View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8541_low_1 (Length: 688)
Name: NF8541_low_1
Description: NF8541
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8541_low_1 |
 | |
|
| [»] scaffold0288 (1 HSPs) |
| | |
|
| [»] scaffold0475 (1 HSPs) |
| | |
|
| [»] scaffold0199 (1 HSPs) |
| | |
|
| [»] scaffold0477 (1 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 444; Significance: 0; HSPs: 33)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 444; E-Value: 0
Query Start/End: Original strand, 17 - 588
Target Start/End: Complemental strand, 4581573 - 4581002
Alignment:
| Q |
17 |
aaaagccacatgcagtgttaacaccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggcttttacataac |
116 |
Q |
| |
|
||||||||||||||||||| | |||| |||| ||||||| ||||||| | |||| | | ||||| ||| || |||||||||||||||||| ||||||| |
|
|
| T |
4581573 |
aaaagccacatgcagtgttgattccatatccacttcaaggacatatcactccattaataacactagcaaagcttcttcaccttagaggctttcacataac |
4581474 |
T |
|
| Q |
117 |
ctttgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaaagcctttgatggtttcaccgattttacctttgagactattccagat |
216 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4581473 |
ctttgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaaagcgtttgatggtttcaccgattttacctttgagactattccagat |
4581374 |
T |
|
| Q |
217 |
ggtttaactccgatagaaggcgatggtgatgttagtcaagacatatatgctctctgtgaatcagtcagaaaaaacttcctacaacctttccgagaacttc |
316 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| |||||||||||||||||| ||||||||| ||||||| ||||||||||||||||| | ||||||| |
|
|
| T |
4581373 |
ggtttaactccgatagaaggcgatagtgatgttaatcaagacatatatgctctatgtgaatcaatcagaaagaacttcctacaacctttttgtgaacttc |
4581274 |
T |
|
| Q |
317 |
ttgctagacttaatgactctgccacttctggtcttgtccctccagttacttgcatagtttctgatattagcatgtattttacaatacaagctgctgaaga |
416 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
4581273 |
ttgctagacttaatgactctgccacttctggtcttgtccctccagttacttgcatagtttctgataatagcatgtattttacaatacaagctgctgaaga |
4581174 |
T |
|
| Q |
417 |
actttcaatccctgttgttttctttagttcagccagtgcatgtatgcttttgactggttttcacttacctacactgtttgacaaaggtgtcataccacta |
516 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4581173 |
actttcaatccctgttgttttctttagtccagccagtgcatgtatgtttttgacttgttttcacttacctacactgtttgacaaaggtgtcataccacta |
4581074 |
T |
|
| Q |
517 |
aaaggtaacaatcaattaatcttctttctttcttcatacctgtattgtagttaaagtattaatatgacattt |
588 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| |
|
|
| T |
4581073 |
aaaggtaacaatcaattaatcttctttctttcttcatagatgtagtgtagttaaagtattaatatgacattt |
4581002 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 344; E-Value: 0
Query Start/End: Original strand, 22 - 673
Target Start/End: Original strand, 4612292 - 4612950
Alignment:
| Q |
22 |
ccacatgcagtgttaacaccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggcttttacataacctttg |
121 |
Q |
| |
|
|||||||||||||||| |||| |||||||||||||||||||||| |||| | ||||||| |||||| |||||||||||||||||| ||||||| || | |
|
|
| T |
4612292 |
ccacatgcagtgttaattccatatccagttcaaggccatatcaatccattaatcaaactagcaaaacttcttcaccttagaggctttcacataacattcg |
4612391 |
T |
|
| Q |
122 |
tcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaaagcctttgatggtttcaccgattttacctttgagactattccagatggttt |
221 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||| |||| ||||||||| | |
|
|
| T |
4612392 |
tcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgcctttgttggtttcactgattttacctttgaggctataccagatggtct |
4612491 |
T |
|
| Q |
222 |
aactccgatagaaggcgatg------gtgatgttagtcaagacatatatgctctctgtgaatcagtcagaaaaaacttcctacaacctttccgagaactt |
315 |
Q |
| |
|
| || | | |||||||||| |||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||||||||||| || |||||| |
|
|
| T |
4612492 |
accttcaaacgaaggcgatggtgatggtgatgttagtcaagacatatatgctctttgtgaatcaatcagaaagaacttcctacaaccttttcgcgaactt |
4612591 |
T |
|
| Q |
316 |
cttgctagacttaatgactctgccacttctggtcttgtccctccagttacttgcatagtttctgatattagcatgtattttacaatacaagctgctgaag |
415 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||||||||||| ||||| |||||| || |||||| |||||||| |||||| |||||||||| ||||| |
|
|
| T |
4612592 |
atttctagacttaatgactctgccacttctggtcttgtccctccggttacgtgcataattgctgataatagcatgtcttttaccatacaagctggtgaag |
4612691 |
T |
|
| Q |
416 |
aactttcaatccctgttgttttctttagttcagccagtgcatgtatgcttttgactggttttcacttacctacactgtttgacaaaggtgtcataccact |
515 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||| |||||||| ||| ||||||||||||||||| |||| ||||||| ||||||||||||||||| |
|
|
| T |
4612692 |
aactttcaatccctgttgttttctttagtccagccaatgcatgtacattttggactggttttcacttacttacattgtttgataaaggtgtcataccact |
4612791 |
T |
|
| Q |
516 |
aaaaggtaacaatcaattaatcttctttctttcttcatacctgtattgtagttaaagtattaatatgacatttgttacaagtatggagattccatatcaa |
615 |
Q |
| |
|
|||||||||| |||| ||||||||||||||||||||||| |||| |||||||||||| || ||||||||| | ||| | | |||||||| || |||| |
|
|
| T |
4612792 |
aaaaggtaacgatcatttaatcttctttctttcttcataggtgtagtgtagttaaagtgttcatatgacatgtattaggaatctggagattttatttcaa |
4612891 |
T |
|
| Q |
616 |
gttaacagattttgt-aatttgatgtacagatgacagttatctcacaaacggatatttg |
673 |
Q |
| |
|
| ||||| |||||| ||||||| | ||||||| |||||||| ||||||||||||||| |
|
|
| T |
4612892 |
gctaacaacttttgtaaatttgacatgcagatgagagttatctgacaaacggatatttg |
4612950 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 290; E-Value: 1e-162
Query Start/End: Original strand, 17 - 678
Target Start/End: Complemental strand, 4572525 - 4571867
Alignment:
| Q |
17 |
aaaagccacatgcagtgttaacaccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggcttttacataac |
116 |
Q |
| |
|
|||| |||||||| ||||||| |||| |||||||||||||||||||||| |||||||| |||||| |||| | |||||||||||||| ||| ||||||| |
|
|
| T |
4572525 |
aaaaaccacatgctgtgttaatcccatatccagttcaaggccatatcaatccattgttgcaactagcaaaatttcttcaccttagaggttttcacataac |
4572426 |
T |
|
| Q |
117 |
ctttgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaaagcctttgatggtttcaccgattttacctttgagactattccagat |
216 |
Q |
| |
|
|| ||| ||||| ||||||||||||||||| |||||||| |||||||||| ||| |||||||||||||||||| |||||| |||||||| |||||||||| |
|
|
| T |
4572425 |
ctatgtaaacactgaatacaatcacaaacggttgctcaagtcaagaggtcaaaatgcctttgatggtttcaccaattttaactttgagagtattccagat |
4572326 |
T |
|
| Q |
217 |
ggtttaactccgatagaaggcgatggtgatgttagtcaagacatatatgctctctgtgaatcagtcagaaaaaacttcctacaacctttccgagaacttc |
316 |
Q |
| |
|
|||||| |||| | || |||||||| ||||||||||||||||| || ||||| ||| ||||| |||| || || || |||||||||||||| ||||||| |
|
|
| T |
4572325 |
ggtttatctccaacggatggcgatggcgatgttagtcaagacatttacgctctttgtaaatcaatcaggaagaattttctacaacctttccgcgaacttc |
4572226 |
T |
|
| Q |
317 |
ttgctagacttaatgactctgccacttctggtcttgtccctccagttacttgcatagtttctgatattagcatgtattttacaatacaagctgctgaaga |
416 |
Q |
| |
|
|||||||||||||||||||||| || ||||||||||||| |||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||| |
|
|
| T |
4572225 |
ttgctagacttaatgactctgcaacatctggtcttgtccgtccagttagttgcatagtttctgatattagcatgtcctttactatacaagctgctgaaga |
4572126 |
T |
|
| Q |
417 |
actttcaatccctgttgttttctttagttcagccagtgcatgtatgcttttgactggttttcacttacctacactgtttgacaaaggtgtcataccacta |
516 |
Q |
| |
|
||||||||||||| |||| |||||||| || ||| |||||||| || |||||||| |||| |||| |||| | | || |||||| ||||||||||| |
|
|
| T |
4572125 |
actttcaatccctaatgttgtctttagtccatccaatgcatgtacatttctgactggtattcatttacgtacatttctagataaaggtctcataccacta |
4572026 |
T |
|
| Q |
517 |
aaaggtaacaatcaattaatcttctttctttcttcatacctgtattgtagttaaagtattaatatgacatttgttacaagtatggagattccatatcaag |
616 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||| |||| ||||||||||| || ||||||||| | || ||||||||||||| || ||| |
|
|
| T |
4572025 |
aaaggtaa----caattaatcttctttctttcttcatatgtgtagagtagttaaagtgttcatatgacatatatttggagtatggagattcaatttcaca |
4571930 |
T |
|
| Q |
617 |
ttaacagattttgt-aatttgatgtacagatgacagttatctcacaaacggatatttgaacac |
678 |
Q |
| |
|
||||| |||||| |||||||| | ||||||| |||||||| ||||||||||||||| |||| |
|
|
| T |
4571929 |
ctaacaacttttgtaaatttgatatgcagatgagagttatctgacaaacggatatttggacac |
4571867 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 17 - 554
Target Start/End: Complemental strand, 4558684 - 4558151
Alignment:
| Q |
17 |
aaaagccacatgcagtgttaacaccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggcttttacataac |
116 |
Q |
| |
|
|||| |||||||| ||||||| |||| |||||||||||||||||||||| ||||||||||||||| |||||| |||||||||||||| ||| ||||||| |
|
|
| T |
4558684 |
aaaaaccacatgctgtgttaattccatatccagttcaaggccatatcaatccattgttgaaactagcaaaacttcttcaccttagaggatttcacataac |
4558585 |
T |
|
| Q |
117 |
ctttgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaaagcctttgatggtttcaccgattttacctttgagactattccagat |
216 |
Q |
| |
|
|| ||| ||||| |||||||| |||||||| |||||||| |||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||| ||| |
|
|
| T |
4558584 |
ctatgtaaacactgaatacaaccacaaacggttgctcaagtcaagaggtccaaatgcctttgatggtttcactgattttagctttgagactattccggat |
4558485 |
T |
|
| Q |
217 |
ggtttaactccgatagaaggcgatggtgatgttagtcaagacatatatgctctctgtgaatcagtcagaaaaaacttcctacaacctttccgagaacttc |
316 |
Q |
| |
|
||||||||||| | || || ||||| ||||||||||||||||| || ||||| ||| ||||| ||||||| |||||||||||||||||||| ||||||| |
|
|
| T |
4558484 |
ggtttaactccaacggatggtgatggcgatgttagtcaagacatttacgctctttgtaaatcaatcagaaagaacttcctacaacctttccgcgaacttc |
4558385 |
T |
|
| Q |
317 |
ttgctagacttaatgactctgccacttctggtcttgtccctccagttacttgcatagtttctgatattagcatgtattttacaatacaagctgctgaaga |
416 |
Q |
| |
|
|||||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||||| |||||| |||||| ||||||||| ||||||| |
|
|
| T |
4558384 |
ttgctagactaaatgactctgcaacatctggtcttgtccctccagttacttgcatagtttctgatattggcatgtcttttaccatacaagcttctgaaga |
4558285 |
T |
|
| Q |
417 |
actttcaatccctgttgttttctttagttcagccagtgcatgtatgcttttgactggttttcacttacctacactgtttgacaaaggtgtcataccacta |
516 |
Q |
| |
|
||||||||||||| ||||||||||||| || ||| |||||||| |||||||| | |||| || |||| |||| || |||||| ||||||||||| |
|
|
| T |
4558284 |
actttcaatcccttctgttttctttagtccatccaatgcatgtacatttttgacttttattcattttagtacattgttggataaaggtctcataccacta |
4558185 |
T |
|
| Q |
517 |
aaaggtaacaatcaattaatcttctttctttcttcata |
554 |
Q |
| |
|
|||||||| |||||||||||||| ||||||||||| |
|
|
| T |
4558184 |
aaaggtaa----caattaatcttcttgctttcttcata |
4558151 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 277; E-Value: 1e-154
Query Start/End: Original strand, 25 - 678
Target Start/End: Complemental strand, 4587183 - 4586531
Alignment:
| Q |
25 |
catgcagtgttaacaccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggcttttacataacctttgtca |
124 |
Q |
| |
|
||||| ||||||| |||| |||||||||||||||||||||| ||||||||||||||| ||||| ||||||||| |||| ||| ||||||||||||| | |
|
|
| T |
4587183 |
catgctgtgttaatcccatctccagttcaaggccatatcaatccattgttgaaactagctaaacttcttcaccttcgaggatttcacataacctttgtaa |
4587084 |
T |
|
| Q |
125 |
acaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaaagcctttgatggtttcaccgattttacctttgagactattccagatggtttaac |
224 |
Q |
| |
|
|||| ||||||||||||||||| ||||| || ||||||| |||||| |||||||||| ||| || ||||||| ||||||||||||||||||||||||||| |
|
|
| T |
4587083 |
acactgaatacaatcacaaacggttgcttaagtcaagagctccaaatgcctttgatgatttaactgattttagctttgagactattccagatggtttaac |
4586984 |
T |
|
| Q |
225 |
tccgatagaaggcgatggtgatgttagtcaagacatatatgctctctgtgaatcagtcagaaaaaacttcctacaacctttccgagaacttcttgctaga |
324 |
Q |
| |
|
||| | || || ||||||||||||||||||||||| || ||||| ||| ||||| ||||||| |||||||||||||||||||| ||||||||||||||| |
|
|
| T |
4586983 |
tccaacggatggtgatggtgatgttagtcaagacatttacgctctttgtaaatcaatcagaaagaacttcctacaacctttccgcgaacttcttgctaga |
4586884 |
T |
|
| Q |
325 |
cttaatgactctgccacttctggtcttgtccctccagttacttgcatagtttctgatattagcatgtattttacaatacaagctgctgaagaactttcaa |
424 |
Q |
| |
|
|||||||||||||| || ||||||||| |||||||||| ||||| |||||||||||||||| ||||| ||||| |||||||||||||||||||||||| |
|
|
| T |
4586883 |
cttaatgactctgcaacatctggtcttatccctccagtcacttgtatagtttctgatattaccatgtcctttactatacaagctgctgaagaactttcac |
4586784 |
T |
|
| Q |
425 |
tccctgttgttttctttagttcagccagtgcatgtatgcttttgactggttttcacttacctacactgtttgacaaaggtgtcataccactaaaaggtaa |
524 |
Q |
| |
|
|||| |||||||||||| | ||||||||||||||||| |||||||| || |||| || |||| |||| || |||||| ||||||||||||| ||||| |
|
|
| T |
4586783 |
tcccacttgttttctttaatccagccagtgcatgtatgtttttgacttgtattcattttagtacattgttggataaaggtctcataccactaaagggtaa |
4586684 |
T |
|
| Q |
525 |
caatcaattaatcttctttctttcttcatacctgtattgtagttaaagtattaatatgacatttgttacaagtatggagattccatatcaagttaacaga |
624 |
Q |
| |
|
|||||||||||||||||||||||||| |||| |||||| || || ||||||||| | || |||||| |||||| || ||||| ||||| |
|
|
| T |
4586683 |
----caattaatcttctttctttcttcatatatgtagaatagttagcgtgttcatatgacatatatttggagtatgaagattcaatttcaagctaacaac |
4586588 |
T |
|
| Q |
625 |
ttttgt-aatttgatgta--cagatgacagttatctcacaaacggatatttgaacac |
678 |
Q |
| |
|
|||| | |||||||| || ||||| | |||||||| ||||||||||||||| |||| |
|
|
| T |
4586587 |
ttttataaatttgatatatgcagataagagttatctgacaaacggatatttggacac |
4586531 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 19 - 526
Target Start/End: Complemental strand, 4517897 - 4517390
Alignment:
| Q |
19 |
aagccacatgcagtgttaacaccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggcttttacataacct |
118 |
Q |
| |
|
||||||||||||||| |||| |||| |||| ||||||||||||||||| | ||||| ||||||| |||||| ||||| |||||||||||| ||||||||| |
|
|
| T |
4517897 |
aagccacatgcagtgataactccatatccacttcaaggccatatcaatccgttgttaaaactagcaaaacttcttcatcttagaggctttcacataacct |
4517798 |
T |
|
| Q |
119 |
ttgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaaagcctttgatggtttcaccgattttacctttgagactattccagatgg |
218 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
4517797 |
ttgtcaacaccgaatacaatcacaaacgtttgctcaaatcaagaggtccaaaagcctttgatggtttcactgattttacctttgagactattccagatgg |
4517698 |
T |
|
| Q |
219 |
tttaactccgatagaaggcgatggtgatgttagtcaagacatatatgctctctgt--gaatcagtcagaaaaaacttcctacaacctttccgagaacttc |
316 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||| |||||| | || ||| | ||||| || ||| || || ||| | ||||||| |
|
|
| T |
4517697 |
tttaactccgatagaaggcgatggtgatgttagtcaagacat-tat-ctctctttccgattcaataagaaagaatttctatcaccccttctgtgaacttc |
4517600 |
T |
|
| Q |
317 |
ttgctagacttaatgactctgccacttctggtcttgtccctccagttacttgcatagtttctgatattagcatgtattttacaatacaagctgctgaaga |
416 |
Q |
| |
|
||||||||||||| || ||| ||| | ||||| | | ||||| |||| |||| |||||||||||||| | || |||||| ||||||||||||||||| |
|
|
| T |
4517599 |
ttgctagacttaaagattcttccaatgatggtcatattcctcctgttagttgcttagtttctgatattggattgacttttactatacaagctgctgaaga |
4517500 |
T |
|
| Q |
417 |
actttcaatccctgttgttttctttagttcagccagtgcatgtatgcttttgactggttttcacttacctacactgtttgacaaaggtgtcataccacta |
516 |
Q |
| |
|
|| | | ||| |||| | ||||||||||| ||||||||| ||| || | | ||| ||||| | |||| || |||| ||||||||||||||||| |
|
|
| T |
4517499 |
acatggtttacctagtgttctatttagttcagctagtgcatgttcacttctgtcggctttgcactttcgtacattgattgataaaggtgtcataccactc |
4517400 |
T |
|
| Q |
517 |
aaaggtaaca |
526 |
Q |
| |
|
|||||||||| |
|
|
| T |
4517399 |
aaaggtaaca |
4517390 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 18 - 381
Target Start/End: Original strand, 4488767 - 4489130
Alignment:
| Q |
18 |
aaagccacatgcagtgttaacaccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggcttttacataacc |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |
|
|
| T |
4488767 |
aaagccacatgcagtgttaacaccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggatttcacataacc |
4488866 |
T |
|
| Q |
118 |
tttgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaaagcctttgatggtttcaccgattttacctttgagactattccagatg |
217 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||||| |||||||||||||||||||| |
|
|
| T |
4488867 |
tttgtcaacactgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgcctttgatggtttaactgattttagctttgagactattccagatg |
4488966 |
T |
|
| Q |
218 |
gtttaactccgatagaaggcgatggtgatgttagtcaagacatatatgctctctgtgaatcagtcagaaaaaacttcctacaacctttccgagaacttct |
317 |
Q |
| |
|
|||||||||| | ||| || ||||| |||||||||||||| || ||||| ||| |||| ||| || || || | ||| || | | | |||| |
|
|
| T |
4488967 |
gtttaactccaacagatggtgatggcgatgttagtcaagatttacgcgctctttgtctatcaatcatgaacaattttcaccaattctttggtgtatttct |
4489066 |
T |
|
| Q |
318 |
tgctagacttaatgactctgccacttctggtcttgtccctccagttacttgcatagtttctgat |
381 |
Q |
| |
|
||||| ||||||||||||||| ||| |||||||| ||||||||||||||||| ||||||||||| |
|
|
| T |
4489067 |
tgctaaacttaatgactctgctactgctggtcttatccctccagttacttgcttagtttctgat |
4489130 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 170; E-Value: 7e-91
Query Start/End: Original strand, 91 - 524
Target Start/End: Complemental strand, 4599648 - 4599216
Alignment:
| Q |
91 |
cttcaccttagaggcttttacataacctttgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaaagcctttgatggtttcaccg |
190 |
Q |
| |
|
|||||||||||||| |||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||| || | | |||||||||| | |
|
|
| T |
4599648 |
cttcaccttagaggattttacataaccttcgtgaacaccgagtacaatcacaaacgcttgctcaaatcaagaggtcctaattctcgtaatggtttcactg |
4599549 |
T |
|
| Q |
191 |
attttacctttgagactattccagatggtttaactccgatagaaggcgatggtgatgttagtcaagacatatatgctctctgtgaatcagtcagaaaaaa |
290 |
Q |
| |
|
||||| |||| |||||||||||||||||||||||||| ||||| || ||||||||||||| || |||||| || |||||||| ||||| ||||||| || |
|
|
| T |
4599548 |
atttttccttcgagactattccagatggtttaactccaatagatggtgatggtgatgttacacaggacataaattctctctgtaaatcaatcagaaataa |
4599449 |
T |
|
| Q |
291 |
cttcctacaacctttccgagaacttcttgctagacttaatgactctgccacttctggtcttgtccctccagttacttgcatagtttctgatattagcatg |
390 |
Q |
| |
|
|||||| ||||| || || ||||||||||||||||| |||| ||| | ||| |||||||| ||||||||||||||||| ||| || |||| | |||| |
|
|
| T |
4599448 |
cttcctccaaccatttcgcgaacttcttgctagactctatgagtcttctactgctggtcttatccctccagttacttgcttag-ttatgattggaacatg |
4599350 |
T |
|
| Q |
391 |
tattttacaatacaagctgctgaagaactttcaatccctgttgttttctttagttcagccagtgcatgtatgcttttgactggttttcacttacctacac |
490 |
Q |
| |
|
| ||||| ||||||| |||||||||||||||| | ||| ||||| |||||||| || ||| |||||||| | |||||| |||| |||||||| ||| |
|
|
| T |
4599349 |
tcctttactatacaagttgctgaagaactttcacttcctattgttctctttagtccatccaatgcatgtacattcttgacttgtttacacttaccgacat |
4599250 |
T |
|
| Q |
491 |
tgtttgacaaaggtgtcataccactaaaaggtaa |
524 |
Q |
| |
|
||||||| ||| || ||||||||||||||||||| |
|
|
| T |
4599249 |
tgtttgaaaaatgtctcataccactaaaaggtaa |
4599216 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 17 - 258
Target Start/End: Complemental strand, 4482424 - 4482183
Alignment:
| Q |
17 |
aaaagccacatgcagtgttaacaccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggcttttacataac |
116 |
Q |
| |
|
|||| |||||||||||||| || |||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
4482424 |
aaaaaccacatgcagtgttgactccatttccagctcaaggccatatcaatgcattgttgaaaataggaaaactacttcaccttagaggctttcacataac |
4482325 |
T |
|
| Q |
117 |
ctttgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaaagcctttgatggtttcaccgattttacctttgagactattccagat |
216 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||| |||||||||||||| || || |||||| |
|
|
| T |
4482324 |
ctttgtcaacaccgaatacaatcacaaacgtttgctaaaatcaaggggtccaaaagcctttgatggtttcactgattttacctttgaaacgataccagat |
4482225 |
T |
|
| Q |
217 |
ggtttaactccgatagaaggcgatggtgatgttagtcaagac |
258 |
Q |
| |
|
||||||||||| || ||||| |||| ||| || ||||||||| |
|
|
| T |
4482224 |
ggtttaactccaattgaaggtgatgatgaagtaagtcaagac |
4482183 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 164; E-Value: 3e-87
Query Start/End: Original strand, 17 - 528
Target Start/End: Complemental strand, 4623866 - 4623355
Alignment:
| Q |
17 |
aaaagccacatgcagtgttaacaccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggcttttacataac |
116 |
Q |
| |
|
||||||||||||| ||||| | ||| |||||||||||| ||||||||| ||||||| ||||||| ||| || ||| |||||| ||||||| ||||||| |
|
|
| T |
4623866 |
aaaagccacatgctgtgttgattgcatatccagttcaaggtcatatcaatccattgttcaaactagcaaagcttctttaccttaaaggctttcacataac |
4623767 |
T |
|
| Q |
117 |
ctttgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaaagcctttgatggtttcaccgattttacctttgagactattccagat |
216 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||| ||||||||| ||||||||| |
|
|
| T |
4623766 |
ctttggtcacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaaggcctttgatggtttcacggactttaactttgagaccattccagat |
4623667 |
T |
|
| Q |
217 |
ggtttaactccgatagaaggcgatggtgatgttagtcaagacatatatgctctctgtgaatcagtcagaaaaaacttcctacaacctttccgagaacttc |
316 |
Q |
| |
|
|||||||| || || ||||| |||||||||||||||||||||||| |||| | ||| ||| | || || || ||| || || || | ||||||| |
|
|
| T |
4623666 |
ggtttaacaccaatggaaggtgatggtgatgttagtcaagacataccctctctttctgattcaataaggaagaatttctatcatcccttttgtgaacttc |
4623567 |
T |
|
| Q |
317 |
ttgctagacttaatgactctgccacttctggtcttgtccctccagttacttgcatagtttctgatattagcatgtattttacaatacaagctgctgaaga |
416 |
Q |
| |
|
|||| | |||| |||||||||||||| |||||||||| || |||||||||||| ||||||| ||| | ||||| ||||||||||||||||||||||| |
|
|
| T |
4623566 |
ttgcaaaacttcatgactctgccactgctggtcttgttccaccagttacttgcttagtttccgattgttacatgtcatttacaatacaagctgctgaaga |
4623467 |
T |
|
| Q |
417 |
actttcaatccctgttgttttctttagttcagccagtgcatgtatgcttttgactggttttcacttacctacactgtttgacaaaggtgtcataccacta |
516 |
Q |
| |
|
| | || |||| |||||||||| |||| |||||| ||| | ||| ||| ||| ||||| | |||||||||||| |||||| | |||||||| |
|
|
| T |
4623466 |
gcatgcactcccaattgttttcttctccccagctagtgcaagtaccttcttgtctgttttacactttcatacactgtttgagaaaggtctaataccactc |
4623367 |
T |
|
| Q |
517 |
aaaggtaacaat |
528 |
Q |
| |
|
|||||||||||| |
|
|
| T |
4623366 |
aaaggtaacaat |
4623355 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 162; E-Value: 4e-86
Query Start/End: Original strand, 17 - 381
Target Start/End: Complemental strand, 4576014 - 4575650
Alignment:
| Q |
17 |
aaaagccacatgcagtgttaacaccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggcttttacataac |
116 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| |||||| |||||||||||||||||| ||||||| |
|
|
| T |
4576014 |
aaaagccacatgcagtgttaactccatttccagttcaaggccatatcaatgcattgttgaaaatagcaaaactgcttcaccttagaggctttcacataac |
4575915 |
T |
|
| Q |
117 |
ctttgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaaagcctttgatggtttcaccgattttacctttgagactattccagat |
216 |
Q |
| |
|
|||||| ||||| ||||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||| || |||| |||||||||||| |||||| |
|
|
| T |
4575914 |
ctttgttaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcactgactttaactttgagactataccagat |
4575815 |
T |
|
| Q |
217 |
ggtttaactccgatagaaggcgatggtgatgttagtcaagacatatatgctctctgtgaatcagtcagaaaaaacttcctacaacctttccga-gaactt |
315 |
Q |
| |
|
||||||||||| | || || |||||||||| ||||||||| || | |||| |||||||| ||| || ||||| | | || | | || |||||| |
|
|
| T |
4575814 |
ggtttaactccaaaggatggtaatggtgatgtaagtcaagacctacactctcttggtgaatcaatcataacgaactttc-gccacttctttgatgaactt |
4575716 |
T |
|
| Q |
316 |
cttgctagacttaatgactctgccacttctggtcttgtccctccagttacttgcatagtttctgat |
381 |
Q |
| |
|
||||||| |||| | |||||||||||| |||||||| |||| ||||| |||||| ||||||||||| |
|
|
| T |
4575715 |
cttgctaaacttcaagactctgccactgctggtcttatccccccagtcacttgcttagtttctgat |
4575650 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 161; E-Value: 2e-85
Query Start/End: Original strand, 22 - 258
Target Start/End: Complemental strand, 3173557 - 3173321
Alignment:
| Q |
22 |
ccacatgcagtgttaacaccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggcttttacataacctttg |
121 |
Q |
| |
|
||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||| |
|
|
| T |
3173557 |
ccacatgcagtgttaactccatatccagttcaaggccatatcaatgcattgttgaaactagcaaaactacttcactttagaggctttcacataacctttg |
3173458 |
T |
|
| Q |
122 |
tcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaaagcctttgatggtttcaccgattttacctttgagactattccagatggttt |
221 |
Q |
| |
|
| ||||| ||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||| ||||||| |||||||||||| ||||||||||| |
|
|
| T |
3173457 |
taaacactgaatacaatcacaaacggttgctcaaatcaaagggtccaaatgcctttgatggtttcaatgattttaactttgagactataccagatggttt |
3173358 |
T |
|
| Q |
222 |
aactccgatagaaggcgatggtgatgttagtcaagac |
258 |
Q |
| |
|
|||| | || ||||| ||||||||||||||||||||| |
|
|
| T |
3173357 |
aacttcaatggaaggtgatggtgatgttagtcaagac |
3173321 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 160; E-Value: 6e-85
Query Start/End: Original strand, 19 - 418
Target Start/End: Complemental strand, 4627707 - 4627308
Alignment:
| Q |
19 |
aagccacatgcagtgttaacaccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggcttttacataacct |
118 |
Q |
| |
|
||||||||||| ||||| | ||||||||| ||||||||||||||||| ||||||||| ||||| |||| |||||||||||||||||||| ||||||||| |
|
|
| T |
4627707 |
aagccacatgctgtgttgattccatttccacttcaaggccatatcaatccattgttgatactagcaaaattacttcaccttagaggctttcacataacct |
4627608 |
T |
|
| Q |
119 |
ttgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaaagcctttgatggtttcaccgattttacctttgagactattccagatgg |
218 |
Q |
| |
|
|||||||||| ||||||||||||||||| |||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||| || |||||||| |
|
|
| T |
4627607 |
ttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagatgg |
4627508 |
T |
|
| Q |
219 |
tttaactccgatagaaggcgatggtgatgttagtcaagacatatatgctctctgtgaatcagtcagaaaaaacttcctacaacctttccgagaacttctt |
318 |
Q |
| |
|
|||||| || ||||||| ||||| ||||||| |||||||||| |||| | ||||| | ||||| |||||||| || || || | ||||||||| |
|
|
| T |
4627507 |
tttaacaccactagaaggtgatggcgatgttactcaagacataccatctctttcccaatcaataagaaagaacttccttcagccctttggtgaacttctt |
4627408 |
T |
|
| Q |
319 |
gctagacttaatgactctgccacttctggtcttgtccctccagttacttgcatagtttctgatattagcatgtattttacaatacaagctgctgaagaac |
418 |
Q |
| |
|
|||| |||| ||||||| |||||| |||||||||| | |||||||||||| ||||||| ||| | |||| ||||| ||||||||||||||||||| |
|
|
| T |
4627407 |
gctaaacttcatgactcagccactgctggtcttgttgcaccagttacttgcttagtttcagattgtttaatgtcatttaccatacaagctgctgaagaac |
4627308 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 35 - 257
Target Start/End: Complemental strand, 4569611 - 4569393
Alignment:
| Q |
35 |
taacaccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggcttttacataacctttgtcaacaccgaata |
134 |
Q |
| |
|
|||| |||| |||| ||||||||||||||||| |||| |||||||||| |||||| |||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
4569611 |
taactccatatccacttcaaggccatatcaatccattattgaaactagcaaaacttcttcaccttagaggctttcacataacctttgtcaacaccgaa-- |
4569514 |
T |
|
| Q |
135 |
caatcacaaacgcttgctcaaatcaagaggtccaaaagcctttgatggtttcaccgattttacctttgagactattccagatggtttaactccgatagaa |
234 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
4569513 |
--atcacaaacatttgctcaaatcaagaggtccaaaagcctttgatggtttcactgattttacctttgagactattccagatggtttaactccgacagaa |
4569416 |
T |
|
| Q |
235 |
ggcgatggtgatgttagtcaaga |
257 |
Q |
| |
|
|| |||||||| |||||||||| |
|
|
| T |
4569415 |
ggttatggtgatattagtcaaga |
4569393 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 142; E-Value: 4e-74
Query Start/End: Original strand, 40 - 257
Target Start/End: Complemental strand, 4618837 - 4618620
Alignment:
| Q |
40 |
ccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggcttttacataacctttgtcaacaccgaatacaatc |
139 |
Q |
| |
|
|||| |||||||||||||||||||||| ||||||| ||||||| ||| || |||||||||||||||||| ||||||||||||| |||||||||||||||| |
|
|
| T |
4618837 |
ccatatccagttcaaggccatatcaatccattgttcaaactagcaaagcttcttcaccttagaggctttcacataacctttgttaacaccgaatacaatc |
4618738 |
T |
|
| Q |
140 |
acaaacgcttgctcaaatcaagaggtccaaaagcctttgatggtttcaccgattttacctttgagactattccagatggtttaactccgatagaaggcga |
239 |
Q |
| |
|
||||||||||||||||||||||||||||||| || |||||||||||||| || |||| |||||||| ||||||||||||||||| || || ||||| || |
|
|
| T |
4618737 |
acaaacgcttgctcaaatcaagaggtccaaaggcttttgatggtttcacggactttaactttgagagcattccagatggtttaacaccaatggaaggtga |
4618638 |
T |
|
| Q |
240 |
tggtgatgttagtcaaga |
257 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
4618637 |
tggtgatgttagtcaaga |
4618620 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 98 - 381
Target Start/End: Original strand, 4502943 - 4503226
Alignment:
| Q |
98 |
ttagaggcttttacataacctttgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaaagcctttgatggtttcaccgattttac |
197 |
Q |
| |
|
||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| |
|
|
| T |
4502943 |
ttagaggatttcacataacctttgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgcctttgatggtttcaatgattttac |
4503042 |
T |
|
| Q |
198 |
ctttgagactattccagatggtttaactccgatagaaggcgatggtgatgttagtcaagacatatatgctctctgtgaatcagtcagaaaaaacttccta |
297 |
Q |
| |
|
||||||||| || |||||||||||||||||| | ||||| ||||||||||||||||||||| || ||||||| | |||| ||| || || || | |
|
|
| T |
4503043 |
ctttgagaccataccagatggtttaactccggtggaaggtgatggtgatgttagtcaagacttacgcgctctctatctatcaatcaagaagaattttcac |
4503142 |
T |
|
| Q |
298 |
caacctttccgagaacttcttgctagacttaatgactctgccacttctggtcttgtccctccagttacttgcatagtttctgat |
381 |
Q |
| |
|
||| || | ||| |||||| || ||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||| |
|
|
| T |
4503143 |
caattctttggtgaatttcttgttaaacttaatgactctgccactgctggtcttatccctccagttacttgcttagtttctgat |
4503226 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 22 - 381
Target Start/End: Complemental strand, 4507465 - 4507106
Alignment:
| Q |
22 |
ccacatgcagtgttaacaccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggcttttacataacctttg |
121 |
Q |
| |
|
|||||||| ||||| | |||| |||| |||||||||||||||| ||||||| ||||||| || || ||||||||| |||||||| |||||||||||| |
|
|
| T |
4507465 |
ccacatgctgtgttgattccatatccaactcaaggccatatcaatccattgttcaaactagctaagcttcttcaccttcgaggctttcacataacctttg |
4507366 |
T |
|
| Q |
122 |
tcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaaagcctttgatggtttcaccgattttacctttgagactattccagatggttt |
221 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||| |||||||||| | ||||||||||| |
|
|
| T |
4507365 |
ttaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtgaaaatgcctttgatggtttcactgattttaactttgagactctaccagatggttt |
4507266 |
T |
|
| Q |
222 |
aactccgatagaaggcgatggtgatgttagtcaagacatatatgctctctgtgaatcagtcagaaaaaacttcctacaacctttccgagaacttcttgct |
321 |
Q |
| |
|
|||||| || || || ||||||||||||| || |||| | | || | ||||||| | ||||| || || | | ||||| || |||||||| ||| |
|
|
| T |
4507265 |
aactccaatggatggtgatggtgatgttaatccagacttgaaatctattcgtgaatcgattagaaagaaatttatttacccttttcgcgaacttctagct |
4507166 |
T |
|
| Q |
322 |
agacttaatgactctgccacttctggtcttgtccctccagttacttgcatagtttctgat |
381 |
Q |
| |
|
|||||| |||||||||| | ||||||||||| ||||| ||||||||| ||||||||||| |
|
|
| T |
4507165 |
agacttgatgactctgcgaaatctggtcttgtgcctcctgttacttgcttagtttctgat |
4507106 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 21 - 381
Target Start/End: Complemental strand, 4562221 - 4561857
Alignment:
| Q |
21 |
gccacatgcagtg----ttaacaccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggcttttacat-aa |
115 |
Q |
| |
|
||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||| ||| |||||| |||||||| ||||||||| |||| || |
|
|
| T |
4562221 |
gccacatgcagtgttaattaactccatttccagttcaaggtcatatcaatgcattgttgaaaatagcaaaactgcttcacctaagaggctttcacataaa |
4562122 |
T |
|
| Q |
116 |
cctttgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaaagcctttgatggtttcaccgattttacctttgagactattccaga |
215 |
Q |
| |
|
||||||| ||||| ||||||||||||||||| ||||| |||||||||||| ||| ||||||||||||||||| || |||| |||||||||||| ||||| |
|
|
| T |
4562121 |
cctttgttaacactgaatacaatcacaaacgtttgct-aaatcaagaggtgaaaatgcctttgatggtttcactgactttaactttgagactataccaga |
4562023 |
T |
|
| Q |
216 |
tggtttaactccgatagaaggcgatggtgatgttagtcaagacatatatgctctctgtgaatcagtcagaaaaaacttcctacaacctttccga-gaact |
314 |
Q |
| |
|
|||||||||||| | || || ||||||||| ||||||||||| || | |||| |||||||| ||| || ||||| | || || | | || ||||| |
|
|
| T |
4562022 |
tggtttaactccaaaggatggtgatggtgatattagtcaagacctacactctcttggtgaatcaatcataacgaactttc-accacttctttgatgaact |
4561924 |
T |
|
| Q |
315 |
tcttgctagacttaatgactctgccacttctggtcttgtccctccagttacttgcatagtttctgat |
381 |
Q |
| |
|
|||||||| |||| | |||||||||||| |||||||| |||| ||||| |||||| ||||||||||| |
|
|
| T |
4561923 |
tcttgctaaacttcaagactctgccactgctggtcttatccccccagtcacttgcttagtttctgat |
4561857 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 17 - 528
Target Start/End: Original strand, 4258745 - 4259256
Alignment:
| Q |
17 |
aaaagccacatgcagtgttaacaccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggcttttacataac |
116 |
Q |
| |
|
||||||||||||| ||||| | |||| ||||| |||||||||||||||| ||||||| ||||||| || || |||||| ||| ||| ||| ||||||| |
|
|
| T |
4258745 |
aaaagccacatgctgtgttgattccatatccagctcaaggccatatcaatccattgttcaaactagctaagcttcttcactttaaaggttttcacataac |
4258844 |
T |
|
| Q |
117 |
ctttgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaaagcctttgatggtttcaccgattttacctttgagactattccagat |
216 |
Q |
| |
|
|||||||||||| ||||| ||||||||||| |||||||||||||||||| ||| ||| |||||||||||| |||||||||||||||||||||| |||| |
|
|
| T |
4258845 |
ctttgtcaacactgaatataatcacaaacgtttgctcaaatcaagaggtgaaaatgccgttgatggtttcattgattttacctttgagactattcaagat |
4258944 |
T |
|
| Q |
217 |
ggtttaactccgatagaaggcgatggtgatgttagtcaagacatatatgctctctgtgaatcagtcagaaaaaacttcctacaacctttccgagaacttc |
316 |
Q |
| |
|
||| | ||||| | ||||| ||||| ||||||| ||||||| || | || | | |||| | ||||| |||||||| || || || | ||||||| |
|
|
| T |
4258945 |
ggtctgactccagtggaaggtgatggcgatgttactcaagacgtaccctccctttctcaatctataagaaagaacttccttcagccctttggtgaacttc |
4259044 |
T |
|
| Q |
317 |
ttgctagacttaatgactctgccacttctggtcttgtccctccagttacttgcatagtttctgatattagcatgtattttacaatacaagctgctgaaga |
416 |
Q |
| |
|
|||||| |||| | ||||| |||||| ||||| |||| || || ||||||||| ||||||||||| | ||||| |||| ||||||||||||||||| |
|
|
| T |
4259045 |
ttgctaaacttcaagactcagccactactggtattgttccacctgttacttgcttagtttctgattgttacatgtcatttagtatacaagctgctgaaga |
4259144 |
T |
|
| Q |
417 |
actttcaatccctgttgttttctttagttcagccagtgcatgtatgcttttgactggttttcacttacctacactgtttgacaaaggtgtcataccacta |
516 |
Q |
| |
|
| | || |||| |||||||||| | |||| |||||| ||| | ||| ||| ||| ||||| | |||||||||||| |||||| | |||||||| |
|
|
| T |
4259145 |
gcatgcactcccaattgttttcttctctccagctagtgcaagtaccttcttgtctgttttacactttcgtacactgtttgaaaaaggtctaataccactc |
4259244 |
T |
|
| Q |
517 |
aaaggtaacaat |
528 |
Q |
| |
|
|||||||||||| |
|
|
| T |
4259245 |
aaaggtaacaat |
4259256 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 22 - 244
Target Start/End: Original strand, 4513553 - 4513775
Alignment:
| Q |
22 |
ccacatgcagtgttaacaccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggcttttacataacctttg |
121 |
Q |
| |
|
|||||||| ||||| | |||| |||| ||||||||||||||||| || |||| | | ||| ||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
4513553 |
ccacatgctgtgttgattccatatccacttcaaggccatatcaatccaatgttcagattagcaaaactacttcaccttagaggctttcacataacctttg |
4513652 |
T |
|
| Q |
122 |
tcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaaagcctttgatggtttcaccgattttacctttgagactattccagatggttt |
221 |
Q |
| |
|
| ||||||||||||||||||||||| |||||||||||||||||||| || || ||||||||||||||||||||| ||||||||||||||| |||||||| |
|
|
| T |
4513653 |
ttaacaccgaatacaatcacaaacgtttgctcaaatcaagaggtcctaatgcttttgatggtttcaccgattttcgctttgagactattcctgatggttt |
4513752 |
T |
|
| Q |
222 |
aactccgatagaaggcgatggtg |
244 |
Q |
| |
|
|||||| || || |||||||||| |
|
|
| T |
4513753 |
aactccaatggatggcgatggtg |
4513775 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 18 - 263
Target Start/End: Original strand, 4265627 - 4265872
Alignment:
| Q |
18 |
aaagccacatgcagtgttaacaccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggcttttacataacc |
117 |
Q |
| |
|
|||||||||||| ||||| | ||| |||| ||||||||||||||||||||||||| || |||||||| || |||||||||||||||||| |||||||| |
|
|
| T |
4265627 |
aaagccacatgctgtgttgattccagctccatttcaaggccatatcaatgcattgttcaatctaggaaagcttcttcaccttagaggctttcacataacc |
4265726 |
T |
|
| Q |
118 |
tttgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaaagcctttgatggtttcaccgattttacctttgagactattccagatg |
217 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||||||||| | |||||||||||| || |||| |||||||| || ||||||| |
|
|
| T |
4265727 |
tttgtcaacactgaatacaatcacaaacgcttgctcaaatcaagaggtccaaattctcttgatggtttcagtgactttaagtttgagaccataccagatg |
4265826 |
T |
|
| Q |
218 |
gtttaactccgatagaaggcgatggtgatgttagtcaagacatata |
263 |
Q |
| |
|
|| ||||||| || |||||| ||||||||| || |||||||||||| |
|
|
| T |
4265827 |
gtctaactccaatggaaggcaatggtgatgctactcaagacatata |
4265872 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 40 - 257
Target Start/End: Complemental strand, 4603646 - 4603429
Alignment:
| Q |
40 |
ccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggcttttacataacctttgtcaacaccgaatacaatc |
139 |
Q |
| |
|
|||| |||| ||||||||||||||||| || |||||||||||| ||||||| ||||||||||||| ||| |||||||||||||||||||||||||||||| |
|
|
| T |
4603646 |
ccatatccacttcaaggccatatcaatccaatgttgaaactagcaaaactatttcaccttagaggatttcacataacctttgtcaacaccgaatacaatc |
4603547 |
T |
|
| Q |
140 |
acaaacgcttgctcaaatcaagaggtccaaaagcctttgatggtttcaccgattttacctttgagactattccagatggtttaactccgatagaaggcga |
239 |
Q |
| |
|
||||||| |||||||||||||||||||| || ||||| || || ||||| ||||||| |||||| || || |||||||| |||| ||||| ||||| || |
|
|
| T |
4603546 |
acaaacgtttgctcaaatcaagaggtcctaatgccttagacggcttcactgattttagctttgaaacaatcccagatggactaacaccgatggaaggtga |
4603447 |
T |
|
| Q |
240 |
tggtgatgttagtcaaga |
257 |
Q |
| |
|
|| | ||||||||||||| |
|
|
| T |
4603446 |
tgataatgttagtcaaga |
4603429 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 18 - 381
Target Start/End: Complemental strand, 4471472 - 4471112
Alignment:
| Q |
18 |
aaagccacatgcagtgttaacaccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggcttttacataacc |
117 |
Q |
| |
|
|||||||||||| || || | |||| ||||| |||||||||||||||||||||||||||||||| ||| || |||||||||||||||||| ||||||| |
|
|
| T |
4471472 |
aaagccacatgctgtattgattccatgtccagctcaaggccatatcaatgcattgttgaaactagcaaagcttcttcaccttagaggctttcacataacg |
4471373 |
T |
|
| Q |
118 |
tttgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaaagcctttgatggtttcaccgattttacctttgagactattccagatg |
217 |
Q |
| |
|
||||||||||| ||||||||||||||| ||||||||| ||||||||||| | | ||||||||||||| || |||| ||||||||| |||||| ||| |
|
|
| T |
4471372 |
tttgtcaacactgaatacaatcacaaagccttgctcaattcaagaggtcctgattctcttgatggtttcactgactttaactttgagaccattccaaatg |
4471273 |
T |
|
| Q |
218 |
gtttaactccgatagaaggcgatggtgatgttagtcaagacatatatgctctctgtgaatcagtcagaaaaaacttcctacaacctttccgagaacttct |
317 |
Q |
| |
|
|||| ||| | || ||| | ||||||| ||| |||||||||| | | | | | |||| ||| | ||||||| ||||| || | |||||||| |
|
|
| T |
4471272 |
gttttactgcaatggaaag---tggtgatcttattcaagacatacactccttttttcgatcaatcatgacggacttccttcaaccctttggtgaacttct |
4471176 |
T |
|
| Q |
318 |
tgctagacttaatgactctgccacttctggtcttgtccctccagttacttgcatagtttctgat |
381 |
Q |
| |
|
| |||||||| ||| |||||||||| |||||||| |||||||||||||||||||| |||||||| |
|
|
| T |
4471175 |
tactagacttgatgcctctgccactgctggtcttatccctccagttacttgcataatttctgat |
4471112 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 45 - 261
Target Start/End: Complemental strand, 4594541 - 4594325
Alignment:
| Q |
45 |
tccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggcttttacataacctttgtcaacaccgaatacaatcacaaa |
144 |
Q |
| |
|
|||| ||||||| ||||| ||| ||||||| ||||| | |||||| |||||||||||||| ||| ||||||||||||||||||| ||||||||||| ||| |
|
|
| T |
4594541 |
tccacttcaaggacatataaatccattgttcaaacttgcaaaacttcttcaccttagaggatttcacataacctttgtcaacactgaatacaatcataaa |
4594442 |
T |
|
| Q |
145 |
cgcttgctcaaatcaagaggtccaaaagcctttgatggtttcaccgattttacctttgagactattccagatggtttaactccgatagaaggcgatggtg |
244 |
Q |
| |
|
|| ||||||||||||||||||||||| ||||| ||||||||| | | ||||| |||||| || || ||||||||| |||| || || ||||| ||||||| |
|
|
| T |
4594441 |
cgtttgctcaaatcaagaggtccaaatgccttagatggtttccctggttttagctttgaaaccataccagatggtctaacaccaatggaaggtgatggtg |
4594342 |
T |
|
| Q |
245 |
atgttagtcaagacata |
261 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
4594341 |
atgttagtcaagacata |
4594325 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 18 - 221
Target Start/End: Complemental strand, 4462765 - 4462562
Alignment:
| Q |
18 |
aaagccacatgcagtgttaacaccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggcttttacataacc |
117 |
Q |
| |
|
|||||||||||| ||||| | |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |
|
|
| T |
4462765 |
aaagccacatgctgtgttgattccatgtccatcccaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggttttcacataacc |
4462666 |
T |
|
| Q |
118 |
tttgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaaagcctttgatggtttcaccgattttacctttgagactattccagatg |
217 |
Q |
| |
|
||||||||||| |||||||||||||| |||||||||| ||||||||||| || | | ||||||||||| || |||| ||||||||| |||||| ||| |
|
|
| T |
4462665 |
tttgtcaacactgaatacaatcacaattgcttgctcaattcaagaggtcctaattctctagatggtttcactgactttaactttgagaccattccaaatg |
4462566 |
T |
|
| Q |
218 |
gttt |
221 |
Q |
| |
|
|||| |
|
|
| T |
4462565 |
gttt |
4462562 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 122 - 459
Target Start/End: Original strand, 4298172 - 4298509
Alignment:
| Q |
122 |
tcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaaagcctttgatggtttcaccgattttacctttgagactattccagatggttt |
221 |
Q |
| |
|
|||||||||||||||||||||||| | ||||| ||||||| ||||||||||| ||||||||||||||| | |||| |||||||||||||||||||||| | |
|
|
| T |
4298172 |
tcaacaccgaatacaatcacaaacacctgctcgaatcaaggggtccaaaagcttttgatggtttcaccaactttagctttgagactattccagatggtct |
4298271 |
T |
|
| Q |
222 |
aactccgatagaaggcgatggtgatgttagtcaagacatatatgctctctgtgaatcagtcagaaaaaacttcctacaacctttccgagaacttcttgct |
321 |
Q |
| |
|
||||| | ||||| ||||| ||||||| |||||||||| |||| | ||||| ||||||| |||||||| || || || | |||||||||||| |
|
|
| T |
4298272 |
gactccaacggaaggtgatggagatgttactcaagacataccatctctttcccaatcaatcagaaagaacttccttcagccctttggtgaacttcttgct |
4298371 |
T |
|
| Q |
322 |
agacttaatgactctgccacttctggtcttgtccctccagttacttgcatagtttctgatattagcatgtattttacaatacaagctgctgaagaacttt |
421 |
Q |
| |
|
| |||| ||| ||||||||| |||||||||| || |||||||||||| ||||| ||||| || |||| ||||| ||||||||||| ||||||| | |
|
|
| T |
4298372 |
aaacttcgtgattctgccactgctggtcttgtaccaccagttacttgcttagttgctgattttttaatgtcatttaccatacaagctgcggaagaacatg |
4298471 |
T |
|
| Q |
422 |
caatccctgttgttttctttagttcagccagtgcatgt |
459 |
Q |
| |
|
|| |||| || || ||||| || |||| ||||||||| |
|
|
| T |
4298472 |
cactcccaattattctcttttgtccagctagtgcatgt |
4298509 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 45 - 340
Target Start/End: Complemental strand, 4565560 - 4565265
Alignment:
| Q |
45 |
tccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggcttttacataacctttgtcaacaccgaatacaatcacaaa |
144 |
Q |
| |
|
|||| ||||||| ||||| ||| ||||||| ||||| | |||||| |||||||||||||| ||| | ||||||||||||||||| ||||||||||| ||| |
|
|
| T |
4565560 |
tccatttcaaggacatataaatccattgttcaaacttgcaaaacttcttcaccttagaggatttcatataacctttgtcaacactgaatacaatcataaa |
4565461 |
T |
|
| Q |
145 |
cgcttgctcaaatcaagaggtccaaaagcctttgatggtttcaccgattttacctttgagactattccagatggtttaactccgatagaaggcgatggtg |
244 |
Q |
| |
|
|| ||||| ||||||||||||||||| ||||| ||||||| | | |||| |||||| || || ||||||||| |||| ||||||||||| ||||||| |
|
|
| T |
4565460 |
cgattgctaaaatcaagaggtccaaatgccttagatggttcccgtggtttttgctttgaaaccataccagatggtctaacaccgatagaaggtgatggtg |
4565361 |
T |
|
| Q |
245 |
atgttagtcaagacatatatgctctctgtgaatcagtcagaaaaaacttcctacaacctttccgagaacttcttgctagacttaatgactctgcca |
340 |
Q |
| |
|
||||||||||||| || | |||| | |||| | |||||||| ||||| ||||||| | ||||||||| | ||||||||||||||||||| |
|
|
| T |
4565360 |
atgttagtcaagatgtaccttctcttgctcaatctataagaaaaaatttccttaaacctttttgtgaacttcttacaagacttaatgactctgcca |
4565265 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 21 - 184
Target Start/End: Original strand, 4255394 - 4255545
Alignment:
| Q |
21 |
gccacatgcagtgttaacaccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggcttttacataaccttt |
120 |
Q |
| |
|
||||||||| ||||| | |||| |||||||||||||||||||||| ||| || ||||||| |||| ||||||| |||| ||||||| |
|
|
| T |
4255394 |
gccacatgctgtgttgattccatatccagttcaaggccatatcaatctattattcaaactagcaaaattacttcatcttaaaggcttt------------ |
4255481 |
T |
|
| Q |
121 |
gtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaaagcctttgatggtt |
184 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
4255482 |
gtcaacaccgaatacaatcacaaacgcttgctcgaatcaagaggtccaaaagcctttgatggtt |
4255545 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 4497814 - 4497899
Alignment:
| Q |
17 |
aaaagccacatgcagtgttaacaccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttaga |
102 |
Q |
| |
|
|||||||||||||||||||||| ||||||||| || |||||||||||||| |||||||||||||||||||| |||||||||||||| |
|
|
| T |
4497814 |
aaaagccacatgcagtgttaactccatttccaatttaaggccatatcaatccattgttgaaactaggaaaattacttcaccttaga |
4497899 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 612 - 678
Target Start/End: Complemental strand, 4581002 - 4580936
Alignment:
| Q |
612 |
tcaagttaacagattttgtaatttgatgtacagatgacagttatctcacaaacggatatttgaacac |
678 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
4581002 |
tcaagttaacagattttgtaatttgatgtacagatgacagttatctcacaaacggatatttggacac |
4580936 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 310 - 381
Target Start/End: Complemental strand, 4462476 - 4462405
Alignment:
| Q |
310 |
gaacttcttgctagacttaatgactctgccacttctggtcttgtccctccagttacttgcatagtttctgat |
381 |
Q |
| |
|
||||||||| | |||||| ||| |||||||||| | | |||| ||||||| ||||||||||||||||||||| |
|
|
| T |
4462476 |
gaacttcttacaagacttgatgcctctgccactgccgatcttatccctccggttacttgcatagtttctgat |
4462405 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 166
Target Start/End: Original strand, 4483534 - 4483569
Alignment:
| Q |
131 |
aatacaatcacaaacgcttgctcaaatcaagaggtc |
166 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||| |
|
|
| T |
4483534 |
aatacaatcacaaacgtttgctcaaatcaagaggtc |
4483569 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 4493459 - 4493401
Alignment:
| Q |
22 |
ccacatgcagtgttaacaccatttccagttcaaggccatatcaatgcattgttgaaact |
80 |
Q |
| |
|
|||||||||||||| | |||||||||| |||||| |||||||||||| || ||||||| |
|
|
| T |
4493459 |
ccacatgcagtgttgattccatttccagctcaaggtcatatcaatgcaatgctgaaact |
4493401 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0288 (Bit Score: 151; Significance: 2e-79; HSPs: 1)
Name: scaffold0288
Description:
Target: scaffold0288; HSP #1
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 40 - 417
Target Start/End: Original strand, 2043 - 2423
Alignment:
| Q |
40 |
ccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggcttttacataacctttgtcaacaccgaatacaatc |
139 |
Q |
| |
|
|||| |||||||||||||||||||||| ||||||| ||||||| ||| || |||||||||||||||||| ||||||||||||||||||| |||||||||| |
|
|
| T |
2043 |
ccatatccagttcaaggccatatcaatccattgttcaaactagcaaagcttcttcaccttagaggctttcacataacctttgtcaacactgaatacaatc |
2142 |
T |
|
| Q |
140 |
acaaacgcttgctcaaatcaagaggtccaaaagcctttgatggtttcaccgattttacctttgagactattccagatggtttaactcc---gatagaagg |
236 |
Q |
| |
|
| |||||||||||||||||||||||||| || || ||||||||||| | |||||| ||| ||||||||||| |||||||||||||| | ||| | |
|
|
| T |
2143 |
ataaacgcttgctcaaatcaagaggtcctaatgctcttgatggtttcgctgatttttgcttcgagactattcccgatggtttaactccagtggaagatga |
2242 |
T |
|
| Q |
237 |
cgatggtgatgttagtcaagacatatatgctctctgtgaatcagtcagaaaaaacttcctacaacctttccgagaacttcttgctagacttaatgactct |
336 |
Q |
| |
|
|||||| ||||||||||||||||| |||| ||| ||||| |||||||||||||||| || || || |||||||||||||||||| | || ||| |
|
|
| T |
2243 |
tgatggtaatgttagtcaagacatactctctctttgtaaatcaatcagaaaaaacttccttcacttctttcgcgaacttcttgctagacttgacgagtct |
2342 |
T |
|
| Q |
337 |
gccacttctggtcttgtccctccagttacttgcatagtttctgatattagcatgtattttacaatacaagctgctgaagaa |
417 |
Q |
| |
|
|||| |||||||||| |||||||||| ||| || ||||||||||| | ||||| ||||| |||||||||||||||||| |
|
|
| T |
2343 |
gccaattctggtcttatccctccagtaactagcttagtttctgattgttacatgtcatttaccatacaagctgctgaagaa |
2423 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 148; Significance: 9e-78; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 148; E-Value: 9e-78
Query Start/End: Original strand, 190 - 678
Target Start/End: Original strand, 16685029 - 16685523
Alignment:
| Q |
190 |
gattttacctttgagactattccagatggtttaactccgatagaaggcgatggtgatgttagtcaagacatatatgctctctgtgaatcagtcagaaaaa |
289 |
Q |
| |
|
||||||| |||||||||||||||| |||||||| |||| | || || ||||| |||||||||||||||||| | ||||| ||| ||||| ||||||| | |
|
|
| T |
16685029 |
gattttagctttgagactattccatatggtttacctccaacggatggtgatggcgatgttagtcaagacatacacgctctttgtaaatcaatcagaaaga |
16685128 |
T |
|
| Q |
290 |
acttcctacaacctttccgagaacttcttgctagacttaatgactctgc------ca-cttctggtcttgtccctccagttacttgcatagtttctgata |
382 |
Q |
| |
|
||||||| ||||| || || |||| ||||||||||||| ||||| ||| || | |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16685129 |
acttcctccaaccctttcgcgaacatcttgctagacttcatgaccgtgcacggtgcatcatctggtcttgtccctccagttacttgcatagtttctgata |
16685228 |
T |
|
| Q |
383 |
ttagcatgtattttacaatacaagctgctgaagaactttcaatccctgttgttttctttagttcagccagtgcatgtatgcttttgactggttttcactt |
482 |
Q |
| |
|
||||||||| |||||| |||||||||||||||||||||||| ||||||||||| |||||| | || | | |||||||| |||| ||| | |||| || |
|
|
| T |
16685229 |
ttagcatgtcttttactatacaagctgctgaagaactttcactccctgttgttctctttaatccatcgaatgcatgtacatttttaacttttattcattt |
16685328 |
T |
|
| Q |
483 |
acctacactgtttgacaaaggtgtcataccactaaaaggtaacaatcaattaatcttctttctttcttcatacctgtattgtagttaaagtattaatatg |
582 |
Q |
| |
|
|||| |||| || |||||| ||||||||||||| ||||| |||| ||||||||||||||||||||| |||| |||||| ||| || ||||| |
|
|
| T |
16685329 |
tagtacattgttggataaaggtctcataccactaaatggtaa----caatgaatcttctttctttcttcatatatgtagaatagttagagtgttcatatg |
16685424 |
T |
|
| Q |
583 |
acatttgttacaagtatggagattccatatcaagttaacagattttgt-aatttgatgta--cagatgacagttatctcacaaacggatatttgaacac |
678 |
Q |
| |
|
|||| |||| |||||||||||||| || | ||| ||||| |||||| |||||||| || ||||||| |||||||| ||||||||||||||| |||| |
|
|
| T |
16685425 |
acatatgtttgaagtatggagattcaattttaagctaacaacttttgtaaatttgatatatgcagatgagagttatctgacaaacggatatttggacac |
16685523 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 17 - 529
Target Start/End: Original strand, 20862379 - 20862885
Alignment:
| Q |
17 |
aaaagccacatgcagtgttaacaccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggcttttacataac |
116 |
Q |
| |
|
|||| ||||||||||||||||| |||| |||| ||||||| ||||||||| || |||| ||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
20862379 |
aaaaaccacatgcagtgttaactccatatccacttcaaggtcatatcaatccaatgttaaaactagcaaaactacttcaccttagaggcttttacataac |
20862478 |
T |
|
| Q |
117 |
ctttgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaaagcctttgatggtttcaccgattttacctttgagactattccagat |
216 |
Q |
| |
|
|||||||| || ||||||||||||||||||||||| || |||| ||||||| | |||||||||||||||| || ||| ||||||||| |||||||| |
|
|
| T |
20862479 |
atttgtcaatactgaatacaatcacaaacgcttgcttaagtcaatgggtccaataccctttgatggtttcactgactttcgctttgagaccgttccagat |
20862578 |
T |
|
| Q |
217 |
ggtttaactccgatagaaggcgatggtgatgttagtcaagacatatatgctctctgtgaatcagtcagaaaaaacttcctacaacctttccgagaacttc |
316 |
Q |
| |
|
|||| |||| | | | || || |||||||||||||||| | | |||| |||||| | |||||| |||||| | | ||| || ||||||| |
|
|
| T |
20862579 |
ggttcaacttc---acatgg---tgatgatgttagtcaagacttccaatctcttcgtgaattaatcagaacgaacttcatcgacagttttcgtgaacttc |
20862672 |
T |
|
| Q |
317 |
ttgctagacttaatgactctgccacttctggtcttgtccctccagttacttgcatagtttctgatattagcatgtattttacaatacaagctgctgaaga |
416 |
Q |
| |
|
|||| | |||| |||||||| ||| ||||||||| | ||||| ||||||||| |||||||||||| | ||||| |||| ||||||| ||||||||| |
|
|
| T |
20862673 |
ttgccaaacttcatgactcttccaaatctggtcttatacctcctgttacttgcttagtttctgatagtttcatgtcagttaccatacaagttgctgaaga |
20862772 |
T |
|
| Q |
417 |
actttcaatccctgttgttttctttagttcagccagtgcatgtatgcttttgactggttttcacttacctacactgtttgacaaaggtgtcataccacta |
516 |
Q |
| |
|
|||| || |||| ||||| || ||| || | ||||| ||| | ||| ||| ||| || |||| |||| || |||| |||||||||||||| || |
|
|
| T |
20862773 |
acttgcactcccaattgttctccttatcccatctagtgcttgttctttcttgtctgctttacatttacgtacattgattgagaaaggtgtcatacccctc |
20862872 |
T |
|
| Q |
517 |
aaaggtaacaatc |
529 |
Q |
| |
|
||||||||||||| |
|
|
| T |
20862873 |
aaaggtaacaatc |
20862885 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 23 - 255
Target Start/End: Complemental strand, 1676074 - 1675842
Alignment:
| Q |
23 |
cacatgcagtgttaacaccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggcttttacataacctttgt |
122 |
Q |
| |
|
||||||| ||||| | |||| ||||| |||||||||||||||| ||||||| ||||||| |||||| ||||||||||||||| | | |||||| ||| |
|
|
| T |
1676074 |
cacatgctgtgttcattccatatccagctcaaggccatatcaatccattgttcaaactagcaaaacttattcaccttagaggctctcatgtaacctatgt |
1675975 |
T |
|
| Q |
123 |
caacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaaagcctttgatggtttcaccgattttacctttgagactattccagatggttta |
222 |
Q |
| |
|
|||||| ||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||| ||||||| |||||| || || ||||||||| || |
|
|
| T |
1675974 |
caacactgaatacaatcacaaacgtttgctcaaatcaagaggtccaactgccttggatggtttcactgattttagctttgaaaccatcccagatggtcta |
1675875 |
T |
|
| Q |
223 |
actccgatagaaggcgatggtgatgttagtcaa |
255 |
Q |
| |
|
|| || ||||||| |||||||||||||||||| |
|
|
| T |
1675874 |
acaccactagaaggtgatggtgatgttagtcaa |
1675842 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0475 (Bit Score: 142; Significance: 4e-74; HSPs: 1)
Name: scaffold0475
Description:
Target: scaffold0475; HSP #1
Raw Score: 142; E-Value: 4e-74
Query Start/End: Original strand, 17 - 381
Target Start/End: Complemental strand, 2383 - 2016
Alignment:
| Q |
17 |
aaaagccacatgcagtgttaacaccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggcttttacataac |
116 |
Q |
| |
|
|||| |||||||| ||||| | |||| |||||||||||||||||||||| |||| || ||||||| ||| || |||||||||||||||||| ||||||| |
|
|
| T |
2383 |
aaaaaccacatgctgtgttgattccatatccagttcaaggccatatcaatccattattcaaactagcaaagcttcttcaccttagaggctttcacataac |
2284 |
T |
|
| Q |
117 |
ctttgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaaagcctttgatggtttcaccgattttacctttgagactattccagat |
216 |
Q |
| |
|
|||||||||||| ||||||||||| |||||||||||||||||||||||||| || || ||||||||||| | |||||| ||| ||||||||||| ||| |
|
|
| T |
2283 |
ctttgtcaacactgaatacaatcataaacgcttgctcaaatcaagaggtcctaatgctcttgatggtttcgctgatttttgcttcgagactattcccgat |
2184 |
T |
|
| Q |
217 |
ggtttaactcc---gatagaaggcgatggtgatgttagtcaagacatatatgctctctgtgaatcagtcagaaaaaacttcctacaacctttccgagaac |
313 |
Q |
| |
|
||||||||||| | ||| | |||||| ||||||||||||||||| |||| ||| ||||| |||||||||||||||| || || || |||| |
|
|
| T |
2183 |
ggtttaactccagtggaagatgatgatggtaatgttagtcaagacatactctctctttgtaaatcaatcagaaaaaacttccttcacttctttcgcgaac |
2084 |
T |
|
| Q |
314 |
ttcttgctagacttaatgactctgccacttctggtcttgtccctccagttacttgcatagtttctgat |
381 |
Q |
| |
|
|||||||||||||| | || ||||||| |||||||||| |||||||||| ||| || ||||||||||| |
|
|
| T |
2083 |
ttcttgctagacttgacgagtctgccaattctggtcttatccctccagtaactagcttagtttctgat |
2016 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 130; Significance: 5e-67; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 22 - 255
Target Start/End: Complemental strand, 1282987 - 1282754
Alignment:
| Q |
22 |
ccacatgcagtgttaacaccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggcttttacataacctttg |
121 |
Q |
| |
|
|||||||| ||||| | |||| ||||| |||||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1282987 |
ccacatgctgtgttgattccatatccagctcaaggccatatcaatccattgttcaaactagcaaaactacttcaccttagaggcttttacataacctttg |
1282888 |
T |
|
| Q |
122 |
tcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaaagcctttgatggtttcaccgattttacctttgagactattccagatggttt |
221 |
Q |
| |
|
| || || ||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||| ||||||| |||||| || || ||||||||| | |
|
|
| T |
1282887 |
ttaatactgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgccctagatggtttcactgattttagctttgaaaccatcccagatggtct |
1282788 |
T |
|
| Q |
222 |
aactccgatagaaggcgatggtgatgttagtcaa |
255 |
Q |
| |
|
||| | ||||||| |||||||||||||||||| |
|
|
| T |
1282787 |
aacatcactagaaggtgatggtgatgttagtcaa |
1282754 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 115; Significance: 5e-58; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 45 - 263
Target Start/End: Complemental strand, 24104626 - 24104408
Alignment:
| Q |
45 |
tccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggcttttacataacctttgtcaacaccgaatacaatcacaaa |
144 |
Q |
| |
|
|||| ||||||| ||||||||||||||||| ||||||||||| || |||||||||||||||||| |||||||||| || ||||||||||||||||||||| |
|
|
| T |
24104626 |
tccatttcaaggtcatatcaatgcattgttcaaactaggaaagcttcttcaccttagaggctttcacataaccttcgtgaacaccgaatacaatcacaaa |
24104527 |
T |
|
| Q |
145 |
cgcttgctcaaatcaagaggtccaaaagcctttgatggtttcaccgattttacctttgagactattccagatggtttaactccgatagaaggcgatggtg |
244 |
Q |
| |
|
||||||||| ||||||||| ||| || | |||||||||||| || |||| ||||||||| || ||||||||| ||||||| || |||||| |||||| |
|
|
| T |
24104526 |
cgcttgctcgaatcaagagatcctaattctcttgatggtttcaatgactttaactttgagaccataccagatggtctaactccaatggaaggcaatggtg |
24104427 |
T |
|
| Q |
245 |
atgttagtcaagacatata |
263 |
Q |
| |
|
|||||| |||||||||||| |
|
|
| T |
24104426 |
atgttactcaagacatata |
24104408 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0199 (Bit Score: 109; Significance: 2e-54; HSPs: 1)
Name: scaffold0199
Description:
Target: scaffold0199; HSP #1
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 23 - 255
Target Start/End: Complemental strand, 1311 - 1079
Alignment:
| Q |
23 |
cacatgcagtgttaacaccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggcttttacataacctttgt |
122 |
Q |
| |
|
||||||| ||||| | |||| ||||| |||||||||||||||| ||||||| ||||||| |||||| ||||||||||||||| | | |||||| ||| |
|
|
| T |
1311 |
cacatgctgtgttcattccatatccagctcaaggccatatcaatccattgttcaaactagcaaaacttattcaccttagaggctctcatgtaacctatgt |
1212 |
T |
|
| Q |
123 |
caacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaaagcctttgatggtttcaccgattttacctttgagactattccagatggttta |
222 |
Q |
| |
|
|||||| ||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||| ||||||| |||||| || || ||||||||| || |
|
|
| T |
1211 |
caacactgaatacaatcacaaacgtttgctcaaatcaagaggtccaactgccttggatggtttcactgattttagctttgaaaccatcccagatggtcta |
1112 |
T |
|
| Q |
223 |
actccgatagaaggcgatggtgatgttagtcaa |
255 |
Q |
| |
|
|| || ||||||| |||||||||||||||||| |
|
|
| T |
1111 |
acaccactagaaggtgatggtgatgttagtcaa |
1079 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 108; Significance: 7e-54; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 17 - 416
Target Start/End: Complemental strand, 3088304 - 3087905
Alignment:
| Q |
17 |
aaaagccacatgcagtgttaacaccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggcttttacataac |
116 |
Q |
| |
|
||||||||||||| ||||| | |||| |||| ||||||| ||||| ||| ||||||| ||||||| |||||| |||||||||| ||||||| ||||||| |
|
|
| T |
3088304 |
aaaagccacatgctgtgttgattccatatccacttcaaggtcatataaatccattgttaaaactagcaaaacttcttcaccttaaaggctttcacataac |
3088205 |
T |
|
| Q |
117 |
ctttgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaaagcctttgatggtttcaccgattttacctttgagactattccagat |
216 |
Q |
| |
|
||||||||| ||||||||||||||||| || ||||| |||||||||||| | || | ||||||||||||| |||||| |||||||||||| | |||| |
|
|
| T |
3088204 |
ctttgtcaataccgaatacaatcacaaccgtttgcttaaatcaagaggttctaattctcttgatggtttcactgattttgtctttgagactatccaagat |
3088105 |
T |
|
| Q |
217 |
ggtttaactccgatagaaggcgatggtgatgttagtcaagacatatatgctctctgtgaatcagtcagaaaaaacttcctacaacctttccgagaacttc |
316 |
Q |
| |
|
||| ||||||| || ||||| |||||||||||||||||||| | |||| ||| ||||||| |||| |||||| | ||||| || | ||||||| |
|
|
| T |
3088104 |
ggtctaactccaatggaaggtaatggtgatgttagtcaagacttggcatctctttgtcaatcagttggaaagaacttcattcaaccctttggtgaacttc |
3088005 |
T |
|
| Q |
317 |
ttgctagacttaatgactctgccacttctggtcttgtccctccagttacttgcatagtttctgatattagcatgtattttacaatacaagctgctgaaga |
416 |
Q |
| |
|
|| | || || ||||||||||| | |||||||| | || |||||||||||| |||| ||||| || |||| ||||| ||||||| ||||||||| |
|
|
| T |
3088004 |
ttcgtcgaattcatgactctgccgatgctggtcttattccaccagttacttgcttagtagctgatttttacatgccatttaccatacaagttgctgaaga |
3087905 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0477 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0477
Description:
Target: scaffold0477; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 310 - 418
Target Start/End: Original strand, 3384 - 3492
Alignment:
| Q |
310 |
gaacttcttgctagacttaatgactctgccacttctggtcttgtccctccagttacttgcatagtttctgatattagcatgtattttacaatacaagctg |
409 |
Q |
| |
|
|||||||||| || |||| |||||||||||||| |||||||||| || | ||||||||||||||| ||||| | |||| ||||| |||||||||| |
|
|
| T |
3384 |
gaacttcttgttaaacttcatgactctgccactgctggtcttgttccacaagttacttgcatagtcgctgattgttacatgccatttaccatacaagctg |
3483 |
T |
|
| Q |
410 |
ctgaagaac |
418 |
Q |
| |
|
||||||||| |
|
|
| T |
3484 |
ctgaagaac |
3492 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 167
Target Start/End: Original strand, 1349571 - 1349636
Alignment:
| Q |
102 |
aggcttttacataacctttgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtcc |
167 |
Q |
| |
|
|||||| |||||||| ||||||||||| |||| ||| ||||||||||| |||||||| | |||||| |
|
|
| T |
1349571 |
aggcttctacataacatttgtcaacactgaattcaaccacaaacgcttactcaaatccataggtcc |
1349636 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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