View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8539_low_9 (Length: 226)
Name: NF8539_low_9
Description: NF8539
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8539_low_9 |
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| [»] chr7 (14 HSPs) |
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| [»] chr8 (12 HSPs) |
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| [»] scaffold0034 (1 HSPs) |
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| [»] chr2 (11 HSPs) |
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| [»] scaffold0364 (1 HSPs) |
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| [»] scaffold0371 (1 HSPs) |
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| [»] scaffold0149 (1 HSPs) |
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| [»] scaffold0090 (1 HSPs) |
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| [»] scaffold0388 (1 HSPs) |
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| [»] scaffold0117 (1 HSPs) |
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| [»] scaffold0485 (1 HSPs) |
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| [»] scaffold0016 (1 HSPs) |
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| [»] scaffold0556 (1 HSPs) |
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| [»] scaffold0014 (1 HSPs) |
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| [»] scaffold0126 (1 HSPs) |
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| [»] scaffold0500 (1 HSPs) |
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| [»] scaffold0130 (1 HSPs) |
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| [»] scaffold0381 (1 HSPs) |
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| [»] scaffold0069 (2 HSPs) |
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| [»] scaffold0011 (1 HSPs) |
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| [»] scaffold0420 (1 HSPs) |
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| [»] scaffold0860 (1 HSPs) |
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| [»] scaffold0635 (1 HSPs) |
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| [»] scaffold0322 (1 HSPs) |
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| [»] scaffold0106 (1 HSPs) |
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| [»] scaffold0586 (1 HSPs) |
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| [»] scaffold0335 (1 HSPs) |
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| [»] scaffold0089 (1 HSPs) |
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| [»] scaffold0609 (1 HSPs) |
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| [»] scaffold0585 (1 HSPs) |
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| [»] scaffold0575 (1 HSPs) |
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| [»] scaffold0395 (1 HSPs) |
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| [»] scaffold0057 (1 HSPs) |
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| [»] scaffold0672 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 194; Significance: 1e-105; HSPs: 14)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 13849802 - 13849577
Alignment:
| Q |
1 |
acaactactactcaacaatgcatatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaacttttgacaatggaatccaacaacttgta |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13849802 |
acaactactactcaacaatgcatatttaaatatgccttacacctcaacatggtcaactcgtgacacaacaacttttgacaatggaatccaacaacttgta |
13849703 |
T |
|
| Q |
101 |
tattctatttaaatgcaattatgcataaatcagcaatcaacaatcaatcatattcaaatcaacagctcgggtaaaataacataattaatcataattattt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |
|
|
| T |
13849702 |
tattctatttaaatgcaattatgcataaatcagcattcaacaatcaatcatattcaaatcaacagctctagtaaaataacataatttatcataattattt |
13849603 |
T |
|
| Q |
201 |
attctacccaaagaatccaacccaac |
226 |
Q |
| |
|
||||||||||||||||||||||||| |
|
|
| T |
13849602 |
gttctacccaaagaatccaacccaac |
13849577 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 16573401 - 16573622
Alignment:
| Q |
1 |
acaactactactcaacaatgcatatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaacttttgacaatggaatccaacaacttgta |
100 |
Q |
| |
|
||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
16573401 |
acaactactactcaacagtgcatatttaaatatgtcttacacctcaacatggtcaactcgtgacgcaacaacttttgacaatggaatccaacaacttgta |
16573500 |
T |
|
| Q |
101 |
tattctatttaaatgcaattatgcataaatcagcaatcaacaatcaatcatattcaaatcaacagctcgggtaaaataacataattaatcataattattt |
200 |
Q |
| |
|
||||||||||| ||||||||| ||||| |||| || |||||||||||| |||||||| |||||| ||| |||||||||||||||| ||||||||||||| |
|
|
| T |
16573501 |
tattctatttatatgcaattacgcatagatcaacattcaacaatcaattatattcaagtcaacaactctagtaaaataacataatttatcataattattt |
16573600 |
T |
|
| Q |
201 |
attctacccaaagaatccaacc |
222 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
16573601 |
gttctacccaaagaatccaacc |
16573622 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 16592261 - 16592040
Alignment:
| Q |
1 |
acaactactactcaacaatgcatatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaacttttgacaatggaatccaacaacttgta |
100 |
Q |
| |
|
||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
16592261 |
acaactactactcaacagtgcatatttaaatatgtcttacacctcaacatggtcaactcgtgacgcaacaacttttgacaatggaatccaacaacttgta |
16592162 |
T |
|
| Q |
101 |
tattctatttaaatgcaattatgcataaatcagcaatcaacaatcaatcatattcaaatcaacagctcgggtaaaataacataattaatcataattattt |
200 |
Q |
| |
|
||||||||||| ||||||||| ||||| |||| || |||||||||||| |||||||| |||||| ||| |||||||||||||||| ||||||||||||| |
|
|
| T |
16592161 |
tattctatttatatgcaattacgcatagatcaacattcaacaatcaattatattcaagtcaacaactctagtaaaataacataatttatcataattattt |
16592062 |
T |
|
| Q |
201 |
attctacccaaagaatccaacc |
222 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
16592061 |
gttctacccaaagaatccaacc |
16592040 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 13 - 212
Target Start/End: Complemental strand, 7507405 - 7507205
Alignment:
| Q |
13 |
caacaatgcatatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaacttttgacaatggaatccaacaacttgtatattctatttaa |
112 |
Q |
| |
|
||||| ||||||||||||||| |||||||||||||||| |||||| | ||||||| ||||||||||||||| || ||| | ||||| ||| ||||||| |
|
|
| T |
7507405 |
caacagtgcatatttaaatatgacttacacctcaacatgatcaacttgtgacacaaaaacttttgacaatggcattcaatactttgtacattttatttaa |
7507306 |
T |
|
| Q |
113 |
atgcaattatgcataaatcagcaatcaacaatcaatcatattcaaatcaacagctcgggt-aaaataacataattaatcataattatttattctacccaa |
211 |
Q |
| |
|
||||||||| ||| ||||| |||||||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7507305 |
atgcaattacacatgaatcaacaatcaacaatccatcatattcaaatcaacagctctggtaaaaataacataattaatcataattatttattctacccaa |
7507206 |
T |
|
| Q |
212 |
a |
212 |
Q |
| |
|
| |
|
|
| T |
7507205 |
a |
7507205 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 5 - 211
Target Start/End: Original strand, 7529289 - 7529495
Alignment:
| Q |
5 |
ctactactcaacaatgcatatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaacttttgacaatggaatccaacaacttgtatatt |
104 |
Q |
| |
|
||||||| ||||| ||||||| ||||||| |||||| ||||||||||||||| || |||||||||| || ||||||||||| |||||||||||||| | |
|
|
| T |
7529289 |
ctactacacaacagtgcatatataaatatgatttacacatcaacatggtcaactagcaacacaacaaccttcgacaatggaattcaacaacttgtataat |
7529388 |
T |
|
| Q |
105 |
ctatttaaatgcaattatgcataaatcagcaatcaacaatcaatcatattcaaatcaacagctcgggtaaaataacataattaatcataattatttattc |
204 |
Q |
| |
|
|||||| |||||||||| |||||||| ||||||||||||| | |||||||||||| || ||| | |||||||| ||||||||||| ||||||||| | |
|
|
| T |
7529389 |
ttatttacatgcaattatacataaatccacaatcaacaatcatttatattcaaatcagcaactctgataaaataatataattaatcagaattatttaata |
7529488 |
T |
|
| Q |
205 |
tacccaa |
211 |
Q |
| |
|
||||||| |
|
|
| T |
7529489 |
tacccaa |
7529495 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 6 - 191
Target Start/End: Original strand, 15725636 - 15725824
Alignment:
| Q |
6 |
tactactcaacaatgcatatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaacttttg--acaatggaatccaacaacttgtatat |
103 |
Q |
| |
|
|||||| ||||| ||||||||||||||| ||||||| ||||||| |||| || | |||||||||||||||| |||||| || ||||||||| |||| |
|
|
| T |
15725636 |
tactacacaacactgcatatttaaatatgacttacacttcaacattgtcatcttgtgacacaacaacttttgttacaatgacattcaacaacttttataa |
15725735 |
T |
|
| Q |
104 |
tctatttaaatgcaattatgcataaatcagcaatcaacaatcaatcatattcaaatcaacagctcgggta-aaataacataattaatca |
191 |
Q |
| |
|
| ||||||||| ||| || |||| | || ||||||| |||||| |||| ||||||||||| ||| |||| ||| |||||||||||||| |
|
|
| T |
15725736 |
tttatttaaatataatcatacatagaacaacaatcaataatcaaccataatcaaatcaacaactctggtagaaacaacataattaatca |
15725824 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 5 - 77
Target Start/End: Complemental strand, 15731720 - 15731648
Alignment:
| Q |
5 |
ctactactcaacaatgcatatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaacttttg |
77 |
Q |
| |
|
||||||||||||| ||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||| |
|
|
| T |
15731720 |
ctactactcaacagtgcatatttaaatatgacttacacctcaacatggtcaacttgtgacacaacaacttttg |
15731648 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 15690106 - 15690303
Alignment:
| Q |
1 |
acaactactactcaacaatgcatattta--aatatatcttacacctcaacatggtcaactcgcgacacaacaacttttgacaatggaatccaacaacttg |
98 |
Q |
| |
|
|||||| |||||||||| ||||||| || ||||| |||||||| ||||| |||| || || ||| |||| ||||| |||| ||| |||||||||| |
|
|
| T |
15690106 |
acaactgctactcaacagtgcatatatatgaatatgacttacaccacaacagagtcatctaatgatacatcaacctttga-aatgaaattcaacaacttg |
15690204 |
T |
|
| Q |
99 |
tatattctatttaaatgcaattatgcataaatcagcaatcaacaatcaatcatattcaaatcaacagctcgggtaaaataacataattaatcataattat |
198 |
Q |
| |
|
|||| | ||||||||| || ||| ||||| |||||||||||||| |||||| | || |||||||||| |||||||||||| |||||||||||| ||| |
|
|
| T |
15690205 |
tataatttatttaaatataaatatacataa--cagcaatcaacaattcatcatacttaattcaacagctccggtaaaataacacaattaatcataactat |
15690302 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 15697699 - 15697896
Alignment:
| Q |
1 |
acaactactactcaacaatgcatattta--aatatatcttacacctcaacatggtcaactcgcgacacaacaacttttgacaatggaatccaacaacttg |
98 |
Q |
| |
|
|||||| |||||||||| ||||||| || ||||| |||||||| ||||| |||| || || ||| |||| ||||| |||| ||| |||||||||| |
|
|
| T |
15697699 |
acaactgctactcaacagtgcatatatatgaatatgacttacaccacaacagagtcatctaatgatacatcaacctttga-aatgaaattcaacaacttg |
15697797 |
T |
|
| Q |
99 |
tatattctatttaaatgcaattatgcataaatcagcaatcaacaatcaatcatattcaaatcaacagctcgggtaaaataacataattaatcataattat |
198 |
Q |
| |
|
|||| | ||||||||| || ||| ||||| |||||||||||||| |||||| | || |||||||||| |||||||||||| |||||||||||| ||| |
|
|
| T |
15697798 |
tataatttatttaaatataaatatacataa--cagcaatcaacaattcatcatacttaattcaacagctccggtaaaataacacaattaatcataactat |
15697895 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 19 - 161
Target Start/End: Complemental strand, 39995714 - 39995572
Alignment:
| Q |
19 |
tgcatatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaacttttgacaatggaatccaacaacttgtatattctatttaaatgcaa |
118 |
Q |
| |
|
||||||| ||||||| ||||||| ||||||||||| || ||||||||||| || |||||| ||| |||||||||||||| | |||||| || ||| |
|
|
| T |
39995714 |
tgcatatataaatatgacttacacatcaacatggtcgaccaatgacacaacaaccttcgacaatataattcaacaacttgtataatttatttacatacaa |
39995615 |
T |
|
| Q |
119 |
ttatgcataaatcagcaatcaacaatcaatcatattcaaatca |
161 |
Q |
| |
|
||| |||||||| ||||||| ||||| |||||||||||||| |
|
|
| T |
39995614 |
atatacataaatccacaatcaataatcattcatattcaaatca |
39995572 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 42041574 - 42041711
Alignment:
| Q |
1 |
acaactactactcaacaatgcatatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaacttttgacaatggaatccaacaacttgta |
100 |
Q |
| |
|
|||||| |||| ||||||||||||| | ||||| ||||| | ||||||||||||||| ||||||||||| || ||||||| | | |||||||||||| |
|
|
| T |
42041574 |
acaactgctacacaacaatgcatatatgaatatgacttactcatcaacatggtcaactat-gacacaacaaccttcgacaatgaatttcaacaacttgta |
42041672 |
T |
|
| Q |
101 |
tattctatttaaatgcaattatgcataaatcagcaatca |
139 |
Q |
| |
|
|| | | |||||||| |||||| ||||||||| |||||| |
|
|
| T |
42041673 |
taatttgtttaaatgtaattatacataaatcaacaatca |
42041711 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 88 - 166
Target Start/End: Original strand, 35366213 - 35366289
Alignment:
| Q |
88 |
ccaacaacttgtatattctatttaaatgcaattatgcataaatcagcaatcaacaatcaatcatattcaaatcaacagc |
166 |
Q |
| |
|
|||||| ||||||||||||| || |||||||||| ||||||| ||||||||| ||| ||||||||||| |||||||||| |
|
|
| T |
35366213 |
ccaacaccttgtatattctaattgaatgcaattaagcataaaccagcaatcatcaa-caatcatattc-aatcaacagc |
35366289 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 151
Target Start/End: Complemental strand, 41782938 - 41782876
Alignment:
| Q |
89 |
caacaacttgtatattctatttaaatgcaattatgcataaatcagcaatcaacaatcaatcat |
151 |
Q |
| |
|
|||||||||||||| | | |||||||| |||||| ||||||||| |||||||| |||| |||| |
|
|
| T |
41782938 |
caacaacttgtataatttgtttaaatgaaattatacataaatcaacaatcaaccatcattcat |
41782876 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 151
Target Start/End: Complemental strand, 15731644 - 15731595
Alignment:
| Q |
102 |
attctatttaaatgcaattatgcataaatcagcaatcaacaatcaatcat |
151 |
Q |
| |
|
||||||||||||| |||| || ||||| ||| |||||||||||||||||| |
|
|
| T |
15731644 |
attctatttaaatacaatcatacataattcaacaatcaacaatcaatcat |
15731595 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 178; Significance: 4e-96; HSPs: 12)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 43112185 - 43112410
Alignment:
| Q |
1 |
acaactactactcaacaatgcatatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaacttttgacaatggaatccaacaacttgta |
100 |
Q |
| |
|
|||||||||| |||||| ||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43112185 |
acaactactattcaacagtgcatatttaaatatgtcttacacctcaacatggttaactcgtgacacaacaacttttgacaatggaatccaacaacttgta |
43112284 |
T |
|
| Q |
101 |
tattctatttaaatgcaattatgcataaatcagcaatcaacaatcaatcatattcaaatcaacagctcgggtaaaataacataattaatcataattattt |
200 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |
|
|
| T |
43112285 |
tattctatttaaatgaaattatgcataaatcagcattcaacaatcaatcatattcaaatcaacagctctagtaaaataacataatttatcataattattt |
43112384 |
T |
|
| Q |
201 |
attctacccaaagaatccaacccaac |
226 |
Q |
| |
|
||||| ||||||||||||||||||| |
|
|
| T |
43112385 |
gttctatccaaagaatccaacccaac |
43112410 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 5 - 203
Target Start/End: Original strand, 20385369 - 20385567
Alignment:
| Q |
5 |
ctactactcaacaatgcatatttaaa-tatatcttacacctcaacatggtcaactcgcgacacaacaacttttgacaatggaatccaacaactt-gtata |
102 |
Q |
| |
|
||||||| ||||| |||||||||||| ||| |||||||||||| ||||||||||| |||||||||||||| ||||||||||| ||||||||| ||||| |
|
|
| T |
20385369 |
ctactacacaacagtgcatatttaaaatatgacttacacctcaatgtggtcaactcgtgacacaacaactttcgacaatggaattcaacaactttgtata |
20385468 |
T |
|
| Q |
103 |
ttctatttaaatgcaattatgcataaatcagcaatcaacaatcaatcatattcaaatcaacagctcgggtaaaataacataattaatcataattatttat |
202 |
Q |
| |
|
|| |||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
20385469 |
ttttatt--aatgcaattatacataaatcaacaatcaacaatcaatcatattcaaatcaacagctctggtaaaataacataattaatcataattatttat |
20385566 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 21 - 212
Target Start/End: Complemental strand, 22434499 - 22434314
Alignment:
| Q |
21 |
catatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaacttttgacaatggaatccaacaacttgtatattctatttaaatgcaatt |
120 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||| || |||||||||||||||| |||||||||| |||| |
|
|
| T |
22434499 |
catatttaaatatgacttacacctcaacatggtcaacttgtgacacaacaacttttgacaatggcattcaacaacttgtatattttatttaaatgtaatt |
22434400 |
T |
|
| Q |
121 |
atgcataaatcagcaatcaacaatcaatcatattcaaatcaacagctcgggt-aaaataacataattaatcataattatttattctacccaaa |
212 |
Q |
| |
|
|| |||| |||||||||||||||||||||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
22434399 |
atacata-------aatcaacaatcaatcatattcaaatcaacagctctagtaaaaatagcataattaatcataattatttattctacccaaa |
22434314 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 22521805 - 22521607
Alignment:
| Q |
1 |
acaactactactcaacaatgcatattta--aatatatcttacacctcaacatggtcaactcgcgacacaacaacttttgacaatggaatccaacaacttg |
98 |
Q |
| |
|
|||||| |||||||||||||||||| || ||||| ||||||||||||||| ||||||| || |||||||| ||| | |||| ||| |||||||||| |
|
|
| T |
22521805 |
acaactgctactcaacaatgcatatatatgaatatgacttacacctcaacatagtcaactaatgatacaacaacctttaaaaatgaaattcaacaacttg |
22521706 |
T |
|
| Q |
99 |
tatattctatttaaatgcaattatgcataaatcagcaatcaacaatcaatcatattcaaatcaacagctcgggtaaaataacataattaatcataattat |
198 |
Q |
| |
|
|||| | ||||||||| |||||| ||||| |||||||||||||| |||||| | || |||| ||||| ||| ||||||||||||||||||||| ||| |
|
|
| T |
22521705 |
tataatttatttaaatataattatacataa--cagcaatcaacaattcatcatacttaattcaatagctccggt-aaataacataattaatcataactat |
22521609 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 36 - 200
Target Start/End: Complemental strand, 15003961 - 15003796
Alignment:
| Q |
36 |
cttacacctcaacatggtcaactcgcgacacaacaacttttg-acaatggaatccaacaacttgtatattctatttaaatgcaattatgcataaatcagc |
134 |
Q |
| |
|
||||||||||||||| ||||| | | ||||||||||| |||| |||| || || ||| | |||||||| | ||||||||| || ||| ||| || || | |
|
|
| T |
15003961 |
cttacacctcaacattgtcaatttgtgacacaacaacctttgtacaacggtattcaaaatcttgtataatttatttaaatataaatatacatcaaacaac |
15003862 |
T |
|
| Q |
135 |
aatcaacaatcaatcatattcaaatcaacagctcgggtaaaataacataattaatcataattattt |
200 |
Q |
| |
|
|| |||||||||||||||||||| ||||||||| ||||||||| |||||||||||||||| |||| |
|
|
| T |
15003861 |
aaacaacaatcaatcatattcaactcaacagctttggtaaaatagcataattaatcataatcattt |
15003796 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 42 - 200
Target Start/End: Original strand, 15267399 - 15267555
Alignment:
| Q |
42 |
cctcaacatggtcaactcgcgacacaacaacttttgacaatggaatccaacaacttgtatattctatttaaatgcaattatgcataaatcagcaatcaac |
141 |
Q |
| |
|
||||||||| ||||||| || |||||||| ||||| |||| ||| |||||||||||||| | ||||||||| || ||| ||||| ||||||||||| |
|
|
| T |
15267399 |
cctcaacatagtcaactaatgatacaacaacctttgaaaatgaaattcaacaacttgtataatttatttaaatataaatatacataa--cagcaatcaac |
15267496 |
T |
|
| Q |
142 |
aatcaatcatattcaaatcaacagctcgggtaaaataacataattaatcataattattt |
200 |
Q |
| |
|
||| |||||| | || |||||||||| |||||||||||| |||||||||||| ||||| |
|
|
| T |
15267497 |
aattcatcatacttaattcaacagctccggtaaaataacacaattaatcataactattt |
15267555 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 21415466 - 21415417
Alignment:
| Q |
1 |
acaactactactcaacaatgcatatttaaatatatcttacacctcaacat |
50 |
Q |
| |
|
||||||| ||| ||||| ||||||||||||||| |||||||||||||||| |
|
|
| T |
21415466 |
acaactattacccaacagtgcatatttaaatatgtcttacacctcaacat |
21415417 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 142
Target Start/End: Original strand, 19989376 - 19989456
Alignment:
| Q |
62 |
gacacaacaacttttgacaatggaatccaacaacttgtatattctatttaaatgcaattatgcataaatcagcaatcaaca |
142 |
Q |
| |
|
||||||||||| || ||||||| |||||||||| ||||||| | ||||||| || |||||| || || ||| ||||||||| |
|
|
| T |
19989376 |
gacacaacaaccttcgacaatgaaatccaacaatttgtataatttatttaagtgtaattatacacaattcaacaatcaaca |
19989456 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 161
Target Start/End: Original strand, 22616797 - 22616953
Alignment:
| Q |
5 |
ctactactcaacaatgcatatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaacttttgacaatggaatccaacaacttgtatatt |
104 |
Q |
| |
|
||||||| || |||||||||| ||||||| |||| | |||||| |||||||| || |||| |||| || ||| |||||| |||||||||||||| | |
|
|
| T |
22616797 |
ctactacacatcaatgcatatataaatatgacttatgcatcaacaaggtcaactagcaacaccgcaacattcaacattggaattcaacaacttgtataat |
22616896 |
T |
|
| Q |
105 |
ctatttaaatgcaattatgcataaatcagcaatcaacaatcaatcatattcaaatca |
161 |
Q |
| |
|
|||||| || ||||||| | ||||| |||||| ||||| |||||| ||||||| |
|
|
| T |
22616897 |
ttatttacatacaattatactcaaatccacaatcagtaatcattcatatgcaaatca |
22616953 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 164
Target Start/End: Complemental strand, 7301206 - 7301132
Alignment:
| Q |
90 |
aacaacttgtatattctatttaaatgcaattatgcataaatcagcaatcaacaatcaatcatattcaaatcaaca |
164 |
Q |
| |
|
|||| |||||||| |||| || |||||| ||||||||||| || ||||||||| |||||||||||| |||||| |
|
|
| T |
7301206 |
aacatcttgtataatctaattgaatgcatttatgcataaaccaacaatcaacagcaaatcatattcaattcaaca |
7301132 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 139
Target Start/End: Complemental strand, 21861399 - 21861322
Alignment:
| Q |
62 |
gacacaacaacttttgacaatggaatccaacaacttgtatattctatttaaatgcaattatgcataaatcagcaatca |
139 |
Q |
| |
|
||||||||||| || ||||||| | |||||||||||||||| | | ||| | || |||||| ||||||||| |||||| |
|
|
| T |
21861399 |
gacacaacaaccttcgacaatgaattccaacaacttgtataatttgtttgagtgaaattatacataaatcaacaatca |
21861322 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 139
Target Start/End: Complemental strand, 38185855 - 38185778
Alignment:
| Q |
62 |
gacacaacaacttttgacaatggaatccaacaacttgtatattctatttaaatgcaattatgcataaatcagcaatca |
139 |
Q |
| |
|
||||||||||| |||||||||| | |||||| ||||||||| | | ||| | || |||||| ||||||||| |||||| |
|
|
| T |
38185855 |
gacacaacaacctttgacaatgaattccaaccacttgtataatttgtttgagtgaaattatacataaatcaacaatca |
38185778 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 164; Significance: 8e-88; HSPs: 9)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 164; E-Value: 8e-88
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 33662465 - 33662243
Alignment:
| Q |
1 |
acaactactactcaacaatgcatatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaacttttgacaatggaatccaacaacttgta |
100 |
Q |
| |
|
||||||||||||||||| ||||||||||||||| ||||||||||||||||||| |||||| ||||| || |||||||||||||||||||||||||||||| |
|
|
| T |
33662465 |
acaactactactcaacagtgcatatttaaatatgtcttacacctcaacatggttaactcgtgacacgacgacttttgacaatggaatccaacaacttgta |
33662366 |
T |
|
| Q |
101 |
tattctatttaaatgcaattatgcataaatcagcaatcaacaatcaatcatattcaaatcaacagctcgggtaaaataacataattaatcataattattt |
200 |
Q |
| |
|
||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||| | ||||||||||||||| |||| |||||||| |
|
|
| T |
33662365 |
tattctaattaaatgcaactatgcataaatcagcaatcaacaatcaat-atattcgaatcaacagctctgataaaataacataatttatcacaattattt |
33662267 |
T |
|
| Q |
201 |
attctacccaaagaatccaaccca |
224 |
Q |
| |
|
|||||||||||||||||||||||| |
|
|
| T |
33662266 |
attctacccaaagaatccaaccca |
33662243 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 5 - 191
Target Start/End: Complemental strand, 16371612 - 16371426
Alignment:
| Q |
5 |
ctactactcaacaatgcatatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaacttttgacaatggaatccaacaacttgtatatt |
104 |
Q |
| |
|
||||||| || || ||||||| ||||||| ||||||| ||||||||||||||| | |||||||||| || ||||||||||| |||||||||||||| | |
|
|
| T |
16371612 |
ctactacacagcagtgcatatataaatatgacttacacatcaacatggtcaactagtaacacaacaaccttcgacaatggaattcaacaacttgtataat |
16371513 |
T |
|
| Q |
105 |
ctatttaaatgcaattatgcataaatcagcaatcaacaatcaatcatattcaaatcaacagctcgggtaaaataacataattaatca |
191 |
Q |
| |
|
|||||| |||| ||||| ||||||| ||||||| ||||| | |||||||||||| || ||| | |||||||| ||||||||||| |
|
|
| T |
16371512 |
ttatttacatgcgattatacataaattcacaatcaataatcatttatattcaaatcagcaactctgataaaataatataattaatca |
16371426 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 19 - 191
Target Start/End: Complemental strand, 15416754 - 15416582
Alignment:
| Q |
19 |
tgcatatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaacttttgacaatggaatccaacaacttgtatattctatttaaatgcaa |
118 |
Q |
| |
|
||||||| ||||||| ||||||| ||||||||||||||| ||||||||||| || |||| |||||| ||||||||||||| | |||||| |||||| |
|
|
| T |
15416754 |
tgcatatataaatatgacttacacatcaacatggtcaactaatgacacaacaaccttcgacattggaatttaacaacttgtataatttatttacatgcaa |
15416655 |
T |
|
| Q |
119 |
ttatgcataaatcagcaatcaacaatcaatcatattcaaatcaacagctcgggtaaaataacataattaatca |
191 |
Q |
| |
|
|||| || |||| ||||||||||||| |||||||||||||| || ||| |||||||| ||||||||||| |
|
|
| T |
15416654 |
ttatacaataatccacaatcaacaatcattcatattcaaatcagcaactctaataaaataatataattaatca |
15416582 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 36 - 200
Target Start/End: Original strand, 13881600 - 13881763
Alignment:
| Q |
36 |
cttacacctcaacatggtcaactcgcgacacaacaacttttg-acaatggaatccaacaacttgtatattctatttaaatgcaattatgcataaatcagc |
134 |
Q |
| |
|
||||||||||||||| ||||| | | ||||||||||| |||| ||||||| || ||| |||||||||| | ||||||||| | ||| ||| || || | |
|
|
| T |
13881600 |
cttacacctcaacattgtcaatttgtgacacaacaacctttgtacaatggtattcaaaaacttgtataatttatttaaatata--tatacatcaaacaac |
13881697 |
T |
|
| Q |
135 |
aatcaacaatcaatcatattcaaatcaacagctcgggtaaaataacataattaatcataattattt |
200 |
Q |
| |
|
||||| ||||||||||||||||| || |||||| ||||||||| |||||||| ||||| |||||| |
|
|
| T |
13881698 |
aatcagcaatcaatcatattcaactctgcagctctggtaaaatagcataattattcatagttattt |
13881763 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 21189998 - 21189933
Alignment:
| Q |
1 |
acaactactactcaacaatgcatatttaaatatatcttacacctcaacatggtcaactcgcgacac |
66 |
Q |
| |
|
||||||||||||| ||||||||||||||||||| ||||||||||| |||| ||||||| ||||||| |
|
|
| T |
21189998 |
acaactactactctacaatgcatatttaaatatgtcttacacctccacatagtcaacttgcgacac |
21189933 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 5 - 200
Target Start/End: Original strand, 13877941 - 13878137
Alignment:
| Q |
5 |
ctactactcaacaatgcatatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaacttttg-acaatggaatccaacaacttgtatat |
103 |
Q |
| |
|
||||||| ||||| |||||||||| || ||||||||||||||| |||| | | ||||||||||| |||| ||||||| | ||| |||||||||| |
|
|
| T |
13877941 |
ctactacacaacagtgcatatttattcatgacttacacctcaacattgtcagtttgtgacacaacaacctttgtacaatggttttcaaaaacttgtataa |
13878040 |
T |
|
| Q |
104 |
tctatttaaatgcaattatgcataaatcagcaatcaacaatcaatcatattcaaatcaacagctcgggtaaaataacataattaatcataattattt |
200 |
Q |
| |
|
| ||||||||| || ||| ||| || || |||||| |||| |||||||||||| || ||||| ||||||||| |||||||| ||||| |||||| |
|
|
| T |
13878041 |
tttatttaaatataaatatacatcaaacaacaatcagcaattaatcatattcaactctgcagctatggtaaaatagcataattattcatagttattt |
13878137 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 191
Target Start/End: Original strand, 32489936 - 32490120
Alignment:
| Q |
5 |
ctactactcaacaatgcatatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaacttttgacaatggaatccaacaacttgtatatt |
104 |
Q |
| |
|
||||||| ||||||||||||| ||||||| |||||| |||||||| |||||| || |||| ||||| | ||| || ||| |||||||||||||| | |
|
|
| T |
32489936 |
ctactacacaacaatgcatatataaatatgacttaca--tcaacatgatcaactagcaacactacaacactcaacattgaaattcaacaacttgtataat |
32490033 |
T |
|
| Q |
105 |
ctatttaaatgcaattatgcataaatcagcaatcaacaatcaatcatattcaaatcaacagctcgggtaaaataacataattaatca |
191 |
Q |
| |
|
||||| || ||||||| | ||||| |||||||||||| |||||| ||||||| || ||| | ||||| | ||||||||||| |
|
|
| T |
32490034 |
ttattttcatacaattatacttaaatacacaatcaacaatccttcatatacaaatcagcaactcagataaaacattataattaatca |
32490120 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 200
Target Start/End: Original strand, 15318162 - 15318356
Alignment:
| Q |
3 |
aactactactcaacaatgcatatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaacttttgacaatggaatccaacaacttgtata |
102 |
Q |
| |
|
|||| |||||||||||||||||| | |||| ||||| || |||||| |||||| || ||| |||| ||||| |||| ||| |||||||||||||| |
|
|
| T |
15318162 |
aactgctactcaacaatgcatatatgtatatgacttactccacaacatagtcaaccaaggatacatcaacctttga-aatgaaattcaacaacttgtata |
15318260 |
T |
|
| Q |
103 |
ttctatttaaatgcaattatgcataaatcagcaatcaacaatcaatcatattcaaatcaacagctcgggtaaaataacataattaatcataattattt |
200 |
Q |
| |
|
| ||||||||| || ||| || || |||||||||||||| |||||| | || | |||||||| ||||||||| || |||||||||| |||||| |
|
|
| T |
15318261 |
gtttatttaaatataaatatacacaa--cagcaatcaacaattcatcatacttaatttaacagctctggtaaaatagcacgattaatcatagttattt |
15318356 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 89 - 155
Target Start/End: Complemental strand, 27849333 - 27849267
Alignment:
| Q |
89 |
caacaacttgtatattctatttaaatgcaattatgcataaatcagcaatcaacaatcaatcatattc |
155 |
Q |
| |
|
|||||||||||||| | | |||||||| |||||| ||||||||| |||||||| |||| |||||||| |
|
|
| T |
27849333 |
caacaacttgtataatttgtttaaatgaaattatacataaatcaacaatcaaccatcattcatattc |
27849267 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0034 (Bit Score: 161; Significance: 5e-86; HSPs: 1)
Name: scaffold0034
Description:
Target: scaffold0034; HSP #1
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 34798 - 34575
Alignment:
| Q |
1 |
acaactactactcaacaatgcatatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaacttttgacaatggaatccaacaacttgta |
100 |
Q |
| |
|
||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||||| || ||||||||||||||||||||||||| |||| |
|
|
| T |
34798 |
acaactactactcaacagtgcatatttaaatatgtcttacacctcaacatggtcaactcgtgacacgacgacttttgacaatggaatccaacaacatgta |
34699 |
T |
|
| Q |
101 |
tattctatttaaatgcaattatgcataaatcagcaatcaacaatcaatcatattcaaatcaacagctcgggtaaaataacataattaatcataattattt |
200 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||| | |||| |||||||||| |||| |||||||| |
|
|
| T |
34698 |
tattctatttaaatgcaactatgcataaatcagcaaccaacaatcaat-atattcaaatcaacagctctgataaattaacataatttatcacaattattt |
34600 |
T |
|
| Q |
201 |
attctacccaaagaatccaacccaa |
225 |
Q |
| |
|
|||||||||||||||||||| |||| |
|
|
| T |
34599 |
attctacccaaagaatccaatccaa |
34575 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 158; Significance: 3e-84; HSPs: 11)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 23375077 - 23375301
Alignment:
| Q |
1 |
acaactactactcaacaatgcatatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaacttttgacaatggaatccaacaacttgta |
100 |
Q |
| |
|
||||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
23375077 |
acaactactactcaacagtgcatatttaaatatgtcttacaccttaacatggtcaactcatgacacaacgacttttgacaatggaatccaacaacttgta |
23375176 |
T |
|
| Q |
101 |
tattctatttaaatgcaattatgcataaatcagcaatcaacaatcaatcatattcaaatcaacagctcgggtaaaataacataattaatcataattattt |
200 |
Q |
| |
|
|||||||||||||||||| |||||||||||||| |||||||||||||| |||||||||||||||||| ||||||||||||||||| ||||||| ||||| |
|
|
| T |
23375177 |
tattctatttaaatgcaactatgcataaatcagaaatcaacaatcaat-atattcaaatcaacagcttaggtaaaataacataattcatcataactattt |
23375275 |
T |
|
| Q |
201 |
attctacccaaagaatccaacccaac |
226 |
Q |
| |
|
||| |||||||||||||||||||| |
|
|
| T |
23375276 |
gttccccccaaagaatccaacccaac |
23375301 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 40261440 - 40261649
Alignment:
| Q |
1 |
acaactactactcaacaatgcatatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaacttttgacaatggaatccaacaactt-gt |
99 |
Q |
| |
|
||||||||||| ||||| ||||||||||||||| | |||| |||||||||||||||| | |||||||||||||||| |||||| || ||||||||| || |
|
|
| T |
40261440 |
acaactactacacaacagtgcatatttaaatatgacgtacatctcaacatggtcaacttgtgacacaacaacttttggcaatggcattcaacaactttgt |
40261539 |
T |
|
| Q |
100 |
atattctatttaaatgcaattatgcataaatcagcaatcaacaatcaatcatattcaaatcaacagctcgggt-aaaataacataattaatcataattat |
198 |
Q |
| |
|
||||| || ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |
|
|
| T |
40261540 |
atattttaattaaatgcaattacacataaatcaacaatcaacaatcaatcatattcaaatcaacagctctggtaaaaataacataattaatcataattat |
40261639 |
T |
|
| Q |
199 |
ttattctacc |
208 |
Q |
| |
|
||| |||||| |
|
|
| T |
40261640 |
ttactctacc |
40261649 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 23085559 - 23085772
Alignment:
| Q |
1 |
acaactactactcaacaatgcatatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaacttttgacaatggaatccaacaacttgta |
100 |
Q |
| |
|
||||||||||| ||||| ||||||||||||||| | |||| |||||||||||||||| | ||| | |||||||||| |||||| || |||||||||||| |
|
|
| T |
23085559 |
acaactactacacaacagtgcatatttaaatatgacgtacatctcaacatggtcaacttgtgactctacaacttttggcaatggcattcaacaacttgta |
23085658 |
T |
|
| Q |
101 |
tattctatttaaatgcaattatgcata-aatcagcaatcaacaatcaatcatattcaaatcaacagctcgggta-aaataacataattaatcataattat |
198 |
Q |
| |
|
|| | ||||||||| |||||| |||| || | ||||||| |||||||||||||||||||||||||| |||| ||| ||||||||||| ||||||||| |
|
|
| T |
23085659 |
taatttatttaaatacaattacacatagaacaatcaatcaataatcaatcatattcaaatcaacagctttggtagaaacaacataattaaccataattat |
23085758 |
T |
|
| Q |
199 |
ttattctacccaaa |
212 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
23085759 |
ttattctacccaaa |
23085772 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 5 - 211
Target Start/End: Original strand, 24160429 - 24160635
Alignment:
| Q |
5 |
ctactactcaacaatgcatatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaacttttgacaatggaatccaacaacttgtatatt |
104 |
Q |
| |
|
||||||| || || ||||||| ||||||| ||||||| ||||||||||||||| |||| |||||| || ||||||||||| |||||||||||||| | |
|
|
| T |
24160429 |
ctactacacagcagtgcatatataaatatgacttacacatcaacatggtcaactaatgacataacaaccttcgacaatggaattcaacaacttgtataat |
24160528 |
T |
|
| Q |
105 |
ctatttaaatgcaattatgcataaatcagcaatcaacaatcaatcatattcaaatcaacagctcgggtaaaataacataattaatcataattatttattc |
204 |
Q |
| |
|
|||||| |||||||||| |||||||| ||||||||||||| |||||||||||||| || ||| | |||||||| ||||||||||| |||||||| | |
|
|
| T |
24160529 |
ttatttacatgcaattatacataaatccacaatcaacaatcattcatattcaaatcagcaactctgataaaataatataattaatcaggattatttaata |
24160628 |
T |
|
| Q |
205 |
tacccaa |
211 |
Q |
| |
|
||||||| |
|
|
| T |
24160629 |
tacccaa |
24160635 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 4 - 191
Target Start/End: Original strand, 21903327 - 21903515
Alignment:
| Q |
4 |
actactactcaacaatgcatatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaacttttgacaatggaatccaacaacttgtatat |
103 |
Q |
| |
|
|||||||| ||||| ||||||||||||||| | |||| |||||||||||||||| | |||| ||||||||||| |||||| || |||||||||||||| |
|
|
| T |
21903327 |
actactacacaacagtgcatatttaaatatgacgtacatctcaacatggtcaacttgtgacataacaacttttgtcaatggcattcaacaacttgtataa |
21903426 |
T |
|
| Q |
104 |
tctatttaaatgcaattatgcataaatcagcaatcaacaatcaatcatattcaaatcaacagctcgggta-aaataacataattaatca |
191 |
Q |
| |
|
| ||||||||| |||||| |||| || ||||||| ||||||||||||||||||||||||||| ||| ||| |||||||||||||| |
|
|
| T |
21903427 |
tttatttaaatataattatacataggacaacaatcaataatcaatcatattcaaatcaacagctctagtagaaacaacataattaatca |
21903515 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 96 - 212
Target Start/End: Complemental strand, 20353253 - 20353137
Alignment:
| Q |
96 |
ttgtatattctatttaaatgcaattatgcataaatcagcaatcaacaatcaatcatattcaaatcaacagctcgggt-aaaataacataattaatcataa |
194 |
Q |
| |
|
||||||||| ||||||||| ||||||| |||||| || ||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||| |
|
|
| T |
20353253 |
ttgtatattttatttaaattcaattatacataaaacaacaatcaacaatcaatcatattcaaatcaacagctctggtaaaaataacataa-taatcataa |
20353155 |
T |
|
| Q |
195 |
ttatttattctacccaaa |
212 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
20353154 |
ttatttattctacccaaa |
20353137 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 43 - 200
Target Start/End: Original strand, 22841166 - 22841321
Alignment:
| Q |
43 |
ctcaacatggtcaactcgcgacacaacaacttttgacaatggaatccaacaacttgtatattctatttaaatgcaattatgcataaatcagcaatcaaca |
142 |
Q |
| |
|
|||||||| ||||||| || |||||||| ||||| |||| ||| |||||||||||||| | ||||||||| || ||| ||||| ||||||||| || |
|
|
| T |
22841166 |
ctcaacatagtcaactaatgatacaacaacctttgaaaatgaaattcaacaacttgtataatttatttaaatataaatatacataa--cagcaatcagca |
22841263 |
T |
|
| Q |
143 |
atcaatcatattcaaatcaacagctcgggtaaaataacataattaatcataattattt |
200 |
Q |
| |
|
|| |||||| | || |||||||||| |||||||||||| |||||||||||| ||||| |
|
|
| T |
22841264 |
attcatcatacttaattcaacagctccggtaaaataacacaattaatcataactattt |
22841321 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 5 - 156
Target Start/End: Original strand, 22109588 - 22109740
Alignment:
| Q |
5 |
ctactactcaacaatgcatatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaacttttg-acaatggaatccaacaacttgtatat |
103 |
Q |
| |
|
||||||| |||||||||||||||| || ||||||||||||||| ||||| ||| ||||||||||| |||| ||||||| || ||| | |||||||| |
|
|
| T |
22109588 |
ctactacacaacaatgcatatttattcatgacttacacctcaacattgtcaattcgtgacacaacaacctttgcacaatggtattcaaaatcttgtataa |
22109687 |
T |
|
| Q |
104 |
tctatttaaatgcaattatgcataaatcagcaatcaacaatcaatcatattca |
156 |
Q |
| |
|
| ||||||||| || ||| ||| || || ||| ||||||||||||||||||| |
|
|
| T |
22109688 |
tttatttaaatataaatatacatcaaacaacaaacaacaatcaatcatattca |
22109740 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 5 - 77
Target Start/End: Complemental strand, 20353323 - 20353251
Alignment:
| Q |
5 |
ctactactcaacaatgcatatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaacttttg |
77 |
Q |
| |
|
||||||| ||||| |||||| |||||||| ||||||||||||||||||||||| | |||||||||||||||| |
|
|
| T |
20353323 |
ctactacacaacagtgcatacttaaatatgacttacacctcaacatggtcaacttgtgacacaacaacttttg |
20353251 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 44 - 199
Target Start/End: Original strand, 25651426 - 25651580
Alignment:
| Q |
44 |
tcaacatggtcaactcgcgacacaacaacttttgacaatggaatccaacaacttgtatattctatttaaatgcaattatgcataaatcagcaatcaacaa |
143 |
Q |
| |
|
||||||||||||||| || |||| ||||| || ||| |||||| ||||||||| |||| | | |||| || |||| || | |||||| |||||||||| |
|
|
| T |
25651426 |
tcaacatggtcaactagcaacaccacaacattcaacattggaattcaacaacttatataatttgtttacatacaatcatactcaaatcaacaatcaacaa |
25651525 |
T |
|
| Q |
144 |
tcaatcatattcaaatcaacagctcgggtaaaataacataattaatcataattatt |
199 |
Q |
| |
|
||| |||||| | |||||||| ||| | ||||||| ||||||||||||||||||| |
|
|
| T |
25651526 |
tcattcatatac-aatcaacaactctgataaaatattataattaatcataattatt |
25651580 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 10040068 - 10039933
Alignment:
| Q |
1 |
acaactactactcaacaatgcatatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaacttttgacaatggaatccaacaacttgta |
100 |
Q |
| |
|
|||||| |||| ||| ||||||||| | ||||| ||||| | ||||||||||||||| ||||||||||| || | ||||| | | |||||||||||| |
|
|
| T |
10040068 |
acaactgctacacaataatgcatatatgaatatgacttactcatcaacatggtcaactat-gacacaacaaccttcggcaatgaatttcaacaacttgta |
10039970 |
T |
|
| Q |
101 |
tattctatttaaatgcaattatgcataaatcagcaat |
137 |
Q |
| |
|
|| | | |||||||| |||||| ||||||||| |||| |
|
|
| T |
10039969 |
taatttgtttaaatgtaattatacataaatcaacaat |
10039933 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 154; Significance: 8e-82; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 28204620 - 28204400
Alignment:
| Q |
1 |
acaactactactcaacaatgcatatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaacttttgacaatggaatccaacaacttgta |
100 |
Q |
| |
|
|||||||||||| |||| ||||||||||||||| ||||||||||||||||||| |||||| ||||| || |||||||||||||||||||||||||||||| |
|
|
| T |
28204620 |
acaactactactaaacagtgcatatttaaatatgtcttacacctcaacatggttaactcgtgacacgacgacttttgacaatggaatccaacaacttgta |
28204521 |
T |
|
| Q |
101 |
tattctatttaaatgcaattatgcataaatcagcaatcaacaatcaatcatattcaaatcaacagctcgggtaaaataacataattaatcataattattt |
200 |
Q |
| |
|
||||||| ||||| |||| ||||||||||||||||||||||||||||| ||||||||||||||||||| | ||||||||||||||| |||| |||||||| |
|
|
| T |
28204520 |
tattctaattaaacgcaactatgcataaatcagcaatcaacaatcaat-atattcaaatcaacagctctgataaaataacataatttatcacaattattt |
28204422 |
T |
|
| Q |
201 |
attctacccaaagaatccaacc |
222 |
Q |
| |
|
||||||||| |||||||||||| |
|
|
| T |
28204421 |
attctacccgaagaatccaacc |
28204400 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 21118133 - 21117996
Alignment:
| Q |
1 |
acaactactactcaacaatgcatatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaacttttgacaatggaatccaacaacttgta |
100 |
Q |
| |
|
|||||| |||| ||||||||||||| | ||||| |||| | ||||||||||||||| ||||||||||| || ||||||| ||| |||||||||||| |
|
|
| T |
21118133 |
acaactgctacacaacaatgcatatatgaatatgagttactcatcaacatggtcaactat-gacacaacaaccttggacaatgaaattcaacaacttgta |
21118035 |
T |
|
| Q |
101 |
tattctatttaaatgcaattatgcataaatcagcaatca |
139 |
Q |
| |
|
|| | | ||||||||||||||| ||||||||| |||||| |
|
|
| T |
21118034 |
taatttgtttaaatgcaattatacataaatcaacaatca |
21117996 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 36 - 200
Target Start/End: Original strand, 20901325 - 20901490
Alignment:
| Q |
36 |
cttacacctcaacatggtcaactcgcgacacaacaacttttg-acaatggaatccaacaacttgtatattctatttaaatgcaattatgcataaatcagc |
134 |
Q |
| |
|
||||||||||||||| |||| | | ||||||||||| |||| | ||||| || ||| |||||||||| | ||||||||| || ||| ||| || || | |
|
|
| T |
20901325 |
cttacacctcaacattatcaatttgtgacacaacaacctttgtataatggtattcaaaaacttgtataatttatttaaatataaatatacatcaaacaac |
20901424 |
T |
|
| Q |
135 |
aatcaacaatcaatcatattcaaatcaacagctcgggtaaaataacataattaatcataattattt |
200 |
Q |
| |
|
|||||||||||| ||||||| | ||| |||||| ||||||||| |||||||||| |||||||||| |
|
|
| T |
20901425 |
aatcaacaatcagtcatatttgactcagcagctctggtaaaatagcataattaattataattattt |
20901490 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 151
Target Start/End: Original strand, 24960251 - 24960313
Alignment:
| Q |
89 |
caacaacttgtatattctatttaaatgcaattatgcataaatcagcaatcaacaatcaatcat |
151 |
Q |
| |
|
|||||||||||||| | | ||||| || |||||| ||||||||| ||||||||||||| |||| |
|
|
| T |
24960251 |
caacaacttgtataatttgtttaagtgtaattatacataaatcaacaatcaacaatcattcat |
24960313 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0364 (Bit Score: 148; Significance: 3e-78; HSPs: 1)
Name: scaffold0364
Description:
Target: scaffold0364; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 5 - 226
Target Start/End: Original strand, 7270 - 7493
Alignment:
| Q |
5 |
ctactactcaacaatgcatatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaacttttgacaatggaatccaacaac-ttgtatat |
103 |
Q |
| |
|
||||||| | |||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||| |
|
|
| T |
7270 |
ctactacactacaatgcatattgaaatatgacttacacctcaacatggtcaactcgtgacacaacaacttttgacaatggaattcaacaactttgtatat |
7369 |
T |
|
| Q |
104 |
tctatttaaatgcaattatgcataaatcagcaatcaacaatcaatcatattcaaatcaacagctcgggt-aaaataacataattaatcataattatttat |
202 |
Q |
| |
|
| || |||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||||| |
|
|
| T |
7370 |
tttagttaaatgcaattatacataagtcaacaatcaacaatcaatcatattcaaatcaacagctctggtaaaaataacataattaatcctaattatttat |
7469 |
T |
|
| Q |
203 |
tctacccaaagaatccaacccaac |
226 |
Q |
| |
|
|||||| ||||||||||||||||| |
|
|
| T |
7470 |
tctacctaaagaatccaacccaac |
7493 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 132; Significance: 1e-68; HSPs: 5)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 5 - 225
Target Start/End: Complemental strand, 21980932 - 21980709
Alignment:
| Q |
5 |
ctactactcaacaatgcatatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaacttttgacaatggaatccaacaactt-gtatat |
103 |
Q |
| |
|
||||||| ||||| ||||||||||||||| |||||| ||| |||||||||||||| || |||||||||||||| |||||||| ||||||||| |||| | |
|
|
| T |
21980932 |
ctactacacaacagtgcatatttaaatatgacttacatctccacatggtcaactcgtgatacaacaacttttgaaaatggaattcaacaactttgtattt |
21980833 |
T |
|
| Q |
104 |
tct-atttaaatgcaattatgcataaatcagcaatcaacaatcaatcatattcaaatcaacagctcgggtaaaa-taacataattaatcataattattta |
201 |
Q |
| |
|
| | | |||||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||| |
|
|
| T |
21980832 |
ttttaattaaatgcaattatacataaatcaacaatcaacaatcaatcatattcaaatcagcagctctggtaaaaataacataattaatcataattattta |
21980733 |
T |
|
| Q |
202 |
ttctacccaaagaatccaacccaa |
225 |
Q |
| |
|
|||||||||||||||||||||||| |
|
|
| T |
21980732 |
ttctacccaaagaatccaacccaa |
21980709 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 5 - 212
Target Start/End: Complemental strand, 21559339 - 21559137
Alignment:
| Q |
5 |
ctactactcaacaatgcatatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaacttttgacaatggaatccaacaac-ttgtatat |
103 |
Q |
| |
|
||||||| ||| | ||||||||||||||| |||| |||||||||||| ||||| | ||||||||||||||||||||||| || ||||||| |||||||| |
|
|
| T |
21559339 |
ctactacacaatagtgcatatttaaatatgacttatacctcaacatgggcaacttgtgacacaacaacttttgacaatggcattcaacaactttgtatat |
21559240 |
T |
|
| Q |
104 |
tctatttaaatgcaattatgcataaatcagcaatcaacaatcaatcatattcaaatcaacagctcgggt-aaaataacataattaatcataattatttat |
202 |
Q |
| |
|
| |||||||||||||||| |||| | |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| |
|
|
| T |
21559239 |
tttatttaaatgcaattacacata-------actcaacaatcaatcatattcaaatcaacagctctggtaaaaataacataattaatcataattatttat |
21559147 |
T |
|
| Q |
203 |
tctacccaaa |
212 |
Q |
| |
|
||||| |||| |
|
|
| T |
21559146 |
tctacgcaaa |
21559137 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 199
Target Start/End: Original strand, 7785343 - 7785537
Alignment:
| Q |
5 |
ctactactcaacaatgcatatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaacttttgacaatggaatccaacaacttgtatatt |
104 |
Q |
| |
|
||||||| ||||||||||||| ||||||| |||| | ||||||||||||||| || |||| ||||| | ||| || ||| |||||||||||||| | |
|
|
| T |
7785343 |
ctactacacaacaatgcatatataaatatgacttatgcatcaacatggtcaactagcaacaccacaacatccaacattgaaattcaacaacttgtataat |
7785442 |
T |
|
| Q |
105 |
ctatttaaatgcaattatgcataaatcagcaatcaacaatcaatcatattcaaatcaacagctcgggtaaaataacataattaatcataattatt |
199 |
Q |
| |
|
|||||| |||||||||| | |||||| ||||||||||||| |||||| ||||||| | ||| | ||||||| ||||||||||| ||||||| |
|
|
| T |
7785443 |
ttatttacatgcaattatacttaaatccacaatcaacaatcattcatatgcaaatcagcgactctgataaaatattataattaatcagaattatt |
7785537 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 66 - 141
Target Start/End: Original strand, 26753854 - 26753929
Alignment:
| Q |
66 |
caacaacttttgacaatggaatccaacaacttgtatattctatttaaatgcaattatgcataaatcagcaatcaac |
141 |
Q |
| |
|
||||||| || ||||||| |||||||||| ||||||| | ||||||| || |||||| |||||||||||||||||| |
|
|
| T |
26753854 |
caacaaccttcgacaatgaaatccaacaatttgtataatttatttaagtgtaattatacataaatcagcaatcaac |
26753929 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 27869616 - 27869566
Alignment:
| Q |
1 |
acaactactactcaa-caatgcatatttaaatatatcttacacctcaacat |
50 |
Q |
| |
|
||||||||||||||| || ||||||||||||||| |||||||||||||||| |
|
|
| T |
27869616 |
acaactactactcaaacagtgcatatttaaatatgtcttacacctcaacat |
27869566 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0371 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0371
Description:
Target: scaffold0371; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 5533 - 5746
Alignment:
| Q |
1 |
acaactactactcaacaatgcatatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaacttttgacaatggaatccaacaacttgta |
100 |
Q |
| |
|
||||||||||| ||||| ||||||||||||||| | |||| |||||||||||||||| | ||| | |||||||||| |||||| || |||||||||||| |
|
|
| T |
5533 |
acaactactacacaacagtgcatatttaaatatgacgtacatctcaacatggtcaacttgtgactctacaacttttgtcaatggcattcaacaacttgta |
5632 |
T |
|
| Q |
101 |
tattctatttaaatgcaattatgcata-aatcagcaatcaacaatcaatcatattcaaatcaacagctcgggta-aaataacataattaatcataattat |
198 |
Q |
| |
|
|| | ||||||||| ||||||| |||| || | ||||||| |||||||||||||||||||||||||| |||| ||| ||||||||||| ||||||||| |
|
|
| T |
5633 |
taatttatttaaatacaattatacatagaacaatcaatcaataatcaatcatattcaaatcaacagctttggtagaaacaacataattaaccataattat |
5732 |
T |
|
| Q |
199 |
ttattctacccaaa |
212 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
5733 |
ttattctacccaaa |
5746 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0149 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0149
Description:
Target: scaffold0149; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 27942 - 27729
Alignment:
| Q |
1 |
acaactactactcaacaatgcatatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaacttttgacaatggaatccaacaacttgta |
100 |
Q |
| |
|
||||||||||| ||||| ||||||||||||||| | |||| |||||||||||||||| | ||| | |||||||||| |||||| || |||||||||||| |
|
|
| T |
27942 |
acaactactacacaacagtgcatatttaaatatgacgtacatctcaacatggtcaacttgtgactctacaacttttgtcaatggcattcaacaacttgta |
27843 |
T |
|
| Q |
101 |
tattctatttaaatgcaattatgcata-aatcagcaatcaacaatcaatcatattcaaatcaacagctcgggta-aaataacataattaatcataattat |
198 |
Q |
| |
|
|| | ||||||||| ||||||| |||| || | ||||||| |||||||||||||||||||||||||| |||| ||| ||||||||||| ||||||||| |
|
|
| T |
27842 |
taatttatttaaatacaattatacatagaacaatcaatcaataatcaatcatattcaaatcaacagctttggtagaaacaacataattaaccataattat |
27743 |
T |
|
| Q |
199 |
ttattctacccaaa |
212 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
27742 |
ttattctacccaaa |
27729 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0090 (Bit Score: 92; Significance: 8e-45; HSPs: 1)
Name: scaffold0090
Description:
Target: scaffold0090; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 13 - 226
Target Start/End: Complemental strand, 32316 - 32102
Alignment:
| Q |
13 |
caacaatgcatatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaa-cttttgacaatggaatccaacaacttgtatattctattta |
111 |
Q |
| |
|
||||||||||||| | ||||| ||||||||| |||| ||||||| | |||||||||| | ||| |||||||||| |||||||||||||| | |||| | |
|
|
| T |
32316 |
caacaatgcatatatgaatatgatttacacctccacatagtcaactagtgacacaacaaacctttaacaatggaattcaacaacttgtataatttattaa |
32217 |
T |
|
| Q |
112 |
aatgcaattatgcataaatcagcaatcaacaatcaatcatattcaaatcaacagctcgggt-aaaataacataattaatcataattatttattctaccca |
210 |
Q |
| |
|
|||||||||| |||| |||| |||||| |||||||||| |||||||||| || ||| ||| ||||||||| |||||||||||||||||||||||| ||| |
|
|
| T |
32216 |
catgcaattatacatagatcaacaatcatcaatcaatcaaattcaaatcagcaactctggtaaaaataacacaattaatcataattatttattcta-cca |
32118 |
T |
|
| Q |
211 |
aagaatccaacccaac |
226 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
32117 |
aagaatccaacccaac |
32102 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0388 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0388
Description:
Target: scaffold0388; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 5 - 208
Target Start/End: Complemental strand, 15996 - 15792
Alignment:
| Q |
5 |
ctactactcaacaatgcatatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaacttttgacaatggaatccaacaacttgtatatt |
104 |
Q |
| |
|
||||||| ||||| ||||||| ||||||| |||| || ||||||||||||| | || |||||||| || ||||||| ||| |||||||||||||| | |
|
|
| T |
15996 |
ctactacacaacagtgcatatataaatatgacttatacttcaacatggtcaaacagtgatacaacaaccttcgacaatgaaattcaacaacttgtataat |
15897 |
T |
|
| Q |
105 |
ctatttaaatgcaattatgcataaatcagcaatcaacaatcaatcatattcaaatcaacagctcgggt-aaaataacataattaatcataattatttatt |
203 |
Q |
| |
|
|||||| |||||||||| |||| |||| |||||| ||||||||||||||||||||| || ||| || |||||| |||||||||||||||| ||||||| |
|
|
| T |
15896 |
ttatttacatgcaattatacatagatcaacaatcatcaatcaatcatattcaaatcagcaactctagtaaaaatagcataattaatcataatcatttatt |
15797 |
T |
|
| Q |
204 |
ctacc |
208 |
Q |
| |
|
||||| |
|
|
| T |
15796 |
ctacc |
15792 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0117 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0117
Description:
Target: scaffold0117; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 5 - 191
Target Start/End: Original strand, 33847 - 34035
Alignment:
| Q |
5 |
ctactactcaacaatgcatatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaacttttg-acaatggaatccaacaacttgtatat |
103 |
Q |
| |
|
||||||| ||||||| ||||||||||||| ||||||| ||||||| ||||||| | |||||||||| ||||| ||||||| || |||||||||||||| |
|
|
| T |
33847 |
ctactacacaacaattcatatttaaatatgacttacacttcaacattgtcaacttgtgacacaacaaattttgtacaatggtattcaacaacttgtataa |
33946 |
T |
|
| Q |
104 |
tctatttaaatgcaattatgcataaatcagcaatcaacaatcaatcatattcaaatcaacagctcgggta-aaataacataattaatca |
191 |
Q |
| |
|
| ||||||||| |||||| |||| || ||||||| ||||||||||||||||||||||| ||| ||| |||||||||||||||||| |
|
|
| T |
33947 |
tttatttaaatataattatacataggacaacaatcaataatcaatcatattcaaatcaacaactctagtagaaataacataattaatca |
34035 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0485 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0485
Description:
Target: scaffold0485; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 2924 - 3123
Alignment:
| Q |
1 |
acaactactactcaacaatgcatatttaaatatat--cttacacctcaacatggtcaactcgcgacacaacaacttttgacaatggaatccaacaacttg |
98 |
Q |
| |
|
|||||| |||||||||| ||||||| || | |||| |||||||||||||||| |||||| || |||||||| ||||| |||| ||| |||||||||| |
|
|
| T |
2924 |
acaactgctactcaacagtgcatatatataaatatgacttacacctcaacatgatcaactaatgatacaacaacctttgaaaatgaaattcaacaacttg |
3023 |
T |
|
| Q |
99 |
tatattctatttaaatgcaattatgcataaatcagcaatcaacaatcaatcatattcaaatcaacagctcgggtaaaataacataattaatcataattat |
198 |
Q |
| |
|
|||| | ||||||||| || ||| ||||| |||||||||||||| |||||| |||| |||||||||| |||||||||||| |||||||||||| ||| |
|
|
| T |
3024 |
tataatttatttaaatataaatatacataa--cagcaatcaacaattcatcatactcaactcaacagctccggtaaaataacacaattaatcataactat |
3121 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0016 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0016
Description:
Target: scaffold0016; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 19 - 191
Target Start/End: Complemental strand, 182919 - 182747
Alignment:
| Q |
19 |
tgcatatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaacttttgacaatggaatccaacaacttgtatattctatttaaatgcaa |
118 |
Q |
| |
|
||||||| ||||||| ||||||| |||||||| |||||| || | |||||||| || ||||||| ||| |||||||||||||||| ||||| |||||| |
|
|
| T |
182919 |
tgcatatataaatatgacttacacatcaacatgatcaactagcaagacaacaaccttcgacaatgaaattcaacaacttgtatattttatttgcatgcaa |
182820 |
T |
|
| Q |
119 |
ttatgcataaatcagcaatcaacaatcaatcatattcaaatcaacagctcgggtaaaataacataattaatca |
191 |
Q |
| |
|
|||| |||||||| ||||||||||||| |||||| ||||||| || ||| | |||||||| ||| ||||||| |
|
|
| T |
182819 |
ttatacataaatccacaatcaacaatcattcatatgcaaatcagcaactctgataaaataatatacttaatca |
182747 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 63; Significance: 2e-27; HSPs: 11)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 191
Target Start/End: Original strand, 17526470 - 17526656
Alignment:
| Q |
5 |
ctactactcaacaatgcatatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaacttttgacaatggaatccaacaacttgtatatt |
104 |
Q |
| |
|
||||||| || || ||||||| ||||||| ||||||| ||||||||||||||| || | |||||||| || ||||||||||| ||| |||||||||| | |
|
|
| T |
17526470 |
ctactacacagcagtgcatatataaatatgacttacacatcaacatggtcaactagcaatacaacaaccttcgacaatggaattcaagaacttgtataat |
17526569 |
T |
|
| Q |
105 |
ctatttaaatgcaattatgcataaatcagcaatcaacaatcaatcatattcaaatcaacagctcgggtaaaataacataattaatca |
191 |
Q |
| |
|
|||||| ||||| |||| ||||| || ||| || |||||| ||||| |||||||| || ||| | |||||||| ||||||||||| |
|
|
| T |
17526570 |
ttatttacatgcagttatacataattccacaaccagcaatcattcatactcaaatcagcaactctgataaaataatataattaatca |
17526656 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 6 - 191
Target Start/End: Complemental strand, 1590525 - 1590337
Alignment:
| Q |
6 |
tactactcaacaatgcatatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaacttttg--acaatggaatccaacaacttgtatat |
103 |
Q |
| |
|
|||||| ||||| ||||||||||||||| ||||||| ||||||| |||| || | |||||||||||||||| |||||| || ||||||||| |||| |
|
|
| T |
1590525 |
tactacacaacactgcatatttaaatatgacttacacttcaacattgtcatcttgtgacacaacaacttttgttacaatgacattcaacaacttttataa |
1590426 |
T |
|
| Q |
104 |
tctatttaaatgcaattatgcataaatcagcaatcaacaatcaatcatattcaaatcaacagctcgggta-aaataacataattaatca |
191 |
Q |
| |
|
| ||||||||| ||| || |||| | || ||||||| |||||| |||| ||||||||||| ||| |||| ||| |||||||||||||| |
|
|
| T |
1590425 |
tttatttaaatataatcatacatagaacaacaatcaataatcaaccataatcaaatcaacaactctggtagaaacaacataattaatca |
1590337 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 1584441 - 1584513
Alignment:
| Q |
5 |
ctactactcaacaatgcatatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaacttttg |
77 |
Q |
| |
|
||||||||||||| ||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||| |
|
|
| T |
1584441 |
ctactactcaacagtgcatatttaaatatgacttacacctcaacatggtcaacttgtgacacaacaacttttg |
1584513 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 1639282 - 1639354
Alignment:
| Q |
5 |
ctactactcaacaatgcatatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaacttttg |
77 |
Q |
| |
|
||||||| |||| ||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||| |
|
|
| T |
1639282 |
ctactacataacagtgcatatttaaatatgacttacacctcaacatggtcaacttgtgacacaacaacttttg |
1639354 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 41 - 200
Target Start/End: Complemental strand, 23621080 - 23620920
Alignment:
| Q |
41 |
acctcaacatggtcaactcgcgacacaacaacttttg-acaatggaatccaacaacttgtatattctatttaaatgcaattatgcataaatcagcaatca |
139 |
Q |
| |
|
|||||||||| ||||| | | |||||||||| |||| ||||||| || ||| |||||||||| | ||||||||| || ||| ||| || || |||||| |
|
|
| T |
23621080 |
acctcaacatcgtcaatttgtgacacaacaaactttgtacaatggtattcaaaaacttgtataatttatttaaatataaatatacatcaaacaacaatca |
23620981 |
T |
|
| Q |
140 |
acaatcaatcatattcaaatcaacagctcgggtaaaataacataattaatcataattattt |
200 |
Q |
| |
|
|||||||||||||||||| || |||||| || | |||| |||||||| ||||| |||||| |
|
|
| T |
23620980 |
acaatcaatcatattcaactctgcagctctgggacaatagcataattattcatagttattt |
23620920 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 200
Target Start/End: Complemental strand, 9185766 - 9185648
Alignment:
| Q |
80 |
aatggaatccaacaacttgtatattctatttaaatgcaattatgcataaatcagcaatcaacaatcaatcatattcaaatcaacagctcgggtaaaataa |
179 |
Q |
| |
|
|||| ||| |||||||||||||| | ||||||||| || ||| ||||| || ||||||||||| |||||| | || |||||||||| ||||||||| |
|
|
| T |
9185766 |
aatgaaattcaacaacttgtataatttatttaaatataaatatacataa--caacaatcaacaattcatcatacttaattcaacagctccggtaaaatag |
9185669 |
T |
|
| Q |
180 |
cataattaatcataattattt |
200 |
Q |
| |
|
|| |||||||||||| ||||| |
|
|
| T |
9185668 |
cacaattaatcataactattt |
9185648 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 62 - 151
Target Start/End: Original strand, 22346892 - 22346981
Alignment:
| Q |
62 |
gacacaacaacttttgacaatggaatccaacaacttgtatattctatttaaatgcaattatgcataaatcagcaatcaacaatcaatcat |
151 |
Q |
| |
|
||||||||||| || || |||| | |||||||||||||||| | | ||||| || |||||| ||||||||| ||||||||||||| |||| |
|
|
| T |
22346892 |
gacacaacaaccttcgataatgaattccaacaacttgtataatttgtttaagtgtaattatacataaatcaacaatcaacaatcagtcat |
22346981 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 62 - 142
Target Start/End: Complemental strand, 17027068 - 17026988
Alignment:
| Q |
62 |
gacacaacaacttttgacaatggaatccaacaacttgtatattctatttaaatgcaattatgcataaatcagcaatcaaca |
142 |
Q |
| |
|
||||||||||| || ||||||| | | |||||||||||||| | ||||||| || |||||| ||||||||| ||||||||| |
|
|
| T |
17027068 |
gacacaacaaccttcgacaatgaatttcaacaacttgtataatttatttaagtgtaattatacataaatcaacaatcaaca |
17026988 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 151
Target Start/End: Original strand, 1639352 - 1639407
Alignment:
| Q |
96 |
ttgtatattctatttaaatgcaattatgcataaatcagcaatcaacaatcaatcat |
151 |
Q |
| |
|
||||| ||| ||||||||| |||| || ||||||||| |||||||||||||||||| |
|
|
| T |
1639352 |
ttgtacattttatttaaatacaatcatacataaatcaacaatcaacaatcaatcat |
1639407 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 1584517 - 1584566
Alignment:
| Q |
102 |
attctatttaaatgcaattatgcataaatcagcaatcaacaatcaatcat |
151 |
Q |
| |
|
||||||||||||| |||| || ||||| ||| |||||||||||||||||| |
|
|
| T |
1584517 |
attctatttaaatacaatcatacataattcaacaatcaacaatcaatcat |
1584566 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 149
Target Start/End: Original strand, 14724683 - 14724747
Alignment:
| Q |
85 |
aatccaacaacttgtatattctatttaaatgcaattatgcataaatcagcaatcaacaatcaatc |
149 |
Q |
| |
|
|||||||||| ||| ||| | ||||||| || |||||| ||||||||| ||| |||||||||||| |
|
|
| T |
14724683 |
aatccaacaatttgcataatttatttaagtgtaattatacataaatcaacaaccaacaatcaatc |
14724747 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0556 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0556
Description:
Target: scaffold0556; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 36 - 200
Target Start/End: Original strand, 9848 - 10013
Alignment:
| Q |
36 |
cttacacctcaacatggtcaactcgcgacacaacaacttttg-acaatggaatccaacaacttgtatattctatttaaatgcaattatgcataaatcagc |
134 |
Q |
| |
|
||||||||||||||| ||||| | | ||||||||||| |||| ||||||| || || |||||||||| | ||||||||| || ||| ||| || || | |
|
|
| T |
9848 |
cttacacctcaacattgtcaatttgtgacacaacaacctttgtacaatggtatttaaaaacttgtataatttatttaaatataaatatacatcaaacaac |
9947 |
T |
|
| Q |
135 |
aatcaacaatcaatcatattcaaatcaacagctcgggtaaaataacataattaatcataattattt |
200 |
Q |
| |
|
||||||||||||||||||||||| || ||| || ||||||||| ||||||||||||||||||||| |
|
|
| T |
9948 |
aatcaacaatcaatcatattcaactctgcagttctggtaaaatagcataattaatcataattattt |
10013 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 56; Significance: 2e-23; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 13836639 - 13836738
Alignment:
| Q |
1 |
acaactactactcaacaatgcatatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaacttttgacaatggaatccaacaacttgta |
100 |
Q |
| |
|
||||||||||| ||||| ||||||||||||||| | |||| |||||||||||||||| | |||||||||||||||||||||| || |||||||||||| |
|
|
| T |
13836639 |
acaactactacccaacagtgcatatttaaatatgacgtacatctcaacatggtcaacttgtgacacaacaacttttgacaatgacattcaacaacttgta |
13836738 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 138 - 200
Target Start/End: Complemental strand, 30206347 - 30206285
Alignment:
| Q |
138 |
caacaatcaatcatattcaaatcaacagctcgggtaaaataacataattaatcataattattt |
200 |
Q |
| |
|
||||||||| |||||||||| |||||||||| || |||||| ||| |||||||||||| |||| |
|
|
| T |
30206347 |
caacaatcactcatattcaactcaacagctctggcaaaatagcattattaatcataatcattt |
30206285 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 10200 - 10253
Alignment:
| Q |
19 |
tgcatatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaac |
72 |
Q |
| |
|
|||||||||| || | ||||||||||||||||||||||| | ||||||||||| |
|
|
| T |
10200 |
tgcatatttagatgtgacttacacctcaacatggtcaacttgtgacacaacaac |
10253 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0014 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0014
Description:
Target: scaffold0014; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 5 - 211
Target Start/End: Original strand, 188913 - 189119
Alignment:
| Q |
5 |
ctactactcaacaatgcatatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaacttttgacaatggaatccaacaacttgtatatt |
104 |
Q |
| |
|
||||||| ||||| ||||||| ||||||| ||||||| |||||||| |||||| || | |||||||| || ||| ||| ||| ||||||||||||| | |
|
|
| T |
188913 |
ctactacacaacagtgcatatataaatatgacttacacatcaacatgatcaactagcaatacaacaaccttcgactatgaaatttaacaacttgtataat |
189012 |
T |
|
| Q |
105 |
ctatttaaatgcaattatgcataaatcagcaatcaacaatcaatcatattcaaatcaacagctcgggtaaaataacataattaatcataattatttattc |
204 |
Q |
| |
|
|| ||| |||||||||| |||||||| ||| || ||||| |||| |||||||| || ||| | |||||||| ||||||||||| |||||||| | |
|
|
| T |
189013 |
ttaattacatgcaattatacataaatccacaaccagtaatcattcatgctcaaatcagcaactctgataaaataatataattaatcaggattatttaata |
189112 |
T |
|
| Q |
205 |
tacccaa |
211 |
Q |
| |
|
||||||| |
|
|
| T |
189113 |
tacccaa |
189119 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0126 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0126
Description:
Target: scaffold0126; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 5933 - 5991
Alignment:
| Q |
1 |
acaactactactcaacaatgcatatttaaatatatcttacacctcaacatggtcaactc |
59 |
Q |
| |
|
||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
5933 |
acaactactactcaacagtgcatatttaaatatgtcttacacctcaacatggtcaactc |
5991 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0500 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0500
Description:
Target: scaffold0500; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 36 - 200
Target Start/End: Complemental strand, 11569 - 11404
Alignment:
| Q |
36 |
cttacacctcaacatggtcaactcgcgacacaacaacttttg-acaatggaatccaacaacttgtatattctatttaaatgcaattatgcataaatcagc |
134 |
Q |
| |
|
||||||||||||||| ||| | | | |||||||| || |||| ||||||| || ||| |||||||||| | ||||||||| || ||| ||| || | | |
|
|
| T |
11569 |
cttacacctcaacattgtctatttgtgacacaacgacctttgtacaatggtattcaaaaacttgtatactttatttaaatataaatatacatcaaataac |
11470 |
T |
|
| Q |
135 |
aatcaacaatcaatcatattcaaatcaacagctcgggtaaaataacataattaatcataattattt |
200 |
Q |
| |
|
||||||||||||||||||||||| || |||||| ||||||||| |||||||| ||||| |||||| |
|
|
| T |
11469 |
aatcaacaatcaatcatattcaactctgcagctctggtaaaatagcataattattcatagttattt |
11404 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0130 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0130
Description:
Target: scaffold0130; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 6 - 198
Target Start/End: Complemental strand, 2731 - 2539
Alignment:
| Q |
6 |
tactactcaacaatgcatatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaacttttg-acaatggaatccaacaacttgtatatt |
104 |
Q |
| |
|
|||||| ||||| |||||||||| || ||||||||||||||| ||||| | | ||||||||| |||| ||||||| || | | |||||||||| | |
|
|
| T |
2731 |
tactacgcaacagtgcatatttattcatgacttacacctcaacattgtcaatttttg-cacaacaacctttgtacaatggtattcgaaaacttgtataat |
2633 |
T |
|
| Q |
105 |
ctatttaaatgcaattatgcataaatcagcaatcaacaatcaatcatattcaaatcaacagctcgggtaaaataacataattaatcataattat |
198 |
Q |
| |
|
||||||| | || ||| |||||| || |||||||||||||||||||||||| || |||||| |||||||| ||||||||||||||||||| |
|
|
| T |
2632 |
ttatttaattataaatatacataaaacaacaatcaacaatcaatcatattcaacgcagcagctctggtaaaattgcataattaatcataattat |
2539 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0381 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0381
Description:
Target: scaffold0381; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 36 - 193
Target Start/End: Complemental strand, 13867 - 13709
Alignment:
| Q |
36 |
cttacacctcaacatggtcaactcgcgacacaacaacttttg-acaatggaatccaacaacttgtatattctatttaaatgcaattatgcataaatcagc |
134 |
Q |
| |
|
||||||||||||||| ||| | | | |||||||| || |||| ||||||| || ||| |||||||||| | ||||||||| || ||| ||| || | | |
|
|
| T |
13867 |
cttacacctcaacattgtctatttgtgacacaacgacctttgtacaatggtattcaaaaacttgtatactttatttaaatataaatatacatcaaataac |
13768 |
T |
|
| Q |
135 |
aatcaacaatcaatcatattcaaatcaacagctcgggtaaaataacataattaatcata |
193 |
Q |
| |
|
||||||||||||||||||||||| || |||||| ||||||||| |||||||| ||||| |
|
|
| T |
13767 |
aatcaacaatcaatcatattcaactctgcagctctggtaaaatagcataattattcata |
13709 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0069 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 2)
Name: scaffold0069
Description:
Target: scaffold0069; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 80 - 200
Target Start/End: Original strand, 29518 - 29636
Alignment:
| Q |
80 |
aatggaatccaacaacttgtatattctatttaaatgcaattatgcataaatcagcaatcaacaatcaatcatattcaaatcaacagctcgggtaaaataa |
179 |
Q |
| |
|
|||| ||| |||||||||||||| | ||||||||| || ||| ||||| |||||||||||||| |||||| | || |||||||||| |||| ||||| |
|
|
| T |
29518 |
aatgaaattcaacaacttgtataatttatttaaatataaatatacataa--cagcaatcaacaattcatcatacttaattcaacagctccggtagaataa |
29615 |
T |
|
| Q |
180 |
cataattaatcataattattt |
200 |
Q |
| |
|
|| ||||| |||||||||||| |
|
|
| T |
29616 |
cacaattattcataattattt |
29636 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0069; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 80 - 200
Target Start/End: Original strand, 34759 - 34877
Alignment:
| Q |
80 |
aatggaatccaacaacttgtatattctatttaaatgcaattatgcataaatcagcaatcaacaatcaatcatattcaaatcaacagctcgggtaaaataa |
179 |
Q |
| |
|
|||| ||| |||||||||||||| | ||||||||| || ||| ||||| ||| |||||||||| |||||| | || |||||||||| |||||||||| |
|
|
| T |
34759 |
aatgaaattcaacaacttgtataatttatttaaatataaatatacataa--cagaaatcaacaattcatcatacttaattcaacagctccggtaaaataa |
34856 |
T |
|
| Q |
180 |
cataattaatcataattattt |
200 |
Q |
| |
|
|| ||||| |||||||||||| |
|
|
| T |
34857 |
cacaattattcataattattt |
34877 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0011 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0011
Description:
Target: scaffold0011; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 80 - 200
Target Start/End: Complemental strand, 21601 - 21483
Alignment:
| Q |
80 |
aatggaatccaacaacttgtatattctatttaaatgcaattatgcataaatcagcaatcaacaatcaatcatattcaaatcaacagctcgggtaaaataa |
179 |
Q |
| |
|
|||| ||| |||||||||||||| | ||||||||| || ||| ||||| |||||||||||||| |||||| | || ||||||||| |||||||||| |
|
|
| T |
21601 |
aatgaaattcaacaacttgtataatttatttaaatataaatatacataa--cagcaatcaacaattcatcatacttaattcaacagcttcggtaaaataa |
21504 |
T |
|
| Q |
180 |
cataattaatcataattattt |
200 |
Q |
| |
|
|| |||||||||||| ||||| |
|
|
| T |
21503 |
cacaattaatcataactattt |
21483 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0420 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0420
Description:
Target: scaffold0420; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 66 - 144
Target Start/End: Complemental strand, 4636 - 4558
Alignment:
| Q |
66 |
caacaacttttgacaatggaatccaacaacttgtatattctatttaaatgcaattatgcataaatcagcaatcaacaat |
144 |
Q |
| |
|
||||||| || ||||||| |||||||||| ||||||| | ||||||| || |||||| ||||||||| ||||||||||| |
|
|
| T |
4636 |
caacaaccttcgacaatgaaatccaacaatttgtataatttatttaagtgtaattatacataaatcaacaatcaacaat |
4558 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0860 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0860
Description:
Target: scaffold0860; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 193
Target Start/End: Original strand, 565 - 618
Alignment:
| Q |
140 |
acaatcaatcatattcaaatcaacagctcgggtaaaataacataattaatcata |
193 |
Q |
| |
|
|||||||||||||||||| ||| |||||| ||||||||| |||||||||||||| |
|
|
| T |
565 |
acaatcaatcatattcaactcagcagctctggtaaaatagcataattaatcata |
618 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0635 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0635
Description:
Target: scaffold0635; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 7002 - 7137
Alignment:
| Q |
1 |
acaactactactcaacaatgcatatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaacttttgacaatggaatccaacaacttgta |
100 |
Q |
| |
|
|||||| |||| ||| ||||||||| | ||||| ||||| | ||||||||||||||| ||||||||||| || | ||||| | | |||||||||||| |
|
|
| T |
7002 |
acaactgctacacaataatgcatatatgaatatgacttactcatcaacatggtcaactat-gacacaacaaccttcggcaatgaatttcaacaacttgta |
7100 |
T |
|
| Q |
101 |
tattctatttaaatgcaattatgcataaatcagcaat |
137 |
Q |
| |
|
|| | | |||||||| |||||| ||||||||| |||| |
|
|
| T |
7101 |
taatttgtttaaatgtaattatacataaatcaacaat |
7137 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0322 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0322
Description:
Target: scaffold0322; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 62 - 142
Target Start/End: Original strand, 19575 - 19655
Alignment:
| Q |
62 |
gacacaacaacttttgacaatggaatccaacaacttgtatattctatttaaatgcaattatgcataaatcagcaatcaaca |
142 |
Q |
| |
|
||||||||||| || ||||||| | | |||||||||||||| | ||||||| || |||||| ||||||||| ||||||||| |
|
|
| T |
19575 |
gacacaacaaccttcgacaatgaatttcaacaacttgtataatttatttaagtgtaattatacataaatcaacaatcaaca |
19655 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0106 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0106
Description:
Target: scaffold0106; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 78 - 144
Target Start/End: Original strand, 36481 - 36547
Alignment:
| Q |
78 |
acaatggaatccaacaacttgtatattctatttaaatgcaattatgcataaatcagcaatcaacaat |
144 |
Q |
| |
|
|||||| |||||||||| ||||||| | ||||||| || |||||| ||||||||| ||||||||||| |
|
|
| T |
36481 |
acaatgaaatccaacaatttgtataatatatttaagtgtaattatacataaatcaacaatcaacaat |
36547 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0586 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0586
Description:
Target: scaffold0586; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 1735 - 1784
Alignment:
| Q |
1 |
acaactactactcaacaatgcatatttaaatatatcttacacctcaacat |
50 |
Q |
| |
|
||||||| ||| ||||| ||||||||||||||| |||||||||||||||| |
|
|
| T |
1735 |
acaactattacccaacagtgcatatttaaatatgtcttacacctcaacat |
1784 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0335 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0335
Description:
Target: scaffold0335; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 151
Target Start/End: Complemental strand, 8312 - 8223
Alignment:
| Q |
62 |
gacacaacaacttttgacaatggaatccaacaacttgtatattctatttaaatgcaattatgcataaatcagcaatcaacaatcaatcat |
151 |
Q |
| |
|
||||||||||| || |||||| | | |||||||||||||| | | ||||| || |||||| ||||||||| ||||||||||||| |||| |
|
|
| T |
8312 |
gacacaacaaccttcgacaataaatttcaacaacttgtataatttgtttaagtgtaattatacataaatcaacaatcaacaatcagtcat |
8223 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0089 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0089
Description:
Target: scaffold0089; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 139
Target Start/End: Original strand, 2223 - 2300
Alignment:
| Q |
62 |
gacacaacaacttttgacaatggaatccaacaacttgtatattctatttaaatgcaattatgcataaatcagcaatca |
139 |
Q |
| |
|
||||||||||| |||||||||| | |||||||||||||||| | | ||| | || |||||| ||||||||| |||||| |
|
|
| T |
2223 |
gacacaacaacctttgacaatgaattccaacaacttgtataatttgtttgagtgaaattatacataaatcaacaatca |
2300 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0609 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0609
Description:
Target: scaffold0609; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 193
Target Start/End: Original strand, 4771 - 4822
Alignment:
| Q |
142 |
aatcaatcatattcaaatcaacagctcgggtaaaataacataattaatcata |
193 |
Q |
| |
|
||||||||||||||| ||| |||||| ||||||||| |||||||||||||| |
|
|
| T |
4771 |
aatcaatcatattcatctcagcagctctggtaaaatagcataattaatcata |
4822 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0585 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0585
Description:
Target: scaffold0585; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 200
Target Start/End: Complemental strand, 8414 - 8306
Alignment:
| Q |
90 |
aacaacttgtatattctatttaaatgcaattatgcataaatcagcaatcaacaatcaatcatattcaaatcaacagctcgggtaaaataacataattaat |
189 |
Q |
| |
|
||||||||||||| | ||||||||| || ||| ||||| |||||||||||||| |||||| | || |||||||| | | || ||||||| ||||| | |
|
|
| T |
8414 |
aacaacttgtataatttatttaaatataaatatacataa--cagcaatcaacaattcatcatacttaattcaacagcgccgatagaataacaaaattatt |
8317 |
T |
|
| Q |
190 |
cataattattt |
200 |
Q |
| |
|
||||||||||| |
|
|
| T |
8316 |
cataattattt |
8306 |
T |
|
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Target: scaffold0575 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0575
Description:
Target: scaffold0575; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 8812 - 8949
Alignment:
| Q |
1 |
acaactactactcaacaatgcatatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaacttttgacaatggaatccaacaacttgta |
100 |
Q |
| |
|
|||||| |||| ||| ||||||||| | ||||| ||||| | ||||||||||||||| ||||||||||| || ||||||| | | |||||||||||| |
|
|
| T |
8812 |
acaactgctacacaataatgcatatatgaatatgacttactcatcaacatggtcaact-atgacacaacaaccttcgacaatgaatttcaacaacttgta |
8910 |
T |
|
| Q |
101 |
tattctatttaaatgcaattatgcataaatcagcaatca |
139 |
Q |
| |
|
|| | | ||||| || |||||| || ||||| |||||| |
|
|
| T |
8911 |
taatttgtttaagtgtaattatacaacaatcaacaatca |
8949 |
T |
|
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Target: scaffold0395 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0395
Description:
Target: scaffold0395; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 151
Target Start/End: Complemental strand, 2089 - 1999
Alignment:
| Q |
62 |
gacacaacaacttttgacaatggaatc-caacaacttgtatattctatttaaatgcaattatgcataaatcagcaatcaacaatcaatcat |
151 |
Q |
| |
|
||||||||||| || |||||| ||||| | |||||||||||| | ||||||| || |||||| ||| ||||| ||||||||| ||| |||| |
|
|
| T |
2089 |
gacacaacaaccttcgacaattgaatctccacaacttgtataatttatttaagtgtaattatacatcaatcaacaatcaacattcattcat |
1999 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0057 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0057
Description:
Target: scaffold0057; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 144
Target Start/End: Complemental strand, 1873 - 1792
Alignment:
| Q |
62 |
gacacaacaacttttgacaatggaatccaacaacttgtatattctatttaaatgcaattatgcataaatcagcaatcaacaat |
144 |
Q |
| |
|
||||||||||| || || |||| |||||||||| ||||||| | ||||||| || ||||| ||||||||| ||||||||||| |
|
|
| T |
1873 |
gacacaacaaccttcgataatgaaatccaacaatttgtataatttatttaagtg-tattatacataaatcaacaatcaacaat |
1792 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0672 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0672
Description:
Target: scaffold0672; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 139
Target Start/End: Complemental strand, 8335 - 8258
Alignment:
| Q |
62 |
gacacaacaacttttgacaatggaatccaacaacttgtatattctatttaaatgcaattatgcataaatcagcaatca |
139 |
Q |
| |
|
||||||||||| || ||||||| | |||||||||||||||| | | ||| | || |||||| ||||||||| |||||| |
|
|
| T |
8335 |
gacacaacaaccttcgacaatgaattccaacaacttgtataatttgtttgagtgaaattatacataaatcaacaatca |
8258 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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