 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0430
Description:

Target: scaffold0430; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 115 - 173
Target Start/End: Original strand, 14192 - 14250
Alignment:
Q  115 aatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcc 173  Q
    ||||||||||||| ||||||||| |||||||| |||||||||||  ||||||| |||||    
T  14192 aatgaggatttagtgagaaaaatatcaaaacttccgagagcagcctttttctgttcgcc 14250  T

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Target: scaffold0076 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 104 - 173
Target Start/End: Original strand, 51316 - 51386
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtc-aaaactcccgagagcagcaattttctgctcgcc 173  Q
    ||||||||| || ||| ||||||| |||||||||||| ||||||||||||||||||  ||||||| |||||    
T  51316 gggagcttagaattgaagatttagtgagaaaaatgtcaaaaactcccgagagcagcctttttctgttcgcc 51386  T

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Target: scaffold0669 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0669
Description:

Target: scaffold0669; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 155
Target Start/End: Original strand, 1273 - 1386
Alignment:
Q  42 ttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggggagcttaaaaatgaggatttagggagaaaaatgtca 141  Q
    |||||||||||||||  | | ||| ||||||||||  | || |||||| ||||||   | | |||||||||||||| | ||||||| ||||||||| |||    
T  1273 ttttgagtgcctgaatgtttttagagaggactgggacaatttttagattaaaaagatgaatagggagcttaaaaattaagatttagtgagaaaaatttca 1372  T
Q  142 aaactcccgagagc 155  Q
    ||||| ||||||||    
T  1373 aaacttccgagagc 1386  T

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Target: scaffold0211 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 156
Target Start/End: Complemental strand, 9891 - 9842
Alignment:
Q  107 agcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||||||| ||||||| |||||| |||| ||||||||||||||||    
T  9891 agcttaaaaatgaagatttagtgagaaagatgtaaaaactcccgagagca 9842  T

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Target: scaffold0104 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 41274 - 41327
Alignment:
Q  104 gggagcttaaaaatgaggatttagggag-aaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||| ||||| |||||||||||||||||||    
T  41274 gggagcttaaaaatgaagatttagtgagaaaaaaagtcaaaactcccgagagca 41327  T

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Target: scaffold0065 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 173
Target Start/End: Original strand, 27383 - 27452
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcc 173  Q
    ||||||||| || ||| | ||||| ||||||||||||||||||||| ||||||||  ||||||| |||||    
T  27383 gggagcttagaattgaagttttagtgagaaaaatgtcaaaactcccaagagcagcctttttctgttcgcc 27452  T

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Target: scaffold1584 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1584
Description:

Target: scaffold1584; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 882 - 830
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| | ||||| ||||||||||||||||||||||||||||    
T  882 gggagcttagaattgaagttttagtgagaaaaatgtcaaaactcccgagagca 830  T

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Target: scaffold0574 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 5518 - 5570
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||| ||| || ||| ||||||| ||||||||||||||||||||||||||||    
T  5518 gggagtttagaattgaagatttagtgagaaaaatgtcaaaactcccgagagca 5570  T

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Target: scaffold0348 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 15122 - 15174
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| |||| || ||| ||||||| ||||||||||||||||||||||||||||    
T  15122 gggaacttagaattgatgatttagtgagaaaaatgtcaaaactcccgagagca 15174  T

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Target: scaffold0220 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 10920 - 10868
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| ||||||| |||||||||| |||||||||||||||||    
T  10920 gggagcttagaattgatgatttagtgagaaaaatgccaaaactcccgagagca 10868  T

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Target: scaffold0049 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 42551 - 42603
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||||||||||   |||||  |||||||||||||||||||||||||||    
T  42551 gggagcttaaaaatgaaattttagtaagaaaaatgtcaaaactcccgagagca 42603  T

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Target: scaffold0049; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 53246 - 53298
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||||||||||   |||||  |||||||||||||||||||||||||||    
T  53246 gggagcttaaaaatgaaattttagtaagaaaaatgtcaaaactcccgagagca 53298  T

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Target: scaffold0002 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 370937 - 370885
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||  ||||||||    
T  370937 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactttcgagagca 370885  T

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Target: scaffold0063 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 156
Target Start/End: Complemental strand, 24777 - 24726
Alignment:
Q  105 ggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||| || ||||||| ||| |||||||||||||||| |||||||||||    
T  24777 ggagcttagaattgaggatctagtgagaaaaatgtcaaaattcccgagagca 24726  T

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Target: scaffold0063; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 156
Target Start/End: Complemental strand, 14575 - 14525
Alignment:
Q  106 gagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||| || ||||||| ||| |||||||||||||||| |||||||||||    
T  14575 gagcttagaattgaggatctagtgagaaaaatgtcaaaattcccgagagca 14525  T

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Target: scaffold0402 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0402
Description:

Target: scaffold0402; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 142
Target Start/End: Complemental strand, 15494 - 15456
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaa 142  Q
    |||||||||||||||| ||||||| ||||||||||||||    
T  15494 gggagcttaaaaatgaagatttagtgagaaaaatgtcaa 15456  T

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Target: scaffold0037 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 154
Target Start/End: Original strand, 101300 - 101350
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagag 154  Q
    ||||||||| || ||||| || || ||||||||||||||||||||||||||    
T  101300 gggagcttagaattgaggtttgagtgagaaaaatgtcaaaactcccgagag 101350  T

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Target: scaffold0947 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0947
Description:

Target: scaffold0947; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 145
Target Start/End: Original strand, 3787 - 3828
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaac 145  Q
    |||| ||||||||||| ||||||| |||||||||||||||||    
T  3787 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaac 3828  T

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Target: scaffold0323 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0323
Description:

Target: scaffold0323; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 173
Target Start/End: Complemental strand, 7809 - 7740
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcc 173  Q
    ||||||||| || ||  ||||||| ||| ||||| ||||||||||||||||||||  ||||||| |||||    
T  7809 gggagcttagaattgtagatttagtgaggaaaatatcaaaactcccgagagcagcctttttctgttcgcc 7740  T

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Target: scaffold0297 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 1386 - 1438
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| | ||||| ||||||||||  ||||||||||| ||||    
T  1386 gggagcttaaaaatgaagttttagtgagaaaaatgataaaactcccgaaagca 1438  T

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Target: scaffold0249 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 6397 - 6449
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| | ||||  |||||||||||  |||||||||||||||    
T  6397 gggagcttaaaaatgaagttttaatgagaaaaatgtttaaactcccgagagca 6449  T

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Target: scaffold0158 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 14956 - 14904
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| | || || ||||||||||||||||||||||||||||    
T  14956 gggagcttagaattgaagtttgagtgagaaaaatgtcaaaactcccgagagca 14904  T

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Target: scaffold0060 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 41755 - 41703
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| | || || ||||||||||||||||||||||||||||    
T  41755 gggagcttagaattgaagtttgagtgagaaaaatgtcaaaactcccgagagca 41703  T

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