View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8544_low_1 (Length: 506)

Name: NF8544_low_1
Description: NF8544
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8544_low_1
NF8544_low_1
[»] chr3 (92 HSPs)
chr3 (74-483)||(37996510-37996933)
chr3 (74-479)||(7327708-7328119)
chr3 (78-351)||(1528502-1528779)
chr3 (305-480)||(48123545-48123720)
chr3 (305-480)||(25936301-25936475)
chr3 (305-480)||(1678903-1679078)
chr3 (305-480)||(52505046-52505221)
chr3 (74-264)||(10225081-10225273)
chr3 (305-480)||(22610500-22610673)
chr3 (75-267)||(22611302-22611495)
chr3 (75-267)||(40497327-40497531)
chr3 (305-480)||(45532286-45532459)
chr3 (75-306)||(28704724-28704968)
chr3 (305-480)||(28705458-28705636)
chr3 (74-267)||(52505751-52505954)
chr3 (359-484)||(1528808-1528929)
chr3 (75-267)||(25936979-25937184)
chr3 (305-480)||(10224382-10224548)
chr3 (75-225)||(2567358-2567508)
chr3 (359-480)||(22311104-22311224)
chr3 (78-181)||(53192498-53192602)
chr3 (76-264)||(35389748-35389938)
chr3 (359-480)||(50286970-50287090)
chr3 (74-264)||(52121176-52121367)
chr3 (75-267)||(1679625-1679819)
chr3 (73-218)||(55268983-55269135)
chr3 (359-480)||(28882303-28882423)
chr3 (359-480)||(52121536-52121658)
chr3 (76-267)||(22310703-22310908)
chr3 (78-181)||(47642017-47642120)
chr3 (77-181)||(28882682-28882797)
chr3 (359-480)||(35390124-35390241)
chr3 (78-181)||(48122825-48122939)
chr3 (76-218)||(19879070-19879213)
chr3 (418-480)||(42464363-42464425)
chr3 (77-132)||(19420904-19420959)
chr3 (76-139)||(42464964-42465027)
chr3 (78-139)||(6134439-6134500)
chr3 (134-267)||(45532908-45533031)
chr3 (359-422)||(30787354-30787418)
chr3 (75-130)||(30787628-30787683)
chr3 (76-181)||(21006499-21006605)
chr3 (78-132)||(22289785-22289839)
chr3 (78-139)||(13748504-13748565)
chr3 (370-422)||(42229914-42229967)
chr3 (359-434)||(20509937-20510013)
chr3 (360-422)||(13352988-13353051)
chr3 (76-139)||(29915859-29915922)
chr3 (76-139)||(29965012-29965075)
chr3 (88-139)||(49419245-49419296)
chr3 (359-420)||(19421677-19421739)
chr3 (212-267)||(33240085-33240142)
chr3 (369-422)||(48334154-48334208)
chr3 (86-131)||(13353251-13353296)
chr3 (362-422)||(19349419-19349480)
chr3 (222-267)||(42464845-42464890)
chr3 (370-422)||(48333212-48333265)
chr3 (77-218)||(52684200-52684352)
chr3 (360-480)||(52684589-52684697)
chr3 (79-139)||(28968511-28968571)
chr3 (75-139)||(41742129-41742193)
chr3 (75-114)||(33238720-33238759)
chr3 (134-181)||(45347364-45347411)
chr3 (222-261)||(48122960-48122999)
chr3 (76-141)||(2122702-2122770)
chr3 (88-181)||(5271489-5271583)
chr3 (434-480)||(7899467-7899513)
chr3 (361-434)||(28968774-28968848)
chr3 (361-434)||(47642269-47642343)
chr3 (222-267)||(52684386-52684432)
chr3 (360-428)||(21006150-21006219)
chr3 (362-422)||(22289536-22289597)
chr3 (78-139)||(30226420-30226481)
chr3 (381-428)||(25701046-25701094)
chr3 (222-264)||(28882608-28882651)
chr3 (134-181)||(33240017-33240064)
chr3 (75-138)||(38889138-38889200)
chr3 (362-428)||(39664657-39664724)
chr3 (76-139)||(42229672-42229735)
chr3 (135-181)||(983262-983308)
chr3 (446-480)||(2567017-2567051)
chr3 (446-480)||(21006111-21006145)
chr3 (76-138)||(21157787-21157849)
chr3 (434-480)||(45057049-45057095)
chr3 (88-141)||(3983707-3983760)
chr3 (359-404)||(21157540-21157585)
chr3 (362-422)||(29916034-29916095)
chr3 (362-422)||(29965187-29965248)
chr3 (144-181)||(42464911-42464948)
chr3 (89-138)||(47750948-47750997)
chr3 (370-421)||(28548296-28548348)
chr3 (278-306)||(53192692-53192720)
[»] chr1 (83 HSPs)
chr1 (75-483)||(36367399-36367813)
chr1 (78-484)||(37104120-37104538)
chr1 (305-480)||(28948431-28948606)
chr1 (305-480)||(5984896-5985069)
chr1 (305-480)||(25257326-25257499)
chr1 (305-480)||(6916083-6916261)
chr1 (305-480)||(38331158-38331336)
chr1 (359-483)||(36363275-36363399)
chr1 (73-306)||(52895590-52895836)
chr1 (74-306)||(6916751-6916996)
chr1 (305-480)||(52894922-52895100)
chr1 (313-480)||(8132899-8133066)
chr1 (75-267)||(38330424-38330628)
chr1 (303-480)||(30324427-30324602)
chr1 (75-264)||(38948729-38948929)
chr1 (75-267)||(28949158-28949362)
chr1 (72-267)||(1043221-1043427)
chr1 (74-267)||(1036455-1036659)
chr1 (75-267)||(3426845-3427051)
chr1 (305-480)||(3427559-3427740)
chr1 (359-477)||(43190018-43190137)
chr1 (360-480)||(28658625-28658746)
chr1 (78-306)||(20409443-20409672)
chr1 (359-480)||(14334532-14334652)
chr1 (359-480)||(31653039-31653159)
chr1 (75-181)||(8132180-8132297)
chr1 (87-267)||(28659228-28659409)
chr1 (75-139)||(37346905-37346969)
chr1 (75-180)||(43189652-43189768)
chr1 (359-480)||(13012620-13012733)
chr1 (360-428)||(24851732-24851801)
chr1 (74-266)||(13012921-13013114)
chr1 (222-306)||(8132318-8132401)
chr1 (75-139)||(2364674-2364738)
chr1 (79-139)||(5984228-5984288)
chr1 (75-139)||(9781639-9781703)
chr1 (80-139)||(41676046-41676105)
chr1 (84-220)||(38218404-38218536)
chr1 (209-267)||(14334292-14334352)
chr1 (222-267)||(43189790-43189835)
chr1 (359-434)||(47654925-47655001)
chr1 (362-428)||(9528653-9528720)
chr1 (75-138)||(34096610-34096673)
chr1 (359-463)||(37346595-37346699)
chr1 (76-126)||(24849362-24849412)
chr1 (222-267)||(25256760-25256806)
chr1 (75-132)||(2472918-2472975)
chr1 (76-180)||(3708284-3708399)
chr1 (222-306)||(31653299-31653385)
chr1 (75-132)||(34432447-34432504)
chr1 (365-428)||(9781887-9781951)
chr1 (75-139)||(29167944-29168008)
chr1 (80-132)||(32381123-32381175)
chr1 (361-420)||(36551647-36551707)
chr1 (134-181)||(25256683-25256730)
chr1 (134-181)||(30323782-30323829)
chr1 (134-181)||(31653406-31653453)
chr1 (362-428)||(34096362-34096429)
chr1 (384-434)||(37922478-37922529)
chr1 (78-132)||(10822402-10822456)
chr1 (76-138)||(14167082-14167144)
chr1 (362-422)||(34432230-34432291)
chr1 (78-154)||(8829751-8829826)
chr1 (361-420)||(24589918-24589978)
chr1 (359-422)||(32380873-32380937)
chr1 (83-139)||(33039618-33039674)
chr1 (79-127)||(36551492-36551540)
chr1 (80-132)||(40775997-40776049)
chr1 (146-181)||(5984306-5984341)
chr1 (370-428)||(10822644-10822703)
chr1 (74-116)||(14334168-14334209)
chr1 (78-132)||(24590179-24590233)
chr1 (222-267)||(30323861-30323907)
chr1 (76-134)||(37922265-37922323)
chr1 (85-122)||(10763668-10763705)
chr1 (144-181)||(14334237-14334274)
chr1 (370-422)||(29168197-29168250)
chr1 (75-132)||(30323712-30323769)
chr1 (144-181)||(37346852-37346889)
chr1 (370-421)||(10763903-10763955)
chr1 (78-138)||(15417453-15417513)
chr1 (76-132)||(25256614-25256670)
chr1 (76-132)||(29861799-29861855)
[»] chr7 (84 HSPs)
chr7 (75-483)||(48163402-48163826)
chr7 (74-483)||(27353914-27354339)
chr7 (76-483)||(27555066-27555489)
chr7 (75-481)||(16850780-16851199)
chr7 (305-480)||(40096378-40096556)
chr7 (305-480)||(36661185-36661359)
chr7 (75-267)||(34238152-34238355)
chr7 (74-306)||(40095643-40095888)
chr7 (305-480)||(11830409-11830582)
chr7 (76-267)||(42896997-42897178)
chr7 (76-267)||(11829684-11829887)
chr7 (75-267)||(38262993-38263196)
chr7 (305-480)||(27397342-27397514)
chr7 (74-264)||(39520793-39520974)
chr7 (359-480)||(1042803-1042925)
chr7 (75-264)||(47238537-47238728)
chr7 (359-480)||(26773316-26773438)
chr7 (359-478)||(8029070-8029190)
chr7 (359-480)||(47237974-47238095)
chr7 (83-266)||(36202717-36202891)
chr7 (359-480)||(16563978-16564098)
chr7 (359-480)||(16601564-16601684)
chr7 (75-254)||(26773643-26773833)
chr7 (78-267)||(16564297-16564476)
chr7 (78-267)||(16601186-16601365)
chr7 (78-267)||(27397975-27398165)
chr7 (78-181)||(1043075-1043189)
chr7 (374-480)||(4291946-4292051)
chr7 (75-181)||(25969391-25969508)
chr7 (207-267)||(26843911-26843971)
chr7 (75-181)||(554894-555001)
chr7 (76-139)||(4291507-4291570)
chr7 (73-266)||(34122546-34122740)
chr7 (78-166)||(15878374-15878462)
chr7 (359-422)||(19820791-19820855)
chr7 (359-434)||(23078890-23078966)
chr7 (76-139)||(23079097-23079160)
chr7 (362-428)||(23969935-23970002)
chr7 (362-428)||(48153784-48153851)
chr7 (418-480)||(39521396-39521458)
chr7 (89-181)||(9250426-9250529)
chr7 (76-132)||(33454065-33454121)
chr7 (76-132)||(44960199-44960255)
chr7 (75-138)||(11058346-11058409)
chr7 (361-434)||(1400049-1400123)
chr7 (222-264)||(8028829-8028871)
chr7 (362-422)||(26973296-26973357)
chr7 (211-267)||(36660608-36660665)
chr7 (209-264)||(4291630-4291686)
chr7 (359-434)||(33454328-33454404)
chr7 (359-437)||(19510886-19510965)
chr7 (86-215)||(26845866-26846006)
chr7 (76-180)||(26973062-26973163)
chr7 (362-422)||(36413609-36413669)
chr7 (76-132)||(19510518-19510574)
chr7 (76-132)||(38064590-38064646)
chr7 (370-428)||(21409637-21409696)
chr7 (78-141)||(35159862-35159925)
chr7 (359-428)||(38064928-38064999)
chr7 (360-422)||(44269979-44270042)
chr7 (361-422)||(15878217-15878279)
chr7 (363-428)||(35160124-35160194)
chr7 (144-181)||(47720176-47720213)
chr7 (145-181)||(8028772-8028808)
chr7 (222-266)||(19510655-19510699)
chr7 (78-138)||(36758054-36758114)
chr7 (78-138)||(36767578-36767638)
chr7 (359-434)||(36763572-36763652)
chr7 (362-404)||(554724-554766)
chr7 (135-181)||(1363016-1363062)
chr7 (434-480)||(9250059-9250105)
chr7 (434-480)||(9283609-9283655)
chr7 (434-480)||(15878172-15878218)
chr7 (434-480)||(25969828-25969874)
chr7 (446-480)||(38065003-38065037)
chr7 (75-132)||(21409385-21409442)
chr7 (144-181)||(21409465-21409502)
chr7 (144-181)||(36660552-36660589)
chr7 (361-434)||(36757793-36757871)
chr7 (361-434)||(36767317-36767395)
chr7 (278-306)||(34122486-34122514)
chr7 (134-178)||(38064659-38064703)
chr7 (84-132)||(44269729-44269777)
chr7 (87-139)||(48153620-48153672)
[»] chr8 (75 HSPs)
chr8 (71-484)||(22201038-22201462)
chr8 (306-479)||(5540142-5540315)
chr8 (305-480)||(4246648-4246823)
chr8 (305-480)||(45216444-45216619)
chr8 (305-480)||(34900590-34900768)
chr8 (305-480)||(28875789-28875964)
chr8 (305-480)||(32760075-32760248)
chr8 (305-480)||(32638438-32638612)
chr8 (75-267)||(34901299-34901503)
chr8 (305-480)||(36484144-36484317)
chr8 (305-471)||(12579770-12579934)
chr8 (75-306)||(43771581-43771825)
chr8 (75-267)||(16384614-16384818)
chr8 (305-480)||(43770928-43771113)
chr8 (75-267)||(32759370-32759573)
chr8 (74-267)||(13422204-13422409)
chr8 (74-267)||(12580471-12580675)
chr8 (75-267)||(28876482-28876687)
chr8 (359-480)||(6028864-6028986)
chr8 (359-480)||(32877829-32877951)
chr8 (305-480)||(37669289-37669462)
chr8 (74-306)||(45217109-45217342)
chr8 (75-267)||(36483432-36483625)
chr8 (78-218)||(32638833-32638974)
chr8 (359-480)||(25022528-25022648)
chr8 (75-306)||(4245937-4246158)
chr8 (360-480)||(19436627-19436746)
chr8 (360-480)||(19572776-19572895)
chr8 (75-264)||(32877434-32877626)
chr8 (75-181)||(6028484-6028601)
chr8 (359-480)||(19947599-19947719)
chr8 (76-181)||(2872914-2873030)
chr8 (75-181)||(5539433-5539538)
chr8 (359-480)||(42949443-42949563)
chr8 (78-181)||(12357889-12357992)
chr8 (78-181)||(12359017-12359120)
chr8 (76-139)||(19436272-19436335)
chr8 (76-139)||(19572421-19572484)
chr8 (76-181)||(25022123-25022239)
chr8 (359-428)||(27108982-27109052)
chr8 (85-139)||(32424928-32424982)
chr8 (74-132)||(37372255-37372313)
chr8 (74-132)||(37668578-37668636)
chr8 (135-181)||(42949198-42949244)
chr8 (222-267)||(6028622-6028667)
chr8 (211-267)||(5539561-5539617)
chr8 (80-248)||(19947934-19948112)
chr8 (76-132)||(40412433-40412489)
chr8 (75-138)||(32678-32741)
chr8 (75-138)||(29355620-29355683)
chr8 (222-267)||(25022260-25022306)
chr8 (223-264)||(2872842-2872883)
chr8 (362-422)||(3892206-3892267)
chr8 (78-139)||(7411636-7411697)
chr8 (360-480)||(8170854-8170962)
chr8 (83-139)||(5818368-5818424)
chr8 (360-422)||(20182629-20182692)
chr8 (76-139)||(27886188-27886251)
chr8 (76-139)||(27944846-27944909)
chr8 (222-267)||(40412599-40412645)
chr8 (370-418)||(38388939-38388988)
chr8 (360-428)||(40412805-40412874)
chr8 (220-267)||(19436393-19436441)
chr8 (220-267)||(19572542-19572590)
chr8 (75-139)||(38388664-38388728)
chr8 (78-137)||(27109223-27109282)
chr8 (133-180)||(30804750-30804797)
chr8 (222-267)||(8171126-8171172)
chr8 (381-422)||(27968375-27968417)
chr8 (434-480)||(27968416-27968462)
chr8 (446-480)||(40412879-40412913)
chr8 (370-430)||(5818138-5818199)
chr8 (84-132)||(20182380-20182428)
chr8 (78-122)||(28737255-28737299)
chr8 (278-306)||(34901258-34901286)
[»] chr6 (43 HSPs)
chr6 (88-484)||(31195569-31195977)
chr6 (305-481)||(7188000-7188177)
chr6 (305-480)||(1036035-1036213)
chr6 (75-306)||(1036703-1036947)
chr6 (305-480)||(8357601-8357775)
chr6 (78-267)||(8356958-8357158)
chr6 (359-475)||(31740442-31740559)
chr6 (78-306)||(7188667-7188894)
chr6 (359-480)||(32130282-32130402)
chr6 (78-181)||(31079612-31079715)
chr6 (76-181)||(32130663-32130779)
chr6 (74-181)||(10894587-10894694)
chr6 (359-434)||(10894300-10894376)
chr6 (75-139)||(27083982-27084046)
chr6 (73-181)||(3212472-3212591)
chr6 (78-138)||(29892966-29893026)
chr6 (75-139)||(26327152-26327216)
chr6 (78-139)||(234306-234367)
chr6 (78-139)||(11105286-11105347)
chr6 (362-422)||(19128395-19128456)
chr6 (362-422)||(27084216-27084277)
chr6 (360-433)||(7255183-7255258)
chr6 (76-139)||(6708098-6708161)
chr6 (87-138)||(32017986-32018037)
chr6 (209-267)||(32130582-32130645)
chr6 (76-181)||(25834500-25834616)
chr6 (209-267)||(31741096-31741154)
chr6 (362-422)||(234551-234612)
chr6 (370-418)||(22988923-22988972)
chr6 (370-418)||(23799424-23799473)
chr6 (76-139)||(3299139-3299202)
chr6 (373-434)||(6707821-6707883)
chr6 (76-181)||(7254928-7255034)
chr6 (84-138)||(13061363-13061417)
chr6 (78-132)||(19128153-19128207)
chr6 (85-139)||(31741213-31741267)
chr6 (360-428)||(32018358-32018427)
chr6 (434-480)||(3212893-3212939)
chr6 (359-401)||(13061189-13061231)
chr6 (78-132)||(13607849-13607903)
chr6 (446-480)||(32018432-32018466)
chr6 (435-480)||(3299362-3299407)
chr6 (436-480)||(11105613-11105657)
[»] chr2 (70 HSPs)
chr2 (75-480)||(7807079-7807495)
chr2 (305-480)||(40308060-40308235)
chr2 (305-480)||(22484988-22485163)
chr2 (75-266)||(7876711-7876913)
chr2 (305-480)||(6496896-6497069)
chr2 (72-267)||(33324812-33325018)
chr2 (73-264)||(40308818-40309020)
chr2 (75-267)||(38602240-38602443)
chr2 (310-480)||(4169745-4169914)
chr2 (305-480)||(6124886-6125067)
chr2 (75-306)||(16561797-16562041)
chr2 (75-267)||(6124170-6124378)
chr2 (75-264)||(18300969-18301169)
chr2 (78-264)||(22570937-22571135)
chr2 (359-480)||(12819576-12819696)
chr2 (373-480)||(20537114-20537222)
chr2 (75-181)||(20536772-20536879)
chr2 (359-480)||(5371336-5371456)
chr2 (75-181)||(4170506-4170623)
chr2 (76-181)||(6497653-6497769)
chr2 (78-181)||(22484267-22484381)
chr2 (78-181)||(3563851-3563954)
chr2 (75-139)||(28746709-28746773)
chr2 (359-480)||(18301356-18301469)
chr2 (76-181)||(45159312-45159418)
chr2 (222-267)||(4170440-4170485)
chr2 (75-132)||(31236250-31236307)
chr2 (78-139)||(35342317-35342378)
chr2 (77-149)||(1005512-1005584)
chr2 (77-141)||(2319274-2319338)
chr2 (359-434)||(31235967-31236043)
chr2 (209-267)||(5371086-5371145)
chr2 (362-428)||(24585777-24585845)
chr2 (78-139)||(44156597-44156658)
chr2 (75-139)||(1776493-1776557)
chr2 (359-422)||(2319536-2319600)
chr2 (78-218)||(4355325-4355476)
chr2 (75-131)||(12819298-12819354)
chr2 (78-138)||(21104482-21104542)
chr2 (362-428)||(1005754-1005821)
chr2 (370-428)||(14824389-14824448)
chr2 (363-428)||(4355555-4355621)
chr2 (76-181)||(14824146-14824252)
chr2 (362-422)||(4562031-4562092)
chr2 (222-267)||(6497587-6497632)
chr2 (78-139)||(24585530-24585590)
chr2 (360-428)||(45158963-45159032)
chr2 (78-138)||(14217212-14217272)
chr2 (78-181)||(34146180-34146294)
chr2 (361-420)||(35342580-35342640)
chr2 (80-132)||(37134362-37134414)
chr2 (78-138)||(43214572-43214632)
chr2 (77-139)||(12206024-12206086)
chr2 (75-139)||(4561785-4561849)
chr2 (75-139)||(5588104-5588168)
chr2 (211-247)||(22484401-22484437)
chr2 (361-428)||(28746470-28746538)
chr2 (359-434)||(34146441-34146517)
chr2 (133-181)||(35996709-35996757)
chr2 (222-267)||(45159195-45159242)
chr2 (370-428)||(8482726-8482785)
chr2 (209-244)||(20536897-20536932)
chr2 (87-181)||(40497389-40497495)
chr2 (84-138)||(8482975-8483029)
chr2 (78-132)||(25933565-25933619)
chr2 (381-422)||(40431837-40431879)
chr2 (446-480)||(45158924-45158958)
chr2 (78-166)||(15880448-15880537)
chr2 (361-417)||(21104746-21104803)
chr2 (87-139)||(40432051-40432102)
[»] chr4 (68 HSPs)
chr4 (78-483)||(38491988-38492377)
chr4 (303-480)||(14795726-14795903)
chr4 (305-480)||(3402796-3402971)
chr4 (305-480)||(41146326-41146499)
chr4 (305-480)||(8063316-8063494)
chr4 (305-480)||(53323061-53323235)
chr4 (305-480)||(52572911-52573081)
chr4 (78-306)||(5325600-5325839)
chr4 (78-267)||(8064026-8064227)
chr4 (79-267)||(19738698-19738898)
chr4 (77-264)||(3403506-3403694)
chr4 (75-306)||(52122748-52122990)
chr4 (305-480)||(31227059-31227236)
chr4 (76-267)||(53322335-53322538)
chr4 (359-480)||(28377271-28377393)
chr4 (377-480)||(5325241-5325344)
chr4 (74-267)||(14795019-14795192)
chr4 (70-267)||(42472497-42472695)
chr4 (78-267)||(52572210-52572388)
chr4 (359-480)||(5835204-5835324)
chr4 (75-181)||(41145609-41145726)
chr4 (74-267)||(5834826-5835022)
chr4 (75-245)||(28376993-28377174)
chr4 (19-74)||(43501381-43501436)
chr4 (384-480)||(43509660-43509755)
chr4 (134-224)||(39957631-39957721)
chr4 (78-129)||(2586336-2586387)
chr4 (77-139)||(31946262-31946324)
chr4 (88-218)||(52721274-52721415)
chr4 (222-267)||(31226098-31226143)
chr4 (75-132)||(47607107-47607164)
chr4 (80-129)||(51858834-51858883)
chr4 (78-139)||(55901196-55901257)
chr4 (75-139)||(10257697-10257761)
chr4 (361-422)||(3109098-3109160)
chr4 (361-422)||(24793524-24793586)
chr4 (78-139)||(40694070-40694131)
chr4 (359-418)||(42630275-42630335)
chr4 (361-428)||(44521833-44521901)
chr4 (359-434)||(55900929-55901005)
chr4 (370-428)||(1177227-1177286)
chr4 (362-428)||(36511742-36511809)
chr4 (78-141)||(36511989-36512052)
chr4 (360-422)||(39957950-39958013)
chr4 (370-420)||(40694320-40694371)
chr4 (370-428)||(51859045-51859104)
chr4 (360-434)||(52721616-52721691)
chr4 (78-132)||(1176981-1177035)
chr4 (361-422)||(36943932-36943994)
chr4 (381-434)||(49470559-49470613)
chr4 (360-428)||(24784634-24784703)
chr4 (360-428)||(24823563-24823632)
chr4 (85-141)||(24296505-24296561)
chr4 (85-181)||(24793735-24793833)
chr4 (211-267)||(41145747-41145803)
chr4 (88-139)||(21058843-21058894)
chr4 (434-480)||(3109053-3109099)
chr4 (134-168)||(3109253-3109287)
chr4 (361-422)||(17892511-17892573)
chr4 (434-480)||(17892572-17892618)
chr4 (434-480)||(36943993-36944039)
chr4 (135-181)||(37992537-37992583)
chr4 (434-480)||(39958012-39958058)
chr4 (78-127)||(17892248-17892297)
chr4 (78-139)||(44121899-44121960)
chr4 (278-306)||(8063984-8064012)
chr4 (278-306)||(14795210-14795238)
chr4 (373-428)||(47607354-47607410)
[»] chr5 (72 HSPs)
chr5 (305-480)||(9793017-9793192)
chr5 (305-480)||(39689953-39690128)
chr5 (74-264)||(26794923-26795115)
chr5 (305-480)||(1639013-1639186)
chr5 (75-306)||(32707710-32707952)
chr5 (76-306)||(32624875-32625116)
chr5 (75-267)||(39690680-39690884)
chr5 (75-306)||(12852116-12852341)
chr5 (78-267)||(41392630-41392830)
chr5 (359-480)||(10657219-10657341)
chr5 (305-480)||(26794224-26794390)
chr5 (305-436)||(33830482-33830611)
chr5 (73-249)||(33829748-33829931)
chr5 (75-181)||(6243173-6243279)
chr5 (359-480)||(5985700-5985821)
chr5 (75-267)||(1639711-1639903)
chr5 (74-181)||(9792315-9792433)
chr5 (305-405)||(12852831-12852931)
chr5 (75-175)||(10656817-10656928)
chr5 (74-181)||(30777526-30777644)
chr5 (418-480)||(30918978-30919040)
chr5 (78-139)||(30284664-30284725)
chr5 (78-181)||(7629070-7629173)
chr5 (76-139)||(30918376-30918439)
chr5 (362-422)||(43357574-43357635)
chr5 (359-434)||(3701325-3701401)
chr5 (211-267)||(7977375-7977431)
chr5 (359-422)||(22738098-22738162)
chr5 (359-434)||(26691878-26691954)
chr5 (75-139)||(26716270-26716334)
chr5 (359-434)||(26961610-26961686)
chr5 (75-139)||(26986010-26986074)
chr5 (75-266)||(32728638-32728830)
chr5 (76-139)||(1795390-1795453)
chr5 (362-422)||(1795635-1795696)
chr5 (370-434)||(21251734-21251799)
chr5 (362-422)||(26716515-26716576)
chr5 (362-422)||(26986255-26986316)
chr5 (359-434)||(17138035-17138111)
chr5 (362-428)||(25749848-25749915)
chr5 (80-139)||(26691618-26691677)
chr5 (80-139)||(26961350-26961409)
chr5 (362-428)||(27938401-27938468)
chr5 (80-181)||(11906220-11906332)
chr5 (434-480)||(11907615-11907661)
chr5 (359-428)||(27085610-27085680)
chr5 (75-132)||(5721985-5722041)
chr5 (362-422)||(14836574-14836635)
chr5 (359-434)||(5722238-5722314)
chr5 (370-428)||(7629296-7629355)
chr5 (69-116)||(11694210-11694257)
chr5 (87-138)||(14836390-14836441)
chr5 (79-138)||(17138312-17138370)
chr5 (225-267)||(5986006-5986048)
chr5 (83-181)||(7977254-7977355)
chr5 (76-177)||(22774552-22774664)
chr5 (78-139)||(3934845-3934906)
chr5 (222-267)||(30918513-30918558)
chr5 (135-179)||(21251533-21251577)
chr5 (373-428)||(30284394-30284450)
chr5 (134-181)||(5986072-5986119)
chr5 (76-139)||(35746308-35746371)
chr5 (76-138)||(5612500-5612562)
chr5 (222-267)||(6243054-6243100)
chr5 (434-480)||(15066515-15066561)
chr5 (434-480)||(30777158-30777204)
chr5 (434-480)||(34032674-34032720)
chr5 (359-404)||(5612253-5612298)
chr5 (79-132)||(42366167-42366220)
chr5 (381-420)||(9729431-9729471)
chr5 (361-401)||(18001781-18001821)
chr5 (87-139)||(41233388-41233440)
[»] scaffold0005 (3 HSPs)
scaffold0005 (303-480)||(43828-44005)
scaffold0005 (74-267)||(44539-44712)
scaffold0005 (278-306)||(44493-44521)
[»] scaffold0640 (1 HSPs)
scaffold0640 (72-267)||(8010-8216)
[»] scaffold0060 (2 HSPs)
scaffold0060 (75-267)||(30362-30565)
scaffold0060 (418-480)||(29867-29929)
[»] scaffold0112 (2 HSPs)
scaffold0112 (78-265)||(42006-42183)
scaffold0112 (305-459)||(41330-41481)
[»] scaffold0177 (2 HSPs)
scaffold0177 (74-181)||(25545-25652)
scaffold0177 (223-267)||(25469-25513)
[»] scaffold0037 (2 HSPs)
scaffold0037 (74-267)||(27719-27903)
scaffold0037 (305-397)||(27092-27183)
[»] scaffold0250 (2 HSPs)
scaffold0250 (74-266)||(5508-5703)
scaffold0250 (359-463)||(5905-6008)
[»] scaffold0406 (2 HSPs)
scaffold0406 (75-180)||(13863-13969)
scaffold0406 (222-267)||(13997-14042)
[»] scaffold0240 (1 HSPs)
scaffold0240 (76-141)||(10598-10663)
[»] scaffold0285 (1 HSPs)
scaffold0285 (80-139)||(13252-13311)


Alignment Details
Target: chr3 (Bit Score: 272; Significance: 1e-152; HSPs: 92)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 74 - 483
Target Start/End: Complemental strand, 37996933 - 37996510
Alignment:
Q  74 gctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac-----------ttttcgatacgtatccggagagt 162  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||           ||  |||||||||||||||||||    
T  37996933 gctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgagacctgcccgatatttcccgatacgtatccggagagt 37996834  T
Q  163 atccaaatattaaattttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtgtttttt---atattatttt 259  Q
    |||||||||||||||||||       || || |||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||    
T  37996833 atccaaatattaaattttatttttttaaaaaataattatccgatactttccgatacatcccgatacgcacggatacttgtgtttttttttatattatttt 37996734  T
Q  260 gatttctgnnnnnnnnnngtgtaaaaaataagaataaaaacattataaacgttagttacttgttagtgttaactcttagtactgatgtgttcnnnnnnng 359  Q
    ||||||||          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |    
T  37996733 gatttctgttttttttttgtgtaaaaaataagaataaaaacattataaacgttagttacttgttagtgttaactcttagtactgatgtgttctttttttg 37996634  T
Q  360 gatatagtgattcttttttgaatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatgtataacactgctggtgctctttttg 459  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37996633 gatatagtgattcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatgtataacactgctggtgctctttttg 37996534  T
Q  460 gtatatattgcgtatgtaattacc 483  Q
    ||||||||||||||||||||||||    
T  37996533 gtatatattgcgtatgtaattacc 37996510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 74 - 479
Target Start/End: Original strand, 7327708 - 7328119
Alignment:
Q  74 gctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac-----------ttttcgatacgtatccggagagt 162  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||           ||  ||||||||||||||| |||    
T  7327708 gctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggatagt 7327807  T
Q  163 atccaaatattaaattttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtgtttttt---atattatttt 259  Q
    |||||||||||||||||||       || || ||||||||||||||          |||||||||||||||||||||||||||||||   ||||||||||    
T  7327808 atccaaatattaaattttatttttttaaaaaataattatccgatac----------atcccgatacgcacggatacttgtgtttttttttatattatttt 7327897  T
Q  260 gatttctgnnnnnnnnnn--gtgtaaaaaataagaataaaaacattataaacgttagttacttgttagtgttaactcttagtactgatgtgttcnnnnnn 357  Q
    ||||| ||            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          
T  7327898 gatttatgttttttttttttgtgtaaaaaataagaataaaaacattataaacgttagttacttgttagtgttaactcttagtactgatgtgttctttttt 7327997  T
Q  358 nggatatagtgattcttttttgaatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatgtataacactgctggtgctctttt 457  Q
     ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  7327998 tggatatagtgattcttttttggatcgatatagtataacactaacaagttccttttggatatagtgtagcattgatgtataacactactggtgctctttt 7328097  T
Q  458 tggtatatattgcgtatgtaat 479  Q
    ||||||||||||||||||||||    
T  7328098 tggtatatattgcgtatgtaat 7328119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 78 - 351
Target Start/End: Original strand, 1528502 - 1528779
Alignment:
Q  78 tgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgata-cttttcgatacgtatccggagagtatccaaatattaaa 176  Q
    |||||| ||||||||| ||||||||||||||| | ||||||||||||||| |||||||||| ||   |||||||||||||||||||||||||||||||||    
T  1528502 tgaagctccgatacttcaaaatggatgacgtatcatatcccctgcgtatcatgcatcgatacctgcccgatacgtatccggagagtatccaaatattaaa 1528601  T
Q  177 ttttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtgttttttatattattttgatttctg----nnnnn 272  Q
    |||||       || || ||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||             
T  1528602 ttttatttttaaaa-aaataattatccgatattttccgatatatctcgatacgcacggatacttgtgttttttatattattttgatttctgttttttttt 1528700  T
Q  273 nnnnngtgtaaaaaataagaataaaaacattataaacgttagttacttgttagtgttaactcttagtactgatgtgttc 351  Q
         ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||    
T  1528701 tttttgtgtaaaaaataagaataaaaacattataaacgttggttacttgttagtgttaactcttggtattgatgtgttc 1528779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 305 - 480
Target Start/End: Original strand, 48123545 - 48123720
Alignment:
Q  305 taaacgttagttacttgttagtgttaactcttagtactgatgtgttcnnnnnnnggatatagtgattcttttttgaatcgatatagtatagcactaacaa 404  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||       ||||||||||||||||||||||||||| |||||||| ||| |||||    
T  48123545 taaacgttagttacttgttagtgttaactcttagtactgatgtggtcattttttggatatagtgattcttttttgaatcgacatagtataacacaaacaa 48123644  T
Q  405 gttccttttggatatagtgtagcattgatgtataacactgctggtgctctttttggtatatattgcgtatgtaatt 480  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  48123645 gttccttttggatatagtgtagcattgatgtatagcactgatggtgctctttttggtatatattgcgtatgtaatt 48123720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 305 - 480
Target Start/End: Complemental strand, 25936475 - 25936301
Alignment:
Q  305 taaacgttagttacttgttagtgttaactcttagtactgatgtgttcnnnnnnnggatatagtgattcttttttgaatcgatatagtatagcactaacaa 404  Q
    |||||||||||||||||||||||||||||||||||||||||||||||       |||||||||| |||||||||| ||||||||||||||||||||||||    
T  25936475 taaacgttagttacttgttagtgttaactcttagtactgatgtgttctttttt-ggatatagtgcttcttttttggatcgatatagtatagcactaacaa 25936377  T
Q  405 gttccttttggatatagtgtagcattgatgtataacactgctggtgctctttttggtatatattgcgtatgtaatt 480  Q
    |||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||||    
T  25936376 gttccttttggatatagtgtagcattgatgtatagcactaatggtgctctttttggtatatattgcgtatgtaatt 25936301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 305 - 480
Target Start/End: Complemental strand, 1679078 - 1678903
Alignment:
Q  305 taaacgttagttacttgttagtgttaactcttagtactgatgtgttcnnnnnnnggatatagtgattcttttttgaatcgatatagtatagcactaacaa 404  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||| |||||||||||||| ||||||||     
T  1679078 taaacgtcagttacttgttagtgttaactcttagtactgatgtgttctttttttggatatagtgattcttttttggatcgatatagtatatcactaacag 1678979  T
Q  405 gttccttttggatatagtgtagcattgatgtataacactgctggtgctctttttggtatatattgcgtatgtaatt 480  Q
    |||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  1678978 gttcattttgaatatagtgtagcattgatgtataacactgatggtgctctttttggtatatattgcgtatgtaatt 1678903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 305 - 480
Target Start/End: Complemental strand, 52505221 - 52505046
Alignment:
Q  305 taaacgttagttacttgttagtgttaactcttagtactgatgtgttcnnnnnnnggatatagtgattcttttttgaatcgatatagtatagcactaacaa 404  Q
    |||||||||||||||||||||||||||||||||||||||||||||||       ||||||| ||||||||||||| |||||||||||||| |||||||||    
T  52505221 taaacgttagttacttgttagtgttaactcttagtactgatgtgttctttttttggatataatgattcttttttggatcgatatagtataacactaacaa 52505122  T
Q  405 gttccttttggatatagtgtagcattgatgtataacactgctggtgctctttttggtatatattgcgtatgtaatt 480  Q
    |||||||||||||||||||||||||||||||||| ||||  ||||||||||||| |||||||||||||||||||||    
T  52505121 gttccttttggatatagtgtagcattgatgtatagcactaatggtgctctttttagtatatattgcgtatgtaatt 52505046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 74 - 264
Target Start/End: Complemental strand, 10225273 - 10225081
Alignment:
Q  74 gctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatacttttcgatacgtatccggagagtatccaaatatt 173  Q
    |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  10225273 gctgtgaagccctgatactttaaaatggatgacgtatcgtatcccctgcgtatcctgcaccgatactttccgatacgtatccggagagtatccaaatatt 10225174  T
Q  174 aaattttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtg--ttttttatattattttgattt 264  Q
    ||||||||       || || ||||||||||||||||| |||||||| ||||||||||||||||||||||  |||||||||||||||| ||||    
T  10225173 aaattttattttttaaaaaaataattatccgatacttttcgatacataccgatacgcacggatacttgtgttttttttatattatttttattt 10225081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 305 - 480
Target Start/End: Complemental strand, 22610673 - 22610500
Alignment:
Q  305 taaacgttagttacttgttagtgttaactcttagtactgatgtgttcnnnnnnnggatatagtgattcttttttgaatcgatatagtatagcactaacaa 404  Q
    |||||||||||||||||||||||||||||||||||||||||||||||       |||||||||| |||||||||| ||||||||||||||||||||||||    
T  22610673 taaacgttagttacttgttagtgttaactcttagtactgatgtgttctttttt-ggatatagtgcttcttttttggatcgatatagtatagcactaacaa 22610575  T
Q  405 gttccttttggatatagtgtagcattgatgtataacactgctggtgctctttttggtatatattgcgtatgtaatt 480  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||| |||||||||||    
T  22610574 gttccttttggatatagtgtagcattgatgtataacactgatagtgctcttttt-gtatatatttcgtatgtaatt 22610500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 75 - 267
Target Start/End: Complemental strand, 22611495 - 22611302
Alignment:
Q  75 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgata-cttttcgatacgtatccggagagtatccaaatatt 173  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| ||||| ||   ||||||||||||||||||||||||||||||    
T  22611495 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtttcctgcaccgatacctgcccgatacgtatccggagagtatccaaatatt 22611396  T
Q  174 aaattttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtgttttttatattattttgatttctg 267  Q
    ||||||||       || || |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  22611395 aaattttattttttaaaaaaataattatccgatactttccgatacgtcccgatacgcacggatacttgtattttttatatttttttgatttctg 22611302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 75 - 267
Target Start/End: Original strand, 40497327 - 40497531
Alignment:
Q  75 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatactt---------ttc--gatacgtatccggagagta 163  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||         |||  |||||||||||||||||||    
T  40497327 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacttgcccgatacttcccgatacgtatccggagagta 40497426  T
Q  164 tccaaatattaaattttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtg-ttttttatattattttgat 262  Q
    ||||||||||||||||||       || || ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  40497427 tccaaatattaaattttatttttaaaaaaaataattatccgatactttccgatacatcccgatacgcacggatacttgtgtttttttatattattttgat 40497526  T
Q  263 ttctg 267  Q
    |||||    
T  40497527 ttctg 40497531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 305 - 480
Target Start/End: Complemental strand, 45532459 - 45532286
Alignment:
Q  305 taaacgttagttacttgttagtgttaactcttagtactgatgtgttcnnnnnnnggatatagtgattcttttttgaatcgatatagtatagcactaacaa 404  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||       |||||||||| |||||||||| || |||||| ||||||||||||||    
T  45532459 taaatgttagttacttgttagtgttaactcttagtactgatgtgttctttttt-ggatatagtgcttcttttttggattgatataatatagcactaacaa 45532361  T
Q  405 gttccttttggatatagtgtagcattgatgtataacactgctggtgctctttttggtatatattgcgtatgtaatt 480  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||    
T  45532360 gttccttttggatatagtgtagcattgatgtatagcactgatggtgctcttttt-gtatatattgcgtatgtaatt 45532286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 75 - 306
Target Start/End: Original strand, 28704724 - 28704968
Alignment:
Q  75 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcat-----------cgatacttttcgatacgtatccggagagta 163  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||            ||||||||| | ||| ||||||||||||||    
T  28704724 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcatatcctgcactgatacctatccgatactttccaatatgtatccggagagta 28704823  T
Q  164 tccaaatattaaattttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtgttttttatattattttgatt 263  Q
    || |||||||||||||||       || || |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28704824 tcaaaatattaaattttatttttttaaaaaataattatccgatactttctgatacatcccgatacgcacggatacttgtgttttttatattattttgatt 28704923  T
Q  264 tctgnnnnnnnnnn--gtgtaaaaaataagaataaaaacattata 306  Q
    ||||            |||||||||||||||||||||||||||||    
T  28704924 tctgttttttttttttgtgtaaaaaataagaataaaaacattata 28704968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 305 - 480
Target Start/End: Original strand, 28705458 - 28705636
Alignment:
Q  305 taaacgttagttacttgttagtgttaactc---ttagtactgatgtgttcnnnnnnnggatatagtgattcttttttgaatcgatatagtatagcactaa 401  Q
    ||||||| |||||||||||||||||||||    ||||||| |||||||||       | ||||||||||||||||||| |||||||||| ||| ||||||    
T  28705458 taaacgtcagttacttgttagtgttaactacttttagtacggatgtgttctttttttgaatatagtgattcttttttggatcgatatagaatatcactaa 28705557  T
Q  402 caagttccttttggatatagtgtagcattgatgtataacactgctggtgctctttttggtatatattgcgtatgtaatt 480  Q
    ||||||| |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| |||||||||    
T  28705558 caagttcattttggatatagtgtagcattgatgtataacattgatggtgctctttttggtatatattgcatatgtaatt 28705636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 74 - 267
Target Start/End: Complemental strand, 52505954 - 52505751
Alignment:
Q  74 gctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac-----------ttttcgatacgtatccggagagt 162  Q
    |||||||||||||||||||| ||||||||||| |||| ||||||| ||||||||||||| ||||||           ||  ||||||||||||| |||||    
T  52505954 gctgtgaagccccgatacttaaaaatggatgatgtactgtatccc-tgcgtatcctgcaccgataccggcccgatatttcccgatacgtatccgaagagt 52505856  T
Q  163 atccaaatattaaattttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtgttttttatattattttgat 262  Q
    |||||||||||||||||||       || || ||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  52505855 atccaaatattaaattttatttttcaaaaaaataattatccgatacttttcgatacatcccgatacacacggatacttgtgttttttatattattttgat 52505756  T
Q  263 ttctg 267  Q
    |||||    
T  52505755 ttctg 52505751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 359 - 484
Target Start/End: Original strand, 1528808 - 1528929
Alignment:
Q  359 ggatatagtgattcttttttgaatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatgtataacactgctggtgctcttttt 458  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    ||||||||||||||||| |||||||||||||||||||||||    
T  1528808 ggatatagtgattcttttttggatcgatatagtatagcactaacaagttcatttt----atagtgtagcattgatgcataacactgctggtgctcttttt 1528903  T
Q  459 ggtatatattgcgtatgtaattacct 484  Q
    ||||||||||| ||||||||||||||    
T  1528904 ggtatatattgtgtatgtaattacct 1528929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 75 - 267
Target Start/End: Complemental strand, 25937184 - 25936979
Alignment:
Q  75 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatc-----------gatacttttcgatacgtatccggagagta 163  Q
    ||||||||||| ||||||||||||||||||||||| |||||| |||||||||||| || |           |||||||| ||||||||||| ||||||||    
T  25937184 ctgtgaagccc-gatactttaaaatggatgacgtatcgtatctcctgcgtatcctacaccaatacatgcccgatactttccgatacgtatctggagagta 25937086  T
Q  164 tccaaatattaaattttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtgtt---ttttatattattttg 260  Q
    || |||||||||||||||       || || |||||||||||||||||| ||||||||||||||||||||||||||||||||   |||||||||||||||    
T  25937085 tctaaatattaaattttatttttaaaaaaattaattatccgatactttctgatacatcccgatacgcacggatacttgtgtttttttttatattattttg 25936986  T
Q  261 atttctg 267  Q
    |||||||    
T  25936985 atttctg 25936979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 305 - 480
Target Start/End: Complemental strand, 10224548 - 10224382
Alignment:
Q  305 taaacgttagttacttgttagtgttaactcttagtactgatgtgttcnnnnnnnggatatagtgattcttttttgaatcgatatagtatagcactaacaa 404  Q
    |||||||||||||||||||||||||||||||||||         |||       ||||||||||||||||||||| |||||| ||||||| |||||||||    
T  10224548 taaacgttagttacttgttagtgttaactcttagt---------ttctttttttggatatagtgattcttttttggatcgatttagtataacactaacaa 10224458  T
Q  405 gttccttttggatatagtgtagcattgatgtataacactgctggtgctctttttggtatatattgcgtatgtaatt 480  Q
    |||||||||||||||| |||||||||||||| ||   ||| || ||||||||||||||||||||||||||||||||    
T  10224457 gttccttttggatataatgtagcattgatgtttattcctgatgatgctctttttggtatatattgcgtatgtaatt 10224382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 75 - 225
Target Start/End: Complemental strand, 2567508 - 2567358
Alignment:
Q  75 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatacttttcgatacgtatccggagagtatccaaatatta 174  Q
    |||||||  |||||||||| ||||||||||||||| |||||  ||||||||||||||| ||||||||  |||||||||||| |||||||||| |||||||    
T  2567508 ctgtgaaatcccgatacttcaaaatggatgacgtatcgtatttcctgcgtatcctgcaccgatacttcccgatacgtatccagagagtatccgaatatta 2567409  T
Q  175 aattttannnnnnnaagaactaattatccgatactttccgatacatcccga 225  Q
    |||||||       || || |||||||||||||||||||||||||||||||    
T  2567408 aattttattttttaaaaaaataattatccgatactttccgatacatcccga 2567358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 359 - 480
Target Start/End: Original strand, 22311104 - 22311224
Alignment:
Q  359 ggatatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatgtataacactgctggtgctctttt 457  Q
    |||||||||| |||||||||| ||||||||||||||||| |||||| |||||||||||||||||| || ||||||  |||||||||| ||||||||||||    
T  22311104 ggatatagtgcttcttttttggatcgatatagtatagcattaacaatgttccttttggatatagtataacattga--tataacactgatggtgctctttt 22311201  T
Q  458 tggtatatattgcgtatgtaatt 480  Q
    |||||||| ||| ||||||||||    
T  22311202 tggtatatcttgtgtatgtaatt 22311224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 78 - 181
Target Start/End: Original strand, 53192498 - 53192602
Alignment:
Q  78 tgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgata-cttttcgatacgtatccggagagtatccaaatattaaa 176  Q
    |||||||||||||||| ||||||||||||||||||||| ||||| |||||||||| ||||| ||   |||||||||||||||||||||||||||||||||    
T  53192498 tgaagccccgatacttcaaaatggatgacgtaccgtataccctgagtatcctgcaccgatacctgcccgatacgtatccggagagtatccaaatattaaa 53192597  T
Q  177 tttta 181  Q
    |||||    
T  53192598 tttta 53192602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 76 - 264
Target Start/End: Original strand, 35389748 - 35389938
Alignment:
Q  76 tgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgca-----------tcgatacttttcgatacgtatccggagagtat 164  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||            ||||||||  ||||||||||| |||||||||    
T  35389748 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatcgggagagtat 35389847  T
Q  165 ccaaatattaaattttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtg-ttttttatattattttgatt 263  Q
    |||||||||||||||||       |||||  ||| ||       ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  35389848 ccaaatattaaatttta-ttttttaagaa--aataat-------tttccgatacatcccgatacgcacggatacttgtgtttttttatattattttgatt 35389937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 359 - 480
Target Start/End: Complemental strand, 50287090 - 50286970
Alignment:
Q  359 ggatatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatgtataacactgctggtgctctttt 457  Q
    |||||||||| |||||||||| |||||||||||||||||  || || |||||||||||||||||| || |||||||  ||||||||| ||||||||||||    
T  50287090 ggatatagtgtttcttttttggatcgatatagtatagcatcaataatgttccttttggatatagtataacattgat--ataacactgatggtgctctttt 50286993  T
Q  458 tggtatatattgcgtatgtaatt 480  Q
    |||||||| ||||||||||||||    
T  50286992 tggtatattttgcgtatgtaatt 50286970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 74 - 264
Target Start/End: Original strand, 52121176 - 52121367
Alignment:
Q  74 gctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgca-----------tcgatacttttcgatacgtatccggagagt 162  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||            |||||||| |||||||||||| |||||||    
T  52121176 gctgtgaagccccgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcactaatacctgtccgatacttctcgatacgtatcgggagagt 52121275  T
Q  163 atccaaatattaaattttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtgttttttatattattttgat 262  Q
    |||||||||||||||||||       || || ||||| | |||||||||| ||||||          |||||||||||||||||||||||||||||||||    
T  52121276 atccaaatattaaattttattttttaaaaaaataatttttcgatactttctgataca----------cacggatacttgtgttttttatattattttgat 52121365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 75 - 267
Target Start/End: Complemental strand, 1679819 - 1679625
Alignment:
Q  75 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac-----------ttttcgatacgtatccggagagta 163  Q
    ||||||||||||||||||| ||||||||| ||||||||||||| |||| ||||||||| ||||||           ||  ||||||||||||||||||||    
T  1679819 ctgtgaagccccgatacttcaaaatggataacgtaccgtatccactgcatatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagta 1679720  T
Q  164 tccaaatattaaattttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtgtt-ttttatattattttgat 262  Q
    ||||||||||||||||||       || || ||||||||||||||          ||||||||||||||||||||||||||| |||||||||||||||||    
T  1679719 tccaaatattaaattttatttttaaaaaaaataattatccgatac----------atcccgatacgcacggatacttgtgtttttttatattattttgat 1679630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 73 - 218
Target Start/End: Complemental strand, 55269135 - 55268983
Alignment:
Q  73 ggctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcg-------atacttttcgatacgtatccggagagtatc 165  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||       ||||||  ||||||||||| ||||||||||    
T  55269135 ggctgtgaagccccgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcatcgatacctgatacttcccgatacgtatcaggagagtatc 55269036  T
Q  166 caaatattaaattttannnnnnnaagaactaattatccgatactttccgatac 218  Q
    | || |||||||||||       || || |||||||||||||||| |||||||    
T  55269035 cgaagattaaattttatttttttaaaaaataattatccgatacttcccgatac 55268983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 359 - 480
Target Start/End: Complemental strand, 28882423 - 28882303
Alignment:
Q  359 ggatatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatgtataacactgctggtgctctttt 457  Q
    |||||||||| ||||||||   ||||||||||||||||| |||||| ||| |||||||||||||| || |||||||  ||||||||| ||||||||||||    
T  28882423 ggatatagtgcttctttttatgatcgatatagtatagcattaacaatgtttcttttggatatagtataacattgat--ataacactgatggtgctctttt 28882326  T
Q  458 tggtatatattgcgtatgtaatt 480  Q
    |||||||| ||||||||||||||    
T  28882325 tggtatattttgcgtatgtaatt 28882303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 359 - 480
Target Start/End: Original strand, 52121536 - 52121658
Alignment:
Q  359 ggatatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatgtataacactgctggtgctctttt 457  Q
    |||||||||| |  ||||||| ||||||||| |||||||||||||| ||||||||||||| |||| ||  |||||||||||||| || ||||||||||||    
T  52121536 ggatatagtgctctttttttggatcgatataatatagcactaacaatgttccttttggatgtagtataatattgatgtataacagtgatggtgctctttt 52121635  T
Q  458 tggtatatattgcgtatgtaatt 480  Q
    || ||||| ||||||||||||||    
T  52121636 tgatatattttgcgtatgtaatt 52121658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 76 - 267
Target Start/End: Original strand, 22310703 - 22310908
Alignment:
Q  76 tgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatc-----------gatacttttcgatacgtatccggagagtat 164  Q
    |||||||||||||||||| | ||||||||||||||||||||||||| |||||||||| |           |||||||  |||||||||||   |||||||    
T  22310703 tgtgaagccccgatacttcacaatggatgacgtaccgtatcccctgtgtatcctgcaccgatacctgcctgatacttcccgatacgtatcgatagagtat 22310802  T
Q  165 ccaaatattaaattttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtgtttttt---atattattttga 261  Q
    | |||||||||||||||       |  || ||||| |||||||||||| ||||| ||| |||||| |||||||||||||||||||   ||||||||||||    
T  22310803 caaaatattaaattttattttttaagaaaataattttccgatactttctgatacgtcctgatacgtacggatacttgtgttttttttaatattattttga 22310902  T
Q  262 tttctg 267  Q
    ||||||    
T  22310903 tttctg 22310908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 78 - 181
Target Start/End: Original strand, 47642017 - 47642120
Alignment:
Q  78 tgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatacttttcgatacgtatccggagagtatccaaatattaaat 177  Q
    ||||||| |||||||| |||||||||||||||||||||||| ||||||||||||| ||||||||  | ||||||||| | ||||||||| || |||||||    
T  47642017 tgaagcctcgatacttcaaaatggatgacgtaccgtatcccatgcgtatcctgcaccgatacttcccaatacgtatcagaagagtatccgaagattaaat 47642116  T
Q  178 ttta 181  Q
    ||||    
T  47642117 ttta 47642120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 77 - 181
Target Start/End: Complemental strand, 28882797 - 28882682
Alignment:
Q  77 gtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgca-----------tcgatacttttcgatacgtatccggagagtatc 165  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||            ||||||||| ||||||||||| ||||||||||    
T  28882797 gtgaagctccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcatgcaccgatatatgcccgatactttccgatacgtatcgggagagtatc 28882698  T
Q  166 caaatattaaatttta 181  Q
    ||||||||||||||||    
T  28882697 caaatattaaatttta 28882682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 359 - 480
Target Start/End: Original strand, 35390124 - 35390241
Alignment:
Q  359 ggatatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatgtataacactgctggtgctctttt 457  Q
    |||||||||| |||||||||| |||||||||||||| || |||||| |||||||||||||||||| || ||||||  ||| |||   |||||||||||||    
T  35390124 ggatatagtgcttcttttttggatcgatatagtataacattaacaatgttccttttggatatagtataacattga--tatgaca---ctggtgctctttt 35390218  T
Q  458 tggtatatattgcgtatgtaatt 480  Q
    |||||||| || |||||||||||    
T  35390219 tggtatattttacgtatgtaatt 35390241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 78 - 181
Target Start/End: Original strand, 48122825 - 48122939
Alignment:
Q  78 tgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac-----------ttttcgatacgtatccggagagtatcc 166  Q
    |||||||||||||||| |||||||||||||||||||||||||||| ||||||||| ||||||           ||  |||||||||||| ||||||||||    
T  48122825 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcatatcctgcaccgatacatgcccgatatttcccgatacgtatccagagagtatcc 48122924  T
Q  167 aaatattaaatttta 181  Q
    |||||||||||||||    
T  48122925 aaatattaaatttta 48122939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 76 - 218
Target Start/End: Complemental strand, 19879213 - 19879070
Alignment:
Q  76 tgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgata-cttttcgatacgtatccggagagtatccaaatatta 174  Q
    ||||||||| | |||||| |||||||||||||||||||||||||||||||||||||| ||||| ||   ||||| ||||  ||||||||||| || |||     
T  19879213 tgtgaagccgcaatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatatgtataaggagagtatccgaagattc 19879114  T
Q  175 aattttannnnnnnaagaactaattatccgatactttccgatac 218  Q
    |||||||       || || |||||||||||||||| |||||||    
T  19879113 aattttattttttaaaaaaataattatccgatacttcccgatac 19879070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 418 - 480
Target Start/End: Complemental strand, 42464425 - 42464363
Alignment:
Q  418 atagtgtagcattgatgtataacactgctggtgctctttttggtatatattgcgtatgtaatt 480  Q
    |||||||||||||| |||||||||||| || ||||||||||||||||||||||||||||||||    
T  42464425 atagtgtagcattgttgtataacactgatgatgctctttttggtatatattgcgtatgtaatt 42464363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 77 - 132
Target Start/End: Original strand, 19420904 - 19420959
Alignment:
Q  77 gtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgca 132  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  19420904 gtgaagccccgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgca 19420959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 76 - 139
Target Start/End: Complemental strand, 42465027 - 42464964
Alignment:
Q  76 tgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac 139  Q
    |||||||||||||||||| |||||||||||||||| |||||| |||||||||||||| ||||||    
T  42465027 tgtgaagccccgatacttcaaaatggatgacgtactgtatcctctgcgtatcctgcaccgatac 42464964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 78 - 139
Target Start/End: Complemental strand, 6134500 - 6134439
Alignment:
Q  78 tgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac 139  Q
    |||||||| ||||||| ||||||||||||||| |||||||||||||||||||||| ||||||    
T  6134500 tgaagccctgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcaccgatac 6134439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 134 - 267
Target Start/End: Complemental strand, 45533031 - 45532908
Alignment:
Q  134 cgatacttttcgatacgtatccggagagtatccaaatattaaattttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacg 233  Q
    ||||||||  ||||||||||||| ||||||||||||||||||||||||       || || |||||||||||||| |          | |||||||||||    
T  45533031 cgatacttcccgatacgtatccgaagagtatccaaatattaaattttatttttaaaaaaaataattatccgatacgt----------ctcgatacgcacg 45532942  T
Q  234 gatacttgtgttttttatattattttgatttctg 267  Q
    |||||||||||| |||||||||||||||||||||    
T  45532941 gatacttgtgttctttatattattttgatttctg 45532908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 359 - 422
Target Start/End: Complemental strand, 30787418 - 30787354
Alignment:
Q  359 ggatatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagt 422  Q
    |||||||||| |||||||||| |||||||||||||||||||||||| ||||||||| ||||||||    
T  30787418 ggatatagtgcttcttttttggatcgatatagtatagcactaacaatgttccttttagatatagt 30787354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 75 - 130
Target Start/End: Complemental strand, 30787683 - 30787628
Alignment:
Q  75 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctg 130  Q
    ||||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||    
T  30787683 ctgtgaagccccgatacttcaaaatcgatgacgtatcgtatcccctgcgtatcctg 30787628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 76 - 181
Target Start/End: Complemental strand, 21006605 - 21006499
Alignment:
Q  76 tgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgata-cttttcgatacgtatccggagagtatccaaatatta 174  Q
    |||||||||||||||||| |||||| |||||||| | |||| | |||||||| |||||||||| ||   ||| |||||| |||||||||||| |||||||    
T  21006605 tgtgaagccccgatacttcaaaatgaatgacgtatcatatctcatgcgtatcttgcatcgatacctgcccgacacgtattcggagagtatccgaatatta 21006506  T
Q  175 aatttta 181  Q
    || ||||    
T  21006505 aaattta 21006499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 78 - 132
Target Start/End: Complemental strand, 22289839 - 22289785
Alignment:
Q  78 tgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgca 132  Q
    ||||||| |||||||| ||||||||||||||| ||||||||||||||||||||||    
T  22289839 tgaagcctcgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgca 22289785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 78 - 139
Target Start/End: Complemental strand, 13748565 - 13748504
Alignment:
Q  78 tgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac 139  Q
    |||||||||||||||| ||||||| ||||||| ||||||| |||||||||||||| ||||||    
T  13748565 tgaagccccgatacttcaaaatggttgacgtatcgtatcctctgcgtatcctgcaccgatac 13748504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 370 - 422
Target Start/End: Original strand, 42229914 - 42229967
Alignment:
Q  370 ttcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagt 422  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  42229914 ttcttttttgaatcgatatagtatagcactaacaatattccttttggatatagt 42229967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 359 - 434
Target Start/End: Complemental strand, 20510013 - 20509937
Alignment:
Q  359 ggatatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatg 434  Q
    |||||||||| |||||||||| ||||| |||||||| ||||||||| |||| ||||||||||||| || ||||||||    
T  20510013 ggatatagtgcttcttttttggatcgacatagtataacactaacaatgttcattttggatatagtatatcattgatg 20509937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 360 - 422
Target Start/End: Complemental strand, 13353051 - 13352988
Alignment:
Q  360 gatatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagt 422  Q
    ||||||||| |||||||||| ||||| | |||||||||||||||| ||||||||||||||||||    
T  13353051 gatatagtgcttcttttttggatcgacacagtatagcactaacaatgttccttttggatatagt 13352988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 76 - 139
Target Start/End: Original strand, 29915859 - 29915922
Alignment:
Q  76 tgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac 139  Q
    ||||||| |||||||||| ||||| ||||||||| ||||||||||||||||| |||| ||||||    
T  29915859 tgtgaagtcccgatacttcaaaatagatgacgtatcgtatcccctgcgtatcatgcaccgatac 29915922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 76 - 139
Target Start/End: Original strand, 29965012 - 29965075
Alignment:
Q  76 tgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac 139  Q
    ||||||| |||||||||| ||||| ||||||||| ||||||||||||||||| |||| ||||||    
T  29965012 tgtgaagtcccgatacttcaaaatagatgacgtatcgtatcccctgcgtatcatgcaccgatac 29965075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 88 - 139
Target Start/End: Original strand, 49419245 - 49419296
Alignment:
Q  88 atactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac 139  Q
    |||||| ||||||||||||||| |||||||| ||||||||||||||||||||    
T  49419245 atacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcatcgatac 49419296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 359 - 420
Target Start/End: Original strand, 19421677 - 19421739
Alignment:
Q  359 ggatatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatata 420  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||| ||||||| || |||||    
T  19421677 ggatatagtgcttcttttttgaatcgatatagtataacactaacaatgttccttatgaatata 19421739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 212 - 267
Target Start/End: Original strand, 33240085 - 33240142
Alignment:
Q  212 ccgatacatcccgatacgcacggatacttgtg--ttttttatattattttgatttctg 267  Q
    ||||||| |||| |||||||||||||||||||  ||||||||||||||||||||||||    
T  33240085 ccgatacgtcccaatacgcacggatacttgtgttttttttatattattttgatttctg 33240142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 369 - 422
Target Start/End: Original strand, 48334154 - 48334208
Alignment:
Q  369 attcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagt 422  Q
    ||||||||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  48334154 attcttttttggatcgatatagtatagcactaacaatgttctttttggatatagt 48334208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 86 - 131
Target Start/End: Complemental strand, 13353296 - 13353251
Alignment:
Q  86 cgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgc 131  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||    
T  13353296 cgatactttaaaatggatgacgtatcgtatctcctgcgtatcctgc 13353251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 362 - 422
Target Start/End: Complemental strand, 19349480 - 19349419
Alignment:
Q  362 tatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagt 422  Q
    ||||||| |||||||||| ||||||||||||||||||| |||| ||| ||||||||||||||    
T  19349480 tatagtgcttcttttttggatcgatatagtatagcactgacaatgtttcttttggatatagt 19349419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 222 - 267
Target Start/End: Complemental strand, 42464890 - 42464845
Alignment:
Q  222 ccgatacgcacggatacttgtgttttttatattattttgatttctg 267  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||    
T  42464890 ccgatacgcacggatacttgtattttttatattatttttatttctg 42464845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 370 - 422
Target Start/End: Original strand, 48333212 - 48333265
Alignment:
Q  370 ttcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagt 422  Q
    |||||||||| ||||||||||||||||||||||||  |||||||||||||||||    
T  48333212 ttcttttttggatcgatatagtatagcactaacaatattccttttggatatagt 48333265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 77 - 218
Target Start/End: Original strand, 52684200 - 52684352
Alignment:
Q  77 gtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgca-----------tcgatacttttcgatacgtatccggagagtatc 165  Q
    ||||||| ||||||||| ||||| ||||||||| |||||| | |||||||||||||            ||||||||| ||||||||||  ||||||||||    
T  52684200 gtgaagctccgatacttcaaaatagatgacgtatcgtatctcatgcgtatcctgcaccgatacctgtccgatactttccgatacgtattaggagagtatc 52684299  T
Q  166 caaatattaaattttannnnnnnaagaactaattatccgatactttccgatac 218  Q
    | ||||||||||||||       || || ||||||||||||| ||||||||||    
T  52684300 cgaatattaaattttatttttaaaaaaaataattatccgatattttccgatac 52684352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 360 - 480
Target Start/End: Original strand, 52684589 - 52684697
Alignment:
Q  360 gatatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatgtataacactgctggtgctcttttt 458  Q
    ||||||||| |||||||||  |||||||||||||| ||||||||| |||| |||||||||||             ||||||||| | |||||||||||||    
T  52684589 gatatagtgcttcttttttagatcgatatagtataacactaacaatgttctttttggatata-------------gtataacaccgatggtgctcttttt 52684675  T
Q  459 ggtatatattgcgtatgtaatt 480  Q
    ||||||||||| ||||||||||    
T  52684676 ggtatatattgtgtatgtaatt 52684697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 79 - 139
Target Start/End: Original strand, 28968511 - 28968571
Alignment:
Q  79 gaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac 139  Q
    ||||||||||||||| ||||||||||||||||| |||||  | ||||||||||| ||||||    
T  28968511 gaagccccgatacttcaaaatggatgacgtaccatatcctttacgtatcctgcaccgatac 28968571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 75 - 139
Target Start/End: Complemental strand, 41742193 - 41742129
Alignment:
Q  75 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac 139  Q
    ||||||||| ||||||||| |||||||||||||||  |||||| ||| |||||||||| ||||||    
T  41742193 ctgtgaagcgccgatacttcaaaatggatgacgtattgtatcctctgtgtatcctgcaccgatac 41742129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 75 - 114
Target Start/End: Original strand, 33238720 - 33238759
Alignment:
Q  75 ctgtgaagccccgatactttaaaatggatgacgtaccgta 114  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  33238720 ctgtgaagccccgatacttcaaaatggatgacgtaccgta 33238759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 134 - 181
Target Start/End: Original strand, 45347364 - 45347411
Alignment:
Q  134 cgatacttttcgatacgtatccggagagtatccaaatattaaatttta 181  Q
    ||||||||||||||||||||||| ||||||||| || |||||||||||    
T  45347364 cgatacttttcgatacgtatccgaagagtatccgaagattaaatttta 45347411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 222 - 261
Target Start/End: Original strand, 48122960 - 48122999
Alignment:
Q  222 ccgatacgcacggatacttgtgttttttatattattttga 261  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  48122960 ccgatacgcacgaatacttgtgttttttatattattttga 48122999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 76 - 141
Target Start/End: Original strand, 2122702 - 2122770
Alignment:
Q  76 tgtgaagccccgatactttaaaatggatgacgtaccgtatcc---cctgcgtatcctgcatcgatactt 141  Q
    |||||||||||||||||| |||||||||||||||  ||||||   |||||||||| |||| ||||||||    
T  2122702 tgtgaagccccgatacttcaaaatggatgacgtattgtatcccctcctgcgtatcatgcaccgatactt 2122770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 88 - 181
Target Start/End: Original strand, 5271489 - 5271583
Alignment:
Q  88 atactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgata-cttttcgatacgtatccggagagtatccaaatattaaatttta 181  Q
    |||||| ||||| |||||| ||| ||||||| ||||||||||| | ||||| |||  ||||||||||| |||||||||||  | |||||||||||    
T  5271489 atacttcaaaatagatgacatactgtatcccttgcgtatcctgaaccgataccttcccgatacgtatcaggagagtatccggagattaaatttta 5271583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 434 - 480
Target Start/End: Complemental strand, 7899513 - 7899467
Alignment:
Q  434 gtataacactgctggtgctctttttggtatatattgcgtatgtaatt 480  Q
    ||||||||||| ||||||||||||||| |||||||| ||||||||||    
T  7899513 gtataacactgatggtgctctttttgggatatattgtgtatgtaatt 7899467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 361 - 434
Target Start/End: Original strand, 28968774 - 28968848
Alignment:
Q  361 atatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatg 434  Q
    |||||||| |||||||||  ||||||||| |||| ||||||||| |||| ||||||||||||| || ||||||||    
T  28968774 atatagtgtttcttttttagatcgatataatataacactaacaatgttcattttggatatagtataacattgatg 28968848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 361 - 434
Target Start/End: Original strand, 47642269 - 47642343
Alignment:
Q  361 atatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatg 434  Q
    |||||| | |||||||||  |||||||||||||| ||||||||| |||| ||||||||||||| || ||||||||    
T  47642269 atatagcgtttcttttttagatcgatatagtataacactaacaatgttctttttggatatagtataacattgatg 47642343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 222 - 267
Target Start/End: Original strand, 52684386 - 52684432
Alignment:
Q  222 ccgatacgcacggatacttgtg-ttttttatattattttgatttctg 267  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||    
T  52684386 ccgatacgcacggatacgtgtgtttttttatattattttgatttctg 52684432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 360 - 428
Target Start/End: Complemental strand, 21006219 - 21006150
Alignment:
Q  360 gatatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagtgtagca 428  Q
    |||||| || |||||||||  |||||||||||||| ||||||||| |||| ||||||||||||| |||||    
T  21006219 gatataatgcttcttttttagatcgatatagtataacactaacaatgttctttttggatatagtatagca 21006150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 362 - 422
Target Start/End: Complemental strand, 22289597 - 22289536
Alignment:
Q  362 tatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagt 422  Q
    ||||||| |||||||||| |||||||||||| | ||||||||| ||| ||||||||||||||    
T  22289597 tatagtgcttcttttttggatcgatatagtacaacactaacaatgtttcttttggatatagt 22289536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 78 - 139
Target Start/End: Original strand, 30226420 - 30226481
Alignment:
Q  78 tgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac 139  Q
    ||||||||  |||||| |||||||||||| || ||||||| |||||||||||||| ||||||    
T  30226420 tgaagcccatatacttcaaaatggatgacttatcgtatcctctgcgtatcctgcaccgatac 30226481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 381 - 428
Target Start/End: Original strand, 25701046 - 25701094
Alignment:
Q  381 atcgatatagtatagcactaacaa-gttccttttggatatagtgtagca 428  Q
    |||||||||||||| ||||||||| |||||||||||||||||| |||||    
T  25701046 atcgatatagtataacactaacaatgttccttttggatatagtatagca 25701094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 264
Target Start/End: Complemental strand, 28882651 - 28882608
Alignment:
Q  222 ccgatacgcacggatacttgtgtt-ttttatattattttgattt 264  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  28882651 ccgatacgcacagatacttgtgtttttttatattattttgattt 28882608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 134 - 181
Target Start/End: Original strand, 33240017 - 33240064
Alignment:
Q  134 cgatacttttcgatacgtatccggagagtatccaaatattaaatttta 181  Q
    ||||||||  ||||||||||| ||||||||||||||||||| ||||||    
T  33240017 cgatacttcccgatacgtatcgggagagtatccaaatattatatttta 33240064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 75 - 138
Target Start/End: Complemental strand, 38889200 - 38889138
Alignment:
Q  75 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgata 138  Q
    ||||||||||| ||||||| ||||||||||||||| ||||||| || || |||||||| |||||    
T  38889200 ctgtgaagccctgatacttcaaaatggatgacgtatcgtatcctctacg-atcctgcaccgata 38889138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 362 - 428
Target Start/End: Original strand, 39664657 - 39664724
Alignment:
Q  362 tatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagtgtagca 428  Q
    ||||||| |||||||||| || ||||||||||| |||| |||| ||| |||||||||||||| |||||    
T  39664657 tatagtgcttcttttttgtattgatatagtataacactgacaatgtttcttttggatatagtatagca 39664724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 76 - 139
Target Start/End: Original strand, 42229672 - 42229735
Alignment:
Q  76 tgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac 139  Q
    |||||||| || |||||| ||||| |||||||||   |||||||||||||||||||| ||||||    
T  42229672 tgtgaagctccaatacttcaaaatagatgacgtattatatcccctgcgtatcctgcaccgatac 42229735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 135 - 181
Target Start/End: Original strand, 983262 - 983308
Alignment:
Q  135 gatacttttcgatacgtatccggagagtatccaaatattaaatttta 181  Q
    |||||||  ||||||||||| |||||||||||||| |||||||||||    
T  983262 gatacttcccgatacgtatcaggagagtatccaaagattaaatttta 983308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 446 - 480
Target Start/End: Complemental strand, 2567051 - 2567017
Alignment:
Q  446 tggtgctctttttggtatatattgcgtatgtaatt 480  Q
    |||||||||||||||||||||||| ||||||||||    
T  2567051 tggtgctctttttggtatatattgtgtatgtaatt 2567017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 446 - 480
Target Start/End: Complemental strand, 21006145 - 21006111
Alignment:
Q  446 tggtgctctttttggtatatattgcgtatgtaatt 480  Q
    |||||||||||||||||||||||| ||||||||||    
T  21006145 tggtgctctttttggtatatattgtgtatgtaatt 21006111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 76 - 138
Target Start/End: Complemental strand, 21157849 - 21157787
Alignment:
Q  76 tgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgata 138  Q
    |||||||||| ||||||| ||||||||||||||| ||||| | ||| | ||||||||| ||||    
T  21157849 tgtgaagcccagatacttcaaaatggatgacgtatcgtattctctgtgcatcctgcattgata 21157787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 434 - 480
Target Start/End: Complemental strand, 45057095 - 45057049
Alignment:
Q  434 gtataacactgctggtgctctttttggtatatattgcgtatgtaatt 480  Q
    ||||| ||||||||||||||||||| | |||||||| ||||||||||    
T  45057095 gtatagcactgctggtgctctttttaggatatattgtgtatgtaatt 45057049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 88 - 141
Target Start/End: Original strand, 3983707 - 3983760
Alignment:
Q  88 atactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatactt 141  Q
    ||||||| ||||||||||||||| |||||| | | |||||||||| ||||||||    
T  3983707 atacttttaaatggatgacgtactgtatcctccgtgtatcctgcaccgatactt 3983760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 359 - 404
Target Start/End: Complemental strand, 21157585 - 21157540
Alignment:
Q  359 ggatatagtgattcttttttgaatcgatatagtatagcactaacaa 404  Q
    |||||||||| |||||||||  || |||||||||||||||||||||    
T  21157585 ggatatagtgcttctttttttgattgatatagtatagcactaacaa 21157540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 422
Target Start/End: Original strand, 29916034 - 29916095
Alignment:
Q  362 tatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagt 422  Q
    ||||||| |||| ||||  |||||||||||||| ||||||||| |||| |||||||||||||    
T  29916034 tatagtgcttctgttttagatcgatatagtataacactaacaatgttcattttggatatagt 29916095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 422
Target Start/End: Original strand, 29965187 - 29965248
Alignment:
Q  362 tatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagt 422  Q
    ||||||| |||| ||||  |||||||||||||| ||||||||| |||| |||||||||||||    
T  29965187 tatagtgcttctgttttagatcgatatagtataacactaacaatgttcattttggatatagt 29965248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 42464948 - 42464911
Alignment:
Q  144 cgatacgtatccggagagtatccaaatattaaatttta 181  Q
    ||||||||||||| |||||||||||||||||| |||||    
T  42464948 cgatacgtatccgaagagtatccaaatattaattttta 42464911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 89 - 138
Target Start/End: Complemental strand, 47750997 - 47750948
Alignment:
Q  89 tactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgata 138  Q
    ||||| ||||||||||||||||  ||||| |||||||||||||| |||||    
T  47750997 tacttcaaaatggatgacgtactatatcctctgcgtatcctgcaccgata 47750948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 421
Target Start/End: Original strand, 28548296 - 28548348
Alignment:
Q  370 ttcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatag 421  Q
    |||||||||| |||||||||| ||||||||||||| |||| ||||| ||||||    
T  28548296 ttcttttttggatcgatatagcatagcactaacaatgttctttttgaatatag 28548348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 278 - 306
Target Start/End: Original strand, 53192692 - 53192720
Alignment:
Q  278 gtgtaaaaaataagaataaaaacattata 306  Q
    |||||||||||||||||||||||||||||    
T  53192692 gtgtaaaaaataagaataaaaacattata 53192720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 262; Significance: 1e-146; HSPs: 83)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 75 - 483
Target Start/End: Complemental strand, 36367813 - 36367399
Alignment:
Q  75 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatacttttc-gatacgtatccggagagtatccaaatatt 173  Q
    |||||||| || ||||||| |||||||||||||||| ||||||||||||||||||||| |||||| |  | |||||||||||||||||||||||||||||    
T  36367813 ctgtgaagtcctgatacttcaaaatggatgacgtactgtatcccctgcgtatcctgcaccgatacctgcccgatacgtatccggagagtatccaaatatt 36367714  T
Q  174 aaattttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtgtttttt---atattattttgatttctgnnn 270  Q
    ||||||||       || || |||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||       
T  36367713 aaattttatttttttaaaaaataattatccgatactttccgatacatcccgatacgcacggatacttgtgtttttttttatattattttgatttctgttt 36367614  T
Q  271 nnnnnnn--gtgtaaaaaataagaataaaaacattataaacgttagttacttgttagtgttaactcttagtactgatgtgttcnnnnnnnggatatagtg 368  Q
             |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||    
T  36367613 tttttttttgtgtaaaaaataagaacaaaaacattataaacgttagttacttgttagtgttaactcttagtactgatgtgttctttttttggatatagtg 36367514  T
Q  369 attcttttttgaatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatgtataacactgctggtgctctttttggtatatatt 468  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36367513 attcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatgtataacactgctggtgctctttttggtatatatt 36367414  T
Q  469 gcgtatgtaattacc 483  Q
    |||||||||||||||    
T  36367413 gcgtatgtaattacc 36367399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 78 - 484
Target Start/End: Original strand, 37104120 - 37104538
Alignment:
Q  78 tgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatactt---------ttc--gatacgtatccggagagtatcc 166  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||||||||| |||||| |         |||  ||||||||||||||||||||||    
T  37104120 tgaagccccgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcaccgatacctgcccgatacttcctgatacgtatccggagagtatcc 37104219  T
Q  167 aaatattaaattttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtgtttttt-atattattttgatttc 265  Q
    |||||||||||||||       || || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  37104220 aaatattaaattttattttttaaaaaaataattatccgatactttccgatacatcccgatacgcacggatacttgtgtttttttatattattttgatttc 37104319  T
Q  266 tgnnnnnnnnnngtgtaaaaaataagaataaaaacattataaacgttagttacttgttagtgttaactcttagtactgatgtgttcnnnnnnnggatata 365  Q
    |           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||    
T  37104320 tattttttttttgtgtaaaaaataaaaataaaaacattataaacgttagttacttgttagtgttaactcttagtactgatgtgttctttttttggatata 37104419  T
Q  366 gtgattcttttttgaatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatgtataacactgctggtgctctttttggtatat 465  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  37104420 gtgattcttttttggatcgatatagtatagcactaacaagtttcttttggatatagtgtagcattgatgtataacactgttggtgctatttttggtatat 37104519  T
Q  466 attgcgtatgtaattacct 484  Q
    |||||||||||||||||||    
T  37104520 attgcgtatgtaattacct 37104538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 305 - 480
Target Start/End: Complemental strand, 28948606 - 28948431
Alignment:
Q  305 taaacgttagttacttgttagtgttaactcttagtactgatgtgttcnnnnnnnggatatagtgattcttttttgaatcgatatagtatagcactaacaa 404  Q
    |||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||| |||||||||||||| |||||||||    
T  28948606 taaacgttagttacttgttagtgttaactcttagtactgatgtgttctttttttggatatagtgattcttttttggatcgatatagtataacactaacaa 28948507  T
Q  405 gttccttttggatatagtgtagcattgatgtataacactgctggtgctctttttggtatatattgcgtatgtaatt 480  Q
    |||||||||||||||||||||||||||||||||| |  || |||||||||||||||||||||||| ||||||||||    
T  28948506 gttccttttggatatagtgtagcattgatgtatagctatgatggtgctctttttggtatatattgtgtatgtaatt 28948431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 305 - 480
Target Start/End: Original strand, 5984896 - 5985069
Alignment:
Q  305 taaacgttagttacttgttagtgttaactcttagtactgatgtgttcnnnnnnnggatatagtgattcttttttgaatcgatatagtatagcactaacaa 404  Q
    |||||||||||||||||||||||||||||||||||||||||||||||       |||||||||| |||||||||| ||||||||||||||||||| ||||    
T  5984896 taaacgttagttacttgttagtgttaactcttagtactgatgtgttctttttt-ggatatagtgcttcttttttggatcgatatagtatagcactgacaa 5984994  T
Q  405 gttccttttggatatagtgtagcattgatgtataacactgctggtgctctttttggtatatattgcgtatgtaatt 480  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  5984995 gttccttttggatatagtgtagcattgatgtataacactgatggtgctcttttt-gtatatattgcgtatgtaatt 5985069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 305 - 480
Target Start/End: Original strand, 25257326 - 25257499
Alignment:
Q  305 taaacgttagttacttgttagtgttaactcttagtactgatgtgttcnnnnnnnggatatagtgattcttttttgaatcgatatagtatagcactaacaa 404  Q
    |||||||||||||||||||||||||||||||||||||||||||||||       |||||||||| |||||||||| ||||||||||||||||||||||||    
T  25257326 taaacgttagttacttgttagtgttaactcttagtactgatgtgttctttttt-ggatatagtgcttcttttttggatcgatatagtatagcactaacaa 25257424  T
Q  405 gttccttttggatatagtgtagcattgatgtataacactgctggtgctctttttggtatatattgcgtatgtaatt 480  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||    
T  25257425 gttccttttggatatagtgtagcattgatgtatagcactgatggtgctcttttt-gtatatattgcgtatgtaatt 25257499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 305 - 480
Target Start/End: Complemental strand, 6916261 - 6916083
Alignment:
Q  305 taaacgttagttacttgttagtgttaactcttagtactgatgtgttcnnnnnnnggatatagtgattcttttttgaatcgatatagtatagcactaacaa 404  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||| |||||||||||||| |||||||||    
T  6916261 taaacgtcagttacttgttagtgttaactcttagtactgatgtgttctttttttggatatagtgattcttttttggatcgatatagtatatcactaacaa 6916162  T
Q  405 gttccttttggatatagtgtagcattgatgtataacactgctggtgctct---ttttggtatatattgcgtatgtaatt 480  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||   ||||||||||||||||||||||||||    
T  6916161 gttcattttggatatagtgtagcattgatgtataacactgatggtgctcttaattttggtatatattgcgtatgtaatt 6916083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 305 - 480
Target Start/End: Original strand, 38331158 - 38331336
Alignment:
Q  305 taaacgttagttacttgttagtgttaactcttagtactgatgtgttcnnnnnnnggatatagtgattcttttttgaatcgatatagtatagcactaacaa 404  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||| |||||||||||||| |||||||||    
T  38331158 taaacgtcagttacttgttagtgttaactcttagtactgatgtgttctttttttggatatagtgattcttttttggatcgatatagtatatcactaacaa 38331257  T
Q  405 gttccttttggatatagtgtagcattgatgtataacactgctggtgctct---ttttggtatatattgcgtatgtaatt 480  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||   ||||||||||||||||||||||||||    
T  38331258 gttcattttggatatagtgtagcattgatgtataacactgatggtgctcttaattttggtatatattgcgtatgtaatt 38331336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 359 - 483
Target Start/End: Complemental strand, 36363399 - 36363275
Alignment:
Q  359 ggatatagtgattcttttttgaatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatgtataacactgctggtgctcttttt 458  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36363399 ggatatagtgattcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatgtataacactgctggtgctcttttt 36363300  T
Q  459 ggtatatattgcgtatgtaattacc 483  Q
    |||||||||||||||||||||||||    
T  36363299 ggtatatattgcgtatgtaattacc 36363275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 73 - 306
Target Start/End: Complemental strand, 52895836 - 52895590
Alignment:
Q  73 ggctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac-----------ttttcgatacgtatccggagag 161  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||           ||| ||||||||||||||||||    
T  52895836 ggctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatactttccgatacgtatccggagag 52895737  T
Q  162 tatccaaatattaaattttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtgtt-ttttatattattttg 260  Q
    |||| |||||||||||||||       || || ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  52895736 tatctaaatattaaattttatttttttaaaaaataattatccgatactttccgatacatcccgatacgcacggatacttgtgtttttttatattattttg 52895637  T
Q  261 atttctg-nnnnnnnnnngtgtaaaaaataagaataaaaacattata 306  Q
    |||||||           |||||||||||||||||||||||||||||    
T  52895636 atttctgtttttttttttgtgtaaaaaataagaataaaaacattata 52895590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 74 - 306
Target Start/End: Complemental strand, 6916996 - 6916751
Alignment:
Q  74 gctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac-----------ttttcgatacgtatccggagagt 162  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||           ||| |||||||||||||||||||    
T  6916996 gctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatactttccgatacgtatccggagagt 6916897  T
Q  163 atccaaatattaaattttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtgtt-ttttatattattttga 261  Q
    ||| |||||||||||||||       || || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  6916896 atctaaatattaaattttatttttttaaaaaataattatccgatactttccgatacatcccgatacgcacggatacttgtgtttttttatattattttga 6916797  T
Q  262 tttctg-nnnnnnnnnngtgtaaaaaataagaataaaaacattata 306  Q
    ||||||           |||||||||||||||||||||||||||||    
T  6916796 tttctgtttttttttttgtgtaaaaaataagaataaaaacattata 6916751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 305 - 480
Target Start/End: Complemental strand, 52895100 - 52894922
Alignment:
Q  305 taaacgttagttacttgttagtgttaactcttagtactgatgtgttcnnnnnnnggatatagtgattcttttttgaatcgatatagtatagcactaacaa 404  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||       ||||||||||||| ||||||| |||||||||||||| |||||||||    
T  52895100 taaacgtcagttacttgttagtgttaactcttagtactgatgtgttctttttttggatatagtgatttttttttggatcgatatagtatatcactaacaa 52895001  T
Q  405 gttccttttggatatagtgtagcattgatgtataacactgctggtgctct---ttttggtatatattgcgtatgtaatt 480  Q
    |||| |||||||||||||||||||||||||||| |||||| |||||||||   ||||||||||||||||||||||||||    
T  52895000 gttcattttggatatagtgtagcattgatgtattacactgatggtgctcttaattttggtatatattgcgtatgtaatt 52894922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 313 - 480
Target Start/End: Original strand, 8132899 - 8133066
Alignment:
Q  313 agttacttgttagtgttaactcttagtactgatgtgttcnnnnnnnggatatagtgattcttttttgaatcgatatagtatagcactaacaagttccttt 412  Q
    |||||||||||||||||||||||||||||||||||||||       | ||||||||||||||||||| |||||||||| ||| ||||||||||||| |||    
T  8132899 agttacttgttagtgttaactcttagtactgatgtgttctttttttgaatatagtgattcttttttggatcgatatagaatatcactaacaagttcattt 8132998  T
Q  413 tggatatagtgtagcattgatgtataacactgctggtgctctttttggtatatattgcgtatgtaatt 480  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| |||||||||    
T  8132999 tggatatagtgtagcattgatgtataacagtgatggtgctctttttggtatatattgcatatgtaatt 8133066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 75 - 267
Target Start/End: Original strand, 38330424 - 38330628
Alignment:
Q  75 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac-----------ttttcgatacgtatccggagagta 163  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||           ||| ||||||||||||||||||||    
T  38330424 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatactttccgatacgtatccggagagta 38330523  T
Q  164 tccaaatattaaattttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtg-ttttttatattattttgat 262  Q
    || |||||||||||||||       || || ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  38330524 tctaaatattaaattttatttttttaaaaaataattatccgatactttccgatacatcccgatacgcacggatacttgtgtttttttatattattttgat 38330623  T
Q  263 ttctg 267  Q
    |||||    
T  38330624 ttctg 38330628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 303 - 480
Target Start/End: Original strand, 30324427 - 30324602
Alignment:
Q  303 tataaacgttagttacttgttagtgttaactcttagtactgatgtgttcnnnnnnnggatatagtgattcttttttgaatcgatatagtatagcactaac 402  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||| |||||||||| ||||||||||||||||||||||    
T  30324427 tataaacgttagttacttgttagtgttaactcttagtactgatgtgttctttttt-ggatatagtgcttcttttttggatcgatatagtatagcactaac 30324525  T
Q  403 aagttccttttggatatagtgtagcattgatgtataacactgctggtgctctttttggtatatattgcgtatgtaatt 480  Q
    || ||||||||||||||||||||||||||||| ||||||||| | ||| ||||||| |||||||||||||| ||||||    
T  30324526 aaattccttttggatatagtgtagcattgatgcataacactgatagtgatcttttt-gtatatattgcgtacgtaatt 30324602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 75 - 264
Target Start/End: Original strand, 38948729 - 38948929
Alignment:
Q  75 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgata-----------cttttcgatacgtatccggagagta 163  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||           ||| |||||||||||||| ||| ||    
T  38948729 ctgtgaagctccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatatctgcccaatacttctcgatacgtatccgaagaata 38948828  T
Q  164 tccaaatattaaattttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtgttttttatattattttgatt 263  Q
    ||||||||||||||||||       || || ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38948829 tccaaatattaaattttatttttttaaaaaataattatacgatactttccgatacatcccgatacgcacggatacttgtgttttttatattattttgatt 38948928  T
Q  264 t 264  Q
    |    
T  38948929 t 38948929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 75 - 267
Target Start/End: Complemental strand, 28949362 - 28949158
Alignment:
Q  75 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatactt---------ttc--gatacgtatccggagagta 163  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |         |||  |||||||||||||||||||    
T  28949362 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcctgatacgtatccggagagta 28949263  T
Q  164 tccaaatattaaattttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtgtt-ttttatattattttgat 262  Q
    ||||||||||||||||||       || || |||||||||||||||||||||||||||||||||| ||| |||||||||||| |||||||||||||||||    
T  28949262 tccaaatattaaattttatttttttaaaaaataattatccgatactttccgatacatcccgatacacacagatacttgtgtttttttatattattttgat 28949163  T
Q  263 ttctg 267  Q
    |||||    
T  28949162 ttctg 28949158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 72 - 267
Target Start/End: Original strand, 1043221 - 1043427
Alignment:
Q  72 tggctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac-----------ttttcgatacgtatccggaga 160  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||           ||  |||||||||||||||||    
T  1043221 tggctgtgaagccccgatacttcaaaatggatgatgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggaga 1043320  T
Q  161 gtatccaaatattaaattttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtgttttttatattattttg 260  Q
    |||||||||||||||||||||       || || |||||||| ||||||||||||||| || ||||||||||||||||||||||| ||||||||||||||    
T  1043321 gtatccaaatattaaattttatttttaaaaaaaataattatctgatactttccgatacgtctcgatacgcacggatacttgtgttctttatattattttg 1043420  T
Q  261 atttctg 267  Q
    |||||||    
T  1043421 atttctg 1043427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 74 - 267
Target Start/End: Original strand, 1036455 - 1036659
Alignment:
Q  74 gctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac-----------ttttcgatacgtatccggagagt 162  Q
    ||||||||||||  |||||| |||||||||||||||||||||||||||||||||||||| ||||||           ||| |||||||||||||||||||    
T  1036455 gctgtgaagccctcatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatactttccgatacgtatccggagagt 1036554  T
Q  163 atccaaatattaaattttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtgttttttatattattttgat 262  Q
    |||||||||||||||||||       || || |||||||| ||||||||||||||| || ||||||||||||||||||||||| ||||||||||||||||    
T  1036555 atccaaatattaaattttattttttaaaaaaataattatctgatactttccgatacgtctcgatacgcacggatacttgtgttctttatattattttgat 1036654  T
Q  263 ttctg 267  Q
    |||||    
T  1036655 ttctg 1036659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 75 - 267
Target Start/End: Original strand, 3426845 - 3427051
Alignment:
Q  75 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatacttttc-----------gatacgtatccggagagta 163  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| |||||| | ||           |||||||||||||||||||    
T  3426845 ctgtgaagccccgatactttaaaatggatgacgtattgtatcccctgcgtatcctgcaccgatacatgtccgatacttcctgatacgtatccggagagta 3426944  T
Q  164 tccaaatattaaattttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtg---ttttttatattattttg 260  Q
    ||||||||||||||||||       || || ||||||||||||||||| |||||||||||||||||||||||||||||||   |||||||||||||||||    
T  3426945 tccaaatattaaattttattttttaaaaaaataattatccgatactttgcgatacatcccgatacgcacggatacttgtgtttttttttatattattttg 3427044  T
Q  261 atttctg 267  Q
    |||||||    
T  3427045 atttctg 3427051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 305 - 480
Target Start/End: Original strand, 3427559 - 3427740
Alignment:
Q  305 taaacgttagttacttgttagtgttaactcttagtactgatgtgttcnnnnnnn------ggatatagtgattcttttttgaatcgatatagtatagcac 398  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||             ||||||||||||||||||||| |||||||||||||| |||    
T  3427559 taaacgttagttacttgttagtgttaactcttagtagtgatgtgttctttttttttttttggatatagtgattcttttttggatcgatatagtataacac 3427658  T
Q  399 taacaagttccttttggatatagtgtagcattgatgtataacactgctggtgctctttttggtatatattgcgtatgtaatt 480  Q
    |||||||||| ||||  ||||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||||||||    
T  3427659 taacaagttcattttatatatagtgtagcattgatgtatagcacagatggtgctctttttggtatatattgcgtatgtaatt 3427740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 359 - 477
Target Start/End: Original strand, 43190018 - 43190137
Alignment:
Q  359 ggatatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatgtataacactgctggtgctctttt 457  Q
    |||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  43190018 ggatatagtgcttcttttttggatcgatatagtatagcactaacaatgttccttttggatatagtatagcattgatgtataacactgctcgtgctctttt 43190117  T
Q  458 tggtatatattgcgtatgta 477  Q
    | |||||| |||||||||||    
T  43190118 ttgtatattttgcgtatgta 43190137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 360 - 480
Target Start/End: Complemental strand, 28658746 - 28658625
Alignment:
Q  360 gatatagtgattcttttttgaatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatgtataacactg--ctggtgctctttt 457  Q
    ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||   ||||| ||||||    
T  28658746 gatatagtgcttcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagca-tgatgtatagcactgatatggtgttctttt 28658648  T
Q  458 tggtatatattgcgtatgtaatt 480  Q
    ||||||||||||| |||||||||    
T  28658647 tggtatatattgcatatgtaatt 28658625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 78 - 306
Target Start/End: Complemental strand, 20409672 - 20409443
Alignment:
Q  78 tgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgca-----------tcgatacttttcgatacgtatccggagagtatcc 166  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||            ||||||||  |||||||||||||||||||||||    
T  20409672 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagtatcc 20409573  T
Q  167 aaatattaaattttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtgttttttatattattttgatttct 266  Q
    |||||||||||||||       || || ||||||          |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  20409572 aaatattaaattttatttttttaaaaaataatta----------tccgatacatcccgatacgcacagatacgtgtgttttttatattattttgatttct 20409483  T
Q  267 gnnnnnnnnnngtgtaaaaaataagaataaaaacattata 306  Q
               |||||||||||||||||||||| ||||||    
T  20409482 attttttttttgtgtaaaaaataagaataaaaatattata 20409443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 359 - 480
Target Start/End: Original strand, 14334532 - 14334652
Alignment:
Q  359 ggatatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatgtataacactgctggtgctctttt 457  Q
    |||||| ||| |||||||||| |||||||||||||||||||||||| ||| |||||||||||||| |||||||||  |||||||||| ||||||||||||    
T  14334532 ggatatggtgcttcttttttggatcgatatagtatagcactaacaatgtttcttttggatatagtatagcattga--tataacactgatggtgctctttt 14334629  T
Q  458 tggtatatattgcgtatgtaatt 480  Q
    |||||||| || |||||||||||    
T  14334630 tggtatattttacgtatgtaatt 14334652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 359 - 480
Target Start/End: Complemental strand, 31653159 - 31653039
Alignment:
Q  359 ggatatagtgattcttttttgaatcgatatagtatagcactaacaagtt-ccttttggatatagtgtagcattgatgtataacactgctggtgctctttt 457  Q
    |||||||||| |||||||||| ||||||||||||||||| |||||| || ||||||||||||||| ||||||||||  ||||||||  ||||||||||||    
T  31653159 ggatatagtgcttcttttttggatcgatatagtatagcattaacaattttccttttggatatagtatagcattgat--ataacacttatggtgctctttt 31653062  T
Q  458 tggtatatattgcgtatgtaatt 480  Q
    |||||||| ||||||||||||||    
T  31653061 tggtatattttgcgtatgtaatt 31653039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 75 - 181
Target Start/End: Original strand, 8132180 - 8132297
Alignment:
Q  75 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgca-----------tcgatacttttcgatacgtatccggagagta 163  Q
    ||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||||||           |||||||||  ||||||||||||||||||||    
T  8132180 ctgtgaagctccgatacttcaaaatagatgacgtaccgtatcccctgcgtatcctgcaccgatacatgttcgatacttcccgatacgtatccggagagta 8132279  T
Q  164 tccaaatattaaatttta 181  Q
    ||||||||||||||||||    
T  8132280 tccaaatattaaatttta 8132297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 87 - 267
Target Start/End: Complemental strand, 28659409 - 28659228
Alignment:
Q  87 gatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac-----------ttttcgatacgtatccggagagtatccaaatattaa 175  Q
    |||||||||||||||||||||||| |||| ||||||||||| |||| ||||||           ||| ||||||||||||||||||||||||||||||||    
T  28659409 gatactttaaaatggatgacgtacggtattccctgcgtatcatgcaccgatacatgcccgatactttccgatacgtatccggagagtatccaaatattaa 28659310  T
Q  176 attttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtgttttttatattattttgatttctg 267  Q
    ||||||       || || |||||||||||||| ||          |||||||| ||| |||||||||||||||||||||||||||||||||    
T  28659309 attttatttttttaaaaaataattatccgatacgtt----------ccgatacgtacgaatacttgtgttttttatattattttgatttctg 28659228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 75 - 139
Target Start/End: Complemental strand, 37346969 - 37346905
Alignment:
Q  75 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac 139  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  37346969 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatac 37346905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 75 - 180
Target Start/End: Original strand, 43189652 - 43189768
Alignment:
Q  75 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgca-----------tcgatacttttcgatacgtatccggagagta 163  Q
    |||||||| |||||||||| ||||||||||| ||||||||||||||||||||||||||            |||||||| |||||||||||| ||||||||    
T  43189652 ctgtgaagacccgatacttcaaaatggatgatgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttctcgatacgtatcaggagagta 43189751  T
Q  164 tccaaatattaaatttt 180  Q
    |||||||||||||||||    
T  43189752 tccaaatattaaatttt 43189768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 359 - 480
Target Start/End: Complemental strand, 13012733 - 13012620
Alignment:
Q  359 ggatatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatgtataacactgctggtgctctttt 457  Q
    |||||||||| |||||||||| ||||||||| |||||||||| ||| ||||||||| |||||||| || ||||||||||         ||||||||||||    
T  13012733 ggatatagtgcttcttttttggatcgatataatatagcactagcaatgttccttttagatatagtataacattgatgta---------tggtgctctttt 13012643  T
Q  458 tggtatatattgcgtatgtaatt 480  Q
    |||||||| ||||||||||||||    
T  13012642 tggtatattttgcgtatgtaatt 13012620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 360 - 428
Target Start/End: Original strand, 24851732 - 24851801
Alignment:
Q  360 gatatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagtgtagca 428  Q
    |||||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||| |||||    
T  24851732 gatatagtgattcttttttggatcgatatagtatagcactaacaatgttcgttttggatatagtatagca 24851801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 74 - 266
Target Start/End: Complemental strand, 13013114 - 13012921
Alignment:
Q  74 gctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcat-----------cgatacttttcgatacgtatccggagagt 162  Q
    ||||||||||||| |||||| |||||||||||| || ||||||||||| ||||| ||||            ||||||||  ||||||||||| |||||||    
T  13013114 gctgtgaagccccaatacttcaaaatggatgacatatcgtatcccctgtgtatcatgcactgatacctgcccgatacttcccgatacgtatcgggagagt 13013015  T
Q  163 atccaaatattaaattttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtgttttttatattattttgat 262  Q
    |||||||||||||||||||       |||||  ||| ||       |||||||||| ||||||||||||| ||| |||||||||||||||||||||||||    
T  13013014 atccaaatattaaattttatttttt-aagaa--aataat-------tttccgatacgtcccgatacgcactgattcttgtgttttttatattattttgat 13012925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 222 - 306
Target Start/End: Original strand, 8132318 - 8132401
Alignment:
Q  222 ccgatacgcacggatacttgtgttttttatattattttgatttctgnnnnnnnnnngtgtaaaaaataagaataaaaacattata 306  Q
    |||||||||||||||||||||||||||||||||||||| |||||||          |||||||||||||||||||||||||||||    
T  8132318 ccgatacgcacggatacttgtgttttttatattattttaatttctg-tttttttttgtgtaaaaaataagaataaaaacattata 8132401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 75 - 139
Target Start/End: Original strand, 2364674 - 2364738
Alignment:
Q  75 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac 139  Q
    ||||||| ||| ||||||| ||||||||| ||||||| |||||||||||||||||||||||||||    
T  2364674 ctgtgaaacccagatacttcaaaatggataacgtaccatatcccctgcgtatcctgcatcgatac 2364738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 79 - 139
Target Start/End: Original strand, 5984228 - 5984288
Alignment:
Q  79 gaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac 139  Q
    ||||||||||||||| |||||||||||||||| ||||||||||||||| ||||| ||||||    
T  5984228 gaagccccgatacttcaaaatggatgacgtactgtatcccctgcgtattctgcaccgatac 5984288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 75 - 139
Target Start/End: Original strand, 9781639 - 9781703
Alignment:
Q  75 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac 139  Q
    ||||||||||| ||||||| ||||||| ||||||| |||||||||||||||||||||| ||||||    
T  9781639 ctgtgaagccctgatacttcaaaatggttgacgtatcgtatcccctgcgtatcctgcaccgatac 9781703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 80 - 139
Target Start/End: Complemental strand, 41676105 - 41676046
Alignment:
Q  80 aagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac 139  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||| |||| ||||||    
T  41676105 aagccccgatattttaaaatggatgacgtaccgtatctcctgcgtatcatgcaccgatac 41676046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 38218404 - 38218536
Alignment:
Q  84 cccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatacttttcgatacgtatccggagagtatccaaatattaaattttann 183  Q
    |||||||||| |||||||||||||||||||||||| |||||||    |  |||||||| | |||||||||| | ||||||||| || |||||||||||      
T  38218404 cccgatacttcaaaatggatgacgtaccgtatcccttgcgtat----ctccgatacttcttgatacgtatcagaagagtatccgaagattaaattttatt 38218499  T
Q  184 nnnnnaagaactaattatccgatactttccgatacat 220  Q
         || || ||||||| |||||||| |||||||||    
T  38218500 tttttaaaaaataattattcgatacttcccgatacat 38218536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 209 - 267
Target Start/End: Original strand, 14334292 - 14334352
Alignment:
Q  209 tttccgatacatcccgatacgcacggatacttgtg--ttttttatattattttgatttctg 267  Q
    ||||||||| ||||| |||||||||||||||||||  ||||||||||||||||||||||||    
T  14334292 tttccgatatatcccaatacgcacggatacttgtgatttttttatattattttgatttctg 14334352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 222 - 267
Target Start/End: Original strand, 43189790 - 43189835
Alignment:
Q  222 ccgatacgcacggatacttgtgttttttatattattttgatttctg 267  Q
    |||||||||||| |||||||||||||||||||||||||||||||||    
T  43189790 ccgatacgcacgaatacttgtgttttttatattattttgatttctg 43189835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 359 - 434
Target Start/End: Original strand, 47654925 - 47655001
Alignment:
Q  359 ggatatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatg 434  Q
    |||||||||| |||||||||| |||||||||||||| ||||||||| |||| ||||||||||| | ||||| |||||    
T  47654925 ggatatagtgcttcttttttggatcgatatagtataacactaacaatgttcattttggatataatatagcactgatg 47655001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 362 - 428
Target Start/End: Complemental strand, 9528720 - 9528653
Alignment:
Q  362 tatagtgattcttttttgaatcgatatagtatagcactaac-aagttccttttggatatagtgtagca 428  Q
    ||||||| |||||||||| |||||||||||||||||||||| | ||| |||||||||||||| |||||    
T  9528720 tatagtgcttcttttttggatcgatatagtatagcactaacgatgtttcttttggatatagtatagca 9528653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 75 - 138
Target Start/End: Complemental strand, 34096673 - 34096610
Alignment:
Q  75 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgata 138  Q
    |||||||||||||||| || ||||||  ||||||| |||||||||||||||||||||| |||||    
T  34096673 ctgtgaagccccgatatttcaaaatgattgacgtatcgtatcccctgcgtatcctgcaccgata 34096610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 359 - 463
Target Start/End: Complemental strand, 37346699 - 37346595
Alignment:
Q  359 ggatatagtgattcttttttgaatcgatatagtatagcactaacaa-gtt-ccttttggatatagtgtagcattgatgtataacactgctggtgctcttt 456  Q
    |||||||||| |||||||||  || |||||||||||||| |||||| ||| |||||| |||||||| |||||||||  ||||||||   |||||||||||    
T  37346699 ggatatagtgcttctttttttgattgatatagtatagcattaacaatgttccctttttgatatagtatagcattga--tataacaccaatggtgctcttt 37346602  T
Q  457 ttggtat 463  Q
    |||||||    
T  37346601 ttggtat 37346595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 76 - 126
Target Start/End: Original strand, 24849362 - 24849412
Alignment:
Q  76 tgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtat 126  Q
    |||||||| ||||||||| ||||| ||||||||||||||||||||||||||    
T  24849362 tgtgaagctccgatacttcaaaatagatgacgtaccgtatcccctgcgtat 24849412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 222 - 267
Target Start/End: Original strand, 25256760 - 25256806
Alignment:
Q  222 ccgatacgcacggatacttgtg-ttttttatattattttgatttctg 267  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||    
T  25256760 ccgatacgcacggatacttgtgtttttttatattattttgatttctg 25256806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 75 - 132
Target Start/End: Complemental strand, 2472975 - 2472918
Alignment:
Q  75 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgca 132  Q
    ||||||||| ||||||||| ||||| ||||||||| |||||||||||| |||||||||    
T  2472975 ctgtgaagctccgatacttcaaaatagatgacgtatcgtatcccctgcatatcctgca 2472918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 76 - 180
Target Start/End: Complemental strand, 3708399 - 3708284
Alignment:
Q  76 tgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatc-----------gatacttttcgatacgtatccggagagtat 164  Q
    |||||| ||||||||||| ||||||||||||||| ||||||| |||| |||||| || |           |||||||||||||||||||| |||||||||    
T  3708399 tgtgaaaccccgatacttcaaaatggatgacgtatcgtatcctctgcatatcctacaccaatacatgcccgatacttttcgatacgtatcaggagagtat 3708300  T
Q  165 ccaaatattaaatttt 180  Q
     | |||||||||||||    
T  3708299 tcgaatattaaatttt 3708284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 222 - 306
Target Start/End: Complemental strand, 31653385 - 31653299
Alignment:
Q  222 ccgatacgcacggatacttgtgtt--ttttatattattttgatttctgnnnnnnnnnngtgtaaaaaataagaataaaaacattata 306  Q
    ||||||||||||||||||||||||  ||||||||||||||||||| ||           ||||||||||||||||||||||||||||    
T  31653385 ccgatacgcacggatacttgtgttttttttatattattttgatttatgtgctttttttttgtaaaaaataagaataaaaacattata 31653299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 75 - 132
Target Start/End: Complemental strand, 34432504 - 34432447
Alignment:
Q  75 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgca 132  Q
    ||||||||| ||||||||| |||||||||||||||  |||||||||||||||| ||||    
T  34432504 ctgtgaagctccgatacttcaaaatggatgacgtattgtatcccctgcgtatcatgca 34432447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 365 - 428
Target Start/End: Original strand, 9781887 - 9781951
Alignment:
Q  365 agtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagtgtagca 428  Q
    |||| |||||||||| ||||||| |||||||||||||||| ||| |||||||||||||| |||||    
T  9781887 agtgcttcttttttggatcgatacagtatagcactaacaatgtttcttttggatatagtatagca 9781951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 75 - 139
Target Start/End: Original strand, 29167944 - 29168008
Alignment:
Q  75 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac 139  Q
    |||| ||||| | |||||| ||||||||||||||| | |||||||||||||||||||| ||||||    
T  29167944 ctgtaaagcctccatacttcaaaatggatgacgtatcatatcccctgcgtatcctgcaccgatac 29168008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 80 - 132
Target Start/End: Complemental strand, 32381175 - 32381123
Alignment:
Q  80 aagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgca 132  Q
    ||||||||||||||||||||||||||  ||||||||||||||| |||| ||||    
T  32381175 aagccccgatactttaaaatggatgatataccgtatcccctgcatatcatgca 32381123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 361 - 420
Target Start/End: Original strand, 36551647 - 36551707
Alignment:
Q  361 atatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatata 420  Q
    |||||||| |||||||||  |||||||||||||| ||||||||| ||||||||||||||||    
T  36551647 atatagtgtttcttttttagatcgatatagtataacactaacaatgttccttttggatata 36551707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 134 - 181
Target Start/End: Original strand, 25256683 - 25256730
Alignment:
Q  134 cgatacttttcgatacgtatccggagagtatccaaatattaaatttta 181  Q
    ||||||||  ||||||||||||||||||||| ||||||||||||||||    
T  25256683 cgatacttcccgatacgtatccggagagtattcaaatattaaatttta 25256730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 134 - 181
Target Start/End: Original strand, 30323782 - 30323829
Alignment:
Q  134 cgatacttttcgatacgtatccggagagtatccaaatattaaatttta 181  Q
    ||||||||  ||||||||||| ||||||||||||||||||||||||||    
T  30323782 cgatacttcccgatacgtatctggagagtatccaaatattaaatttta 30323829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 134 - 181
Target Start/End: Complemental strand, 31653453 - 31653406
Alignment:
Q  134 cgatacttttcgatacgtatccggagagtatccaaatattaaatttta 181  Q
    ||||||||  ||||||||||| ||||||||||||||||||||||||||    
T  31653453 cgatacttcccgatacgtatcgggagagtatccaaatattaaatttta 31653406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 362 - 428
Target Start/End: Complemental strand, 34096429 - 34096362
Alignment:
Q  362 tatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagtgtagca 428  Q
    ||||||| |||||||||  |||||||||||||||||||||||| ||| ||||| |||||||| |||||    
T  34096429 tatagtgcttcttttttagatcgatatagtatagcactaacaatgtttcttttagatatagtatagca 34096362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 384 - 434
Target Start/End: Original strand, 37922478 - 37922529
Alignment:
Q  384 gatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatg 434  Q
    ||||||||||||||||||||| ||| |||||||||||||| |||||||||||    
T  37922478 gatatagtatagcactaacaatgtttcttttggatatagtatagcattgatg 37922529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 78 - 132
Target Start/End: Original strand, 10822402 - 10822456
Alignment:
Q  78 tgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgca 132  Q
    ||||||| |||||||| ||||||||||||||| | ||| ||||||||||||||||    
T  10822402 tgaagcctcgatacttcaaaatggatgacgtatcatattccctgcgtatcctgca 10822456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 76 - 138
Target Start/End: Original strand, 14167082 - 14167144
Alignment:
Q  76 tgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgata 138  Q
    ||||||| | |||||||| |||||||||||| || |||||| ||||||||||||||| |||||    
T  14167082 tgtgaagtctcgatacttcaaaatggatgacttatcgtatcacctgcgtatcctgcaccgata 14167144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 362 - 422
Target Start/End: Complemental strand, 34432291 - 34432230
Alignment:
Q  362 tatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagt 422  Q
    ||||||| |||||||||| |||||||||||||| ||||||||| ||| |||| |||||||||    
T  34432291 tatagtgcttcttttttggatcgatatagtataacactaacaatgtttctttgggatatagt 34432230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 78 - 154
Target Start/End: Complemental strand, 8829826 - 8829751
Alignment:
Q  78 tgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatacttttcgatacgtatc 154  Q
    ||||||||  |||||| ||||| || || ||||||||| || ||||||||||||||||||||||  |||||||||||    
T  8829826 tgaagcccaaatacttcaaaatagacgaagtaccgtattcc-tgcgtatcctgcatcgatacttcccgatacgtatc 8829751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 361 - 420
Target Start/End: Complemental strand, 24589978 - 24589918
Alignment:
Q  361 atatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatata 420  Q
    |||||||| |||||||||| |||||||||||||| ||||||||| |||| ||||| |||||    
T  24589978 atatagtgtttcttttttggatcgatatagtataacactaacaatgttctttttgaatata 24589918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 359 - 422
Target Start/End: Complemental strand, 32380937 - 32380873
Alignment:
Q  359 ggatatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagt 422  Q
    ||||||| || |||||||||||||  |||||||||| ||||||||| |||||||||| |||||||    
T  32380937 ggatataatgcttcttttttgaataaatatagtataacactaacaatgttccttttgaatatagt 32380873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 83 - 139
Target Start/End: Original strand, 33039618 - 33039674
Alignment:
Q  83 ccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac 139  Q
    ||||||||||||||||||||| || ||  ||||||| ||||||||||||| ||||||    
T  33039618 ccccgatactttaaaatggataacatattgtatcccttgcgtatcctgcaccgatac 33039674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 127
Target Start/End: Original strand, 36551492 - 36551540
Alignment:
Q  79 gaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatc 127  Q
    ||||||||||||||| ||||| |||||||||| || |||||||||||||    
T  36551492 gaagccccgatacttcaaaattgatgacgtactgtctcccctgcgtatc 36551540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 80 - 132
Target Start/End: Original strand, 40775997 - 40776049
Alignment:
Q  80 aagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgca 132  Q
    |||||| ||||||| |||||||| ||||||  |||||||||||||||||||||    
T  40775997 aagcccagatacttcaaaatggaagacgtaatgtatcccctgcgtatcctgca 40776049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 146 - 181
Target Start/End: Original strand, 5984306 - 5984341
Alignment:
Q  146 atacgtatccggagagtatccaaatattaaatttta 181  Q
    ||||||||| ||||||||||||||||||||||||||    
T  5984306 atacgtatctggagagtatccaaatattaaatttta 5984341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 428
Target Start/End: Original strand, 10822644 - 10822703
Alignment:
Q  370 ttcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagtgtagca 428  Q
    |||||||||| ||||||||| |||| ||||||||| ||| |||||||||||||| |||||    
T  10822644 ttcttttttggatcgatataatatatcactaacaatgtttcttttggatatagtatagca 10822703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 74 - 116
Target Start/End: Original strand, 14334168 - 14334209
Alignment:
Q  74 gctgtgaagccccgatactttaaaatggatgacgtaccgtatc 116  Q
    |||||||||||| ||||||| ||||||||||||||||||||||    
T  14334168 gctgtgaagccc-gatacttcaaaatggatgacgtaccgtatc 14334209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 78 - 132
Target Start/End: Complemental strand, 24590233 - 24590179
Alignment:
Q  78 tgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgca 132  Q
    |||||| ||||||||| |||| ||||| |||||||||| || |||||||||||||    
T  24590233 tgaagcgccgatacttcaaaagggatggcgtaccgtattccttgcgtatcctgca 24590179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 222 - 267
Target Start/End: Original strand, 30323861 - 30323907
Alignment:
Q  222 ccgatacgcacggatacttgtgtttt-ttatattattttgatttctg 267  Q
    ||||||||||| || ||||||||||| ||||||||||||||||||||    
T  30323861 ccgatacgcacagacacttgtgtttttttatattattttgatttctg 30323907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 76 - 134
Target Start/End: Original strand, 37922265 - 37922323
Alignment:
Q  76 tgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatc 134  Q
    |||||||| |||||| ||||||||||| ||||||| ||||| | ||| |||||||||||    
T  37922265 tgtgaagctccgatattttaaaatggacgacgtactgtatctcatgcatatcctgcatc 37922323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 10763668 - 10763705
Alignment:
Q  85 ccgatactttaaaatggatgacgtaccgtatcccctgc 122  Q
    ||||||||||||||||| ||||||| ||||||||||||    
T  10763668 ccgatactttaaaatggttgacgtatcgtatcccctgc 10763705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 181
Target Start/End: Original strand, 14334237 - 14334274
Alignment:
Q  144 cgatacgtatccggagagtatccaaatattaaatttta 181  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  14334237 cgatacgtattgggagagtatccaaatattaaatttta 14334274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 422
Target Start/End: Original strand, 29168197 - 29168250
Alignment:
Q  370 ttcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagt 422  Q
    |||||||||| ||| ||||||||||| |||||||| ||| ||||||||||||||    
T  29168197 ttcttttttggatcaatatagtatagtactaacaatgtttcttttggatatagt 29168250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 75 - 132
Target Start/End: Original strand, 30323712 - 30323769
Alignment:
Q  75 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgca 132  Q
    |||| |||||||||||||| ||||||||||||| | ||||| | ||| ||||||||||    
T  30323712 ctgtaaagccccgatacttcaaaatggatgacgcaacgtattctctgtgtatcctgca 30323769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 37346889 - 37346852
Alignment:
Q  144 cgatacgtatccggagagtatccaaatattaaatttta 181  Q
    ||||||||||| || |||||||||||||||||||||||    
T  37346889 cgatacgtatcgggggagtatccaaatattaaatttta 37346852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 421
Target Start/End: Original strand, 10763903 - 10763955
Alignment:
Q  370 ttcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatag 421  Q
    |||||||||  ||||||||||||||||||||| || ||| |||||||||||||    
T  10763903 ttcttttttagatcgatatagtatagcactaaaaatgtttcttttggatatag 10763955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 78 - 138
Target Start/End: Original strand, 15417453 - 15417513
Alignment:
Q  78 tgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgata 138  Q
    ||||| || ||||||||||||||||||| ||| | ||| | |||||||| |||||||||||    
T  15417453 tgaagtccagatactttaaaatggatgatgtatcatattctctgcgtattctgcatcgata 15417513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 76 - 132
Target Start/End: Original strand, 25256614 - 25256670
Alignment:
Q  76 tgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgca 132  Q
    |||||||| | |||| || |||||||||||||||| |||||| |||||||| |||||    
T  25256614 tgtgaagctctgatatttcaaaatggatgacgtactgtatcctctgcgtattctgca 25256670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 76 - 132
Target Start/End: Original strand, 29861799 - 29861855
Alignment:
Q  76 tgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgca 132  Q
    |||||||||||||||||| ||||||| |||||||  ||||| ||| |||||| ||||    
T  29861799 tgtgaagccccgatacttcaaaatggttgacgtattgtatctcctacgtatcatgca 29861855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 254; Significance: 1e-141; HSPs: 84)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 75 - 483
Target Start/End: Original strand, 48163402 - 48163826
Alignment:
Q  75 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac-----------ttttcgatacgtatccggagagta 163  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| ||||||           ||  ||||||||||||||||||||    
T  48163402 ctgtgaagccccgatacttcaaaatgggtgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagta 48163501  T
Q  164 tccaaatattaaattttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtgtttttt---atattattttg 260  Q
    ||||||||||||||||||       || || |||||||||||||||||||||||||||| ||||||||||||||||||||||||||   |||||||||||    
T  48163502 tccaaatattaaattttatttttttaaaaaataattatccgatactttccgatacatcctgatacgcacggatacttgtgtttttttttatattattttg 48163601  T
Q  261 atttctgnnnnnnnnnngtgt--aaaaaataagaataaaaacattataaacgttagttacttgttagtgttaactcttagtactgatgtgttcnnnnnnn 358  Q
    |||||||          ||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||           
T  48163602 atttctgttttttttttgtgtgtaaaaaataagaataaaaacattataaacgttagttacttgttagtgttaactcttagtactgatgtgttcttttttt 48163701  T
Q  359 ggatatagtgattcttttttgaatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatgtataacactgctggtgctcttttt 458  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48163702 ggatatagtgattcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatgtataacactgctggtgctcttttt 48163801  T
Q  459 ggtatatattgcgtatgtaattacc 483  Q
    |||||||||||||||||||||||||    
T  48163802 ggtatatattgcgtatgtaattacc 48163826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 74 - 483
Target Start/End: Original strand, 27353914 - 27354339
Alignment:
Q  74 gctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac-----------ttttcgatacgtatccggagagt 162  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| ||||||           ||  |||||||||||||||||||    
T  27353914 gctgtgaagccccgatacttcaaaatggatgacgtaccgtattccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagt 27354013  T
Q  163 atccaaatattaaattttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtgtttttt--atattattttg 260  Q
    |||||||||||||||||||       || || |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  27354014 atccaaatattaaattttatttttttaaaaaataattatccgatactttccgatacatcccgatacgcacggatacttgtgttttttttatattattttg 27354113  T
Q  261 atttctgnnnnnnnnnn---gtgtaaaaaataagaataaaaacattataaacgttagttacttgttagtgttaactcttagtactgatgtgttcnnnnnn 357  Q
    |||||||             |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          
T  27354114 atttctgtttttttttttgtgtgtgaaaaataagaataaaaacattataaacgttagttacttgttagtgttaactcttagtactgatgtgttctttttt 27354213  T
Q  358 nggatatagtgattcttttttgaatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatgtataacactgctggtgctctttt 457  Q
     ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27354214 tggatatagtgattcttttttggatcgatataatatagcactaacaagttccttttggatatagtgtagcattgatgtataacactgctggtgctctttt 27354313  T
Q  458 tggtatatattgcgtatgtaattacc 483  Q
    || ||||| |||||||||||||||||    
T  27354314 tgatatatgttgcgtatgtaattacc 27354339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 76 - 483
Target Start/End: Complemental strand, 27555489 - 27555066
Alignment:
Q  76 tgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatacttttc-----------gatacgtatccggagagtat 164  Q
    |||||||||| ||||||| ||||||||||||||||||||| | |||||||| ||||| |||||| | ||           ||||||||||||||||||||    
T  27555489 tgtgaagccctgatacttcaaaatggatgacgtaccgtattctctgcgtattctgcaccgatacctgtccgatacttcccgatacgtatccggagagtat 27555390  T
Q  165 ccaaatattaaattttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtgtttttt--atattattttgat 262  Q
    |||||||||||||||||       || || |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  27555389 ccaaatattaaattttatttttttaaaaaataattatccgatactttccgatacatcccgatacgcacggatacttgtgttttttttatattattttgat 27555290  T
Q  263 ttctgnnnnnnnnnn---gtgtaaaaaataagaataaaaacattataaacgttagttacttgttagtgttaactcttagtactgatgtgttcnnnnnnng 359  Q
    |||||             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |    
T  27555289 ttctgtttttttttttgtgtgtaaaaaataagaataaaaacattataaacgttagttacttgttagtgttaactcttagtactgatgtgttctttttttg 27555190  T
Q  360 gatatagtgattcttttttgaatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatgtataacactgctggtgctctttttg 459  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27555189 gatatagtgattcttttttggatcgatatagtataacactaacaagttccttttggatatagtgtagcattgatgtataacactgctggtgctctttttg 27555090  T
Q  460 gtatatattgcgtatgtaattacc 483  Q
    ||||||||||||||||||||||||    
T  27555089 gtatatattgcgtatgtaattacc 27555066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 75 - 481
Target Start/End: Original strand, 16850780 - 16851199
Alignment:
Q  75 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatactt-----------ttcgatacgtatccggagagta 163  Q
    |||||||||||||||| || ||||||||||||||||||||| ||||| ||||| |||| ||||||||           | ||||||||||| | ||||||    
T  16850780 ctgtgaagccccgatatttcaaaatggatgacgtaccgtattccctgtgtatcatgcaccgatacttgcccgatactttccgatacgtatctgaagagta 16850879  T
Q  164 tccaaatattaaattttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtgtttttt-atattattttgat 262  Q
    ||||||||||||||||||       || || ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  16850880 tccaaatattaaattttattttttaaaaaaataattatccgatactttccgatacatcccgatacgtacggatacttgtgtttttttatattattttgat 16850979  T
Q  263 ttctgnnnnnnnnnn-gtgtaaaaaataagaataaaaacattataaacgttagttacttgttagtgttaactcttagtactgatgtgttcnnnnnnngga 361  Q
    ||||            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||    
T  16850980 ttctttttttttttttgtgtaaaaaataagaataaaaacattataaacgttagttacttgttagtgttaactcttagtactgatgtgttctttttttgga 16851079  T
Q  362 tatagtgattcttttttgaatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatgtataacactgctggtgctctttttggt 461  Q
    |||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  16851080 tatagtgattcttttttggatcgatatagtatatcactaacaagtttcttttggatatagtgtagcattgatgtataatactgctggtgctctttttggt 16851179  T
Q  462 atatattgcgtatgtaatta 481  Q
    ||||||||||||||||||||    
T  16851180 atatattgcgtatgtaatta 16851199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 305 - 480
Target Start/End: Original strand, 40096378 - 40096556
Alignment:
Q  305 taaacgttagttacttgttagtgttaactcttagtactgatgtgttcnnnnnnnggatatagtgattcttttttgaatcgatatagtatagcactaacaa 404  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||       ||||||||||||| ||||||| |||||||||||||| |||||||||    
T  40096378 taaacgtcagttacttgttagtgttaactcttagtactgatgtgttctttttttggatatagtgatttttttttggatcgatatagtatatcactaacaa 40096477  T
Q  405 gttccttttggatatagtgtagcattgatgtataacactgctggtgctct---ttttggtatatattgcgtatgtaatt 480  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||   ||||||||||||||||||||||||||    
T  40096478 gttcattttggatatagtgtagcattgatgtataacactgatggtgctcttaattttggtatatattgcgtatgtaatt 40096556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 305 - 480
Target Start/End: Original strand, 36661185 - 36661359
Alignment:
Q  305 taaacgttagttacttgttagtgttaactcttagtactgatgtgttcnnnnnnnggatatagtgattcttttttgaatcgatatagtatagcactaacaa 404  Q
    |||||||||||||||||||||||||||||||||||||||||||||||       ||||| |||| |||||||||| ||||||| |||||| |||||||||    
T  36661185 taaacgttagttacttgttagtgttaactcttagtactgatgtgttctttttt-ggatacagtgcttcttttttggatcgataaagtataacactaacaa 36661283  T
Q  405 gttccttttggatatagtgtagcattgatgtataacactgctggtgctctttttggtatatattgcgtatgtaatt 480  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||    
T  36661284 gttccttttggatatagtgtagcattgatgtatagcactgatggtgctctttttggtatatattacgtatgtaatt 36661359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 75 - 267
Target Start/End: Original strand, 34238152 - 34238355
Alignment:
Q  75 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac-----------ttttcgatacgtatccggagagta 163  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||||||           ||| |||||||||| |||||||||    
T  34238152 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtattctgcaccgatacctgcccgatactttccgatacgtattcggagagta 34238251  T
Q  164 tccaaatattaaattttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtgttttttatattattttgatt 263  Q
    ||||||||||||||||||       || || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34238252 tccaaatattaaattttatttttaaaaaaaataattatccgatactttccgatacatcccgatacgcacggatacttgtgttttttatattattttgatt 34238351  T
Q  264 tctg 267  Q
    ||||    
T  34238352 tctg 34238355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 74 - 306
Target Start/End: Original strand, 40095643 - 40095888
Alignment:
Q  74 gctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac-----------ttttcgatacgtatccggagagt 162  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||           ||| |||||||||||||||||||    
T  40095643 gctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatactttccgatacgtatccggagagt 40095742  T
Q  163 atccaaatattaaattttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtg-ttttttatattattttga 261  Q
    ||| |||||||||||||||       || || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  40095743 atctaaatattaaattttatttttttaaaaaataattatccgatactttccgatacatcccgatacgcacggatacttgtgtttttttatattattttga 40095842  T
Q  262 tttctg-nnnnnnnnnngtgtaaaaaataagaataaaaacattata 306  Q
    ||||||           |||||||||||||||||||||||||||||    
T  40095843 tttctgtttttttttttgtgtaaaaaataagaataaaaacattata 40095888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 305 - 480
Target Start/End: Original strand, 11830409 - 11830582
Alignment:
Q  305 taaacgttagttacttgttagtgttaactcttagtactgatgtgttcnnnnnnnggatatagtgattcttttttgaatcgatatagtatagcactaacaa 404  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||       ||||||| || |||||||||| ||||||||||||||||||||||||    
T  11830409 taaacgttagttacttgttagtgttaactcttagtactgacgtgttctttttt-ggatataatgcttcttttttggatcgatatagtatagcactaacaa 11830507  T
Q  405 gttccttttggatatagtgtagcattgatgtataacactgctggtgctctttttggtatatattgcgtatgtaatt 480  Q
    |||||||||||||||| ||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||    
T  11830508 gttccttttggatataatgtagcattgatgtatagcactgatggtgctcttttt-gtatatattgcgtatgtaatt 11830582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 76 - 267
Target Start/End: Original strand, 42896997 - 42897178
Alignment:
Q  76 tgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatacttttcgatacgtatccggagagtatccaaatattaa 175  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||    
T  42896997 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacttcccgatacgtatccggagagtatccaaatattaa 42897096  T
Q  176 attttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtgttttttatattattttgatttctg 267  Q
    ||||||       || || |||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||||    
T  42897097 attttatttttttaaaaaataattatccgatacttt----------ccgatacgcacggatacttgtgttttttatattattttgatttctg 42897178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 76 - 267
Target Start/End: Original strand, 11829684 - 11829887
Alignment:
Q  76 tgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgata-----------cttttcgatacgtatccggagagtat 164  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||           |||  | |||||||||||||||||||    
T  11829684 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatatctgcctgatacttcccaatacgtatccggagagtat 11829783  T
Q  165 ccaaatattaaattttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtg-ttttttatattattttgatt 263  Q
    |||||||||||||||||       || || |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  11829784 ccaaatattaaattttatttttaaaaaaaataattatccgatactttccgatacgtcccgatacgcacggatacttgtgtttttttatattattttgatt 11829883  T
Q  264 tctg 267  Q
    ||||    
T  11829884 tctg 11829887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 75 - 267
Target Start/End: Original strand, 38262993 - 38263196
Alignment:
Q  75 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac-----------ttttcgatacgtatccggagagta 163  Q
    ||||||||||||||||||| ||||||||||||||||||||| | |||||||||||||||||||||           ||| ||||||||||||||||||||    
T  38262993 ctgtgaagccccgatacttcaaaatggatgacgtaccgtattctctgcgtatcctgcatcgatacctgcccgatactttccgatacgtatccggagagta 38263092  T
Q  164 tccaaatattaaattttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtgttttttatattattttgatt 263  Q
    ||||||||||||||||||       || || |||||||| ||||||||||||||| || ||||||||||||||||||||||| |||||||||||||||||    
T  38263093 tccaaatattaaattttatttttttaaaaaataattatctgatactttccgatacgtctcgatacgcacggatacttgtgttctttatattattttgatt 38263192  T
Q  264 tctg 267  Q
    ||||    
T  38263193 tctg 38263196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 305 - 480
Target Start/End: Complemental strand, 27397514 - 27397342
Alignment:
Q  305 taaacgttagttacttgttagtgttaactcttagtactgatgtgttcnnnnnnnggatatagtgattcttttttgaatcgatatagtatagcactaacaa 404  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||        ||||||| || |||||||||| ||||||||| ||||||||||||||    
T  27397514 taaatgttagttacttgttagtgttaactcttagtactgatgtttt--ttttttggatataatgcttcttttttggatcgatatattatagcactaacaa 27397417  T
Q  405 gttccttttggatatagtgtagcattgatgtataacactgctggtgctctttttggtatatattgcgtatgtaatt 480  Q
    |||||||||| ||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||    
T  27397416 gttccttttgaatatagtgtagcattgatgtatagcactgatggtgctcttttt-gtatatattgcgtatgtaatt 27397342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 74 - 264
Target Start/End: Original strand, 39520793 - 39520974
Alignment:
Q  74 gctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatacttttcgatacgtatccggagagtatccaaatatt 173  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||    
T  39520793 gctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacttcccgatacgtatccggagagtatccaaatatt 39520892  T
Q  174 aaattttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtg-ttttttatattattttgattt 264  Q
    ||||||||        | || ||||||          ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  39520893 aaattttattttttttaaaaataatta----------tccgatacatcccgatacgcacggatacttgtgtttttttatattatttttattt 39520974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 359 - 480
Target Start/End: Complemental strand, 1042925 - 1042803
Alignment:
Q  359 ggatatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatgtataacactgctggtgctctttt 457  Q
    |||||||||| |||||||||| |||||||||||||| ||||||||| |||||||||||||||| | ||||||||||||||||||||| ||||||||||||    
T  1042925 ggatatagtgcttcttttttggatcgatatagtataacactaacaatgttccttttggatataatatagcattgatgtataacactgatggtgctctttt 1042826  T
Q  458 tggtatatattgcgtatgtaatt 480  Q
    |||||||| ||||||||||||||    
T  1042825 tggtatattttgcgtatgtaatt 1042803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 75 - 264
Target Start/End: Complemental strand, 47238728 - 47238537
Alignment:
Q  75 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgata-cttttcgatacgtatccggagagtatccaaatatt 173  Q
    ||||||||||||||||||| ||||||||||| ||| ||||||||||||||||  |||| ||||| ||   ||||| ||||| ||||||||||||||||||    
T  47238728 ctgtgaagccccgatacttcaaaatggatgatgtatcgtatcccctgcgtatattgcaccgatacctgcccgatatgtatctggagagtatccaaatatt 47238629  T
Q  174 aaattttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtg-ttttttatattattttgattt 264  Q
    ||||||||       || || ||||||||||| ||||||| |||| |||||||||||| ||||||||||| |||||||||||||||||||||    
T  47238628 aaattttatttttttaaaaaataattatccgacactttccaatacgtcccgatacgcaaggatacttgtgtttttttatattattttgattt 47238537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 359 - 480
Target Start/End: Complemental strand, 26773438 - 26773316
Alignment:
Q  359 ggatatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatgtataacactgctggtgctctttt 457  Q
    ||||||| || |||||||||| |||||||||||||||||||||||| ||||| |||||||||||| ||||||||||||||||||||  ||||||||||||    
T  26773438 ggatataatgcttcttttttggatcgatatagtatagcactaacaatgttccgtttggatatagtatagcattgatgtataacactaatggtgctctttt 26773339  T
Q  458 tggtatatattgcgtatgtaatt 480  Q
    |||||||| ||||||||||||||    
T  26773338 tggtatattttgcgtatgtaatt 26773316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 359 - 478
Target Start/End: Original strand, 8029070 - 8029190
Alignment:
Q  359 ggatatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatgtataacactgctggtgctctttt 457  Q
    |||||||||  |||||||||||||||||||| |||||||||||||| ||| ||||| |||||||| ||||||||||||||||||||| ||||||||||||    
T  8029070 ggatatagtacttcttttttgaatcgatatactatagcactaacaatgtttcttttagatatagtatagcattgatgtataacactgatggtgctctttt 8029169  T
Q  458 tggtatatattgcgtatgtaa 478  Q
    |||||||| ||||||||||||    
T  8029170 tggtatattttgcgtatgtaa 8029190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 359 - 480
Target Start/End: Complemental strand, 47238095 - 47237974
Alignment:
Q  359 ggatatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatgtataacactgctggtgctctttt 457  Q
    |||||||||| |||||||||||||||||||||||||||| |||||| || |||||||||| |||| ||||||||||||||| ||||| ||||||||||||    
T  47238095 ggatatagtgcttcttttttgaatcgatatagtatagcattaacaatgtcccttttggatgtagt-tagcattgatgtatagcactggtggtgctctttt 47237997  T
Q  458 tggtatatattgcgtatgtaatt 480  Q
    |||||||| ||||||||||||||    
T  47237996 tggtatattttgcgtatgtaatt 47237974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 83 - 266
Target Start/End: Complemental strand, 36202891 - 36202717
Alignment:
Q  83 ccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgat-acttttcgatacgtatccggagagtatccaaatattaaatttta 181  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||  ||   ||||||||||||||||||||||||||||||||||||||    
T  36202891 ccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatgcctgcccgatacgtatccggagagtatccaaatattaaatttta 36202792  T
Q  182 nnnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtgttttttatattattttgatttct 266  Q
           || || |||||||| ||||||||          ||||||||||| |||||||||||| ||||||||||||||||||||    
T  36202791 tttttttaaaaaataattatctgatacttt----------ccgatacgcacagatacttgtgttctttatattattttgatttct 36202717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 359 - 480
Target Start/End: Complemental strand, 16564098 - 16563978
Alignment:
Q  359 ggatatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatgtataacactgctggtgctctttt 457  Q
    |||||||||| |||||||||| ||||||||||||||||| |||||| |||||||||||||||||| ||| ||||||  ||||||||| ||||||||||||    
T  16564098 ggatatagtgcttcttttttggatcgatatagtatagcattaacaatgttccttttggatatagtatagtattgat--ataacactgatggtgctctttt 16564001  T
Q  458 tggtatatattgcgtatgtaatt 480  Q
    |||||||| ||||||||||||||    
T  16564000 tggtatattttgcgtatgtaatt 16563978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 359 - 480
Target Start/End: Original strand, 16601564 - 16601684
Alignment:
Q  359 ggatatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatgtataacactgctggtgctctttt 457  Q
    |||||||||| |||||||||| ||||||||||||||||| |||||| |||||||||||||||||| ||| ||||||  ||||||||| ||||||||||||    
T  16601564 ggatatagtgcttcttttttggatcgatatagtatagcattaacaatgttccttttggatatagtatagtattgat--ataacactgatggtgctctttt 16601661  T
Q  458 tggtatatattgcgtatgtaatt 480  Q
    |||||||| ||||||||||||||    
T  16601662 tggtatattttgcgtatgtaatt 16601684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 75 - 254
Target Start/End: Complemental strand, 26773833 - 26773643
Alignment:
Q  75 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgca-----------tcgatacttttcgatacgtatccggagagta 163  Q
    ||||||||||||||||||||||||| ||||||||| |||||||| |||||||||||||            |||||||| |||||||||||| ||||||||    
T  26773833 ctgtgaagccccgatactttaaaattgatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatacttctcgatacgtatcgggagagta 26773734  T
Q  164 tccaaatattaaattttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtgttttttatatt 254  Q
    ||||||||||||||||||       |  || ||||| || |||||||||| |||||||| ||||||||| |||||||||||||||| ||||    
T  26773733 tccaaatattaaattttattttttaagaaaataattttctgatactttccaatacatcctgatacgcacagatacttgtgttttttttatt 26773643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 78 - 267
Target Start/End: Complemental strand, 16564476 - 16564297
Alignment:
Q  78 tgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatacttttcgatacgtatccggagagtatccaaatattaaat 177  Q
    ||||| |||||||||| |||||||||||||||||||||||||||||||||||||            ||||||||||| ||||||||||||||||||||||    
T  16564476 tgaagtcccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgc----------cccgatacgtatcgggagagtatccaaatattaaat 16564387  T
Q  178 tttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtgtttt-ttatattattttgatttctg 267  Q
    ||||       |  || ||||| |  ||||||||||||||| ||||||||||||||||||||| |||||| ||||||||| ||||||||||    
T  16564386 tttattttttaataaaataatt-tatgatactttccgatacgtcccgatacgcacggatacttatgttttattatattatattgatttctg 16564297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 78 - 267
Target Start/End: Original strand, 16601186 - 16601365
Alignment:
Q  78 tgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatacttttcgatacgtatccggagagtatccaaatattaaat 177  Q
    ||||| |||||||||| |||||||||||||||||||||||||||||||||||||            ||||||||||| ||||||||||||||||||||||    
T  16601186 tgaagtcccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgc----------cccgatacgtatcgggagagtatccaaatattaaat 16601275  T
Q  178 tttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtgtttt-ttatattattttgatttctg 267  Q
    ||||       |  || ||||| |  ||||||||||||||| ||||||||||||||||||||| |||||| ||||||||| ||||||||||    
T  16601276 tttattttttaataaaataatt-tatgatactttccgatacgtcccgatacgcacggatacttatgttttattatattatattgatttctg 16601365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 78 - 267
Target Start/End: Complemental strand, 27398165 - 27397975
Alignment:
Q  78 tgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgca-----------tcgatacttttcgatacgtatccggagagtatcc 166  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||||||           |||||||||| | ||| |||||||||||||||||    
T  27398165 tgaagcccggatactttaaaatggatgacgtactgtatcccctgcgtatcctgcactgatacctgctcgatactttccaatatgtatccggagagtatcc 27398066  T
Q  167 aaatattaaattttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtgttttttatattattttgatttct 266  Q
    |||||||||||||||       || || ||||||          |||||||| || | ||||||||||||||||||||||||||||||||||||||||||    
T  27398065 aaatattaaattttatttttaaaaaaaataatta----------tccgatacgtctcaatacgcacggatacttgtgttttttatattattttgatttct 27397976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 78 - 181
Target Start/End: Complemental strand, 1043189 - 1043075
Alignment:
Q  78 tgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcg-----------atacttttcgatacgtatccggagagtatcc 166  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||           ||||||| ||||||||||| |||||||||||    
T  1043189 tgaagccccgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcatcgatacctgcctgatactttccgatacgtatcgggagagtatcc 1043090  T
Q  167 aaatattaaatttta 181  Q
    |||||||||||||||    
T  1043089 aaatattaaatttta 1043075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 374 - 480
Target Start/End: Original strand, 4291946 - 4292051
Alignment:
Q  374 tttttgaatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatgtataacactgctggtgctctttttggtatatattgcgt 472  Q
    |||||| |||||||||||||| || |||||| |||||||||||||||||| ||||||||||  ||||||||| || ||||||||||||||||| ||||||    
T  4291946 tttttggatcgatatagtataacattaacaatgttccttttggatatagtatagcattgat--ataacactgatgatgctctttttggtatattttgcgt 4292043  T
Q  473 atgtaatt 480  Q
    ||||||||    
T  4292044 atgtaatt 4292051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 75 - 181
Target Start/End: Original strand, 25969391 - 25969508
Alignment:
Q  75 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgca-----------tcgatacttttcgatacgtatccggagagta 163  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||            ||||||||  ||||||||||||||||||||    
T  25969391 ctgtgaagccccgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagta 25969490  T
Q  164 tccaaatattaaatttta 181  Q
    ||||||||||||||||||    
T  25969491 tccaaatattaaatttta 25969508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 207 - 267
Target Start/End: Complemental strand, 26843971 - 26843911
Alignment:
Q  207 actttccgatacatcccgatacgcacggatacttgtgttttttatattattttgatttctg 267  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  26843971 actttccgatacatcccgatccgcacggatacttgtgttttttatattattttgatttctg 26843911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 75 - 181
Target Start/End: Complemental strand, 555001 - 554894
Alignment:
Q  75 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatacttttc-gatacgtatccggagagtatccaaatatt 173  Q
    |||||||||||||||||| |||||| ||||||||| ||||||||||| |||||||||| |||||| || | |||||||||| ||||||||| | || |||    
T  555001 ctgtgaagccccgatactctaaaatagatgacgtatcgtatcccctgtgtatcctgcaccgataccttcctgatacgtatcaggagagtattcgaagatt 554902  T
Q  174 aaatttta 181  Q
    ||||||||    
T  554901 aaatttta 554894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 76 - 139
Target Start/End: Original strand, 4291507 - 4291570
Alignment:
Q  76 tgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac 139  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  4291507 tgtgaagccccgatactttaaaatggatgatgtaccgtatcccctgcgtatcctgcaccgatac 4291570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 73 - 266
Target Start/End: Complemental strand, 34122740 - 34122546
Alignment:
Q  73 ggctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac-----------ttttcgatacgtatccggagag 161  Q
    |||| |||||||  ||||||| ||||||||||||||||||||||| |||||||||||||| ||||||           ||  ||||||||||| ||||||    
T  34122740 ggctatgaagcctagatacttcaaaatggatgacgtaccgtatcctctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatctggagag 34122641  T
Q  162 tatccaaatattaaattttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtgttttttatattattttga 261  Q
    ||||||||||||||||||||        | || ||||||||| ||||          ||||||||||||| |||||||||||||||||||||||||||||    
T  34122640 tatccaaatattaaattttattttttttaaaaataattatccaatac----------atcccgatacgcatggatacttgtgttttttatattattttga 34122551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 78 - 166
Target Start/End: Complemental strand, 15878462 - 15878374
Alignment:
Q  78 tgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatacttttcgatacgtatccggagagtatcc 166  Q
    |||||||||||||||| |||| |||||| |||||||||||||| ||||||||  | ||||||||| ||||||||||| |||||||||||    
T  15878462 tgaagccccgatacttcaaaacggatgatgtaccgtatcccctacgtatcctataccgatactttccgatacgtatcaggagagtatcc 15878374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 359 - 422
Target Start/End: Complemental strand, 19820855 - 19820791
Alignment:
Q  359 ggatatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagt 422  Q
    |||||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  19820855 ggatatagtgcttctttttcgaatcgatatagtatagcactaacaatgttccttttggatatagt 19820791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 359 - 434
Target Start/End: Complemental strand, 23078966 - 23078890
Alignment:
Q  359 ggatatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatg 434  Q
    |||||||||| |||||||||| |||||||||||||||||||||||| ||||||||| |||||||| ||||| |||||    
T  23078966 ggatatagtgcttcttttttggatcgatatagtatagcactaacaatgttcctttttgatatagtatagcactgatg 23078890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 76 - 139
Target Start/End: Complemental strand, 23079160 - 23079097
Alignment:
Q  76 tgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac 139  Q
    |||| ||||||||||||| |||||||||||| ||||||||||||||||||||||| ||||||||    
T  23079160 tgtgtagccccgatacttcaaaatggatgacataccgtatcccctgcgtatcctggatcgatac 23079097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 362 - 428
Target Start/End: Complemental strand, 23970002 - 23969935
Alignment:
Q  362 tatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagtgtagca 428  Q
    ||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||    
T  23970002 tatagtgcttcttttttggatcgatatagtatagcactaacaatgttccttttggatatagtatagca 23969935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 362 - 428
Target Start/End: Original strand, 48153784 - 48153851
Alignment:
Q  362 tatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagtgtagca 428  Q
    ||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||    
T  48153784 tatagtgcttcttttttggatcgatatagtatagcactaacaatgttccttttggatatagtatagca 48153851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 418 - 480
Target Start/End: Original strand, 39521396 - 39521458
Alignment:
Q  418 atagtgtagcattgatgtataacactgctggtgctctttttggtatatattgcgtatgtaatt 480  Q
    |||||||||||||||||||||||| || || |||||||||| |||||||||||||||||||||    
T  39521396 atagtgtagcattgatgtataacagtgatgatgctcttttttgtatatattgcgtatgtaatt 39521458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 89 - 181
Target Start/End: Complemental strand, 9250529 - 9250426
Alignment:
Q  89 tactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac-----------ttttcgatacgtatccggagagtatccaaatattaaat 177  Q
    ||||| ||||||||||||||| |||||||||||||||||||||| ||||||           ||  ||||||||||||||||||||||||||||||||||    
T  9250529 tacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagtatccaaatattaaat 9250430  T
Q  178 ttta 181  Q
    ||||    
T  9250429 ttta 9250426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 76 - 132
Target Start/End: Original strand, 33454065 - 33454121
Alignment:
Q  76 tgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgca 132  Q
    ||||||||||||||| || ||||||||||||||| ||||||||||||||||||||||    
T  33454065 tgtgaagccccgatatttcaaaatggatgacgtatcgtatcccctgcgtatcctgca 33454121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 76 - 132
Target Start/End: Complemental strand, 44960255 - 44960199
Alignment:
Q  76 tgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgca 132  Q
    |||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  44960255 tgtgaagctccgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgca 44960199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 75 - 138
Target Start/End: Original strand, 11058346 - 11058409
Alignment:
Q  75 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgata 138  Q
    |||||||| || | ||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  11058346 ctgtgaagtccaggtacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgata 11058409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 361 - 434
Target Start/End: Complemental strand, 1400123 - 1400049
Alignment:
Q  361 atatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatg 434  Q
    |||||||| |||||||||  |||||||||||||| ||||||||| |||||||||||||||||| || ||||||||    
T  1400123 atatagtgtttcttttttagatcgatatagtataacactaacaatgttccttttggatatagtataacattgatg 1400049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 222 - 264
Target Start/End: Original strand, 8028829 - 8028871
Alignment:
Q  222 ccgatacgcacggatacttgtgttttttatattattttgattt 264  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  8028829 ccgatacgcacggatacttgtgttttttatattattttgattt 8028871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 362 - 422
Target Start/End: Original strand, 26973296 - 26973357
Alignment:
Q  362 tatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagt 422  Q
    ||||||| |||||||||| |||||||||||||||||||||||| ||| ||||||||||||||    
T  26973296 tatagtgcttcttttttggatcgatatagtatagcactaacaatgtttcttttggatatagt 26973357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 211 - 267
Target Start/End: Original strand, 36660608 - 36660665
Alignment:
Q  211 tccgatacatcccgatacgcacggatacttgtg-ttttttatattattttgatttctg 267  Q
    |||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  36660608 tccgatacgtcccgatacacacggatacttgtgtttttttatattattttgatttctg 36660665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 209 - 264
Target Start/End: Original strand, 4291630 - 4291686
Alignment:
Q  209 tttccgatacatcccgatacgcacggatacttgtg-ttttttatattattttgattt 264  Q
    |||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||    
T  4291630 tttccgatacgtcccgatacgcatggatacttgtgtttttttatattattttgattt 4291686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 359 - 434
Target Start/End: Original strand, 33454328 - 33454404
Alignment:
Q  359 ggatatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatg 434  Q
    |||||||||| |||||||||| |||||||||||||| ||||||||| |||| ||||||||||| | ||||| |||||    
T  33454328 ggatatagtgcttcttttttggatcgatatagtataacactaacaatgttcattttggatataatatagcactgatg 33454404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 359 - 437
Target Start/End: Original strand, 19510886 - 19510965
Alignment:
Q  359 ggatatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatgtat 437  Q
    |||||||||| |||||| ||| ||||||||| |||| ||||| ||| |||||||||||||||||| || |||||||||||    
T  19510886 ggatatagtgcttctttcttggatcgatataatataacactagcaatgttccttttggatatagtataacattgatgtat 19510965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 86 - 215
Target Start/End: Complemental strand, 26846006 - 26845866
Alignment:
Q  86 cgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcg-----------atacttttcgatacgtatccggagagtatccaaatatta 174  Q
    |||||||| ||||||||||| |||||||||| | ||||||||||||| ||           ||||||  ||||||||||  |||||||||||||||||||    
T  26846006 cgatacttcaaaatggatgatgtaccgtatctcatgcgtatcctgcaccgatacctgcccaatacttcccgatacgtatttggagagtatccaaatatta 26845907  T
Q  175 aattttannnnnnnaagaactaattatccgatactttccga 215  Q
    |||||||       || || |||||||||||||||||||||    
T  26845906 aattttatttttaaaaaaaataattatccgatactttccga 26845866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 76 - 180
Target Start/End: Original strand, 26973062 - 26973163
Alignment:
Q  76 tgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatacttttcgatacgtatccggagagtatccaaatattaa 175  Q
    |||||||||| ||||||||||||| | ||||||| ||||||||||| |||   || |  |||||||||||||||||||| | ||||||||| || |||||    
T  26973062 tgtgaagccctgatactttaaaatagttgacgtatcgtatcccctgtgta--atg-actgatacttttcgatacgtatcagaagagtatccgaagattaa 26973158  T
Q  176 atttt 180  Q
    |||||    
T  26973159 atttt 26973163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 362 - 422
Target Start/End: Original strand, 36413609 - 36413669
Alignment:
Q  362 tatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagt 422  Q
    ||||||| ||||||||||| ||||||||||||| ||||||||| ||||||||||||||||||    
T  36413609 tatagtgcttcttttttga-tcgatatagtataacactaacaatgttccttttggatatagt 36413669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 76 - 132
Target Start/End: Original strand, 19510518 - 19510574
Alignment:
Q  76 tgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgca 132  Q
    |||||| ||||||||||| ||||||||||||||| ||||||||||| ||||| ||||    
T  19510518 tgtgaaaccccgatacttcaaaatggatgacgtatcgtatcccctgtgtatcatgca 19510574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 76 - 132
Target Start/End: Original strand, 38064590 - 38064646
Alignment:
Q  76 tgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgca 132  Q
    ||||||||||||||||||||||||||||||| || |||||| | |||||||| ||||    
T  38064590 tgtgaagccccgatactttaaaatggatgacataacgtatctcatgcgtatcatgca 38064646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 370 - 428
Target Start/End: Original strand, 21409637 - 21409696
Alignment:
Q  370 ttcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagtgtagca 428  Q
    |||||||||| ||||||||||||||||||||||||  || |||||||||||||| |||||    
T  21409637 ttcttttttggatcgatatagtatagcactaacaatatttcttttggatatagtatagca 21409696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 78 - 141
Target Start/End: Original strand, 35159862 - 35159925
Alignment:
Q  78 tgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatactt 141  Q
    |||||| ||||||||| ||||||||||| ||| |||||||||||| ||| ||||| ||||||||    
T  35159862 tgaagctccgatacttcaaaatggatgatgtatcgtatcccctgcatattctgcaccgatactt 35159925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 359 - 428
Target Start/End: Original strand, 38064928 - 38064999
Alignment:
Q  359 ggatatagtgattctttttt-gaatcgatatagtatagcactaacaa-gttccttttggatatagtgtagca 428  Q
    |||||||||| ||||||||| | ||||||||| |||| ||||||||| |||||||||||||||||| |||||    
T  38064928 ggatatagtgcttctttttttggatcgatataatataacactaacaatgttccttttggatatagtatagca 38064999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 360 - 422
Target Start/End: Original strand, 44269979 - 44270042
Alignment:
Q  360 gatatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagt 422  Q
    ||||| ||| |||||||||  |||||||||||||| ||||||||| ||||||||||||||||||    
T  44269979 gatatggtgcttcttttttttatcgatatagtataacactaacaatgttccttttggatatagt 44270042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 361 - 422
Target Start/End: Complemental strand, 15878279 - 15878217
Alignment:
Q  361 atatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagt 422  Q
    |||||||| |||||||||  |||||||||||||| ||||||||| |||| |||||||||||||    
T  15878279 atatagtgtttcttttttagatcgatatagtataacactaacaatgttcattttggatatagt 15878217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 363 - 428
Target Start/End: Original strand, 35160124 - 35160194
Alignment:
Q  363 atagtgattcttttttgaatcgatatagtatagcactaa----caa-gttccttttggatatagtgtagca 428  Q
    |||||| |||||||||| |||||||||||||||||||||    ||| |||||||||||||||||| |||||    
T  35160124 atagtgcttcttttttggatcgatatagtatagcactaattaacaatgttccttttggatatagtatagca 35160194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 47720213 - 47720176
Alignment:
Q  144 cgatacgtatccggagagtatccaaatattaaatttta 181  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  47720213 cgatacgtatccggagagtatccgaatattaaatttta 47720176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 145 - 181
Target Start/End: Original strand, 8028772 - 8028808
Alignment:
Q  145 gatacgtatccggagagtatccaaatattaaatttta 181  Q
    |||||||||| ||||||||||||||||||||||||||    
T  8028772 gatacgtatcgggagagtatccaaatattaaatttta 8028808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 222 - 266
Target Start/End: Original strand, 19510655 - 19510699
Alignment:
Q  222 ccgatacgcacggatacttgtgttttttatattattttgatttct 266  Q
    ||||| |||||| || |||||||||||||||||||||||||||||    
T  19510655 ccgatgcgcacgaattcttgtgttttttatattattttgatttct 19510699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 78 - 138
Target Start/End: Complemental strand, 36758114 - 36758054
Alignment:
Q  78 tgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgata 138  Q
    ||||||||| |||||| |||||| |||| ||| |||||||||||||||| ||||| |||||    
T  36758114 tgaagccccaatacttcaaaatgaatgatgtatcgtatcccctgcgtattctgcaccgata 36758054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 78 - 138
Target Start/End: Complemental strand, 36767638 - 36767578
Alignment:
Q  78 tgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgata 138  Q
    ||||||||| |||||| |||||| |||| ||| |||||||||||||||| ||||| |||||    
T  36767638 tgaagccccaatacttcaaaatgaatgatgtatcgtatcccctgcgtattctgcaccgata 36767578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 359 - 434
Target Start/End: Complemental strand, 36763652 - 36763572
Alignment:
Q  359 ggatatagtgattcttttttgaatcgatatagtatagcactaa----caa-gttccttttggatatagtgtagcattgatg 434  Q
    ||||||||||  ||||||||| |||||||||||||| ||||||    ||| |||||||||||||||||| ||||| |||||    
T  36763652 ggatatagtgcctcttttttggatcgatatagtataacactaattaacaatgttccttttggatatagtatagcactgatg 36763572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 362 - 404
Target Start/End: Complemental strand, 554766 - 554724
Alignment:
Q  362 tatagtgattcttttttgaatcgatatagtatagcactaacaa 404  Q
    ||||||| |||||||||| |||||||||||||| |||||||||    
T  554766 tatagtgcttcttttttggatcgatatagtataacactaacaa 554724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 135 - 181
Target Start/End: Complemental strand, 1363062 - 1363016
Alignment:
Q  135 gatacttttcgatacgtatccggagagtatccaaatattaaatttta 181  Q
    ||||||| |||||||||||| ||||||||||| ||||| ||||||||    
T  1363062 gatacttctcgatacgtatcaggagagtatccgaatatgaaatttta 1363016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 434 - 480
Target Start/End: Complemental strand, 9250105 - 9250059
Alignment:
Q  434 gtataacactgctggtgctctttttggtatatattgcgtatgtaatt 480  Q
    ||||| ||||| || ||||||||||||||||||||| ||||||||||    
T  9250105 gtatatcactgatgatgctctttttggtatatattgtgtatgtaatt 9250059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 434 - 480
Target Start/End: Complemental strand, 9283655 - 9283609
Alignment:
Q  434 gtataacactgctggtgctctttttggtatatattgcgtatgtaatt 480  Q
    ||||| ||||| || ||||||||||||||||||||| ||||||||||    
T  9283655 gtatatcactgatgatgctctttttggtatatattgtgtatgtaatt 9283609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 434 - 480
Target Start/End: Complemental strand, 15878218 - 15878172
Alignment:
Q  434 gtataacactgctggtgctctttttggtatatattgcgtatgtaatt 480  Q
    ||||||||||| || |||||||||||| |||||||| ||||||||||    
T  15878218 gtataacactgatgatgctctttttgggatatattgtgtatgtaatt 15878172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 434 - 480
Target Start/End: Original strand, 25969828 - 25969874
Alignment:
Q  434 gtataacactgctggtgctctttttggtatatattgcgtatgtaatt 480  Q
    ||||| ||||| || ||||||||||||||||||||| ||||||||||    
T  25969828 gtatatcactgatgatgctctttttggtatatattgtgtatgtaatt 25969874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 446 - 480
Target Start/End: Original strand, 38065003 - 38065037
Alignment:
Q  446 tggtgctctttttggtatatattgcgtatgtaatt 480  Q
    ||||||||||||||| |||||||||||||||||||    
T  38065003 tggtgctctttttgggatatattgcgtatgtaatt 38065037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 75 - 132
Target Start/End: Original strand, 21409385 - 21409442
Alignment:
Q  75 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgca 132  Q
    |||||||||||  |||||| ||||||||||||||| |||||| ||||  |||||||||    
T  21409385 ctgtgaagccctcatacttaaaaatggatgacgtatcgtatctcctgtatatcctgca 21409442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 181
Target Start/End: Original strand, 21409465 - 21409502
Alignment:
Q  144 cgatacgtatccggagagtatccaaatattaaatttta 181  Q
    ||||||||||| |||||||||||||| |||||||||||    
T  21409465 cgatacgtatcaggagagtatccaaagattaaatttta 21409502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 181
Target Start/End: Original strand, 36660552 - 36660589
Alignment:
Q  144 cgatacgtatccggagagtatccaaatattaaatttta 181  Q
    |||||||||||| |||||||| ||||||||||||||||    
T  36660552 cgatacgtatccagagagtattcaaatattaaatttta 36660589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 434
Target Start/End: Complemental strand, 36757871 - 36757793
Alignment:
Q  361 atatagtgattcttttttgaatcgatatagtatagcac----taacaa-gttccttttggatatagtgtagcattgatg 434  Q
    |||||||| || ||||||| |||||||||||||| |||    |||||| |||||||||||||||||| ||||| |||||    
T  36757871 atatagtgcttattttttggatcgatatagtataacactgattaacaatgttccttttggatatagtatagcactgatg 36757793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 434
Target Start/End: Complemental strand, 36767395 - 36767317
Alignment:
Q  361 atatagtgattcttttttgaatcgatatagtatagcac----taacaa-gttccttttggatatagtgtagcattgatg 434  Q
    |||||||| || ||||||| |||||||||||||| |||    |||||| |||||||||||||||||| ||||| |||||    
T  36767395 atatagtgcttattttttggatcgatatagtataacactgattaacaatgttccttttggatatagtatagcactgatg 36767317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 278 - 306
Target Start/End: Complemental strand, 34122514 - 34122486
Alignment:
Q  278 gtgtaaaaaataagaataaaaacattata 306  Q
    |||||||||||||||||||||||||||||    
T  34122514 gtgtaaaaaataagaataaaaacattata 34122486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 38064659 - 38064703
Alignment:
Q  134 cgatacttttcgatacgtatccggagagtatccaaatattaaatt 178  Q
    ||||||||| ||||||||||| ||||||||||| || ||||||||    
T  38064659 cgatactttccgatacgtatcaggagagtatccgaagattaaatt 38064703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 84 - 132
Target Start/End: Original strand, 44269729 - 44269777
Alignment:
Q  84 cccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgca 132  Q
    |||||||||| || ||||||||||||| ||||||| ||| |||||||||    
T  44269729 cccgatacttcaagatggatgacgtacggtatcccgtgcatatcctgca 44269777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 87 - 139
Target Start/End: Original strand, 48153620 - 48153672
Alignment:
Q  87 gatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac 139  Q
    ||||||||||||||||||| ||| ||||||| || ||||| ||||| ||||||    
T  48153620 gatactttaaaatggatgatgtatcgtatcctctccgtattctgcaccgatac 48153672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 248; Significance: 1e-137; HSPs: 75)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 71 - 484
Target Start/End: Complemental strand, 22201462 - 22201038
Alignment:
Q  71 ttggctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac-----------ttttcgatacgtatccggag 159  Q
    |||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||||| ||||||           ||| ||||||||||||||||    
T  22201462 ttggctgtgaagtcccgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcaccgatacctgcccgatactttccgatacgtatccggag 22201363  T
Q  160 agtatccaaatattaaattttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtgtttttt-atattattt 258  Q
    ||||||||||||||||||||||       || || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  22201362 agtatccaaatattaaattttatttttttaaaaaataattatccgatactttccgatacatcccgatacgcacggatacttgtgtttttttatattattt 22201263  T
Q  259 tgatttctgnnnnnnnnnngtgtaaaaaataagaataaaaacattataaacgttagttacttgttagtgttaactcttagtactgatgtgttcnnnnnnn 358  Q
    ||||||||           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||           
T  22201262 tgatttct-atttttttttgtgtaaaaaataaaaataaaaacattataaacgttagttacttgttagtgttaactcttagtactgatgtgttcttttttt 22201164  T
Q  359 ggatatagtgattcttttttgaatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatgtataacactgctggtgctcttttt 458  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  22201163 ggatatagtgattcttttttggatcgatatagtatagtactaacaagtttcttttggatatagtgtagcattgatgtataacactgttggtgctattttt 22201064  T
Q  459 ggtatatattgcgtatgtaattacct 484  Q
    ||||||||||||||||||||||||||    
T  22201063 ggtatatattgcgtatgtaattacct 22201038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 306 - 479
Target Start/End: Original strand, 5540142 - 5540315
Alignment:
Q  306 aaacgttagttacttgttagtgttaactcttagtactgatgtgttcnnnnnnnggatatagtgattcttttttgaatcgatatagtatagcactaacaag 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||| ||||||||| |||||||||||||||    
T  5540142 aaacgttagttacttgttagtgttaactcttagtactgatgtgttctttttttggatatagtgattcttttttggatcgatataatatagcactaacaag 5540241  T
Q  406 ttccttttggatatagtgtagcattgatgtataacactgctggtgctctttttggtatatattgcgtatgtaat 479  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| |||||||||    
T  5540242 ttccttttggatatagtgtagcattgatgtataacactgatgatgctctttttggtatatattgtgtatgtaat 5540315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 305 - 480
Target Start/End: Original strand, 4246648 - 4246823
Alignment:
Q  305 taaacgttagttacttgttagtgttaactcttagtactgatgtgttcnnnnnnnggatatagtgattcttttttgaatcgatatagtatagcactaacaa 404  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||| |||||||||||||| |||||||||    
T  4246648 taaacgtcagttacttgttagtgttaactcttagtactgatgtgttctttttttggatatagtgattcttttttggatcgatatagtatatcactaacaa 4246747  T
Q  405 gttccttttggatatagtgtagcattgatgtataacactgctggtgctctttttggtatatattgcgtatgtaatt 480  Q
    |||| |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  4246748 gttcattttggatatagtgtagcattgatgtataacaatgatggtgctctttttggtatatattgcgtatgtaatt 4246823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 305 - 480
Target Start/End: Complemental strand, 45216619 - 45216444
Alignment:
Q  305 taaacgttagttacttgttagtgttaactcttagtactgatgtgttcnnnnnnnggatatagtgattcttttttgaatcgatatagtatagcactaacaa 404  Q
    |||||||||||||||||||||||||||||||||||||||||||||||       ||||||| ||||||||||||| |||||||||||||| |||||||||    
T  45216619 taaacgttagttacttgttagtgttaactcttagtactgatgtgttctttttttggatataatgattcttttttggatcgatatagtataacactaacaa 45216520  T
Q  405 gttccttttggatatagtgtagcattgatgtataacactgctggtgctctttttggtatatattgcgtatgtaatt 480  Q
    |||||||||||||||||||||||||||||||||| || || |||||||||||||||||||||||||||||||||||    
T  45216519 gttccttttggatatagtgtagcattgatgtatagcaatgatggtgctctttttggtatatattgcgtatgtaatt 45216444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 305 - 480
Target Start/End: Complemental strand, 34900768 - 34900590
Alignment:
Q  305 taaacgttagttacttgttagtgttaactcttagtactgatgtgttcnnnnnnnggatatagtgattcttttttgaatcgatatagtatagcactaacaa 404  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||| |||||||||||||| |||||||||    
T  34900768 taaacgtcagttacttgttagtgttaactcttagtactgatgtgttctttttttggatatagtgattcttttttggatcgatatagtatatcactaacaa 34900669  T
Q  405 gttccttttggatatagtgtagcattgatgtataacactgctggtgctct---ttttggtatatattgcgtatgtaatt 480  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||   ||||||||||||||||||||||||||    
T  34900668 gttcattttggatatagtgtagcattgatgtataacactgatggtgctcttaattttggtatatattgcgtatgtaatt 34900590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 305 - 480
Target Start/End: Complemental strand, 28875964 - 28875789
Alignment:
Q  305 taaacgttagttacttgttagtgttaactcttagtactgatgtgttcnnnnnnnggatatagtgattcttttttgaatcgatatagtatagcactaacaa 404  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||       ||||||||||||||||||||| ||||||||||||||||||||||||    
T  28875964 taaacgttagttacttgttagttttaactcttagtactgatgtgttctttttttggatatagtgattcttttttggatcgatatagtatagcactaacaa 28875865  T
Q  405 gttccttttggatatagtgtagcattgatgtataacactgctggtgctctttttggtatatattgcgtatgtaatt 480  Q
    ||||||||||||||||||||||||||||||| ||   ||| || ||||||||||||||||||||||||||||||||    
T  28875864 gttccttttggatatagtgtagcattgatgtttattcctgatgatgctctttttggtatatattgcgtatgtaatt 28875789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 305 - 480
Target Start/End: Original strand, 32760075 - 32760248
Alignment:
Q  305 taaacgttagttacttgttagtgttaactcttagtactgatgtgttcnnnnnnnggatatagtgattcttttttgaatcgatatagtatagcactaacaa 404  Q
    |||||||||||||||||||||||||||||||||||||||||||||||       |||||||||| |||||||||| ||||||||||||||||||||||||    
T  32760075 taaacgttagttacttgttagtgttaactcttagtactgatgtgttctttttt-ggatatagtgcttcttttttggatcgatatagtatagcactaacaa 32760173  T
Q  405 gttccttttggatatagtgtagcattgatgtataacactgctggtgctctttttggtatatattgcgtatgtaatt 480  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||| |||||||||||    
T  32760174 gttccttttggatatagtgtagcattgatgtataacactgatagtgctcttttt-gtatatatttcgtatgtaatt 32760248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 305 - 480
Target Start/End: Complemental strand, 32638612 - 32638438
Alignment:
Q  305 taaacgttagttacttgttagtgttaactcttagtactgatgtgttcnnnnnnnggatatagtgattcttttttgaatcgatatagtatagcactaacaa 404  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||       |||||||||| |||||||||| |||||||| |||||||||||||||    
T  32638612 taaacgttacttacttgttagtgttaactcttagtactcatgtgttctttttt-ggatatagtgcttcttttttggatcgatattgtatagcactaacaa 32638514  T
Q  405 gttccttttggatatagtgtagcattgatgtataacactgctggtgctctttttggtatatattgcgtatgtaatt 480  Q
    |||||||||| |||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  32638513 gttccttttgaatatagtgtagcatcgatgtatagcactgatggtgctctttttggtatatattgcgtatgtaatt 32638438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 75 - 267
Target Start/End: Complemental strand, 34901503 - 34901299
Alignment:
Q  75 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac-----------ttttcgatacgtatccggagagta 163  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||           ||| ||||||||||||||||||||    
T  34901503 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatactttccgatacgtatccggagagta 34901404  T
Q  164 tccaaatattaaattttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtgtt-ttttatattattttgat 262  Q
    || |||||||||||||||       || || ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  34901403 tctaaatattaaattttatttttttaaaaaataattatccgatactttccgatacatcccgatacgcacggatacttgtgtttttttatattattttgat 34901304  T
Q  263 ttctg 267  Q
    |||||    
T  34901303 ttctg 34901299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 305 - 480
Target Start/End: Original strand, 36484144 - 36484317
Alignment:
Q  305 taaacgttagttacttgttagtgttaactcttagtactgatgtgttcnnnnnnnggatatagtgattcttttttgaatcgatatagtatagcactaacaa 404  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||       |||||||||| |||||||||| ||||||||||||||||||||||||    
T  36484144 taaacgttagttacttgttagtgttaacttttagtactgatgtgttctttttt-ggatatagtgcttcttttttggatcgatatagtatagcactaacaa 36484242  T
Q  405 gttccttttggatatagtgtagcattgatgtataacactgctggtgctctttttggtatatattgcgtatgtaatt 480  Q
    |||||||||||||||||||||||||||||||||||||||| | |||||||||||  |||||||| |||||||||||    
T  36484243 gttccttttggatatagtgtagcattgatgtataacactgatagtgctcttttt-atatatatttcgtatgtaatt 36484317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 305 - 471
Target Start/End: Complemental strand, 12579934 - 12579770
Alignment:
Q  305 taaacgttagttacttgttagtgttaactcttagtactgatgtgttcnnnnnnnggatatagtgattcttttttgaatcgatatagtatagcactaacaa 404  Q
    |||||||||||||||||||||||||||||||||||||||||||||||       |||||||||| |||||||||| ||||||||||||||||||||||||    
T  12579934 taaacgttagttacttgttagtgttaactcttagtactgatgtgttctttttt-ggatatagtgcttcttttttggatcgatatagtatagcactaacaa 12579836  T
Q  405 gttccttttggatatagtgtagcattgatgtataacactgctggtgctctttttggtatatattgcg 471  Q
    |||||||||||||||||||||||||||||||||| ||||| | ||||||||||| ||||||||||||    
T  12579835 gttccttttggatatagtgtagcattgatgtatagcactgatagtgctcttttt-gtatatattgcg 12579770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 75 - 306
Target Start/End: Complemental strand, 43771825 - 43771581
Alignment:
Q  75 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatacttttc-----------gatacgtatccggagagta 163  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| | ||           |||||||||||||||||||    
T  43771825 ctgtgaaaccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacatgtccgatacttcctgatacgtatccggagagta 43771726  T
Q  164 tccaaatattaaattttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtgtt--ttttatattattttga 261  Q
    ||||||||||||||||||       || || ||||||||||||||||| |||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  43771725 tccaaatattaaattttatttttaaaaaaaataattatccgatactttgcgatacatcccgatacgcacggatacttgtgttttttttatattattttga 43771626  T
Q  262 tttctgnnnnnnnnnngtgtaaaaaataagaataaaaacattata 306  Q
    ||||||           ||||||||||||||||||||||||||||    
T  43771625 tttctgttttttttttttgtaaaaaataagaataaaaacattata 43771581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 75 - 267
Target Start/End: Original strand, 16384614 - 16384818
Alignment:
Q  75 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac-----------ttttcgatacgtatccggagagta 163  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| ||||||           ||  ||||||||||||| ||||||    
T  16384614 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgagtatcctgcaccgatacctgcccgatacttcccgatacgtatccgaagagta 16384713  T
Q  164 tccaaatattaaattttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtg-ttttttatattattttgat 262  Q
    ||||||||||||||||||       || || ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  16384714 tccaaatattaaattttattttttaaaaaaataattatccgatactttccgatacatcccgatacgcacggatacttgtgtttttttatattattttgat 16384813  T
Q  263 ttctg 267  Q
    |||||    
T  16384814 ttctg 16384818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 305 - 480
Target Start/End: Complemental strand, 43771113 - 43770928
Alignment:
Q  305 taaacgttagttacttgttagtgttaactcttagtactgatgtgttcnnnnnnn----------ggatatagtgattcttttttgaatcgatatagtata 394  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||                 ||||||||||||||||||||| ||||||||||||||    
T  43771113 taaacgttagttacttgttagtgttaactcttagtagtgatgtgttctttttttttttttttttggatatagtgattcttttttggatcgatatagtata 43771014  T
Q  395 gcactaacaagttccttttggatatagtgtagcattgatgtataacactgctggtgctctttttggtatatattgcgtatgtaatt 480  Q
     ||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  43771013 acactaacaagttccttttatatatagtgtagcattgatgtataacactgatggtgctctttttggtatatattgcgtatgtaatt 43770928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 75 - 267
Target Start/End: Original strand, 32759370 - 32759573
Alignment:
Q  75 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac-----------ttttcgatacgtatccggagagta 163  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||||           ||  ||||||||||| ||||||||    
T  32759370 ctgtgaagcctcgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatctggagagta 32759469  T
Q  164 tccaaatattaaattttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtgttttttatattattttgatt 263  Q
    ||||||||||||||||||       || || |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  32759470 tccaaatattaaattttatttttttaaaaaataattatccgatactttccgatacgtcccgatacgcacggatacttgtattttttatattattttgatt 32759569  T
Q  264 tctg 267  Q
    ||||    
T  32759570 tctg 32759573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 74 - 267
Target Start/End: Original strand, 13422204 - 13422409
Alignment:
Q  74 gctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac-----------ttttcgatacgtatccggagagt 162  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| ||||||           ||  |||||||||| ||||||||    
T  13422204 gctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcatatcctgcaccgatacctgcctgatacttcccgatacgtatacggagagt 13422303  T
Q  163 atccaaatattaaattttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtg-ttttttatattattttga 261  Q
    |||||||||||||||||||       || || ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  13422304 atccaaatattaaattttattttgttaaaaaataattatccaatactttccgatacatcccgatacgcacggatacttgtgtttttttatattattttga 13422403  T
Q  262 tttctg 267  Q
    ||||||    
T  13422404 tttctg 13422409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 74 - 267
Target Start/End: Complemental strand, 12580675 - 12580471
Alignment:
Q  74 gctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgata-----------cttttcgatacgtatccggagagt 162  Q
    |||||||||||||||||||| ||||| ||||| |||||||||| ||||||||||||||| |||||           |||  |||||||||||||||||||    
T  12580675 gctgtgaagccccgatacttcaaaatagatgatgtaccgtatctcctgcgtatcctgcaccgataactgtctgatacttcccgatacgtatccggagagt 12580576  T
Q  163 atccaaatattaaattttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtgttttttatattattttgat 262  Q
    |||||||||||||||||||       || |  |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12580575 atccaaatattaaattttatttttttaaaatataattatctgatactttccgatacatcccgatacgcacggatacttgtgttttttatattattttgat 12580476  T
Q  263 ttctg 267  Q
    |||||    
T  12580475 ttctg 12580471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 75 - 267
Target Start/End: Complemental strand, 28876687 - 28876482
Alignment:
Q  75 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac-----------ttttcgatacgtatccggagagta 163  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||           || ||||||||||||| |||||||    
T  28876687 ctgtgaagccccgatacttcaaaatggatgacgtactgtatcccctgcgtatcctgcaccgatacctgcccgatacttctcgatacgtatccagagagta 28876588  T
Q  164 tccaaatattaaattttannnnnnnaagaac-taattatccgatactttccgatacatcccgatacgcacggatacttgtgtt-ttttatattattttga 261  Q
    ||||||||||||||||||       || ||  ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |    
T  28876587 tccaaatattaaattttattttttaaaaaaaataattatccgatactttccgatacatcccgatacgcacggatacttgtgtttttttatattattttta 28876488  T
Q  262 tttctg 267  Q
    ||||||    
T  28876487 tttctg 28876482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 359 - 480
Target Start/End: Original strand, 6028864 - 6028986
Alignment:
Q  359 ggatatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatgtataacactgctggtgctctttt 457  Q
    |||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  6028864 ggatatagtgcttcttttttggatcgatatagtatagcactaacaatgttccttttggatatagtatagcattgatgtataacactgctcgtgctctttt 6028963  T
Q  458 tggtatatattgcgtatgtaatt 480  Q
    | |||||| ||||||||||||||    
T  6028964 ttgtatattttgcgtatgtaatt 6028986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 359 - 480
Target Start/End: Original strand, 32877829 - 32877951
Alignment:
Q  359 ggatatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatgtataacactgctggtgctctttt 457  Q
    |||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||||| |||| |||||||||||||||| ||||||||||||    
T  32877829 ggatatagtgcttcttttttggatcgatatagtatagcactaacaatgttccttttggatatagtatagcgttgatgtataacactgatggtgctctttt 32877928  T
Q  458 tggtatatattgcgtatgtaatt 480  Q
    |||||||| ||||||||||||||    
T  32877929 tggtatattttgcgtatgtaatt 32877951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 305 - 480
Target Start/End: Original strand, 37669289 - 37669462
Alignment:
Q  305 taaacgttagttacttgttagtgttaactcttagtactgatgtgttcnnnnnnnggatatagtgattcttttttgaatcgatatagtatagcactaacaa 404  Q
    |||||||||||||||||||| | ||||||||||||| ||||||||||       |||||||||| |||||||||| ||| ||||| ||||||||||||||    
T  37669289 taaacgttagttacttgttaatattaactcttagtattgatgtgttctttttt-ggatatagtgcttcttttttggatcaatataatatagcactaacaa 37669387  T
Q  405 gttccttttggatatagtgtagcattgatgtataacactgctggtgctctttttggtatatattgcgtatgtaatt 480  Q
    ||| |||||||||||| |||||||||||||||||| |||| | ||||||||||| ||||||||| |||||||||||    
T  37669388 gtttcttttggatatactgtagcattgatgtataatactgatagtgctcttttt-gtatatatttcgtatgtaatt 37669462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 74 - 306
Target Start/End: Complemental strand, 45217342 - 45217109
Alignment:
Q  74 gctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac-----------ttttcgatacgtatccggagagt 162  Q
    ||||||||||||||||||||||||||||||||  ||  ||||||||||||||||||||| ||||||           ||| |||||||||||||||||||    
T  45217342 gctgtgaagccccgatactttaaaatggatgatatattgtatcccctgcgtatcctgcaccgatacctgtccgatattttccgatacgtatccggagagt 45217243  T
Q  163 atccaaatattaaattttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtgttttttatattattttgat 262  Q
    |||||||||||||||||||       || || ||||||||||||||          |||||||||||||||||||||||| |||||||||||||||||||    
T  45217242 atccaaatattaaattttattttttaaaaaaataattatccgatac----------atcccgatacgcacggatacttgtattttttatattattttgat 45217153  T
Q  263 ttctgnnnnnnnnnngtgtaaaaaataagaataaaaacattata 306  Q
    |||||          |||||||||||||||||||||||||||||    
T  45217152 ttctgttttttttttgtgtaaaaaataagaataaaaacattata 45217109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 75 - 267
Target Start/End: Original strand, 36483432 - 36483625
Alignment:
Q  75 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgca-----------tcgatacttttcgatacgtatccggagagta 163  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||            ||||||||| ||||||||||||| ||||||    
T  36483432 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatactttccgatacgtatccgaagagta 36483531  T
Q  164 tccaaatattaaattttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtgttttttatattattttgatt 263  Q
    ||||||||||||||||||       || || ||||||          |||||||| |||||||||||||| |||||||| ||||||||||||||||||||    
T  36483532 tccaaatattaaattttattttttaaaaaaataatta----------tccgatacgtcccgatacgcacgaatacttgtattttttatattattttgatt 36483621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 78 - 218
Target Start/End: Complemental strand, 32638974 - 32638833
Alignment:
Q  78 tgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgata-cttttcgatacgtatccggagagtatccaaatattaaa 176  Q
    |||||| | ||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||   |||||||||||||||||||||||||||||||||    
T  32638974 tgaagctctgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacgtatccggagagtatccaaatattaaa 32638875  T
Q  177 ttttannnnnnnaagaactaattatccgatactttccgatac 218  Q
    |||||       || || |||||||| |||||||||||||||    
T  32638874 ttttattttttaaaaaaataattatctgatactttccgatac 32638833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 359 - 480
Target Start/End: Original strand, 25022528 - 25022648
Alignment:
Q  359 ggatatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatgtataacactgctggtgctctttt 457  Q
    |||||||||| |||||||||| ||| ||||||||||||| || ||| |||| ||||||||||||||||||||||||  ||||||||| ||||||||||||    
T  25022528 ggatatagtgtttcttttttggatcaatatagtatagcattatcaatgttctttttggatatagtgtagcattgat--ataacactgatggtgctctttt 25022625  T
Q  458 tggtatatattgcgtatgtaatt 480  Q
    |||||||| |||| |||||||||    
T  25022626 tggtatattttgcatatgtaatt 25022648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 75 - 306
Target Start/End: Original strand, 4245937 - 4246158
Alignment:
Q  75 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac-----------ttttcgatacgtatccggagagta 163  Q
    ||||||||||||||| ||| ||||| |||||||||||||||||||||| ||||||||| ||||||           ||  ||||||||||||| ||||||    
T  4245937 ctgtgaagccccgatgcttcaaaatagatgacgtaccgtatcccctgcatatcctgcaccgatacctgcccgatacttcccgatacgtatccgaagagta 4246036  T
Q  164 tccaaatattaaattttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtgttttttatattattttgatt 263  Q
    ||||||||||||||||||       || || ||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||    
T  4246037 tccaaatattaaattttattttttaaaaaaataattatccgatac----------atcccgatacgcacggatacttgtgttttttatattattttgatt 4246126  T
Q  264 tctgnnnnnnnnnngtgtaaaaaataagaataaaaacattata 306  Q
    | ||           ||||||||||||||||||||||||||||    
T  4246127 tttg-----------tgtaaaaaataagaataaaaacattata 4246158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 360 - 480
Target Start/End: Original strand, 19436627 - 19436746
Alignment:
Q  360 gatatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatgtataacactgctggtgctcttttt 458  Q
    ||||||||| |||||||||| ||||||||||||||||| |||||| |||||||||||||||||| || ||||||  |||||| ||| |||| ||||||||    
T  19436627 gatatagtgcttcttttttggatcgatatagtatagcattaacaatgttccttttggatatagtataacattga--tataaccctgatggtactcttttt 19436724  T
Q  459 ggtatatattgcgtatgtaatt 480  Q
    ||||||| ||||||||||||||    
T  19436725 ggtatattttgcgtatgtaatt 19436746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 360 - 480
Target Start/End: Original strand, 19572776 - 19572895
Alignment:
Q  360 gatatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatgtataacactgctggtgctcttttt 458  Q
    ||||||||| |||||||||| ||||||||||||||||| |||||| |||||||||||||||||| || ||||||  |||||| ||| |||| ||||||||    
T  19572776 gatatagtgcttcttttttggatcgatatagtatagcattaacaatgttccttttggatatagtataacattga--tataaccctgatggtactcttttt 19572873  T
Q  459 ggtatatattgcgtatgtaatt 480  Q
    ||||||| ||||||||||||||    
T  19572874 ggtatattttgcgtatgtaatt 19572895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 75 - 264
Target Start/End: Original strand, 32877434 - 32877626
Alignment:
Q  75 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgca-----------tcgatacttttcgatacgtatccggagagta 163  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||            ||||||||  ||||||||||| ||||||||    
T  32877434 ctgtgaagccccgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatcgggagagta 32877533  T
Q  164 tccaaatattaaattttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtg--ttttttatattattttga 261  Q
    ||||||||||||||||||       || || ||||          |||||||||||||| ||||||||||||||||||||  ||||||||||||||||||    
T  32877534 tccaaatattaaattttattttttaaaaaaataat----------tttccgatacatcctgatacgcacggatacttgtgttttttttatattattttga 32877623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 75 - 181
Target Start/End: Original strand, 6028484 - 6028601
Alignment:
Q  75 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgca-----------tcgatacttttcgatacgtatccggagagta 163  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||            ||||||||| |||||| |||| ||||||||    
T  6028484 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatatctgcccgatactttccgatacatatcgggagagta 6028583  T
Q  164 tccaaatattaaatttta 181  Q
    ||||||||||||||||||    
T  6028584 tccaaatattaaatttta 6028601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 359 - 480
Target Start/End: Complemental strand, 19947719 - 19947599
Alignment:
Q  359 ggatatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatgtataacactgctggtgctctttt 457  Q
    |||||||||| |||||||||| |||||||||||||| || |||||| ||| ||||||| |||||| || |||||||  ||||||||| ||||||||||||    
T  19947719 ggatatagtgcttcttttttggatcgatatagtataacattaacaatgtttcttttgggtatagtataacattgat--ataacactggtggtgctctttt 19947622  T
Q  458 tggtatatattgcgtatgtaatt 480  Q
    |||||| | ||||||||||||||    
T  19947621 tggtatgttttgcgtatgtaatt 19947599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 76 - 181
Target Start/End: Complemental strand, 2873030 - 2872914
Alignment:
Q  76 tgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgca-----------tcgatacttttcgatacgtatccggagagtat 164  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||            ||||||||  |||||||||||||||||||||    
T  2873030 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagtat 2872931  T
Q  165 ccaaatattaaatttta 181  Q
    |||||||| ||||||||    
T  2872930 ccaaatatgaaatttta 2872914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 75 - 181
Target Start/End: Original strand, 5539433 - 5539538
Alignment:
Q  75 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatacttttc-gatacgtatccggagagtatccaaatatt 173  Q
    ||||||||||| ||||||| ||||||||||| |||| ||||||| ||||||||||||| |||||| |  | |||| ||||||||||||||||||||||||    
T  5539433 ctgtgaagccc-gatacttcaaaatggatgatgtactgtatccc-tgcgtatcctgcaccgatacctgcccgatatgtatccggagagtatccaaatatt 5539530  T
Q  174 aaatttta 181  Q
    ||||||||    
T  5539531 aaatttta 5539538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 359 - 480
Target Start/End: Original strand, 42949443 - 42949563
Alignment:
Q  359 ggatatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatgtataacactgctggtgctctttt 457  Q
    |||||||||| |||||||||| ||||||||||||| |||||||||| |||  |||| ||||||   |||||||||  |||||||| | || |||||||||    
T  42949443 ggatatagtgcttcttttttggatcgatatagtatcgcactaacaatgtttatttttgatataaaatagcattga--tataacaccgatgatgctctttt 42949540  T
Q  458 tggtatatattgcgtatgtaatt 480  Q
    |||||||| ||||||||||||||    
T  42949541 tggtatattttgcgtatgtaatt 42949563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 78 - 181
Target Start/End: Original strand, 12357889 - 12357992
Alignment:
Q  78 tgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgata-cttttcgatacgtatccggagagtatccaaatattaaa 176  Q
    |||||||| ||||||| |||||||||||||||| |||||| ||| |||||||||| ||||| |||  ||||||||||| | | |||||||||||||||||    
T  12357889 tgaagcccggatacttcaaaatggatgacgtac-gtatcctctgtgtatcctgcaccgatatcttcccgatacgtatcagcatagtatccaaatattaaa 12357987  T
Q  177 tttta 181  Q
    |||||    
T  12357988 tttta 12357992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 78 - 181
Target Start/End: Original strand, 12359017 - 12359120
Alignment:
Q  78 tgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgata-cttttcgatacgtatccggagagtatccaaatattaaa 176  Q
    |||||||| ||||||| |||||||||||||||| |||||| ||| |||||||||| ||||| |||  ||||||||||| | | |||||||||||||||||    
T  12359017 tgaagcccggatacttcaaaatggatgacgtac-gtatcctctgtgtatcctgcaccgatatcttcccgatacgtatcagcatagtatccaaatattaaa 12359115  T
Q  177 tttta 181  Q
    |||||    
T  12359116 tttta 12359120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 76 - 139
Target Start/End: Original strand, 19436272 - 19436335
Alignment:
Q  76 tgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac 139  Q
    |||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||| ||||||    
T  19436272 tgtgaagctccgatacttcaaaatggatgacgtaccgtatcccttgcgtatcctgcaccgatac 19436335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 76 - 139
Target Start/End: Original strand, 19572421 - 19572484
Alignment:
Q  76 tgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac 139  Q
    |||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||| ||||||    
T  19572421 tgtgaagctccgatacttcaaaatggatgacgtaccgtatcccttgcgtatcctgcaccgatac 19572484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 76 - 181
Target Start/End: Original strand, 25022123 - 25022239
Alignment:
Q  76 tgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatactt---------ttc--gatacgtatccggagagtat 164  Q
    ||||||||||| |||||| |||||||||||| ||||||||| ||||||||||||||| |||||| |         |||  |||||||||| |||||||||    
T  25022123 tgtgaagccccaatacttcaaaatggatgacataccgtatctcctgcgtatcctgcaccgatacctgcccgatacttcctgatacgtatcgggagagtat 25022222  T
Q  165 ccaaatattaaatttta 181  Q
    |||||||||||||||||    
T  25022223 ccaaatattaaatttta 25022239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 359 - 428
Target Start/End: Complemental strand, 27109052 - 27108982
Alignment:
Q  359 ggatatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagtgtagca 428  Q
    |||||||||| |||||||||| |||||||||||||| |||||||||  ||||||||||||||||| |||||    
T  27109052 ggatatagtgcttcttttttggatcgatatagtataacactaacaattttccttttggatatagtatagca 27108982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 85 - 139
Target Start/End: Original strand, 32424928 - 32424982
Alignment:
Q  85 ccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac 139  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||||| ||||||    
T  32424928 ccgatacttcaaaatggatgacgtaccgtatcccttgcgtatcctgcaccgatac 32424982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 74 - 132
Target Start/End: Original strand, 37372255 - 37372313
Alignment:
Q  74 gctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgca 132  Q
    |||||||||| ||||||||| ||||||||||||||| |||||| |||||||||||||||    
T  37372255 gctgtgaagctccgatacttcaaaatggatgacgtatcgtatctcctgcgtatcctgca 37372313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 74 - 132
Target Start/End: Original strand, 37668578 - 37668636
Alignment:
Q  74 gctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgca 132  Q
    |||||||| ||||||||||| ||||||||||||||||||||| ||||||||||| ||||    
T  37668578 gctgtgaaaccccgatacttcaaaatggatgacgtaccgtattccctgcgtatcttgca 37668636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 135 - 181
Target Start/End: Original strand, 42949198 - 42949244
Alignment:
Q  135 gatacttttcgatacgtatccggagagtatccaaatattaaatttta 181  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||    
T  42949198 gatacttttcgatacgtatcgggagagtatccaaatattaaatttta 42949244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 222 - 267
Target Start/End: Original strand, 6028622 - 6028667
Alignment:
Q  222 ccgatacgcacggatacttgtgttttttatattattttgatttctg 267  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||    
T  6028622 ccgatacgcacagatacttgtgttttttatattattttgatttctg 6028667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 211 - 267
Target Start/End: Original strand, 5539561 - 5539617
Alignment:
Q  211 tccgatacatcccgatacgcacggatacttgtgttttttatattattttgatttctg 267  Q
    |||||||| |  |||||||||| ||||||||||||||||||||||||||||||||||    
T  5539561 tccgatacttttcgatacgcacagatacttgtgttttttatattattttgatttctg 5539617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 80 - 248
Target Start/End: Complemental strand, 19948112 - 19947934
Alignment:
Q  80 aagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgca-----------tcgatacttttcgatacgtatccggagagtatccaa 168  Q
    |||||| ||||||| ||||||||||||||| | ||||||||||||||||||||           |||||||||  ||||||||| | |||||||||||||    
T  19948112 aagccctgatacttcaaaatggatgacgtatcatatcccctgcgtatcctgcaccgatacctgctcgatacttcccgatacgtaccgggagagtatccaa 19948013  T
Q  169 atattaaattttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtgttttt 248  Q
    ||||| || ||||       |  || ||||| ||||||  |||||||||| | ||||||||||| |||||||||||||||    
T  19948012 atatt-aactttattttttaagaaaataattttccgattatttccgatacgttccgatacgcacagatacttgtgttttt 19947934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 76 - 132
Target Start/End: Original strand, 40412433 - 40412489
Alignment:
Q  76 tgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgca 132  Q
    ||||||||||| |||||| ||||||||||| ||| ||||||||||||||||||||||    
T  40412433 tgtgaagccccaatacttcaaaatggatgatgtatcgtatcccctgcgtatcctgca 40412489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 75 - 138
Target Start/End: Original strand, 32678 - 32741
Alignment:
Q  75 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgata 138  Q
    |||| |||||||||||||||||||||| ||||||| | ||||| ||| ||||||||||||||||    
T  32678 ctgtaaagccccgatactttaaaatggttgacgtatcatatcctctgtgtatcctgcatcgata 32741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 75 - 138
Target Start/End: Original strand, 29355620 - 29355683
Alignment:
Q  75 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgata 138  Q
    ||||||||||| ||||||| |||||||||||| || | ||||||||| ||||||||||||||||    
T  29355620 ctgtgaagccctgatacttcaaaatggatgacatatcatatcccctgggtatcctgcatcgata 29355683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 222 - 267
Target Start/End: Original strand, 25022260 - 25022306
Alignment:
Q  222 ccgatacgcacggatacttgtg-ttttttatattattttgatttctg 267  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||    
T  25022260 ccgatacgcacggatacttgtgtttttttatattattttgatttctg 25022306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 223 - 264
Target Start/End: Complemental strand, 2872883 - 2872842
Alignment:
Q  223 cgatacgcacggatacttgtgttttttatattattttgattt 264  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  2872883 cgatacgcacggatacttgtgttctttatattattttgattt 2872842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 362 - 422
Target Start/End: Original strand, 3892206 - 3892267
Alignment:
Q  362 tatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagt 422  Q
    ||||||| |||||||||| || ||||||||||||||||||||| ||| ||||||||||||||    
T  3892206 tatagtgcttcttttttggattgatatagtatagcactaacaatgtttcttttggatatagt 3892267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 78 - 139
Target Start/End: Original strand, 7411636 - 7411697
Alignment:
Q  78 tgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac 139  Q
    |||||| ||||||||| |||||||||| |||| ||||||| ||| |||||||||||||||||    
T  7411636 tgaagctccgatacttcaaaatggatggcgtatcgtatccactgtgtatcctgcatcgatac 7411697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 360 - 480
Target Start/End: Complemental strand, 8170962 - 8170854
Alignment:
Q  360 gatatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatgtataacactgctggtgctcttttt 458  Q
    ||||||||| |||||||||  |||||||||||||||||||| ||| |||| ||||||||||             |||||| ||||| |||||||||||||    
T  8170962 gatatagtgcttcttttttagatcgatatagtatagcactaccaatgttctttttggatat-------------tgtatagcactgatggtgctcttttt 8170876  T
Q  459 ggtatatattgcgtatgtaatt 480  Q
    ||||||||||| ||||||||||    
T  8170875 ggtatatattgtgtatgtaatt 8170854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 83 - 139
Target Start/End: Complemental strand, 5818424 - 5818368
Alignment:
Q  83 ccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac 139  Q
    ||||||||||| ||||||||||||||| |||||| | ||||||||||||| ||||||    
T  5818424 ccccgatacttcaaaatggatgacgtatcgtatcacttgcgtatcctgcaccgatac 5818368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 360 - 422
Target Start/End: Original strand, 20182629 - 20182692
Alignment:
Q  360 gatatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagt 422  Q
    ||||| ||| |||||||||  |||||||||||||| ||||||||| ||||||||||||||||||    
T  20182629 gatatggtgcttcttttttttatcgatatagtataacactaacaatgttccttttggatatagt 20182692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 76 - 139
Target Start/End: Original strand, 27886188 - 27886251
Alignment:
Q  76 tgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac 139  Q
    ||||||| |||||||||| |||||||||||||||  |||| |||||| ||||||||| ||||||    
T  27886188 tgtgaagtcccgatacttcaaaatggatgacgtattgtattccctgcatatcctgcaccgatac 27886251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 76 - 139
Target Start/End: Original strand, 27944846 - 27944909
Alignment:
Q  76 tgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac 139  Q
    ||||||| |||||||||| |||||||||||||||  |||| |||||| ||||||||| ||||||    
T  27944846 tgtgaagtcccgatacttcaaaatggatgacgtattgtattccctgcatatcctgcaccgatac 27944909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 222 - 267
Target Start/End: Original strand, 40412599 - 40412645
Alignment:
Q  222 ccgatacgcacggatacttgtg-ttttttatattattttgatttctg 267  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||    
T  40412599 ccgatacgcacggatacgtgtgtttttttatattattttgatttctg 40412645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 370 - 418
Target Start/End: Original strand, 38388939 - 38388988
Alignment:
Q  370 ttcttttttgaatcgatatagtatagcactaacaa-gttccttttggata 418  Q
    ||||||||||||||||||||||||| ||||||||| |||| |||||||||    
T  38388939 ttcttttttgaatcgatatagtataacactaacaatgttcattttggata 38388988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 360 - 428
Target Start/End: Original strand, 40412805 - 40412874
Alignment:
Q  360 gatatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagtgtagca 428  Q
    ||||||||| || ||||||  |||||||||||||||||||||||| ||||  |||||||||||| |||||    
T  40412805 gatatagtgctttttttttagatcgatatagtatagcactaacaatgttctctttggatatagtatagca 40412874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 220 - 267
Target Start/End: Original strand, 19436393 - 19436441
Alignment:
Q  220 tcccgatacgcacggatacttgtgtttt-ttatattattttgatttctg 267  Q
    |||||||||||| |||||||||| |||| ||||||||||||||||||||    
T  19436393 tcccgatacgcatggatacttgtatttttttatattattttgatttctg 19436441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 220 - 267
Target Start/End: Original strand, 19572542 - 19572590
Alignment:
Q  220 tcccgatacgcacggatacttgtgtttt-ttatattattttgatttctg 267  Q
    |||||||||||| |||||||||| |||| ||||||||||||||||||||    
T  19572542 tcccgatacgcatggatacttgtatttttttatattattttgatttctg 19572590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 75 - 139
Target Start/End: Original strand, 38388664 - 38388728
Alignment:
Q  75 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac 139  Q
    ||||||| ||||||||||| ||||||||||  |||  |||||| |||||||||||||| ||||||    
T  38388664 ctgtgaaaccccgatacttcaaaatggatgctgtattgtatcctctgcgtatcctgcaccgatac 38388728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 78 - 137
Target Start/End: Complemental strand, 27109282 - 27109223
Alignment:
Q  78 tgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgat 137  Q
    |||||||| |||| |||||||||||||| ||| |||||| ||| |||||| |||||||||    
T  27109282 tgaagccctgatattttaaaatggatgatgtatcgtatctcctacgtatcatgcatcgat 27109223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 30804797 - 30804750
Alignment:
Q  133 tcgatacttttcgatacgtatccggagagtatccaaatattaaatttt 180  Q
    |||||||||| ||||||||||| ||||||||||| |||||||| ||||    
T  30804797 tcgatactttccgatacgtatcaggagagtatccgaatattaattttt 30804750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 222 - 267
Target Start/End: Complemental strand, 8171172 - 8171126
Alignment:
Q  222 ccgatacgcacggatacttgtgtttttt-atattattttgatttctg 267  Q
    |||||||||||| |||| |||||||||| ||||||||||||||||||    
T  8171172 ccgatacgcacgaatacgtgtgtttttttatattattttgatttctg 8171126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 381 - 422
Target Start/End: Original strand, 27968375 - 27968417
Alignment:
Q  381 atcgatatagtatagcactaacaa-gttccttttggatatagt 422  Q
    |||||||||||||| ||||||||| ||||||||||||||||||    
T  27968375 atcgatatagtataacactaacaatgttccttttggatatagt 27968417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 434 - 480
Target Start/End: Original strand, 27968416 - 27968462
Alignment:
Q  434 gtataacactgctggtgctctttttggtatatattgcgtatgtaatt 480  Q
    ||||||||||| ||||||||||||||  |||||||| ||||||||||    
T  27968416 gtataacactgatggtgctctttttgtgatatattgtgtatgtaatt 27968462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 446 - 480
Target Start/End: Original strand, 40412879 - 40412913
Alignment:
Q  446 tggtgctctttttggtatatattgcgtatgtaatt 480  Q
    |||||||||||||||||||||||| ||||||||||    
T  40412879 tggtgctctttttggtatatattgtgtatgtaatt 40412913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 430
Target Start/End: Complemental strand, 5818199 - 5818138
Alignment:
Q  370 ttcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcatt 430  Q
    |||| ||||| || ||| ||||||||||||||||| |||||||||| ||||||| |||||||    
T  5818199 ttctgttttggattgatgtagtatagcactaacaatgttccttttgaatatagtatagcatt 5818138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 84 - 132
Target Start/End: Original strand, 20182380 - 20182428
Alignment:
Q  84 cccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgca 132  Q
    |||||||||| || ||||||||||||| ||||||| ||| |||||||||    
T  20182380 cccgatacttcaagatggatgacgtacggtatcccgtgcatatcctgca 20182428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 78 - 122
Target Start/End: Original strand, 28737255 - 28737299
Alignment:
Q  78 tgaagccccgatactttaaaatggatgacgtaccgtatcccctgc 122  Q
    ||||||||||||| || |||||||||||||||  |||||||||||    
T  28737255 tgaagccccgatatttcaaaatggatgacgtattgtatcccctgc 28737299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 278 - 306
Target Start/End: Complemental strand, 34901286 - 34901258
Alignment:
Q  278 gtgtaaaaaataagaataaaaacattata 306  Q
    |||||||||||||||||||||||||||||    
T  34901286 gtgtaaaaaataagaataaaaacattata 34901258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 247; Significance: 1e-137; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 88 - 484
Target Start/End: Complemental strand, 31195977 - 31195569
Alignment:
Q  88 atactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac-----------ttttcgatacgtatccggagagtatccaaatattaaa 176  Q
    |||||| ||||||||||||||| |||||||||||||||||||||| ||||||           ||  ||||||||||| |||||||||||||||||||||    
T  31195977 atacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatctggagagtatccaaatattaaa 31195878  T
Q  177 ttttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtgtttttt-atattattttgatttctgnnnnnnnn 275  Q
    |||||       || || |||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||            
T  31195877 ttttattttttaaaaaaataattatccgatactttccgatacatcccgatacgcacagatacttgtgtttttttatattattttgatttctgtttttttt 31195778  T
Q  276 nngtgtaaaaaataagaataaaaacattataaacgttagttacttgttagtgttaactcttagtactgatgtgttcnnnnnnnggatatagtgattcttt 375  Q
      |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||       |||||||||||||||||    
T  31195777 ttgtgtaaaaaataagaataaaaacattataaacgttagttacttgttagtgttaactcttagtactgttgtgttctttttttggatatagtgattcttt 31195678  T
Q  376 tttgaatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatgtataacactgctggtgctctttttggtatatattgcgtatg 475  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31195677 tttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatgtataacactgctggtgctctttttggtatatattgcgtatg 31195578  T
Q  476 taattacct 484  Q
    |||||||||    
T  31195577 taattacct 31195569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 305 - 481
Target Start/End: Complemental strand, 7188177 - 7188000
Alignment:
Q  305 taaacgttagttacttgttagtgttaactcttagtactgatgtgttcnnnnnnn-ggatatagtgattcttttttgaatcgatatagtatagcactaaca 403  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||| |||||||||||||||||||||||    
T  7188177 taaatgttagttacttgttagtgttaactcttagtactgatgtgttcttttttttggatatagtgattcttttttggatcgatatagtatagcactaaca 7188078  T
Q  404 agttccttttggatatagtgtagcattgatgtataacactgctggtgctctttttggtatatattgcgtatgtaatta 481  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| |||||||||||    
T  7188077 agttccttttggatatagtgtagcattgatgtatagcactgatggtgctctttttggtatatattgtgtatgtaatta 7188000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 305 - 480
Target Start/End: Complemental strand, 1036213 - 1036035
Alignment:
Q  305 taaacgttagttacttgttagtgttaactcttagtactgatgtgttcnnnnnnnggatatagtgattcttttttgaatcgatatagtatagcactaacaa 404  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||| |||||||||||||| |||||||||    
T  1036213 taaacgtcagttacttgttagtgttaactcttagtactgatgtgttctttttttggatatagtgattcttttttggatcgatatagtatatcactaacaa 1036114  T
Q  405 gttccttttggatatagtgtagcattgatgtataacactgctggtgctct---ttttggtatatattgcgtatgtaatt 480  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||   ||||||||||||||||||||||||||    
T  1036113 gttcattttggatatagtgtagcattgatgtataacactgatggtgctcttaattttggtatatattgcgtatgtaatt 1036035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 75 - 306
Target Start/End: Complemental strand, 1036947 - 1036703
Alignment:
Q  75 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac-----------ttttcgatacgtatccggagagta 163  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||           ||| ||||||||||||||||||||    
T  1036947 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatactttccgatacgtatccggagagta 1036848  T
Q  164 tccaaatattaaattttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtgtt-ttttatattattttgat 262  Q
    || |||||||||||||||       || || ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  1036847 tctaaatattaaattttatttttttaaaaaataattatccgatactttccgatacatcccgatacgcacggatacttgtgtttttttatattattttgat 1036748  T
Q  263 ttctg-nnnnnnnnnngtgtaaaaaataagaataaaaacattata 306  Q
    |||||           |||||||||||||||||||||||||||||    
T  1036747 ttctgtttttttttttgtgtaaaaaataagaataaaaacattata 1036703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 305 - 480
Target Start/End: Original strand, 8357601 - 8357775
Alignment:
Q  305 taaacgttagttacttgttagtgttaactcttagtactgatgtgttcnnnnnnnggatatagtgattcttttttgaatcgatatagtatagcactaacaa 404  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||       |||||||||| |||||||||| ||| ||||| ||||| ||||||||    
T  8357601 taaatgttagttacttgttagtgttaactcttagtactgatgtgttctttttt-ggatatagtgcttcttttttggatcaatataatatagtactaacaa 8357699  T
Q  405 gttccttttgga-tatagtgtagcattgatgtataacactgctggtgctctttttggtatatattgcgtatgtaatt 480  Q
    |||||||||||| ||||||| | ||||||||||||  |||| ||||||||||||| |||||||||||||||||||||    
T  8357700 gttccttttggattatagtgcaacattgatgtatagtactgatggtgctcttttt-gtatatattgcgtatgtaatt 8357775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 78 - 267
Target Start/End: Original strand, 8356958 - 8357158
Alignment:
Q  78 tgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatacttttc-----------gatacgtatccggagagtatcc 166  Q
    ||||| || ||||||| |||||||||||||||||||||||||||||||||||||| |||||| | ||           |||||||||||| |||||||||    
T  8356958 tgaagtcctgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgtccgatacttcccgatacgtatccgaagagtatcc 8357057  T
Q  167 aaatattaaattttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtgttttttatattattttgatttct 266  Q
    |||||||||||||||       || || |||||||||||||||||||||||| || ||||||||||| ||||||||||| ||||||||||||||||||||    
T  8357058 aaatattaaattttattttttaaaaaaataattatccgatactttccgatacgtctcgatacgcacgaatacttgtgttctttatattattttgatttct 8357157  T
Q  267 g 267  Q
    |    
T  8357158 g 8357158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 359 - 475
Target Start/End: Complemental strand, 31740559 - 31740442
Alignment:
Q  359 ggatatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatgtataacactgctggtgctctttt 457  Q
    |||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||| | || |||||||||||||||||| | ||||| ||||    
T  31740559 ggatatagtgcttcttttttggatcgatatagtatagcactaacaatgttccttttggatataatataacattgatgtataacactgattgtgctatttt 31740460  T
Q  458 tggtatatattgcgtatg 475  Q
    |||||||| |||||||||    
T  31740459 tggtatattttgcgtatg 31740442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 78 - 306
Target Start/End: Complemental strand, 7188894 - 7188667
Alignment:
Q  78 tgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatactt---------ttc--gatacgtatccggagagtatcc 166  Q
    |||||||||||||||| ||||||||||   ||||||||||||||||||||||||| |||||| |         |||  ||||||||||||||||||||||    
T  7188894 tgaagccccgatacttcaaaatggatg---taccgtatcccctgcgtatcctgcaccgatacctgcctgatacttcctgatacgtatccggagagtatcc 7188798  T
Q  167 aaatattaaattttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtgttttttatattattttgatttct 266  Q
    |||||||||||||||       || || ||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||||||    
T  7188797 aaatattaaattttatttttaaaaaaaataattatccgatac----------atcccgatacgcacggatacttgtgttttttatattattttgatttct 7188708  T
Q  267 g-nnnnnnnnnngtgtaaaaaataagaataaaaacattata 306  Q
    |           |||||||||||||||||||||||||||||    
T  7188707 gttttttttttggtgtaaaaaataagaataaaaacattata 7188667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 359 - 480
Target Start/End: Complemental strand, 32130402 - 32130282
Alignment:
Q  359 ggatatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatgtataacactgctggtgctctttt 457  Q
    |||||||||| |||||||||| ||| ||||||||||||| |||||| |||||||||||||| ||| || |||| ||  ||||||||| ||||||||||||    
T  32130402 ggatatagtgcttcttttttggatcaatatagtatagcattaacaatgttccttttggataaagtataacatttat--ataacactgatggtgctctttt 32130305  T
Q  458 tggtatatattgcgtatgtaatt 480  Q
    |||||||| ||||||||||||||    
T  32130304 tggtatattttgcgtatgtaatt 32130282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 78 - 181
Target Start/End: Original strand, 31079612 - 31079715
Alignment:
Q  78 tgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatacttttcgatacgtatccggagagtatccaaatattaaat 177  Q
    |||||| |||||||||||||||||||||||||  ||||||||||||||||||||| |||||||| |||||| ||||| ||| ||||||  || |||||||    
T  31079612 tgaagctccgatactttaaaatggatgacgtattgtatcccctgcgtatcctgcaccgatacttctcgataagtatcaggatagtatcttaagattaaat 31079711  T
Q  178 ttta 181  Q
    ||||    
T  31079712 ttta 31079715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 76 - 181
Target Start/End: Complemental strand, 32130779 - 32130663
Alignment:
Q  76 tgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgca-----------tcgatacttttcgatacgtatccggagagtat 164  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||           |||||| ||  ||||||||||| |||||||||    
T  32130779 tgtgaagccccgatactttaaaatgaatgacgtaccgtatcccctgcgtatcctgcactgatacctgttcgatatttcccgatacgtatcaggagagtat 32130680  T
Q  165 ccaaatattaaatttta 181  Q
    |||||||||||||||||    
T  32130679 ccaaatattaaatttta 32130663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 74 - 181
Target Start/End: Complemental strand, 10894694 - 10894587
Alignment:
Q  74 gctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatacttttc-gatacgtatccggagagtatccaaatat 172  Q
    |||||||||||| ||||||| ||||||||||||||||||||||||| ||||||| |||| |||||| |  | |||||||||| |||||||||||||| ||    
T  10894694 gctgtgaagccctgatacttcaaaatggatgacgtaccgtatcccc-gcgtatcatgcaccgatacctgcctgatacgtatcaggagagtatccaaagat 10894596  T
Q  173 taaatttta 181  Q
    |||||||||    
T  10894595 taaatttta 10894587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 359 - 434
Target Start/End: Complemental strand, 10894376 - 10894300
Alignment:
Q  359 ggatatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatg 434  Q
    |||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||| |||||    
T  10894376 ggatatagtgcttcttttttggatcgatatagtatagcactaacaatgttccttttggatatagtatagcactgatg 10894300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 75 - 139
Target Start/End: Original strand, 27083982 - 27084046
Alignment:
Q  75 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac 139  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| ||||||    
T  27083982 ctgtgaagccccgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcaccgatac 27084046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 73 - 181
Target Start/End: Original strand, 3212472 - 3212591
Alignment:
Q  73 ggctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgca-----------tcgatacttttcgatacgtatccggagag 161  Q
    ||||||||||||||||||||| ||||||||||||||| ||||| || || ||||||||||            ||||||||  ||||||||||||||||||    
T  3212472 ggctgtgaagccccgatacttcaaaatggatgacgtatcgtattccttgtgtatcctgcaccgatatctgcccgatacttcccgatacgtatccggagag 3212571  T
Q  162 tatccaaatattaaatttta 181  Q
    ||||||||||||||||||||    
T  3212572 tatccaaatattaaatttta 3212591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 78 - 138
Target Start/End: Original strand, 29892966 - 29893026
Alignment:
Q  78 tgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgata 138  Q
    |||||||| ||||||||||||||||||| |||| |||||||||||||||||||||||||||    
T  29892966 tgaagcccagatactttaaaatggatgatgtactgtatcccctgcgtatcctgcatcgata 29893026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 75 - 139
Target Start/End: Original strand, 26327152 - 26327216
Alignment:
Q  75 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac 139  Q
    ||||||||||||||||||| ||||||||||||||| |||||| |||| |||||||||| ||||||    
T  26327152 ctgtgaagccccgatacttcaaaatggatgacgtatcgtatctcctgtgtatcctgcaccgatac 26327216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 78 - 139
Target Start/End: Original strand, 234306 - 234367
Alignment:
Q  78 tgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac 139  Q
    |||||||||||||||| ||||||| ||||||| |||||| ||||||||||||||| ||||||    
T  234306 tgaagccccgatacttcaaaatggttgacgtatcgtatctcctgcgtatcctgcaccgatac 234367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 78 - 139
Target Start/End: Original strand, 11105286 - 11105347
Alignment:
Q  78 tgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac 139  Q
    |||||| | ||||||||||||||||||||||||||||| |  ||||||||||||||||||||    
T  11105286 tgaagctctgatactttaaaatggatgacgtaccgtattctttgcgtatcctgcatcgatac 11105347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 362 - 422
Target Start/End: Original strand, 19128395 - 19128456
Alignment:
Q  362 tatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagt 422  Q
    ||||||| |||||||||| |||||||||||||||||||||||| ||| ||||||||||||||    
T  19128395 tatagtgcttcttttttggatcgatatagtatagcactaacaatgtttcttttggatatagt 19128456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 362 - 422
Target Start/End: Original strand, 27084216 - 27084277
Alignment:
Q  362 tatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagt 422  Q
    ||||||| |||||||||||||||||||||||||| |||||||| |||||||| |||||||||    
T  27084216 tatagtgcttcttttttgaatcgatatagtatagaactaacaatgttcctttcggatatagt 27084277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 360 - 433
Target Start/End: Original strand, 7255183 - 7255258
Alignment:
Q  360 gatatagtgattcttttttgaatcgatatagtatagcactaacaa--gttccttttggatatagtgtagcattgat 433  Q
    ||||||||| |||||||||| |||||||||||||| || ||||||  |||||||||||||||||| ||||| ||||    
T  7255183 gatatagtgcttcttttttggatcgatatagtataacattaacaaatgttccttttggatatagtatagcactgat 7255258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 76 - 139
Target Start/End: Complemental strand, 6708161 - 6708098
Alignment:
Q  76 tgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac 139  Q
    ||||||||||||||||||||||||||||||| ||  |||||||||| ||||| |||| ||||||    
T  6708161 tgtgaagccccgatactttaaaatggatgacatattgtatcccctgtgtatcatgcaccgatac 6708098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 87 - 138
Target Start/End: Original strand, 32017986 - 32018037
Alignment:
Q  87 gatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgata 138  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||| |||||    
T  32017986 gatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcaccgata 32018037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 209 - 267
Target Start/End: Complemental strand, 32130645 - 32130582
Alignment:
Q  209 tttccgatacatcccgatacgcacggatacttgtgtt-----ttttatattattttgatttctg 267  Q
    |||||||||| ||||||||||||||||||||||||||     ||||||||||||||||||||||    
T  32130645 tttccgatacgtcccgatacgcacggatacttgtgtttttttttttatattattttgatttctg 32130582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 76 - 181
Target Start/End: Complemental strand, 25834616 - 25834500
Alignment:
Q  76 tgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac-----------ttttcgatacgtatccggagagtat 164  Q
    |||||| ||||||||||| ||| ||||||||||| |||||||| |||||||||||||  |||||           || |||||||||||| ||| |||||    
T  25834616 tgtgaaaccccgatacttcaaattggatgacgtatcgtatcccgtgcgtatcctgcactgatacatgcctgatatttctcgatacgtatcaggacagtat 25834517  T
Q  165 ccaaatattaaatttta 181  Q
    |||||||||||||||||    
T  25834516 ccaaatattaaatttta 25834500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 209 - 267
Target Start/End: Complemental strand, 31741154 - 31741096
Alignment:
Q  209 tttccgatacatcccgatacgcacggatacttgtgttttttatattattttgatttctg 267  Q
    |||||||||| | |||||||||||| ||||| ||||||||||||||| |||||||||||    
T  31741154 tttccgatactttccgatacgcacgaatactcgtgttttttatattaatttgatttctg 31741096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 362 - 422
Target Start/End: Original strand, 234551 - 234612
Alignment:
Q  362 tatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagt 422  Q
    ||||||| |||||||||| ||||||||||||||||||| |||| ||| ||||||||||||||    
T  234551 tatagtgcttcttttttggatcgatatagtatagcactgacaatgtttcttttggatatagt 234612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 370 - 418
Target Start/End: Complemental strand, 22988972 - 22988923
Alignment:
Q  370 ttcttttttgaatcgatatagtatagcactaacaa-gttccttttggata 418  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  22988972 ttcttttttggatcgatatagtatagcactaacaatgttccttttggata 22988923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 370 - 418
Target Start/End: Original strand, 23799424 - 23799473
Alignment:
Q  370 ttcttttttgaatcgatatagtatagcactaacaa-gttccttttggata 418  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  23799424 ttcttttttggatcgatatagtatagcactaacaatgttccttttggata 23799473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 76 - 139
Target Start/End: Original strand, 3299139 - 3299202
Alignment:
Q  76 tgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac 139  Q
    |||||||||| ||||||| ||||| ||||| ||||||||||| |||| ||||||||| ||||||    
T  3299139 tgtgaagccctgatacttcaaaatagatgatgtaccgtatcctctgcatatcctgcaccgatac 3299202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 373 - 434
Target Start/End: Complemental strand, 6707883 - 6707821
Alignment:
Q  373 ttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatg 434  Q
    ||||||| ||| |||||||||| ||||||||| |||| ||||||||||||| |||||||||||    
T  6707883 ttttttggatcaatatagtataacactaacaatgttcattttggatatagtatagcattgatg 6707821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 76 - 181
Target Start/End: Original strand, 7254928 - 7255034
Alignment:
Q  76 tgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac-ttttcgatacgtatccggagagtatccaaatatta 174  Q
    ||||||||  |||||||| |||||||| || ||| ||||||||||| ||||| |||| |||||| |   ||||||||||| | ||||||||| || ||||    
T  7254928 tgtgaagcttcgatacttcaaaatggacgatgtatcgtatcccctgtgtatcatgcaccgatacatgcccgatacgtatcagaagagtatccgaagatta 7255027  T
Q  175 aatttta 181  Q
    |||||||    
T  7255028 aatttta 7255034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 84 - 138
Target Start/End: Complemental strand, 13061417 - 13061363
Alignment:
Q  84 cccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgata 138  Q
    |||||||||| |||||| |||||||||| ||| | ||||||||||||||||||||    
T  13061417 cccgatacttcaaaatgaatgacgtaccatattctctgcgtatcctgcatcgata 13061363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 78 - 132
Target Start/End: Original strand, 19128153 - 19128207
Alignment:
Q  78 tgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgca 132  Q
    |||||| || |||||||||||||| ||||||| ||||||||||| ||||||||||    
T  19128153 tgaagctccaatactttaaaatggttgacgtatcgtatcccctgtgtatcctgca 19128207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 85 - 139
Target Start/End: Complemental strand, 31741267 - 31741213
Alignment:
Q  85 ccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac 139  Q
    ||||||||| ||||||||||||||| |||||||||| || ||| |||||||||||    
T  31741267 ccgatacttcaaaatggatgacgtatcgtatcccctacgcatcatgcatcgatac 31741213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 360 - 428
Target Start/End: Original strand, 32018358 - 32018427
Alignment:
Q  360 gatatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagtgtagca 428  Q
    ||||||||| |||||||||  || ||||||||||| ||||||||| |||| ||||||||||||| |||||    
T  32018358 gatatagtgtttcttttttagattgatatagtataacactaacaatgttctttttggatatagtatagca 32018427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 434 - 480
Target Start/End: Original strand, 3212893 - 3212939
Alignment:
Q  434 gtataacactgctggtgctctttttggtatatattgcgtatgtaatt 480  Q
    ||||| ||||| || ||||||||||||||||||||| ||||||||||    
T  3212893 gtatatcactgatgatgctctttttggtatatattgtgtatgtaatt 3212939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 359 - 401
Target Start/End: Complemental strand, 13061231 - 13061189
Alignment:
Q  359 ggatatagtgattcttttttgaatcgatatagtatagcactaa 401  Q
    |||||||| | |||||||||| |||||||||||||||||||||    
T  13061231 ggatatagcgcttcttttttggatcgatatagtatagcactaa 13061189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 78 - 132
Target Start/End: Complemental strand, 13607903 - 13607849
Alignment:
Q  78 tgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgca 132  Q
    |||| ||| ||||||| ||||||||||||||| ||||||| |||| |||||||||    
T  13607903 tgaatccctgatacttcaaaatggatgacgtatcgtatcctctgcatatcctgca 13607849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 446 - 480
Target Start/End: Original strand, 32018432 - 32018466
Alignment:
Q  446 tggtgctctttttggtatatattgcgtatgtaatt 480  Q
    |||||||||||||||||||||||| ||||||||||    
T  32018432 tggtgctctttttggtatatattgtgtatgtaatt 32018466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 435 - 480
Target Start/End: Original strand, 3299362 - 3299407
Alignment:
Q  435 tataacactgctggtgctctttttggtatatattgcgtatgtaatt 480  Q
    |||| ||||| ||||||||||||||| |||||||| ||||||||||    
T  3299362 tatagcactgatggtgctctttttgggatatattgtgtatgtaatt 3299407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 436 - 480
Target Start/End: Original strand, 11105613 - 11105657
Alignment:
Q  436 ataacactgctggtgctctttttggtatatattgcgtatgtaatt 480  Q
    ||||||||| ||||||||||||||| |||||||  ||||||||||    
T  11105613 ataacactgatggtgctctttttgggatatattatgtatgtaatt 11105657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 247; Significance: 1e-137; HSPs: 70)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 75 - 480
Target Start/End: Complemental strand, 7807495 - 7807079
Alignment:
Q  75 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgca-----------tcgatacttttcgatacgtatccggagagta 163  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||||||| || |           |||||||||  ||||||||||||||| ||||    
T  7807495 ctgtgaagccccgatacttcaaaatggatgacgtatcgtatcccctgcgtatcttgtaccgatacctgttcgatacttcccgatacgtatccggaaagta 7807396  T
Q  164 tccaaatattaaattttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtgttttttatattattttgatt 263  Q
    ||||||||||||||||||       || || ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7807395 tccaaatattaaattttatttttttaaaaaataactatccgatactttccgatacatcccgatacgcacggatacttgtgttttttatattattttgatt 7807296  T
Q  264 tctgnnnnnnnnnngtgtaaaaaataagaataaaaacattataaacgttagttacttgttagtgttaactcttagtactgatgtgttcnnnnnnnggata 363  Q
    ||||          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||    
T  7807295 tctgttttttttttgtgtaaaaaataagaataaaaacattataaacgttagttacttgttagtgttaactcttagtactgatgtgttctttttttggata 7807196  T
Q  364 tagtgattcttttttgaatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatgtataacactgctggtgctctttttggtat 463  Q
    |||||||||||||||| |||||||||||||| ||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||    
T  7807195 tagtgattcttttttggatcgatatagtataacactaacaaattccttttgaatatagtgtagcattgatgtataacattgctggtgctctttttggtat 7807096  T
Q  464 atattgcgtatgtaatt 480  Q
    |||||||||||||||||    
T  7807095 atattgcgtatgtaatt 7807079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 305 - 480
Target Start/End: Complemental strand, 40308235 - 40308060
Alignment:
Q  305 taaacgttagttacttgttagtgttaactcttagtactgatgtgttcnnnnnnnggatatagtgattcttttttgaatcgatatagtatagcactaacaa 404  Q
    |||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||| ||||||||||||||||||||||||    
T  40308235 taaacgttagttacttgttagtgttaactcttagtactgatgtgttctttttttggatatagtgattcttttttggatcgatatagtatagcactaacaa 40308136  T
Q  405 gttccttttggatatagtgtagcattgatgtataacactgctggtgctctttttggtatatattgcgtatgtaatt 480  Q
    ||||||||||||||||||||||||||||||||||||| || || ||||||||| ||||||||||| ||||||||||    
T  40308135 gttccttttggatatagtgtagcattgatgtataacattgatgatgctcttttcggtatatattgagtatgtaatt 40308060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 305 - 480
Target Start/End: Original strand, 22484988 - 22485163
Alignment:
Q  305 taaacgttagttacttgttagtgttaactcttagtactgatgtgttcnnnnnnnggatatagtgattcttttttgaatcgatatagtatagcactaacaa 404  Q
    |||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||| ||||||||||||||||||||||||    
T  22484988 taaacgttagttacttgttagtgttaactcttagtactgatgtgttctttttttggatatagtgattcttttttggatcgatatagtatagcactaacaa 22485087  T
Q  405 gttccttttggatatagtgtagcattgatgtataacactgctggtgctctttttggtatatattgcgtatgtaatt 480  Q
    ||||||||||||||||||||||||||||||| || |  || || ||||||||||||||||||||| ||||||||||    
T  22485088 gttccttttggatatagtgtagcattgatgtttatctttgatgttgctctttttggtatatattgtgtatgtaatt 22485163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 75 - 266
Target Start/End: Original strand, 7876711 - 7876913
Alignment:
Q  75 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac-----------ttttcgatacgtatccggagagta 163  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||           ||  ||||||||||||||||||||    
T  7876711 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagta 7876810  T
Q  164 tccaaatattaaattttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtgttttttatattattttgatt 263  Q
    ||||||||||||||||||       || || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7876811 tccaaatattaaattttattttttaaaaaaataattatccgatactttccgatacatcccgatacgcacggatacttgtgttttttatattattttgatt 7876910  T
Q  264 tct 266  Q
    |||    
T  7876911 tct 7876913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 305 - 480
Target Start/End: Complemental strand, 6497069 - 6496896
Alignment:
Q  305 taaacgttagttacttgttagtgttaactcttagtactgatgtgttcnnnnnnnggatatagtgattcttttttgaatcgatatagtatagcactaacaa 404  Q
    |||||||||||||||||||||||||||||||||||||||||||||||       |||||||||| |||||||||| ||||||||||||||| ||||||||    
T  6497069 taaacgttagttacttgttagtgttaactcttagtactgatgtgttctttttt-ggatatagtgcttcttttttggatcgatatagtataggactaacaa 6496971  T
Q  405 gttccttttggatatagtgtagcattgatgtataacactgctggtgctctttttggtatatattgcgtatgtaatt 480  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||| |||||||||||    
T  6496970 gttccttttggatatagtgtagcattgatgtataacactgatagtgctcttttt-gtatatatttcgtatgtaatt 6496896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 72 - 267
Target Start/End: Original strand, 33324812 - 33325018
Alignment:
Q  72 tggctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac-----------ttttcgatacgtatccggaga 160  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||           ||  |||||||||||||||||    
T  33324812 tggctgtgaagccccgatacttcaaaatggatgatgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggaga 33324911  T
Q  161 gtatccaaatattaaattttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtgttttttatattattttg 260  Q
    |||||||||||||||||||||       || || |||||||| ||||||||||||||| || ||||||||||||||||||||||| ||||||||||||||    
T  33324912 gtatccaaatattaaattttatttttaaaaaaaataattatctgatactttccgatacgtctcgatacgcacggatacttgtgttctttatattattttg 33325011  T
Q  261 atttctg 267  Q
    |||||||    
T  33325012 atttctg 33325018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 73 - 264
Target Start/End: Complemental strand, 40309020 - 40308818
Alignment:
Q  73 ggctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac-----------ttttcgatacgtatccggagag 161  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||| ||||||||||||| ||||||           ||  ||||||||||||||||||    
T  40309020 ggctgtgaagccccgatacttcaaaatagatgacgtaccgtatcccatgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagag 40308921  T
Q  162 tatccaaatattaaattttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtgttttttatattattttga 261  Q
    ||||||||||||||||||||       || || ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  40308920 tatccaaatattaaattttatttttaaaaaaaataattatccgatacttttcaatacatcccgatacgcacggatacttgtgttttttatattattttga 40308821  T
Q  262 ttt 264  Q
    |||    
T  40308820 ttt 40308818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 75 - 267
Target Start/End: Complemental strand, 38602443 - 38602240
Alignment:
Q  75 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgca-----------tcgatacttttcgatacgtatccggagagta 163  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||            ||||||||  ||||||||||||||||||||    
T  38602443 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagta 38602344  T
Q  164 tccaaatattaaattttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtgttttttatattattttgatt 263  Q
    ||||||||||||||||||       || || |||||||| |||||||||| |||| || ||||||||||||||||||||||| |||||||||||||||||    
T  38602343 tccaaatattaaattttatttttaaaaaaaataattatctgatactttccaatacgtctcgatacgcacggatacttgtgttctttatattattttgatt 38602244  T
Q  264 tctg 267  Q
    ||||    
T  38602243 tctg 38602240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 310 - 480
Target Start/End: Complemental strand, 4169914 - 4169745
Alignment:
Q  310 gttagttacttgttagtgttaactcttagtactgatgtgttcnnnnnnnggatatagtgattcttttttgaatcgatatagtatagcactaacaagttcc 409  Q
    ||||||||||||||||||||||||||||||||||||||||||       ||||||| || ||| |||||| |||||||||||||| ||||||||||||||    
T  4169914 gttagttacttgttagtgttaactcttagtactgatgtgttctttttttggatataatgcttcatttttggatcgatatagtataacactaacaagttcc 4169815  T
Q  410 ttttggatatagtgtagcattgatgtataacactgctggtgctctttttggtatatattgcgtatgtaatt 480  Q
    |||| |||||||| |||||||| |||||| ||||| ||||||||||||| ||| |||||||||||||||||    
T  4169814 tttttgatatagtttagcattggtgtatagcactgatggtgctcttttt-gtacatattgcgtatgtaatt 4169745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 305 - 480
Target Start/End: Original strand, 6124886 - 6125067
Alignment:
Q  305 taaacgttagttacttgttagtgttaactcttagtactgatgtgttcnnnnnnn------ggatatagtgattcttttttgaatcgatatagtatagcac 398  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||||             ||||||||||||||||||||| |||||||||||||| |||    
T  6124886 taaacgttagttacttgtttgtgttaactcttagtagtgatgtgttctttttttttttttggatatagtgattcttttttggatcgatatagtataacac 6124985  T
Q  399 taacaagttccttttggatatagtgtagcattgatgtataacactgctggtgctctttttggtatatattgcgtatgtaatt 480  Q
    |||||||||| ||||  ||||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||||||||    
T  6124986 taacaagttctttttatatatagtgtagcattgatgtatagcaccgatggtgctctttttggtatatattgcgtatgtaatt 6125067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 75 - 306
Target Start/End: Original strand, 16561797 - 16562041
Alignment:
Q  75 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac-----------ttttcgatacgtatccggagagta 163  Q
    ||||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||| ||||||           ||  ||||||||||||||||||||    
T  16561797 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccttgcgtattctgcaccgatacctgcccgatacttcccgatacgtatccggagagta 16561896  T
Q  164 tccaaatattaaattttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtgttttttatattattttgatt 263  Q
    ||||||||||||||||||       |  || ||||| |||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  16561897 tccaaatattaaattttatttttttataaaataattgtccgatgctttccgatacatcccaatacgcacggatacttgtgttttttatattattttgatt 16561996  T
Q  264 tctgnnnnnnnnnngtgt--aaaaaataagaataaaaacattata 306  Q
    ||||          ||||  |||||||||||||||||||||||||    
T  16561997 tctgttttttttttgtgtgtaaaaaataagaataaaaacattata 16562041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 75 - 267
Target Start/End: Original strand, 6124170 - 6124378
Alignment:
Q  75 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatacttttc-----------gatacgtatccggagagta 163  Q
    |||||||||||||||||||||||||||||||||||  |||||||||| |||||||||| |||||| | ||           |||||||||||||||||||    
T  6124170 ctgtgaagccccgatactttaaaatggatgacgtattgtatcccctgtgtatcctgcaccgatacatgtccgatacttcctgatacgtatccggagagta 6124269  T
Q  164 tccaaatattaaattttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtg-----ttttttatattattt 258  Q
    ||||||||||||||||||       || || ||||||||||||||||| |||||||||||||||||||||||||||||||     |||||||||||||||    
T  6124270 tccaaatattaaattttattttttaaaaaaataattatccgatactttgcgatacatcccgatacgcacggatacttgtgtttttttttttatattattt 6124369  T
Q  259 tgatttctg 267  Q
    |||||||||    
T  6124370 tgatttctg 6124378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 75 - 264
Target Start/End: Original strand, 18300969 - 18301169
Alignment:
Q  75 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac-----------ttttcgatacgtatccggagagta 163  Q
    ||||||||||| ||||||| ||||||||||||||| ||||||||||| |||| ||||| ||||||           || |||||||||||| ||||||||    
T  18300969 ctgtgaagccctgatacttcaaaatggatgacgtatcgtatcccctgtgtattctgcaccgatacctgtctgatacttctcgatacgtatcgggagagta 18301068  T
Q  164 tccaaatattaaattttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtgttttttatattattttgatt 263  Q
    ||||||||||||||||||       |  || ||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  18301069 tccaaatattaaattttattttttaagaaaataatttttcgatactttccgatacgtcccgatacgcacggatacttgtgttttttatattattttgatt 18301168  T
Q  264 t 264  Q
    |    
T  18301169 t 18301169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 78 - 264
Target Start/End: Original strand, 22570937 - 22571135
Alignment:
Q  78 tgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatactt---------ttc--gatacgtatccggagagtatcc 166  Q
    |||||||| ||||||| ||||| ||||||||||||||||| |||||||||||||| |||||| |         |||  ||||||||||||| ||||||||    
T  22570937 tgaagcccagatacttcaaaatagatgacgtaccgtatcctctgcgtatcctgcaccgatacctgcccgatacttcctgatacgtatccggggagtatcc 22571036  T
Q  167 aaatattaaattttannnnnnnaagaac-taattatccgatactttccgatacatcccgatacgcacggatacttgtgttttttatattattttgattt 264  Q
    |||||||||||||||       || ||  |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22571037 aaatattaaattttatttaaaaaaaaaaataataatctgatactttccgatacatcccgatacgcacggatacttgtgttttttatattattttgattt 22571135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 359 - 480
Target Start/End: Original strand, 12819576 - 12819696
Alignment:
Q  359 ggatatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatgtataacactgctggtgctctttt 457  Q
    |||||||||| |||||||||| ||||||||||||||||| ||||||  ||||||||||||||||| |||||||||  |||||||||| ||||||||||||    
T  12819576 ggatatagtgcttcttttttggatcgatatagtatagcattaacaatattccttttggatatagtatagcattga--tataacactggtggtgctctttt 12819673  T
Q  458 tggtatatattgcgtatgtaatt 480  Q
    |||||||| || |||||||||||    
T  12819674 tggtatattttacgtatgtaatt 12819696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 373 - 480
Target Start/End: Original strand, 20537114 - 20537222
Alignment:
Q  373 ttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatgtataacactgctggtgctctttttggtatatattgcg 471  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||| || |||||||||||||||||| | |||||||||||| ||||| ||||     
T  20537114 ttttttggatcgatatagtatagcactaacaatgttccttttggatatagtataacattgatgtataacactgattgtgctctttttgatatattttgct 20537213  T
Q  472 tatgtaatt 480  Q
    |||||||||    
T  20537214 tatgtaatt 20537222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 75 - 181
Target Start/End: Original strand, 20536772 - 20536879
Alignment:
Q  75 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatactt-ttcgatacgtatccggagagtatccaaatatt 173  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||||| ||||||||| ||||||||   ||||||||||| | ||||||||||||||||    
T  20536772 ctgtgaagccccgatacttcaaaatggatgacgtatcgtatcccctgcatatcctgcaccgatacttgcccgatacgtatcggaagagtatccaaatatt 20536871  T
Q  174 aaatttta 181  Q
    ||||||||    
T  20536872 aaatttta 20536879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 359 - 480
Target Start/End: Original strand, 5371336 - 5371456
Alignment:
Q  359 ggatatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatgtataacactgctggtgctctttt 457  Q
    |||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||   ||||||| |  |||||||||| ||||| | ||||    
T  5371336 ggatatagtgcttcttttttggatcgatatagtatagcactaacaatgttccttttggatataaaatagcattca--tataacactgatggtgttttttt 5371433  T
Q  458 tggtatatattgcgtatgtaatt 480  Q
    |||||||| ||||||||||||||    
T  5371434 tggtatattttgcgtatgtaatt 5371456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 75 - 181
Target Start/End: Complemental strand, 4170623 - 4170506
Alignment:
Q  75 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatc-----------gatacttttcgatacgtatccggagagta 163  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| |           |||||||  ||||||||||||||||||||    
T  4170623 ctgtgaagctccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcctgatacttcccgatacgtatccggagagta 4170524  T
Q  164 tccaaatattaaatttta 181  Q
    ||||||||||||||||||    
T  4170523 tccaaatattaaatttta 4170506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 76 - 181
Target Start/End: Complemental strand, 6497769 - 6497653
Alignment:
Q  76 tgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgata-----------cttttcgatacgtatccggagagtat 164  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| |||||           |||  |||||||||||||||||||||    
T  6497769 tgtgaagtcccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgtctgattcttcccgatacgtatccggagagtat 6497670  T
Q  165 ccaaatattaaatttta 181  Q
    |||||||||||||||||    
T  6497669 ccaaatattaaatttta 6497653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 78 - 181
Target Start/End: Original strand, 22484267 - 22484381
Alignment:
Q  78 tgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcat-----------cgatacttttcgatacgtatccggagagtatcc 166  Q
    |||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||           ||||||||  |||||||||||||||||||||||    
T  22484267 tgaagccccgatacttcaaaatggatgatgtaccgtattccctgcgtatcctgcatcgatatctgtccgatacttcccgatacgtatccggagagtatcc 22484366  T
Q  167 aaatattaaatttta 181  Q
    |||||||||||||||    
T  22484367 aaatattaaatttta 22484381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 78 - 181
Target Start/End: Original strand, 3563851 - 3563954
Alignment:
Q  78 tgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatacttttcgatacgtatccggagagtatccaaatattaaat 177  Q
    |||||||||||||||| |||||||||||||||  ||||||||| | ||| |||||  |||||||  ||||||||||| ||||||||||| || |||||||    
T  3563851 tgaagccccgatacttcaaaatggatgacgtattgtatcccctacatattctgcactgatacttcccgatacgtatcaggagagtatccgaagattaaat 3563950  T
Q  178 ttta 181  Q
    ||||    
T  3563951 ttta 3563954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 75 - 139
Target Start/End: Complemental strand, 28746773 - 28746709
Alignment:
Q  75 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac 139  Q
    ||||||||||||||||||| ||||||| ||||||| |||||||||||||||||||||| ||||||    
T  28746773 ctgtgaagccccgatacttcaaaatggttgacgtatcgtatcccctgcgtatcctgcaccgatac 28746709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 359 - 480
Target Start/End: Original strand, 18301356 - 18301469
Alignment:
Q  359 ggatatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatgtataacactgctggtgctctttt 457  Q
    ||||| |||| |||||||||| ||||||||| |||||||||| ||| |||||||||||||||| | || ||||||||||         ||||||||||||    
T  18301356 ggatacagtgcttcttttttggatcgatataatatagcactagcaatgttccttttggatataatataacattgatgta---------tggtgctctttt 18301446  T
Q  458 tggtatatattgcgtatgtaatt 480  Q
    |||||||| ||||||||||||||    
T  18301447 tggtatattttgcgtatgtaatt 18301469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 76 - 181
Target Start/End: Complemental strand, 45159418 - 45159312
Alignment:
Q  76 tgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgata-cttttcgatacgtatccggagagtatccaaatatta 174  Q
    |||||||||||||||||| ||||||||||||||| |||||||| |||||||| |||| | ||| ||   ||||||||||| | ||||||| | |||||||    
T  45159418 tgtgaagccccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcttgcaccaatatctgcccgatacgtatctgaagagtattcgaatatta 45159319  T
Q  175 aatttta 181  Q
    |||||||    
T  45159318 aatttta 45159312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 222 - 267
Target Start/End: Complemental strand, 4170485 - 4170440
Alignment:
Q  222 ccgatacgcacggatacttgtgttttttatattattttgatttctg 267  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  4170485 ccgatacgcacggatacttgtgttttttatattattttgatttctg 4170440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 75 - 132
Target Start/End: Complemental strand, 31236307 - 31236250
Alignment:
Q  75 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgca 132  Q
    ||||||||||||||||||||||||||||| |||||  |||||||||||||||||||||    
T  31236307 ctgtgaagccccgatactttaaaatggataacgtattgtatcccctgcgtatcctgca 31236250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 78 - 139
Target Start/End: Original strand, 35342317 - 35342378
Alignment:
Q  78 tgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac 139  Q
    ||||| |||||||||| |||||||||||||||||||||||| ||||||||||||| ||||||    
T  35342317 tgaagtcccgatacttcaaaatggatgacgtaccgtatcccttgcgtatcctgcaccgatac 35342378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 77 - 149
Target Start/End: Original strand, 1005512 - 1005584
Alignment:
Q  77 gtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatacttttcgatac 149  Q
    ||||||| | ||||||| ||||||||||||||| |||||||||||||||||||||| |||||| | |||||||    
T  1005512 gtgaagctctgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcaccgatacctgtcgatac 1005584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 77 - 141
Target Start/End: Original strand, 2319274 - 2319338
Alignment:
Q  77 gtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatactt 141  Q
    ||||| ||||||||||| ||||||||||||||| ||||||||||||||||| |||| ||||||||    
T  2319274 gtgaaaccccgatacttcaaaatggatgacgtatcgtatcccctgcgtatcttgcaccgatactt 2319338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 359 - 434
Target Start/End: Complemental strand, 31236043 - 31235967
Alignment:
Q  359 ggatatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatg 434  Q
    |||||||||| |||||||||  |||||||||||||| ||||||||| |||||||||||||||||| || ||||||||    
T  31236043 ggatatagtgcttcttttttagatcgatatagtataacactaacaatgttccttttggatatagtatatcattgatg 31235967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 209 - 267
Target Start/End: Original strand, 5371086 - 5371145
Alignment:
Q  209 tttccgatacatcccgatacgcacggatacttgtg-ttttttatattattttgatttctg 267  Q
    |||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  5371086 tttccgatacgtcccgatacacacggatacttgtgtttttttatattattttgatttctg 5371145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 362 - 428
Target Start/End: Original strand, 24585777 - 24585845
Alignment:
Q  362 tatagtgattcttttttgaatcgatatagtatagcactaacaa--gttccttttggatatagtgtagca 428  Q
    |||||||||||||||||| ||||||||||||||||||||||||   ||| ||||||||||||| |||||    
T  24585777 tatagtgattcttttttggatcgatatagtatagcactaacaatgtttctttttggatatagtatagca 24585845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 78 - 139
Target Start/End: Original strand, 44156597 - 44156658
Alignment:
Q  78 tgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac 139  Q
    |||| ||||||||||| |||||||||||| || ||||||||||||||||| |||||||||||    
T  44156597 tgaatccccgatacttcaaaatggatgacatatcgtatcccctgcgtatcatgcatcgatac 44156658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 75 - 139
Target Start/End: Complemental strand, 1776557 - 1776493
Alignment:
Q  75 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac 139  Q
    ||||||||||||||||||| ||||||| ||||||| |||||||| ||||||| ||||| ||||||    
T  1776557 ctgtgaagccccgatacttcaaaatggttgacgtatcgtatcccttgcgtattctgcaccgatac 1776493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 359 - 422
Target Start/End: Original strand, 2319536 - 2319600
Alignment:
Q  359 ggatatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagt 422  Q
    |||||||||| |||||||||| || ||||||||||| ||||||||| ||||||||||||||||||    
T  2319536 ggatatagtgcttcttttttggattgatatagtataacactaacaatgttccttttggatatagt 2319600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 78 - 218
Target Start/End: Original strand, 4355325 - 4355476
Alignment:
Q  78 tgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgca-----------tcgatacttttcgatacgtatccggagagtatcc 166  Q
    ||||||| |||||||| ||||||||||||||| ||||| |||||||||| |||||           | |||||||  ||||||||||| ||||||||| |    
T  4355325 tgaagcctcgatacttcaaaatggatgacgtatcgtattccctgcgtattctgcaccgatacctgcttgatacttcccgatacgtatcaggagagtatgc 4355424  T
Q  167 aaatattaaattttannnnnnnaagaactaattatccgatactttccgatac 218  Q
    ||| |||||||||||       || ||||||||||||||||||| |||||||    
T  4355425 aaagattaaattttattttttaaaaaactaattatccgatacttcccgatac 4355476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 75 - 131
Target Start/End: Original strand, 12819298 - 12819354
Alignment:
Q  75 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgc 131  Q
    ||||||||||| ||||||| ||||||||||| ||||||||||||||| |||||||||    
T  12819298 ctgtgaagccctgatacttcaaaatggatgatgtaccgtatcccctgtgtatcctgc 12819354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 78 - 138
Target Start/End: Original strand, 21104482 - 21104542
Alignment:
Q  78 tgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgata 138  Q
    ||||||||| |||||||||||||||||||||| ||||||| ||||||||| |||| |||||    
T  21104482 tgaagccccaatactttaaaatggatgacgtatcgtatcctctgcgtatcttgcaccgata 21104542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 362 - 428
Target Start/End: Original strand, 1005754 - 1005821
Alignment:
Q  362 tatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagtgtagca 428  Q
    ||||||| |||||||||| |||||||||||||| |||||||||  ||||||||||||||||| |||||    
T  1005754 tatagtgtttcttttttggatcgatatagtataacactaacaatattccttttggatatagtatagca 1005821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 370 - 428
Target Start/End: Original strand, 14824389 - 14824448
Alignment:
Q  370 ttcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagtgtagca 428  Q
    |||||||||| |||||||||||||||||||||||| |||| ||||||||||||| |||||    
T  14824389 ttcttttttggatcgatatagtatagcactaacaatgttctttttggatatagtatagca 14824448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 363 - 428
Target Start/End: Original strand, 4355555 - 4355621
Alignment:
Q  363 atagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagtgtagca 428  Q
    |||||| |||||||||| |||||||||||||| ||||||||| ||| |||||||||||||| |||||    
T  4355555 atagtgcttcttttttggatcgatatagtataacactaacaatgtttcttttggatatagtatagca 4355621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 76 - 181
Target Start/End: Original strand, 14824146 - 14824252
Alignment:
Q  76 tgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatacttttc-gatacgtatccggagagtatccaaatatta 174  Q
    ||||||| |||||||||| ||||| ||||||||| |||||| | |||||||| |||| |||||  | || |||||||||| | ||||||||| || ||||    
T  14824146 tgtgaagtcccgatacttcaaaatagatgacgtatcgtatctcttgcgtatcatgcaccgatatctgtctgatacgtatcagaagagtatccgaagatta 14824245  T
Q  175 aatttta 181  Q
    |||||||    
T  14824246 aatttta 14824252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 362 - 422
Target Start/End: Original strand, 4562031 - 4562092
Alignment:
Q  362 tatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagt 422  Q
    ||||||| |||||||||| || ||||||||||| ||||||||| ||||||||||||||||||    
T  4562031 tatagtgcttcttttttggattgatatagtatatcactaacaatgttccttttggatatagt 4562092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 222 - 267
Target Start/End: Complemental strand, 6497632 - 6497587
Alignment:
Q  222 ccgatacgcacggatacttgtgttttttatattattttgatttctg 267  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||    
T  6497632 ccgatacgcacggatacttgtattttttatattatttttatttctg 6497587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 78 - 139
Target Start/End: Original strand, 24585530 - 24585590
Alignment:
Q  78 tgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac 139  Q
    |||||||||||||||| ||||||||||| ||| ||||| |||||||||||||||| ||||||    
T  24585530 tgaagccccgatacttcaaaatggatgatgtatcgtat-ccctgcgtatcctgcaccgatac 24585590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 360 - 428
Target Start/End: Complemental strand, 45159032 - 45158963
Alignment:
Q  360 gatatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagtgtagca 428  Q
    ||||||||| |||||||||  ||||||||||||||||||||| || |||| ||||||||||||| |||||    
T  45159032 gatatagtgcttcttttttagatcgatatagtatagcactaaaaatgttctttttggatatagtatagca 45158963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 78 - 138
Target Start/End: Complemental strand, 14217272 - 14217212
Alignment:
Q  78 tgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgata 138  Q
    |||||| ||||||||| |||||||||||||||  ||||||||||||||| ||||| |||||    
T  14217272 tgaagctccgatacttcaaaatggatgacgtattgtatcccctgcgtattctgcaccgata 14217212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 78 - 181
Target Start/End: Original strand, 34146180 - 34146294
Alignment:
Q  78 tgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgata-----------cttttcgatacgtatccggagagtatcc 166  Q
    |||||| ||||||||||||||||||||||||| ||||||  |||||||| ||||| |||||           |||  ||||||||||| |||||||||||    
T  34146180 tgaagctccgatactttaaaatggatgacgtatcgtatcttctgcgtattctgcaccgatatctgcctgatacttcccgatacgtatcaggagagtatcc 34146279  T
Q  167 aaatattaaatttta 181  Q
    ||| |||||||||||    
T  34146280 aaagattaaatttta 34146294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 361 - 420
Target Start/End: Original strand, 35342580 - 35342640
Alignment:
Q  361 atatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatata 420  Q
    |||||||| |||||||||  |||||||||||||| ||||||||| ||||||||||||||||    
T  35342580 atatagtgtttcttttttagatcgatatagtataacactaacaatgttccttttggatata 35342640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 80 - 132
Target Start/End: Complemental strand, 37134414 - 37134362
Alignment:
Q  80 aagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgca 132  Q
    |||||| ||||||| ||||| ||||||||||||||||| ||||||||||||||    
T  37134414 aagcccagatacttcaaaatagatgacgtaccgtatcctctgcgtatcctgca 37134362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 78 - 138
Target Start/End: Original strand, 43214572 - 43214632
Alignment:
Q  78 tgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgata 138  Q
    ||||| || ||||||| ||||||||||||||| |||||||| || ||||||||||||||||    
T  43214572 tgaagtccagatacttcaaaatggatgacgtatcgtatcccatgtgtatcctgcatcgata 43214632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 77 - 139
Target Start/End: Original strand, 12206024 - 12206086
Alignment:
Q  77 gtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac 139  Q
    ||||||| ||| ||||||||||||||||||||| ||||||  ||| ||||| |||||||||||    
T  12206024 gtgaagctccggtactttaaaatggatgacgtatcgtatcatctgtgtatcttgcatcgatac 12206086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 75 - 139
Target Start/End: Original strand, 4561785 - 4561849
Alignment:
Q  75 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac 139  Q
    ||||||||| || |||||| ||||||||||||||| ||||| || || |||||||||| ||||||    
T  4561785 ctgtgaagctccaatacttcaaaatggatgacgtatcgtattccttgtgtatcctgcaccgatac 4561849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 75 - 139
Target Start/End: Original strand, 5588104 - 5588168
Alignment:
Q  75 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac 139  Q
    ||||||||| ||||||||| ||||||||||||||| ||||||| ||  ||||| |||| ||||||    
T  5588104 ctgtgaagctccgatacttcaaaatggatgacgtatcgtatcctctttgtatcttgcaccgatac 5588168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 211 - 247
Target Start/End: Original strand, 22484401 - 22484437
Alignment:
Q  211 tccgatacatcccgatacgcacggatacttgtgtttt 247  Q
    ||||||||||||||||||||| |||||||||||||||    
T  22484401 tccgatacatcccgatacgcatggatacttgtgtttt 22484437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 361 - 428
Target Start/End: Complemental strand, 28746538 - 28746470
Alignment:
Q  361 atatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagtgtagca 428  Q
    |||||||  |||||||||| |||||||||||||| || |||||| ||| |||||||||||||| |||||    
T  28746538 atatagttcttcttttttggatcgatatagtataacaataacaatgtttcttttggatatagtatagca 28746470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 359 - 434
Target Start/End: Original strand, 34146441 - 34146517
Alignment:
Q  359 ggatatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatg 434  Q
    ||||||| || || ||||||  || ||||||||||||||||||||  |||||||||||||||||| || ||||||||    
T  34146441 ggatataatgcttattttttagattgatatagtatagcactaacagtgttccttttggatatagtataacattgatg 34146517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 133 - 181
Target Start/End: Original strand, 35996709 - 35996757
Alignment:
Q  133 tcgatacttttcgatacgtatccggagagtatccaaatattaaatttta 181  Q
    |||||||||||||||||||||| ||||||||| | || |||||||||||    
T  35996709 tcgatacttttcgatacgtatcaggagagtattcgaagattaaatttta 35996757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 222 - 267
Target Start/End: Complemental strand, 45159242 - 45159195
Alignment:
Q  222 ccgatacgcacggatacttgtgtttttt--atattattttgatttctg 267  Q
    ||||||||||||||||| ||||||||||  ||||||||||||||||||    
T  45159242 ccgatacgcacggatacgtgtgttttttttatattattttgatttctg 45159195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 428
Target Start/End: Complemental strand, 8482785 - 8482726
Alignment:
Q  370 ttcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagtgtagca 428  Q
    |||||||||| ||||||||| |||| || |||||| |||||||||||||||||| |||||    
T  8482785 ttcttttttggatcgatataatataacattaacaatgttccttttggatatagtatagca 8482726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 209 - 244
Target Start/End: Original strand, 20536897 - 20536932
Alignment:
Q  209 tttccgatacatcccgatacgcacggatacttgtgt 244  Q
    |||||||||| |||||||||||||||||||||||||    
T  20536897 tttccgatacgtcccgatacgcacggatacttgtgt 20536932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 87 - 181
Target Start/End: Complemental strand, 40497495 - 40497389
Alignment:
Q  87 gatactttaaaa-tggatgacgtaccgtatcccctgcgtatcctgca----------tc-gatacttttcgatacgtatccggagagtatccaaatatta 174  Q
    |||||||||||| ||||||||||||| ||||||||||||||| ||||          || |||||||  ||||||||||| |||||||||||||| ||||    
T  40497495 gatactttaaaaatggatgacgtaccttatcccctgcgtatcttgcagtgatacctgtctgatacttcccgatacgtatcaggagagtatccaaagatta 40497396  T
Q  175 aatttta 181  Q
    |||||||    
T  40497395 aatttta 40497389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 84 - 138
Target Start/End: Complemental strand, 8483029 - 8482975
Alignment:
Q  84 cccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgata 138  Q
    |||||||||| |||||| |||||||| |||||||  ||||||||||||| |||||    
T  8483029 cccgatacttcaaaatgaatgacgtatcgtatcctttgcgtatcctgcaccgata 8482975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 78 - 132
Target Start/End: Original strand, 25933565 - 25933619
Alignment:
Q  78 tgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgca 132  Q
    ||||||||  |||||| ||||||||||| ||| ||||||||||||||||| ||||    
T  25933565 tgaagcccatatacttcaaaatggatgatgtatcgtatcccctgcgtatcatgca 25933619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 381 - 422
Target Start/End: Complemental strand, 40431879 - 40431837
Alignment:
Q  381 atcgatatagtatagcactaacaa-gttccttttggatatagt 422  Q
    |||||||||||||| ||||||||| ||||||||||||||||||    
T  40431879 atcgatatagtataacactaacaatgttccttttggatatagt 40431837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 446 - 480
Target Start/End: Complemental strand, 45158958 - 45158924
Alignment:
Q  446 tggtgctctttttggtatatattgcgtatgtaatt 480  Q
    |||||||||||||||||||||||| ||||||||||    
T  45158958 tggtgctctttttggtatatattgtgtatgtaatt 45158924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 166
Target Start/End: Original strand, 15880448 - 15880537
Alignment:
Q  78 tgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatacttttc-gatacgtatccggagagtatcc 166  Q
    ||||||||  |||||||||||| |||||||| || |||  | |||||||| |||| |||||| || | |||||||||| |||||||||||    
T  15880448 tgaagcccaaatactttaaaatagatgacgttccatatttcttgcgtatcttgcaccgataccttcctgatacgtatcaggagagtatcc 15880537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 417
Target Start/End: Original strand, 21104746 - 21104803
Alignment:
Q  361 atatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggat 417  Q
    |||||||| ||| |||||| |||||||||||||| |||||||||  ||||||||||||    
T  21104746 atatagtgcttcatttttgtatcgatatagtatatcactaacaatattccttttggat 21104803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 87 - 139
Target Start/End: Complemental strand, 40432102 - 40432051
Alignment:
Q  87 gatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac 139  Q
    ||||||||||||||||||| ||| ||||| ||||||  |||||||||||||||    
T  40432102 gatactttaaaatggatgaagtatcgtat-ccctgccaatcctgcatcgatac 40432051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 204; Significance: 1e-111; HSPs: 68)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 78 - 483
Target Start/End: Complemental strand, 38492377 - 38491988
Alignment:
Q  78 tgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatacttttc-gatacgtatccggagagtatccaaatattaaa 176  Q
    |||||||||||||||| |||||||||||||||| ||||||||||||||||||||| |||||| |  | ||||||||||||||||||||||||||||||||    
T  38492377 tgaagccccgatacttcaaaatggatgacgtactgtatcccctgcgtatcctgcaccgatacctgcccgatacgtatccggagagtatccaaatattaaa 38492278  T
Q  177 ttttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtgtttttt--atattattttgatttctgnnnnnnn 274  Q
    |||||       || || ||||||||||||||          |||||||||||||||||||||||||||||||  ||||||||||||||||||           
T  38492277 ttttatttttttaaaaaataattatccgatac----------atcccgatacgcacggatacttgtgttttttttatattattttgatttctgttttttt 38492188  T
Q  275 nnngtgtaaaaaataagaataaaaacattataaacgttagttacttgttagtgttaactcttagtactgatgtgttcnnnnnnnggatatagtgattctt 374  Q
       |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||       |||||||| |||||||    
T  38492187 t--gtgtaaaaaataagaacaaaaacattataaacgttagttacttgttagtgttaactcttagtaatgatgtgttctttttttggatatagggattctt 38492090  T
Q  375 ttttgaatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatgtataacactgctggtgctctttttggtatatattgcgtat 474  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||    
T  38492089 ttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatgtat-------ctggtgctctttttggtatatattgcgtat 38491997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 303 - 480
Target Start/End: Original strand, 14795726 - 14795903
Alignment:
Q  303 tataaacgttagttacttgttagtgttaactcttagtactgatgtgttcnnnnnnnggatatagtgattcttttttgaatcgatatagtatagcactaac 402  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||       ||||||||||||||||||| | ||||||||||||||||||||||    
T  14795726 tataaacgttagttacttgttagtgttaactcttagtattgatgtgttctttttttggatatagtgattctttttcggatcgatatagtatagcactaac 14795825  T
Q  403 aagttccttttggatatagtgtagcattgatgtataacactgctggtgctctttttggtatatattgcgtatgtaatt 480  Q
    |||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||    
T  14795826 aagttccttttggatacagtgtagcattgatgtatagcactgatggtgctctttttgatatatattgcgtatgtaatt 14795903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 305 - 480
Target Start/End: Complemental strand, 3402971 - 3402796
Alignment:
Q  305 taaacgttagttacttgttagtgttaactcttagtactgatgtgttcnnnnnnnggatatagtgattcttttttgaatcgatatagtatagcactaacaa 404  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||       ||||||||||||||||||||| |||||||||||||| |||||||||    
T  3402971 taaacgtcagttacttgctagtgttaactcttagtactgatgtgttctttttttggatatagtgattcttttttggatcgatatagtatatcactaacaa 3402872  T
Q  405 gttccttttggatatagtgtagcattgatgtataacactgctggtgctctttttggtatatattgcgtatgtaatt 480  Q
    |||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||    
T  3402871 gttccttttggatatagtgtagcattgatgtataacacttattgtgctctttttggtatatattgcgtatgtaatt 3402796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 305 - 480
Target Start/End: Original strand, 41146326 - 41146499
Alignment:
Q  305 taaacgttagttacttgttagtgttaactcttagtactgatgtgttcnnnnnnnggatatagtgattcttttttgaatcgatatagtatagcactaacaa 404  Q
    |||||||||||||||||||||||||||||||||||||||||||||||       |||||||||| ||||||||||||||||||||||||| |||||||||    
T  41146326 taaacgttagttacttgttagtgttaactcttagtactgatgtgttctttttt-ggatatagtgcttcttttttgaatcgatatagtataacactaacaa 41146424  T
Q  405 gttccttttggatatagtgtagcattgatgtataacactgctggtgctctttttggtatatattgcgtatgtaatt 480  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||    
T  41146425 gttccttttggatatagtgtagcattgatgtatagcactgatggtgctcttttt-gtatatattgcgtatgtaatt 41146499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 305 - 480
Target Start/End: Complemental strand, 8063494 - 8063316
Alignment:
Q  305 taaacgttagttacttgttagtgttaactcttagtactgatgtgttcnnnnnnnggatatagtgattcttttttgaatcgatatagtatagcactaacaa 404  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||| |||||||||||||| |||||||||    
T  8063494 taaacgtcagttacttgttagtgttaactcttagtactgatgtgttctttttttggatatagtgattcttttttggatcgatatagtatatcactaacaa 8063395  T
Q  405 gttccttttggatatagtgtagcattgatgtataacactgctggtgctct---ttttggtatatattgcgtatgtaatt 480  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||   ||||||||||||||||||||||||||    
T  8063394 gttcattttggatatagtgtagcattgatgtataacactgatggtgctcttaattttggtatatattgcgtatgtaatt 8063316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 305 - 480
Target Start/End: Original strand, 53323061 - 53323235
Alignment:
Q  305 taaacgttagttacttgttagtgttaactcttagtactgatgtgttcnnnnnnnggatatagtgattcttttttgaatcgatatagtatagcactaacaa 404  Q
    |||||||||||||||||||||||||||||||||||||||||||||||       ||||| |||| |||||||||| ||||||||||||||||||||||||    
T  53323061 taaacgttagttacttgttagtgttaactcttagtactgatgtgttctttttt-ggatacagtgcttcttttttggatcgatatagtatagcactaacaa 53323159  T
Q  405 gttccttttggatatagtgtagcattgatgtataacactgctggtgctctttttggtatatattgcgtatgtaatt 480  Q
    |||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||||||||| ||||||||||    
T  53323160 gttccttttggatatagtgtagcattgatgtatagcactgatgatgctctttttggtatatattgtgtatgtaatt 53323235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 305 - 480
Target Start/End: Original strand, 52572911 - 52573081
Alignment:
Q  305 taaacgttagttacttgttagtgttaactcttagtactgatgtgttcnnnnnnnggatatagtgattcttttttgaatcgatatagtatagcactaacaa 404  Q
    |||||||||||||||||||||||||||||||||||||||||||||||       |||||||||| ||    |||| ||||||||||||||||||||||||    
T  52572911 taaacgttagttacttgttagtgttaactcttagtactgatgtgttctttttt-ggatatagtgctt----tttggatcgatatagtatagcactaacaa 52573005  T
Q  405 gttccttttggatatagtgtagcattgatgtataacactgctggtgctctttttggtatatattgcgtatgtaatt 480  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| |||||||||||||    
T  52573006 gttccttttggatatagtgtagcattgatgtatagcactgatggtgctctttttggtatatactgcgtatgtaatt 52573081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 78 - 306
Target Start/End: Complemental strand, 5325839 - 5325600
Alignment:
Q  78 tgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac-----------ttttcgatacgtatccggagagtatcc 166  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||           ||  ||||||||||| |||||||||||    
T  5325839 tgaagccccgatactttaaaatggatgacgtattgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatctggagagtatcc 5325740  T
Q  167 aaatattaaattttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtgttttttatattattttgatttct 266  Q
    |||||||||||||||       || || ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5325739 aaatattaaattttatttttaaaaaaaataattatccgatatttttcgatacatcccgatacgcacggatacttgtgttttttatattattttgatttct 5325640  T
Q  267 gnnnnnnnnnngtgtaaaaaataagaataaaaacattata 306  Q
    |          |||||||||||||||||||||||||||||    
T  5325639 gttttttttttgtgtaaaaaataagaataaaaacattata 5325600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 78 - 267
Target Start/End: Complemental strand, 8064227 - 8064026
Alignment:
Q  78 tgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac-----------ttttcgatacgtatccggagagtatcc 166  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||           ||| ||||||||||||||||||||||     
T  8064227 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatactttccgatacgtatccggagagtatct 8064128  T
Q  167 aaatattaaattttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtgtt-ttttatattattttgatttc 265  Q
    |||||||||||||||       || || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  8064127 aaatattaaattttatttttttaaaaaataattatccgatactttccgatacatcccgatacgcacggatacttgtgtttttttatattattttgatttc 8064028  T
Q  266 tg 267  Q
    ||    
T  8064027 tg 8064026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 79 - 267
Target Start/End: Original strand, 19738698 - 19738898
Alignment:
Q  79 gaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac-----------ttttcgatacgtatccggagagtatcca 167  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||           ||  ||||||||||||||||||||||||    
T  19738698 gaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagtatcca 19738797  T
Q  168 aatattaaattttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtg-ttttttatattattttgatttct 266  Q
    ||||||||||||||       || || ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  19738798 aatattaaattttatttttttaaaaaataattatccgatactttccgatacatcccgatacgcacggatacttgtgtttttttatattattttgatttct 19738897  T
Q  267 g 267  Q
    |    
T  19738898 g 19738898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 77 - 264
Target Start/End: Complemental strand, 3403694 - 3403506
Alignment:
Q  77 gtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgata-cttttcgatacgtatccggagagtatccaaatattaa 175  Q
    |||||||||| |||||| ||||||||||||||||||||||||||| ||||||||||  |||| |||  ||||||||||||||||||||||||||||||||    
T  3403694 gtgaagccccaatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcactgatatcttcccgatacgtatccggagagtatccaaatattaa 3403595  T
Q  176 attttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtg-ttttttatattattttgattt 264  Q
    ||||||       || || |||||||||||||||||||||||||| |||||| ||||||||||||||| |||||||||||||||||||||    
T  3403594 attttattttaaaaaaaaataattatccgatactttccgatacat-ccgatatgcacggatacttgtgtttttttatattattttgattt 3403506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 75 - 306
Target Start/End: Complemental strand, 52122990 - 52122748
Alignment:
Q  75 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac-----------ttttcgatacgtatccggagagta 163  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||           ||  ||||||||||||||||||||    
T  52122990 ctgtgaagccccgatacttcaaaatggatgacgtactgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagta 52122891  T
Q  164 tccaaatattaaattttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtgttttttatattattttgatt 263  Q
    ||||||||||||||||||       || || |||||||| ||||||||||||||| || ||||||||||||||||||||||| |||||||||||||||||    
T  52122890 tccaaatattaaattttatttttttaaaaaataattatctgatactttccgatacgtctcgatacgcacggatacttgtgttctttatattattttgatt 52122791  T
Q  264 tctgnnnnnnnnnngtgtaaaaaataagaataaaaacattata 306  Q
    ||||           |||||||||| |||||||||||||||||    
T  52122790 tctgttttttttttttgtaaaaaatcagaataaaaacattata 52122748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 305 - 480
Target Start/End: Original strand, 31227059 - 31227236
Alignment:
Q  305 taaacgttagttacttgttagtgttaactcttagtactgatgtgttcnnnnnnngg--atatagtgattcttttttgaatcgatatagtatagcactaac 402  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||           ||||||| ||||||||||| ||||||||||||||||||||||    
T  31227059 taaatgttagttacttgttagtgttaactctttgtactgatgtgttctttttttttttatatagtaattcttttttggatcgatatagtatagcactaac 31227158  T
Q  403 aagttccttttggatatagtgtagcattgatgtataacactgctggtgctctttttggtatatattgcgtatgtaatt 480  Q
    |||||||||||||||||||||||||||||||||||| ||||  || ||||||||||||||| ||||||| ||||||||    
T  31227159 aagttccttttggatatagtgtagcattgatgtatagcactcatgatgctctttttggtatgtattgcgcatgtaatt 31227236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 76 - 267
Target Start/End: Original strand, 53322335 - 53322538
Alignment:
Q  76 tgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgca-----------tcgatacttttcgatacgtatccggagagtat 164  Q
    |||||||||||||||||| ||||||||||||||| |||||||  |||||||||||||           |||||||||  |||||||||||||||||||||    
T  53322335 tgtgaagccccgatacttcaaaatggatgacgtatcgtatcctttgcgtatcctgcactgataccggctcgatacttcccgatacgtatccggagagtat 53322434  T
Q  165 ccaaatattaaattttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtg-ttttttatattattttgatt 263  Q
    |||||||||||||||||       || || |||||||||||||||||||||||  |||||||||||||||||||||||| ||||||||||||||||||||    
T  53322435 ccaaatattaaattttatttttttaaaaaataattatccgatactttccgatatgtcccgatacgcacggatacttgtgtttttttatattattttgatt 53322534  T
Q  264 tctg 267  Q
    ||||    
T  53322535 tctg 53322538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 359 - 480
Target Start/End: Original strand, 28377271 - 28377393
Alignment:
Q  359 ggatatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatgtataacactgctggtgctctttt 457  Q
    |||||||||| |||||||||| |||||||||||||||||||||||| |||| ||||||||||| | ||||||||||||||||||||| ||||||||||||    
T  28377271 ggatatagtgcttcttttttggatcgatatagtatagcactaacaatgttctttttggatataatatagcattgatgtataacactgatggtgctctttt 28377370  T
Q  458 tggtatatattgcgtatgtaatt 480  Q
    || ||||| ||||||||||||||    
T  28377371 tgttatattttgcgtatgtaatt 28377393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 377 - 480
Target Start/End: Complemental strand, 5325344 - 5325241
Alignment:
Q  377 ttgaatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatgtataacactgctggtgctctttttggtatatattgcgtatgt 476  Q
    |||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||| ||||  |||||||||||||||||||||||||||||||    
T  5325344 ttgaatcgatatagcataacactaacaagttccttttggatataatgtagcattgatgtatagcacttatggtgctctttttggtatatattgcgtatgt 5325245  T
Q  477 aatt 480  Q
    ||||    
T  5325244 aatt 5325241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 74 - 267
Target Start/End: Original strand, 14795019 - 14795192
Alignment:
Q  74 gctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatacttttcgatacgtatccggagagtatccaaatatt 173  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||           ||||||||||||||||||||||||||||||    
T  14795019 gctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgca----------ccgatacgtatccggagagtatccaaatatt 14795108  T
Q  174 aaattttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtgttttttatattattttgatttctg 267  Q
    |||||||        || || ||||||          |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  14795109 aaatttttttcttttaaaaaataatta----------tccgatacatcccgatacacacggatacttgtgttttttatattattttgatttctg 14795192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 70 - 267
Target Start/End: Complemental strand, 42472695 - 42472497
Alignment:
Q  70 attggctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatactt---------ttcg--atacgtatccgga 158  Q
    |||| |||||||| |||||||||| |||||||||||||||| |||| |||||||||||||||| ||||||||         |||   |||||||||||||    
T  42472695 attgactgtgaagtcccgatacttcaaaatggatgacgtactgtattccctgcgtatcctgcaccgatacttgcccgatacttcccaatacgtatccgga 42472596  T
Q  159 gagtatccaaatattaaattttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtgttttttatattattt 258  Q
    |||||||||||||||||||||||       || || ||||||||||||||          ||||||||||||||||||||||||||||||||||||||||    
T  42472595 gagtatccaaatattaaattttatttttaaaaaaaataattatccgatac----------atcccgatacgcacggatacttgtgttttttatattattt 42472506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 78 - 267
Target Start/End: Original strand, 52572210 - 52572388
Alignment:
Q  78 tgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatacttttcgatacgtatccggagagtatccaaatattaaat 177  Q
    ||||||||||||||||||||||||||||||| |||||||||||| | ||| |||| |||||| |  |           ||||||||||||||||||||||    
T  52572210 tgaagccccgatactttaaaatggatgacgttccgtatcccctgtgcatcatgcaccgatacctgcct----------ggagagtatccaaatattaaat 52572299  T
Q  178 tttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtgttttttatattattttgatttctg 267  Q
    ||||       || || |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| |||||||    
T  52572300 tttatttttaaaaaaa-taattatccgatactttccgatacgtcccaatacgcacggatacttgtgttttttatattatttttatttctg 52572388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 359 - 480
Target Start/End: Original strand, 5835204 - 5835324
Alignment:
Q  359 ggatatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatgtataacactgctggtgctctttt 457  Q
    |||||||||| |||||||||  ||||||||||||||||| |||||| |||||||||||||||||| || ||||||  ||||||| || ||||||||||||    
T  5835204 ggatatagtgcttctttttttgatcgatatagtatagcattaacaatgttccttttggatatagtataacattga--tataacattgatggtgctctttt 5835301  T
Q  458 tggtatatattgcgtatgtaatt 480  Q
    || ||||| ||||||||||||||    
T  5835302 tgatatattttgcgtatgtaatt 5835324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 75 - 181
Target Start/End: Original strand, 41145609 - 41145726
Alignment:
Q  75 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcat-----------cgatacttttcgatacgtatccggagagta 163  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||           ||||||||| |||||||||| |||||||||    
T  41145609 ctgtgaagccccgatacttcaaaatggatgacgtactgtatcccctgcgtatcctgcatcgatacctgtccgatactttccgatacgtattcggagagta 41145708  T
Q  164 tccaaatattaaatttta 181  Q
    ||||||||||||||||||    
T  41145709 tccaaatattaaatttta 41145726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 74 - 267
Target Start/End: Original strand, 5834826 - 5835022
Alignment:
Q  74 gctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgata-----------cttttcgatacgtatccggagagt 162  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| |||||           |||  ||||||||||| |||||||    
T  5834826 gctgtgaagctccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatgcttcccgatacgtatcgggagagt 5834925  T
Q  163 atccaaatattaaattttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtg--ttttttatattattttg 260  Q
    |||||||||||||||||||       |||||  ||| ||       |||||||||| ||||||||||||||||||||||||  |||||||||||||||||    
T  5834926 atccaaatattaaatttta-ttttttaagaa--aataat-------tttccgatacgtcccgatacgcacggatacttgtgttttttttatattattttg 5835015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 75 - 245
Target Start/End: Original strand, 28376993 - 28377174
Alignment:
Q  75 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgca-----------tcgatacttttcgatacgtatccggagagta 163  Q
    ||||||||||||||||||| ||||||||||||||| |||||| |||| ||||||||||            ||||||||||||||||||| | ||||||||    
T  28376993 ctgtgaagccccgatacttcaaaatggatgacgtatcgtatctcctgtgtatcctgcaccgatacctacccgatacttttcgatacgtaccgggagagta 28377092  T
Q  164 tccaaatattaaattttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtgtt 245  Q
    ||||||||||||||||||       |  || ||||| ||| ||||||| |||||| ||  ||||||||||||||||||||||    
T  28377093 tccaaatattaaattttattttttaagaaaataattttccaatacttttcgatacttcttgatacgcacggatacttgtgtt 28377174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 43501381 - 43501436
Alignment:
Q  19 gtcggtagtttccattaactgttttacttgacaagtgcttgagtaaaggatattgg 74  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  43501381 gtcggtagtttccattaactgttttgcttgacaagtgcttgagtaaaggatattgg 43501436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 384 - 480
Target Start/End: Complemental strand, 43509755 - 43509660
Alignment:
Q  384 gatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatgtataacactgctggtgctctttttggtatatattgcgtatgtaatt 480  Q
    |||||||||||||| |||||| ||||||||| |||||| | ||||||||||  |||| |||| |||||||||||||||||||| ||||||||||||||    
T  43509755 gatatagtatagcattaacaatgttccttttagatataatatagcattgat--ataatactgatggtgctctttttggtatattttgcgtatgtaatt 43509660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 134 - 224
Target Start/End: Original strand, 39957631 - 39957721
Alignment:
Q  134 cgatacttttcgatacgtatccggagagtatccaaatattaaattttannnnnnnaagaactaattatccgatactttccgatacatcccg 224  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||||       || || |||||||||||||||||||||||| |||||    
T  39957631 cgatacttctcgatacgtatccggagagtatccgaatattaaattttatttttttaaaaaataattatccgatactttccgatacgtcccg 39957721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 78 - 129
Target Start/End: Original strand, 2586336 - 2586387
Alignment:
Q  78 tgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcct 129  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  2586336 tgaagccccgatactttaaaatggatgacgtaccgtatcccctgagtatcct 2586387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 77 - 139
Target Start/End: Complemental strand, 31946324 - 31946262
Alignment:
Q  77 gtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac 139  Q
    |||||||  |||||||||||||||||||||||| ||||| |||||||||||||||| ||||||    
T  31946324 gtgaagcttcgatactttaaaatggatgacgtatcgtattccctgcgtatcctgcaccgatac 31946262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 88 - 218
Target Start/End: Original strand, 52721274 - 52721415
Alignment:
Q  88 atactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatc-----------gatacttttcgatacgtatccggagagtatccaaatattaaa 176  Q
    |||||| ||||| ||||||||| |||||||||||||||||||||| |           |||||||  |||||||||| ||||||||||||||||||||||    
T  52721274 atacttcaaaatagatgacgtatcgtatcccctgcgtatcctgcaccgatatctgcctgatacttcccgatacgtattcggagagtatccaaatattaaa 52721373  T
Q  177 ttttannnnnnnaagaactaattatccgatactttccgatac 218  Q
    |||||       |  || ||||||||||||||||||||||||    
T  52721374 ttttatttttttataaaataattatccgatactttccgatac 52721415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 222 - 267
Target Start/End: Original strand, 31226098 - 31226143
Alignment:
Q  222 ccgatacgcacggatacttgtgttttttatattattttgatttctg 267  Q
    |||||||||| |||||||||||||||||||||||||||||||||||    
T  31226098 ccgatacgcatggatacttgtgttttttatattattttgatttctg 31226143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 75 - 132
Target Start/End: Original strand, 47607107 - 47607164
Alignment:
Q  75 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgca 132  Q
    ||||||||||||||||||| |||||||||||| || |||||| |||||||||||||||    
T  47607107 ctgtgaagccccgatacttcaaaatggatgacatatcgtatctcctgcgtatcctgca 47607164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 80 - 129
Target Start/End: Original strand, 51858834 - 51858883
Alignment:
Q  80 aagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcct 129  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  51858834 aagccccgatactttaaaatggatgacgtatcgtatctcctgcgtatcct 51858883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 78 - 139
Target Start/End: Complemental strand, 55901257 - 55901196
Alignment:
Q  78 tgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac 139  Q
    |||| ||||||||||||||||| ||||||||| ||||||||||| |||||||||| ||||||    
T  55901257 tgaaaccccgatactttaaaatagatgacgtatcgtatcccctgtgtatcctgcaccgatac 55901196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 75 - 139
Target Start/End: Original strand, 10257697 - 10257761
Alignment:
Q  75 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac 139  Q
    ||||||||||||||||||| ||||||||||| ||| ||||||| |||||||| ||| ||||||||    
T  10257697 ctgtgaagccccgatacttcaaaatggatgatgtatcgtatccgctgcgtattctgtatcgatac 10257761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 361 - 422
Target Start/End: Complemental strand, 3109160 - 3109098
Alignment:
Q  361 atatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagt 422  Q
    |||||||| |||||||||  |||||||||||||| ||||||||| ||||||||||||||||||    
T  3109160 atatagtgtttcttttttagatcgatatagtataacactaacaatgttccttttggatatagt 3109098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 361 - 422
Target Start/End: Complemental strand, 24793586 - 24793524
Alignment:
Q  361 atatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagt 422  Q
    |||||||| |||||||||  |||||||||||||| ||||||||| ||||||||||||||||||    
T  24793586 atatagtgtttcttttttagatcgatatagtataacactaacaatgttccttttggatatagt 24793524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 78 - 139
Target Start/End: Original strand, 40694070 - 40694131
Alignment:
Q  78 tgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac 139  Q
    |||||||||||||||| ||||||||||| ||| |||||||| ||||||| ||||| ||||||    
T  40694070 tgaagccccgatacttcaaaatggatgatgtatcgtatcccatgcgtattctgcaccgatac 40694131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 359 - 418
Target Start/End: Complemental strand, 42630335 - 42630275
Alignment:
Q  359 ggatatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggata 418  Q
    ||||||| || ||||||||||||||||| ||||||| ||||||||| ||||||||||||||    
T  42630335 ggatataatgcttcttttttgaatcgatgtagtataacactaacaatgttccttttggata 42630275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 361 - 428
Target Start/End: Complemental strand, 44521901 - 44521833
Alignment:
Q  361 atatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagtgtagca 428  Q
    ||||| || |||||||||| |||||||||||||| || |||||| |||||||||||||||||| |||||    
T  44521901 atataatgcttcttttttggatcgatatagtataacattaacaatgttccttttggatatagtatagca 44521833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 359 - 434
Target Start/End: Complemental strand, 55901005 - 55900929
Alignment:
Q  359 ggatatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatg 434  Q
    ||||||| || |||||||||| |||||||||||||| ||||||||| |||| ||||||||||| | ||||| |||||    
T  55901005 ggatataatgcttcttttttggatcgatatagtataacactaacaatgttcattttggatataatatagcactgatg 55900929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 370 - 428
Target Start/End: Original strand, 1177227 - 1177286
Alignment:
Q  370 ttcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagtgtagca 428  Q
    |||||||||| || ||||||||||||||||||||| ||| |||||||||||||| |||||    
T  1177227 ttcttttttggattgatatagtatagcactaacaatgtttcttttggatatagtatagca 1177286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 362 - 428
Target Start/End: Complemental strand, 36511809 - 36511742
Alignment:
Q  362 tatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagtgtagca 428  Q
    ||||||| |||||||||| ||||||||| ||||||||||| || ||| |||||||||||||| |||||    
T  36511809 tatagtgcttcttttttggatcgatataatatagcactaagaatgtttcttttggatatagtatagca 36511742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 78 - 141
Target Start/End: Complemental strand, 36512052 - 36511989
Alignment:
Q  78 tgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatactt 141  Q
    |||||||||||||||| ||||||| |||||||  ||||||| ||||||||||||  ||||||||    
T  36512052 tgaagccccgatacttcaaaatggttgacgtattgtatcccgtgcgtatcctgcgccgatactt 36511989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 360 - 422
Target Start/End: Original strand, 39957950 - 39958013
Alignment:
Q  360 gatatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagt 422  Q
    ||||||||| |||||||||  |||||||||||||||||||||||| |||| |||| ||||||||    
T  39957950 gatatagtgcttcttttttagatcgatatagtatagcactaacaatgttctttttagatatagt 39958013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 370 - 420
Target Start/End: Original strand, 40694320 - 40694371
Alignment:
Q  370 ttcttttttgaatcgatatagtatagcactaacaa-gttccttttggatata 420  Q
    |||||||||||||||||||||||||| |||||||| ||| ||||||||||||    
T  40694320 ttcttttttgaatcgatatagtatagtactaacaatgtttcttttggatata 40694371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 370 - 428
Target Start/End: Original strand, 51859045 - 51859104
Alignment:
Q  370 ttcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagtgtagca 428  Q
    |||||||||| |||||||||||||| ||||||||| ||| |||||||||||||| |||||    
T  51859045 ttcttttttggatcgatatagtataacactaacaatgtttcttttggatatagtatagca 51859104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 360 - 434
Target Start/End: Original strand, 52721616 - 52721691
Alignment:
Q  360 gatatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatg 434  Q
    ||||||||| |||||||||  |||||||||||||| ||||||||| |||| ||||| ||||||| || ||||||||    
T  52721616 gatatagtgcttcttttttagatcgatatagtataacactaacaatgttctttttgaatatagtatatcattgatg 52721691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 78 - 132
Target Start/End: Original strand, 1176981 - 1177035
Alignment:
Q  78 tgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgca 132  Q
    |||||||||||||||| ||||| | ||||||| |||||||||| |||||||||||    
T  1176981 tgaagccccgatacttcaaaatagttgacgtatcgtatcccctacgtatcctgca 1177035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 361 - 422
Target Start/End: Original strand, 36943932 - 36943994
Alignment:
Q  361 atatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagt 422  Q
    |||||||| |||||||||  ||||||||||||||  |||||||| ||||||||||||||||||    
T  36943932 atatagtgtttcttttttagatcgatatagtataatactaacaatgttccttttggatatagt 36943994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 381 - 434
Target Start/End: Original strand, 49470559 - 49470613
Alignment:
Q  381 atcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatg 434  Q
    |||||||||||||  ||||||||| |||||||||||||||||| |||||||||||    
T  49470559 atcgatatagtatgtcactaacaatgttccttttggatatagtatagcattgatg 49470613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 360 - 428
Target Start/End: Original strand, 24784634 - 24784703
Alignment:
Q  360 gatatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagtgtagca 428  Q
    ||||||||| |||||||||  || ||||||||||||||||| ||| |||| ||||||||||||| |||||    
T  24784634 gatatagtgcttcttttttagattgatatagtatagcactatcaatgttctttttggatatagtatagca 24784703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 360 - 428
Target Start/End: Complemental strand, 24823632 - 24823563
Alignment:
Q  360 gatatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagtgtagca 428  Q
    ||||||||| |||||||||  || ||||||||||||||||| ||| |||| ||||||||||||| |||||    
T  24823632 gatatagtgcttcttttttagattgatatagtatagcactatcaatgttctttttggatatagtatagca 24823563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 85 - 141
Target Start/End: Original strand, 24296505 - 24296561
Alignment:
Q  85 ccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatactt 141  Q
    |||||| |||||||||||||||||||||||||  ||||||||| | || ||||||||    
T  24296505 ccgatagtttaaaatggatgacgtaccgtatcatctgcgtatcatacaccgatactt 24296561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 85 - 181
Target Start/End: Complemental strand, 24793833 - 24793735
Alignment:
Q  85 ccgatactttaaaatggatgacgtaccgtatcccctgcgt--at-cctgcatcgatacttttcgatacgtatccggagagtatccaaatattaaatttta 181  Q
    |||||||||||||||||||||||||||||||  ||||| |  || ||||  |  ||||||||||||||||||| | ||||||||| || |||||||||||    
T  24793833 ccgatactttaaaatggatgacgtaccgtatatcctgcatcgatacctgtct-aatacttttcgatacgtatcagaagagtatccgaagattaaatttta 24793735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 211 - 267
Target Start/End: Original strand, 41145747 - 41145803
Alignment:
Q  211 tccgatacatcccgatacgcacggatacttgtgttttttatattattttgatttctg 267  Q
    |||||||| | ||||||||||| |||| ||||| ||||||||||||||| |||||||    
T  41145747 tccgatactttccgatacgcacagataattgtggtttttatattattttaatttctg 41145803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 88 - 139
Target Start/End: Original strand, 21058843 - 21058894
Alignment:
Q  88 atactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac 139  Q
    ||||||||||||| |||||||| ||||||| ||| |||||||||| ||||||    
T  21058843 atactttaaaatgaatgacgtagcgtatccactgtgtatcctgcaccgatac 21058894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 434 - 480
Target Start/End: Complemental strand, 3109099 - 3109053
Alignment:
Q  434 gtataacactgctggtgctctttttggtatatattgcgtatgtaatt 480  Q
    ||||||||| | ||||||||||||||| |||||||| ||||||||||    
T  3109099 gtataacacagatggtgctctttttgggatatattgtgtatgtaatt 3109053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 134 - 168
Target Start/End: Complemental strand, 3109287 - 3109253
Alignment:
Q  134 cgatacttttcgatacgtatccggagagtatccaa 168  Q
    |||||||| ||||||||||||||||||||||||||    
T  3109287 cgatacttctcgatacgtatccggagagtatccaa 3109253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 361 - 422
Target Start/End: Original strand, 17892511 - 17892573
Alignment:
Q  361 atatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagt 422  Q
    |||||||| |||||||||  || ||||||||||| ||||||||| |||||||||| |||||||    
T  17892511 atatagtgtttcttttttagattgatatagtataacactaacaatgttccttttgaatatagt 17892573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 434 - 480
Target Start/End: Original strand, 17892572 - 17892618
Alignment:
Q  434 gtataacactgctggtgctctttttggtatatattgcgtatgtaatt 480  Q
    ||||||||||| || ||||||||||||| ||||||| ||||||||||    
T  17892572 gtataacactgatgatgctctttttggtttatattgtgtatgtaatt 17892618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 434 - 480
Target Start/End: Original strand, 36943993 - 36944039
Alignment:
Q  434 gtataacactgctggtgctctttttggtatatattgcgtatgtaatt 480  Q
    ||||||||||| || |||||||||||| |||||||| ||||||||||    
T  36943993 gtataacactgatgatgctctttttgggatatattgtgtatgtaatt 36944039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 135 - 181
Target Start/End: Complemental strand, 37992583 - 37992537
Alignment:
Q  135 gatacttttcgatacgtatccggagagtatccaaatattaaatttta 181  Q
    |||||||| ||||||||||| | |||||||||||| |||||||||||    
T  37992583 gatactttccgatacgtatcagaagagtatccaaagattaaatttta 37992537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 434 - 480
Target Start/End: Original strand, 39958012 - 39958058
Alignment:
Q  434 gtataacactgctggtgctctttttggtatatattgcgtatgtaatt 480  Q
    ||||||||| | || ||||||||||||||||||||| ||||||||||    
T  39958012 gtataacaccgatgatgctctttttggtatatattgtgtatgtaatt 39958058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 127
Target Start/End: Original strand, 17892248 - 17892297
Alignment:
Q  78 tgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatc 127  Q
    |||||| ||||||||| |||||||| ||||||||||||| | ||||||||    
T  17892248 tgaagctccgatacttcaaaatggacgacgtaccgtatctcatgcgtatc 17892297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 139
Target Start/End: Complemental strand, 44121960 - 44121899
Alignment:
Q  78 tgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac 139  Q
    ||||||||  |||||| |||||||| |||||| ||||||  |||||||||||||| ||||||    
T  44121960 tgaagcccacatacttcaaaatggacgacgtatcgtatcttctgcgtatcctgcaccgatac 44121899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 278 - 306
Target Start/End: Complemental strand, 8064012 - 8063984
Alignment:
Q  278 gtgtaaaaaataagaataaaaacattata 306  Q
    |||||||||||||||||||||||||||||    
T  8064012 gtgtaaaaaataagaataaaaacattata 8063984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 278 - 306
Target Start/End: Original strand, 14795210 - 14795238
Alignment:
Q  278 gtgtaaaaaataagaataaaaacattata 306  Q
    |||||||||||||||||||||||||||||    
T  14795210 gtgtaaaaaataagaataaaaacattata 14795238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 373 - 428
Target Start/End: Original strand, 47607354 - 47607410
Alignment:
Q  373 ttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagtgtagca 428  Q
    ||||||| ||||||||| |||||||| ||||| ||| |||||||||||||| |||||    
T  47607354 ttttttggatcgatataatatagcaccaacaatgtttcttttggatatagtatagca 47607410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 135; Significance: 4e-70; HSPs: 72)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 305 - 480
Target Start/End: Original strand, 9793017 - 9793192
Alignment:
Q  305 taaacgttagttacttgttagtgttaactcttagtactgatgtgttcnnnnnnnggatatagtgattcttttttgaatcgatatagtatagcactaacaa 404  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||| |||||||||||||| |||||||||    
T  9793017 taaacgtcagttacttgttagtgttaactcttagtactgatgtgttctttttttggatatagtgattcttttttggatcgatatagtatatcactaacaa 9793116  T
Q  405 gttccttttggatatagtgtagcattgatgtataacactgctggtgctctttttggtatatattgcgtatgtaatt 480  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  9793117 gttcattttggatatagtgtagcattgatgtataacactgatggtgctctttttggtatatattgcgtatgtaatt 9793192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 305 - 480
Target Start/End: Complemental strand, 39690128 - 39689953
Alignment:
Q  305 taaacgttagttacttgttagtgttaactcttagtactgatgtgttcnnnnnnnggatatagtgattcttttttgaatcgatatagtatagcactaacaa 404  Q
    |||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||| |||||||||||||| |||||||||    
T  39690128 taaacgttagttacttgttagtgttaactcttagtactgatgtgttctttttttggatatagtgattcttttttggatcgatatagtataacactaacaa 39690029  T
Q  405 gttccttttggatatagtgtagcattgatgtataacactgctggtgctctttttggtatatattgcgtatgtaatt 480  Q
    |||||||||||||||||||||||||||||||||| |  || |||||||||||||||||||||||| ||||||||||    
T  39690028 gttccttttggatatagtgtagcattgatgtatagctatgatggtgctctttttggtatatattgtgtatgtaatt 39689953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 74 - 264
Target Start/End: Complemental strand, 26795115 - 26794923
Alignment:
Q  74 gctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatacttttcgatacgtatccggagagtatccaaatatt 173  Q
    |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  26795115 gctgtgaagccctgatactttaaaatggatgacgtatcgtatcccctgcgtatcctgcaccgatactttccgatacgtatccggagagtatccaaatatt 26795016  T
Q  174 aaattttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtg--ttttttatattattttgattt 264  Q
    ||||||||       || || ||||||||||||||||| |||||||| ||||||||||||||||||||||  |||||||||||||||| ||||    
T  26795015 aaattttattttttaaaaaaataattatccgatacttttcgatacataccgatacgcacggatacttgtgttttttttatattatttttattt 26794923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 305 - 480
Target Start/End: Complemental strand, 1639186 - 1639013
Alignment:
Q  305 taaacgttagttacttgttagtgttaactcttagtactgatgtgttcnnnnnnnggatatagtgattcttttttgaatcgatatagtatagcactaacaa 404  Q
    |||||||||||||||||||||||||||||||||||||||||||||||       |||||||||| |||||||||| ||||||||| ||||||||||||||    
T  1639186 taaacgttagttacttgttagtgttaactcttagtactgatgtgttcttttta-ggatatagtgcttcttttttggatcgatataatatagcactaacaa 1639088  T
Q  405 gttccttttggatatagtgtagcattgatgtataacactgctggtgctctttttggtatatattgcgtatgtaatt 480  Q
    |||| ||||||||||| ||||||||||||||||| |||||  |||||||||||| |||||||||||||||||||||    
T  1639087 gttcattttggatataatgtagcattgatgtatatcactgacggtgctcttttt-gtatatattgcgtatgtaatt 1639013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 75 - 306
Target Start/End: Complemental strand, 32707952 - 32707710
Alignment:
Q  75 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac-----------ttttcgatacgtatccggagagta 163  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||           ||  ||||||||||||||||||||    
T  32707952 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagta 32707853  T
Q  164 tccaaatattaaattttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtgttttttatattattttgatt 263  Q
    ||||||||||||||||||       || || |||||||| ||||||||||||||| || ||||||||||||||||||||||| |||||||||||||||||    
T  32707852 tccaaatattaaattttatttttttaaaaaataattatctgatactttccgatacgtctcgatacgcacggatacttgtgttctttatattattttgatt 32707753  T
Q  264 tctgnnnnnnnnnngtgtaaaaaataagaataaaaacattata 306  Q
    ||||           |||||||||| |||||||||||||||||    
T  32707752 tctgttttttttttttgtaaaaaatcagaataaaaacattata 32707710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 76 - 306
Target Start/End: Original strand, 32624875 - 32625116
Alignment:
Q  76 tgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac-----------ttttcgatacgtatccggagagtat 164  Q
    ||||||||||||||| || ||||||||||||||||||||||||||| ||||| |||||||||||           ||  |||||||||| || |||||||    
T  32624875 tgtgaagccccgatatttcaaaatggatgacgtaccgtatcccctgtgtatcttgcatcgatacctgcccgatacttcccgatacgtattcgaagagtat 32624974  T
Q  165 ccaaatattaaattttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtgttttttatattattttgattt 264  Q
    |||||||||||||||||       || || ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  32624975 ccaaatattaaattttatttttttaaaaaataattatccgatactttccgatatatctcgatacgcacggatacttgtgttttttatattattttgattt 32625074  T
Q  265 ctgnnnnnnnnnngtgtaaaaaataagaataaaaacattata 306  Q
    |||          |||||||||||||||||||||||||||||    
T  32625075 ctgttttttttttgtgtaaaaaataagaataaaaacattata 32625116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 75 - 267
Target Start/End: Complemental strand, 39690884 - 39690680
Alignment:
Q  75 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatactt---------ttc--gatacgtatccggagagta 163  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |         |||  |||||||||||||||||||    
T  39690884 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcctgatacgtatccggagagta 39690785  T
Q  164 tccaaatattaaattttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtgtt-ttttatattattttgat 262  Q
    ||||||||||||||||||       || || |||||||||||||||||||||||||||||||||| ||| |||||||||||| |||||||||||||||||    
T  39690784 tccaaatattaaattttatttttttaaaaaataattatccgatactttccgatacatcccgatacacacagatacttgtgtttttttatattattttgat 39690685  T
Q  263 ttctg 267  Q
    |||||    
T  39690684 ttctg 39690680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 75 - 306
Target Start/End: Original strand, 12852116 - 12852341
Alignment:
Q  75 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatacttttcgatacgtatccggagagtatccaaatatta 174  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||   ||||||||||||||||||||||||||||||    
T  12852116 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacttcctgatacgtatccggagagtatccaaatatta 12852215  T
Q  175 aattttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtg-ttttttatattattttgatttctg-nnnnn 272  Q
    |||||||       || || |||||||||||||| | |        ||||||||||||||||||||||| ||||||||||||||||||||||||          
T  12852216 aattttatttttttaaaaaataattatccgatacatcc--------cccgatacgcacggatacttgtgtttttttatattattttgatttctgtttttt 12852307  T
Q  273 nnnnngtgtaaaaaataagaataaaaacattata 306  Q
         |||||||||||||||||||||||||||||    
T  12852308 tttttgtgtaaaaaataagaataaaaacattata 12852341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 78 - 267
Target Start/End: Complemental strand, 41392830 - 41392630
Alignment:
Q  78 tgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac-----------ttttcgatacgtatccggagagtatcc 166  Q
    ||||| || ||||||| |||||||||||||||||||||||||||||||||||||| ||||||           ||  ||||| |||||||| ||||||||    
T  41392830 tgaagtccagatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatatgtatccggggagtatcc 41392731  T
Q  167 aaatattaaattttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtgttttttatattattttgatttct 266  Q
    |||||||||||||||       || || |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41392730 aaatattaaattttattttaaaaaaaaataataatctgatactttccgatacatcccgatacgcacggatacttgtgttttttatattattttgatttct 41392631  T
Q  267 g 267  Q
    |    
T  41392630 g 41392630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 359 - 480
Target Start/End: Original strand, 10657219 - 10657341
Alignment:
Q  359 ggatatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatgtataacactgctggtgctctttt 457  Q
    ||||||| || |||||||||| |||||||||||||||||||||||| ||||| |||||||||||| ||||||||||||||||||||  ||||||||||||    
T  10657219 ggatataatgcttcttttttggatcgatatagtatagcactaacaatgttccgtttggatatagtatagcattgatgtataacactaatggtgctctttt 10657318  T
Q  458 tggtatatattgcgtatgtaatt 480  Q
    |||||||| ||||||||||||||    
T  10657319 tggtatattttgcgtatgtaatt 10657341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 305 - 480
Target Start/End: Complemental strand, 26794390 - 26794224
Alignment:
Q  305 taaacgttagttacttgttagtgttaactcttagtactgatgtgttcnnnnnnnggatatagtgattcttttttgaatcgatatagtatagcactaacaa 404  Q
    |||||||||||||||||||||||||||||||||||         |||       ||||||||||||||||||||| |||||| ||||||| |||||||||    
T  26794390 taaacgttagttacttgttagtgttaactcttagt---------ttctttttttggatatagtgattcttttttggatcgatttagtataacactaacaa 26794300  T
Q  405 gttccttttggatatagtgtagcattgatgtataacactgctggtgctctttttggtatatattgcgtatgtaatt 480  Q
    |||||||||||||||| |||||||||||||| ||   ||| || ||||||||||||||||||||||||||||||||    
T  26794299 gttccttttggatataatgtagcattgatgtttattcctgatgatgctctttttggtatatattgcgtatgtaatt 26794224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 305 - 436
Target Start/End: Original strand, 33830482 - 33830611
Alignment:
Q  305 taaacgttagttacttgttagtgttaactcttagtactgatgtgttcnnnnnnnggatatagtgattcttttttgaatcgatatagtatagcactaacaa 404  Q
    |||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||| ||||||| |||||||||||||| |||||||||    
T  33830482 taaacgttagttacttgttagtgttaactcttagtactgatgtgttctttttttggatatagtgatt-ttttttggatcgatatagtataacactaacaa 33830580  T
Q  405 gttccttttggatatagtgtagcattgatgta 436  Q
    |||||||||||||  | |||||||||||||||    
T  33830581 gttccttttggatcga-tgtagcattgatgta 33830611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 73 - 249
Target Start/End: Original strand, 33829748 - 33829931
Alignment:
Q  73 ggctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatc-----------gatacttttcgatacgtatccggagag 161  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |           |||||||  ||||||||||||||||||    
T  33829748 ggctctgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacatgcctgatacttcccgatacgtatccggagag 33829847  T
Q  162 tatccaaatattaaattttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtgtttttt 249  Q
    |||||||||||||||||||        ||    |||||||||||||||||| ||||||||| | ||||||||||||||||||||||||    
T  33829848 tatccaaatattaaatttttttttttaaa----taattatccgatactttctgatacatcctggtacgcacggatacttgtgtttttt 33829931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 75 - 181
Target Start/End: Complemental strand, 6243279 - 6243173
Alignment:
Q  75 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatacttttcgatacgtatccggagagtatccaaatatta 174  Q
    ||||||||| ||||||||| |||||||||||||||  |||||| |||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||    
T  6243279 ctgtgaagctccgatacttcaaaatggatgacgtattgtatcctctgcgtatcctgcaccgatactttccgatacgtatccggagagtatccgaatatta 6243180  T
Q  175 aatttta 181  Q
    |||||||    
T  6243179 aatttta 6243173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 359 - 480
Target Start/End: Complemental strand, 5985821 - 5985700
Alignment:
Q  359 ggatatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatgtataacactgctggtgctctttt 457  Q
    |||||||||| || |||||| | ||||||||||||||||||| ||| |||||||||||||| ||| ||||||||||||||||||||| || |||||||||    
T  5985821 ggatatagtgttttttttttta-tcgatatagtatagcactagcaatgttccttttggataaagtatagcattgatgtataacactgatgatgctctttt 5985723  T
Q  458 tggtatatattgcgtatgtaatt 480  Q
    |||||||| ||||||||||||||    
T  5985722 tggtatattttgcgtatgtaatt 5985700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 75 - 267
Target Start/End: Complemental strand, 1639903 - 1639711
Alignment:
Q  75 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac-----------ttttcgatacgtatccggagagta 163  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||           ||  ||||||||||||| ||||||    
T  1639903 ctgtgaagccccgatacttcaaaatggatgacgtactgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccgaagagta 1639804  T
Q  164 tccaaatattaaattttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtgttttttatattattttgatt 263  Q
    ||||||||||||||||||       || || |||||||||||||| |          |||||||||||||||||||||||||||||||||||||||||||    
T  1639803 tccaaatattaaattttatttttaaaaaaa-taattatccgatacgt----------cccgatacgcacggatacttgtgttttttatattattttgatt 1639715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 74 - 181
Target Start/End: Original strand, 9792315 - 9792433
Alignment:
Q  74 gctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcat-----------cgatacttttcgatacgtatccggagagt 162  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||           ||||||||  |||||||||||| ||||||    
T  9792315 gctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgtgtatcctgcatcgatacctgcccgatacttcccgatacgtatccagagagt 9792414  T
Q  163 atccaaatattaaatttta 181  Q
    |||||||||||||||||||    
T  9792415 atccaaatattaaatttta 9792433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 305 - 405
Target Start/End: Original strand, 12852831 - 12852931
Alignment:
Q  305 taaacgttagttacttgttagtgttaactcttagtactgatgtgttcnnnnnnnggatatagtgattcttttttgaatcgatatagtatagcactaacaa 404  Q
    |||||||||||||||||||||||||||||||||||||| |||||||        ||||||| ||||||||||||| ||||||||||||||||||||||||    
T  12852831 taaacgttagttacttgttagtgttaactcttagtacttatgtgttttttttttggatataatgattcttttttggatcgatatagtatagcactaacaa 12852930  T
Q  405 g 405  Q
    |    
T  12852931 g 12852931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 75 - 175
Target Start/End: Original strand, 10656817 - 10656928
Alignment:
Q  75 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgca-----------tcgatacttttcgatacgtatccggagagta 163  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||            |||||||| |||||||||||| ||||||||    
T  10656817 ctgtgaagccccgatactttaaaatggatgacgtatcgtatcccctgcgtatcctgcaccgatacctgcccgatacttctcgatacgtatcgggagagta 10656916  T
Q  164 tccaaatattaa 175  Q
    ||||||||||||    
T  10656917 tccaaatattaa 10656928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 74 - 181
Target Start/End: Complemental strand, 30777644 - 30777526
Alignment:
Q  74 gctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgca-----------tcgatacttttcgatacgtatccggagagt 162  Q
    |||||||||||||||||||| ||||||||||||||| |||||||| |||||||||||||            ||||||||  |||||||||||||||||||    
T  30777644 gctgtgaagccccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagt 30777545  T
Q  163 atccaaatattaaatttta 181  Q
    |||||||||||||||||||    
T  30777544 atccaaatattaaatttta 30777526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 418 - 480
Target Start/End: Original strand, 30918978 - 30919040
Alignment:
Q  418 atagtgtagcattgatgtataacactgctggtgctctttttggtatatattgcgtatgtaatt 480  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||    
T  30918978 atagtgtagcattgatgtataacactgatgatgctctttttggtatatattgcgtatgtaatt 30919040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 78 - 139
Target Start/End: Complemental strand, 30284725 - 30284664
Alignment:
Q  78 tgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac 139  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  30284725 tgaagctccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatac 30284664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 78 - 181
Target Start/End: Original strand, 7629070 - 7629173
Alignment:
Q  78 tgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatacttttcgatacgtatccggagagtatccaaatattaaat 177  Q
    |||||||| ||||| | ||||||||||||||| ||||||||||||||||| || |  |||||||  ||||||||||| ||||||||||  || |||||||    
T  7629070 tgaagccctgatacctcaaaatggatgacgtatcgtatcccctgcgtatcttgtactgatacttcccgatacgtatcaggagagtatctgaagattaaat 7629169  T
Q  178 ttta 181  Q
    ||||    
T  7629170 ttta 7629173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 76 - 139
Target Start/End: Original strand, 30918376 - 30918439
Alignment:
Q  76 tgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac 139  Q
    |||||||||||||||||| |||||||||||||||  ||||||||||||||||||||| ||||||    
T  30918376 tgtgaagccccgatacttcaaaatggatgacgtattgtatcccctgcgtatcctgcaccgatac 30918439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 362 - 422
Target Start/End: Complemental strand, 43357635 - 43357574
Alignment:
Q  362 tatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagt 422  Q
    ||||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  43357635 tatagtgcttcttttttgaatcgatatagtatagcactaacaatgtttcttttggatatagt 43357574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 359 - 434
Target Start/End: Original strand, 3701325 - 3701401
Alignment:
Q  359 ggatatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatg 434  Q
    ||||| |||| |||||||||| |||||||||||||| ||||||||| |||||||||||||||||| ||||| |||||    
T  3701325 ggatacagtgcttcttttttggatcgatatagtataacactaacaatgttccttttggatatagtatagcactgatg 3701401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 211 - 267
Target Start/End: Original strand, 7977375 - 7977431
Alignment:
Q  211 tccgatacatcccgatacgcacggatacttgtgttttttatattattttgatttctg 267  Q
    ||||||||||| ||||||||| |||||||| ||||||||||||||||||||||||||    
T  7977375 tccgatacatcacgatacgcatggatacttatgttttttatattattttgatttctg 7977431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 359 - 422
Target Start/End: Original strand, 22738098 - 22738162
Alignment:
Q  359 ggatatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagt 422  Q
    |||||||||| |||||||||| |||||||||||||| ||||||||| ||||||||||||||||||    
T  22738098 ggatatagtgcttcttttttggatcgatatagtataacactaacaatgttccttttggatatagt 22738162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 359 - 434
Target Start/End: Original strand, 26691878 - 26691954
Alignment:
Q  359 ggatatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatg 434  Q
    |||||||||| |||||||||| ||||||| |||||| ||||||||| |||||||||||||||||| || ||||||||    
T  26691878 ggatatagtgcttcttttttggatcgatagagtataacactaacaatgttccttttggatatagtataacattgatg 26691954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 75 - 139
Target Start/End: Original strand, 26716270 - 26716334
Alignment:
Q  75 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac 139  Q
    |||||||||| |||||||| ||||||||||||||| ||||||||||||||||||| || ||||||    
T  26716270 ctgtgaagcctcgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctacaccgatac 26716334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 359 - 434
Target Start/End: Original strand, 26961610 - 26961686
Alignment:
Q  359 ggatatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatg 434  Q
    |||||||||| |||||||||| ||||||| |||||| ||||||||| |||||||||||||||||| || ||||||||    
T  26961610 ggatatagtgcttcttttttggatcgatagagtataacactaacaatgttccttttggatatagtataacattgatg 26961686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 75 - 139
Target Start/End: Original strand, 26986010 - 26986074
Alignment:
Q  75 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac 139  Q
    |||||||||| |||||||| ||||||||||||||| ||||||||||||||||||| || ||||||    
T  26986010 ctgtgaagcctcgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctacaccgatac 26986074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 75 - 266
Target Start/End: Complemental strand, 32728830 - 32728638
Alignment:
Q  75 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac-----------ttttcgatacgtatccggagagta 163  Q
    ||||||||| ||||||||| ||||| ||||| |||  |||||||||||||||| |||||||||||           ||  ||||||||||||||||||||    
T  32728830 ctgtgaagctccgatacttcaaaattgatgatgtattgtatcccctgcgtatcttgcatcgatacctgcccgatacttcccgatacgtatccggagagta 32728731  T
Q  164 tccaaatattaaattttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtgttttttatattattttgatt 263  Q
    ||||||||||| ||||||       || || ||||||||| |||| |          |||||||||||| |||||||||||||||||||||||||| |||    
T  32728730 tccaaatattagattttattttttaaaaaaataattatccaatacgt----------cccgatacgcactgatacttgtgttttttatattatttttatt 32728641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 76 - 139
Target Start/End: Original strand, 1795390 - 1795453
Alignment:
Q  76 tgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac 139  Q
    |||||||||||||||||| ||||||| ||||||| |||||||||| ||||||||||| ||||||    
T  1795390 tgtgaagccccgatacttcaaaatggttgacgtatcgtatcccctccgtatcctgcaccgatac 1795453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 362 - 422
Target Start/End: Original strand, 1795635 - 1795696
Alignment:
Q  362 tatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagt 422  Q
    ||||||| |||||||||| |||||||||||||||||||||||| ||| ||||||||||||||    
T  1795635 tatagtgcttcttttttggatcgatatagtatagcactaacaatgtttcttttggatatagt 1795696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 370 - 434
Target Start/End: Original strand, 21251734 - 21251799
Alignment:
Q  370 ttcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatg 434  Q
    |||||||||| ||||||||||||||||| |||||| |||||||||||||||||| ||||| |||||    
T  21251734 ttcttttttggatcgatatagtatagcattaacaatgttccttttggatatagtatagcactgatg 21251799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 362 - 422
Target Start/End: Original strand, 26716515 - 26716576
Alignment:
Q  362 tatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagt 422  Q
    ||||||| |||||||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  26716515 tatagtgcttcttttttggatcgatatagtatagcactaacaatgttcattttggatatagt 26716576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 362 - 422
Target Start/End: Original strand, 26986255 - 26986316
Alignment:
Q  362 tatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagt 422  Q
    ||||||| |||||||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  26986255 tatagtgcttcttttttggatcgatatagtatagcactaacaatgttcattttggatatagt 26986316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 359 - 434
Target Start/End: Complemental strand, 17138111 - 17138035
Alignment:
Q  359 ggatatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatg 434  Q
    |||||||||| |||||||||| || |||||| |||||||||||||| |||||||||| ||||| | |||||||||||    
T  17138111 ggatatagtgcttcttttttggattgatataatatagcactaacaatgttccttttgcatataatatagcattgatg 17138035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 362 - 428
Target Start/End: Original strand, 25749848 - 25749915
Alignment:
Q  362 tatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagtgtagca 428  Q
    ||||||| |||||||||| |||||| || |||||||||||||| |||| |||||||||||||||||||    
T  25749848 tatagtgcttcttttttggatcgatgtaatatagcactaacaatgttcattttggatatagtgtagca 25749915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 80 - 139
Target Start/End: Original strand, 26691618 - 26691677
Alignment:
Q  80 aagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac 139  Q
    |||||||||||||| ||||| ||||||||| |||||||||||||||| ||||| ||||||    
T  26691618 aagccccgatacttcaaaatagatgacgtatcgtatcccctgcgtattctgcaccgatac 26691677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 80 - 139
Target Start/End: Original strand, 26961350 - 26961409
Alignment:
Q  80 aagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac 139  Q
    |||||||||||||| ||||| ||||||||| |||||||||||||||| ||||| ||||||    
T  26961350 aagccccgatacttcaaaatagatgacgtatcgtatcccctgcgtattctgcaccgatac 26961409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 362 - 428
Target Start/End: Original strand, 27938401 - 27938468
Alignment:
Q  362 tatagtgattcttttttgaatcgatatagtatagcactaaca-agttccttttggatatagtgtagca 428  Q
    ||||||| |||||||||| ||||||||||| |||||||||||  |||||||||||||||||| |||||    
T  27938401 tatagtgcttcttttttggatcgatatagtgtagcactaacagtgttccttttggatatagtatagca 27938468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 80 - 181
Target Start/End: Original strand, 11906220 - 11906332
Alignment:
Q  80 aagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgata-----------cttttcgatacgtatccggagagtatccaa 168  Q
    ||||| |||||||| |||||||||||||||  |||| |||||||||||||||| |||||           |||  ||||||||||||||||||||||| |    
T  11906220 aagcctcgatacttcaaaatggatgacgtattgtattccctgcgtatcctgcaccgatatctgtccgatacttcccgatacgtatccggagagtatccga 11906319  T
Q  169 atattaaatttta 181  Q
    |||||||||||||    
T  11906320 atattaaatttta 11906332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 434 - 480
Target Start/End: Original strand, 11907615 - 11907661
Alignment:
Q  434 gtataacactgctggtgctctttttggtatatattgcgtatgtaatt 480  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||    
T  11907615 gtataacactgatggtgctctttttggtatatattgtgtatgtaatt 11907661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 359 - 428
Target Start/End: Original strand, 27085610 - 27085680
Alignment:
Q  359 ggatatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagtgtagca 428  Q
    |||||||||| |||||||||| ||||||||| |||||||||||||| |||| ||||| ||||||| |||||    
T  27085610 ggatatagtgcttcttttttggatcgatataatatagcactaacaatgttcattttgaatatagtatagca 27085680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 75 - 132
Target Start/End: Original strand, 5721985 - 5722041
Alignment:
Q  75 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgca 132  Q
    ||||||||||| |||| |||||||| ||||||||| ||||||||||||||||||||||    
T  5721985 ctgtgaagccc-gatattttaaaattgatgacgtatcgtatcccctgcgtatcctgca 5722041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 362 - 422
Target Start/End: Original strand, 14836574 - 14836635
Alignment:
Q  362 tatagtgattcttttttgaatcgatatagtatagcactaac-aagttccttttggatatagt 422  Q
    ||||||| |||||||||| |||||||||||||| ||||||| ||||| ||||||||||||||    
T  14836574 tatagtgcttcttttttggatcgatatagtatatcactaacaaagtttcttttggatatagt 14836635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 359 - 434
Target Start/End: Original strand, 5722238 - 5722314
Alignment:
Q  359 ggatatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatg 434  Q
    |||||||||| ||||||||||||||||||||| ||| ||||||||| |||  ||||||||||| | ||||| |||||    
T  5722238 ggatatagtgcttcttttttgaatcgatataggataacactaacaatgtttattttggatataatatagcactgatg 5722314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 370 - 428
Target Start/End: Original strand, 7629296 - 7629355
Alignment:
Q  370 ttcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagtgtagca 428  Q
    |||||||||| |||||||||||||||||||||||| ||  |||||||||||||| |||||    
T  7629296 ttcttttttggatcgatatagtatagcactaacaatgtatcttttggatatagtatagca 7629355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 69 - 116
Target Start/End: Original strand, 11694210 - 11694257
Alignment:
Q  69 tattggctgtgaagccccgatactttaaaatggatgacgtaccgtatc 116  Q
    |||||||||||||  ||||||||||||||||||||||||||| |||||    
T  11694210 tattggctgtgaatgcccgatactttaaaatggatgacgtactgtatc 11694257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 87 - 138
Target Start/End: Original strand, 14836390 - 14836441
Alignment:
Q  87 gatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgata 138  Q
    ||||||| ||||||| |||||||  |||||||||||||||||||||||||||    
T  14836390 gatacttcaaaatggttgacgtattgtatcccctgcgtatcctgcatcgata 14836441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 79 - 138
Target Start/End: Complemental strand, 17138370 - 17138312
Alignment:
Q  79 gaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgata 138  Q
    ||||||||||||||| ||||| |||||||||  ||||||||||||||||||||| |||||    
T  17138370 gaagccccgatacttcaaaatagatgacgtat-gtatcccctgcgtatcctgcaccgata 17138312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 225 - 267
Target Start/End: Complemental strand, 5986048 - 5986006
Alignment:
Q  225 atacgcacggatacttgtgttttttatattattttgatttctg 267  Q
    ||||| |||||| ||||||||||||||||||||||||||||||    
T  5986048 atacgtacggatgcttgtgttttttatattattttgatttctg 5986006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 83 - 181
Target Start/End: Original strand, 7977254 - 7977355
Alignment:
Q  83 ccccgatactttaaaatggatgacgtaccgt--atcccctgcgtatcctgcatcgatacttttc-gatacgtatccggagagtatccaaatattaaattt 179  Q
    |||||||| ||||||||| || |||||||||  || |  || |||||||||| ||||||||  | ||||||||| ||||||||||| |||||||||||||    
T  7977254 ccccgatagtttaaaatgcataacgtaccgtgtattcattgagtatcctgcaccgatacttgcccgatacgtattcggagagtatctaaatattaaattt 7977353  T
Q  180 ta 181  Q
    ||    
T  7977354 ta 7977355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 76 - 177
Target Start/End: Original strand, 22774552 - 22774664
Alignment:
Q  76 tgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgata-----------cttttcgatacgtatccggagagtat 164  Q
    ||||||| | |||||||||||||||| || |||| |||||||||||| ||||||||| |||||           |||| |||||||||||  ||||||||    
T  22774552 tgtgaagtctcgatactttaaaatggttggcgtatcgtatcccctgcatatcctgcaccgatatctgcccgatactttccgatacgtatcgagagagtat 22774651  T
Q  165 ccaaatattaaat 177  Q
    |||||||||||||    
T  22774652 ccaaatattaaat 22774664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 78 - 139
Target Start/End: Complemental strand, 3934906 - 3934845
Alignment:
Q  78 tgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac 139  Q
    ||||||| | ||||||||||||||||||||||   |||||||||||||||| ||| ||||||    
T  3934906 tgaagcctccatactttaaaatggatgacgtattatatcccctgcgtatcccgcaccgatac 3934845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 222 - 267
Target Start/End: Original strand, 30918513 - 30918558
Alignment:
Q  222 ccgatacgcacggatacttgtgttttttatattattttgatttctg 267  Q
    ||||||||||||||||||| | |||||||||||||||| |||||||    
T  30918513 ccgatacgcacggatacttatattttttatattatttttatttctg 30918558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 135 - 179
Target Start/End: Original strand, 21251533 - 21251577
Alignment:
Q  135 gatacttttcgatacgtatccggagagtatccaaatattaaattt 179  Q
    |||||||| ||||||||||| ||||||||||| ||||||||||||    
T  21251533 gatactttccgatacgtatcaggagagtatccgaatattaaattt 21251577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 373 - 428
Target Start/End: Complemental strand, 30284450 - 30284394
Alignment:
Q  373 ttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagtgtagca 428  Q
    ||||||| |||||||||||||| ||||||||| |||| ||||||||||||| |||||    
T  30284450 ttttttggatcgatatagtataacactaacaatgttcattttggatatagtatagca 30284394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 134 - 181
Target Start/End: Complemental strand, 5986119 - 5986072
Alignment:
Q  134 cgatacttttcgatacgtatccggagagtatccaaatattaaatttta 181  Q
    |||||||||  |||||||||  ||||||||||||||||||||||||||    
T  5986119 cgatactttctgatacgtattgggagagtatccaaatattaaatttta 5986072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 76 - 139
Target Start/End: Complemental strand, 35746371 - 35746308
Alignment:
Q  76 tgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac 139  Q
    |||||||| ||||||||| ||||| |||||||||  ||||| ||| |||||| |||||||||||    
T  35746371 tgtgaagctccgatacttcaaaatagatgacgtattgtatctcctacgtatcatgcatcgatac 35746308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 76 - 138
Target Start/End: Complemental strand, 5612562 - 5612500
Alignment:
Q  76 tgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgata 138  Q
    |||||||||| ||||||| ||||||||||||||| ||||| | ||| | ||||||||| ||||    
T  5612562 tgtgaagcccagatacttcaaaatggatgacgtatcgtattctctgtgcatcctgcattgata 5612500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 222 - 267
Target Start/End: Complemental strand, 6243100 - 6243054
Alignment:
Q  222 ccgatacgcacggatacttgtg-ttttttatattattttgatttctg 267  Q
    ||||||||||||||||| |||| |||||||||||||||| |||||||    
T  6243100 ccgatacgcacggatacgtgtgtttttttatattattttaatttctg 6243054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 434 - 480
Target Start/End: Original strand, 15066515 - 15066561
Alignment:
Q  434 gtataacactgctggtgctctttttggtatatattgcgtatgtaatt 480  Q
    ||||| ||||| ||||||||||||||| |||||||| ||||||||||    
T  15066515 gtatagcactgatggtgctctttttgggatatattgtgtatgtaatt 15066561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 434 - 480
Target Start/End: Complemental strand, 30777204 - 30777158
Alignment:
Q  434 gtataacactgctggtgctctttttggtatatattgcgtatgtaatt 480  Q
    ||||| ||||| || ||||||||||||||||||||| ||||||||||    
T  30777204 gtatatcactgatgatgctctttttggtatatattgtgtatgtaatt 30777158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 434 - 480
Target Start/End: Original strand, 34032674 - 34032720
Alignment:
Q  434 gtataacactgctggtgctctttttggtatatattgcgtatgtaatt 480  Q
    ||||| ||||| ||||||||||||||| |||||||| ||||||||||    
T  34032674 gtatagcactgatggtgctctttttgggatatattgtgtatgtaatt 34032720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 359 - 404
Target Start/End: Complemental strand, 5612298 - 5612253
Alignment:
Q  359 ggatatagtgattcttttttgaatcgatatagtatagcactaacaa 404  Q
    |||||||||| |||||||||  || |||||||||||||||||||||    
T  5612298 ggatatagtgcttctttttttgattgatatagtatagcactaacaa 5612253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 79 - 132
Target Start/End: Complemental strand, 42366220 - 42366167
Alignment:
Q  79 gaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgca 132  Q
    ||||| || |||||| ||||| ||||| |||| |||||||||||||||||||||    
T  42366220 gaagctccaatacttcaaaatagatgatgtactgtatcccctgcgtatcctgca 42366167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 381 - 420
Target Start/End: Complemental strand, 9729471 - 9729431
Alignment:
Q  381 atcgatatagtatagcactaacaa-gttccttttggatata 420  Q
    ||||||||||||||||| |||||| ||||||||||||||||    
T  9729471 atcgatatagtatagcattaacaatgttccttttggatata 9729431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 361 - 401
Target Start/End: Complemental strand, 18001821 - 18001781
Alignment:
Q  361 atatagtgattcttttttgaatcgatatagtatagcactaa 401  Q
    |||||||| |||||||||| ||||||| |||||||||||||    
T  18001821 atatagtgcttcttttttggatcgataaagtatagcactaa 18001781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 87 - 139
Target Start/End: Original strand, 41233388 - 41233440
Alignment:
Q  87 gatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac 139  Q
    ||||||| ||||||||||||||| |||||  ||| ||||||||||| ||||||    
T  41233388 gatacttcaaaatggatgacgtatcgtatttcctacgtatcctgcaacgatac 41233440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 129; Significance: 1e-66; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 303 - 480
Target Start/End: Complemental strand, 44005 - 43828
Alignment:
Q  303 tataaacgttagttacttgttagtgttaactcttagtactgatgtgttcnnnnnnnggatatagtgattcttttttgaatcgatatagtatagcactaac 402  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||       ||||||||||||||||||| | ||||||||||||||||||||||    
T  44005 tataaacgttagttacttgttagtgttaactcttagtattgatgtgttctttttttggatatagtgattctttttcggatcgatatagtatagcactaac 43906  T
Q  403 aagttccttttggatatagtgtagcattgatgtataacactgctggtgctctttttggtatatattgcgtatgtaatt 480  Q
    |||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||    
T  43905 aagttccttttggatacagtgtagcattgatgtatagcactgatggtgctctttttgatatatattgcgtatgtaatt 43828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 74 - 267
Target Start/End: Complemental strand, 44712 - 44539
Alignment:
Q  74 gctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatacttttcgatacgtatccggagagtatccaaatatt 173  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||           ||||||||||||||||||||||||||||||    
T  44712 gctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgca----------ccgatacgtatccggagagtatccaaatatt 44623  T
Q  174 aaattttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtgttttttatattattttgatttctg 267  Q
    |||||||        || || ||||||          |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  44622 aaatttttttcttttaaaaaataatta----------tccgatacatcccgatacacacggatacttgtgttttttatattattttgatttctg 44539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 278 - 306
Target Start/End: Complemental strand, 44521 - 44493
Alignment:
Q  278 gtgtaaaaaataagaataaaaacattata 306  Q
    |||||||||||||||||||||||||||||    
T  44521 gtgtaaaaaataagaataaaaacattata 44493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0640 (Bit Score: 104; Significance: 1e-51; HSPs: 1)
Name: scaffold0640
Description:

Target: scaffold0640; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 72 - 267
Target Start/End: Complemental strand, 8216 - 8010
Alignment:
Q  72 tggctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac-----------ttttcgatacgtatccggaga 160  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||           ||  |||||||||||||||||    
T  8216 tggctgtgaagccccgatacttcaaaatggatgatgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggaga 8117  T
Q  161 gtatccaaatattaaattttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtgttttttatattattttg 260  Q
    |||||||||||||||||||||       || || |||||||| ||||||||||||||| || ||||||||||||||||||||||| ||||||||||||||    
T  8116 gtatccaaatattaaattttatttttaaaaaaaataattatctgatactttccgatacgtctcgatacgcacggatacttgtgttctttatattattttg 8017  T
Q  261 atttctg 267  Q
    |||||||    
T  8016 atttctg 8010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 96; Significance: 7e-47; HSPs: 2)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 75 - 267
Target Start/End: Complemental strand, 30565 - 30362
Alignment:
Q  75 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatactt---------ttc--gatacgtatccggagagta 163  Q
    ||||||||||||||||||| ||||||||| |||||||||||  |||||||||||| || |||||| |         |||  |||||||||||||||||||    
T  30565 ctgtgaagccccgatacttcaaaatggataacgtaccgtatttcctgcgtatcctacaccgatacctgcccgatacttcctgatacgtatccggagagta 30466  T
Q  164 tccaaatattaaattttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtgttttttatattattttgatt 263  Q
    ||||||||||||||||||       || || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||    
T  30465 tccaaatattaaattttattttaaaaaaaaataattatccgatactttccgatacatcccgatacgctcggatacttgtgttttttatattatttttatt 30366  T
Q  264 tctg 267  Q
    ||||    
T  30365 tctg 30362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 418 - 480
Target Start/End: Complemental strand, 29929 - 29867
Alignment:
Q  418 atagtgtagcattgatgtataacactgctggtgctctttttggtatatattgcgtatgtaatt 480  Q
    |||||||||||||||||||||| |||| || ||||||||||||||||||||||||||||||||    
T  29929 atagtgtagcattgatgtataaaactgatgatgctctttttggtatatattgcgtatgtaatt 29867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 88; Significance: 4e-42; HSPs: 2)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 78 - 265
Target Start/End: Complemental strand, 42183 - 42006
Alignment:
Q  78 tgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatacttttcgatacgtatccggagagtatccaaatattaaat 177  Q
    |||||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||  |||||||||||  |||||||||||||||||||||    
T  42183 tgaagccccgatacttcaaaatggatgacgtactgtatcccctgcgtatcctgcaccgatacttcccgatacgtatctagagagtatccaaatattaaat 42084  T
Q  178 tttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtgttttttatattattttgatttc 265  Q
    ||||       || || |||||||||||||| ||          || |||||||||||||||||||||||||||||||||||||||||    
T  42083 tttattttttaaaaaaataattatccgatacgtt----------cccatacgcacggatacttgtgttttttatattattttgatttc 42006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112; HSP #2
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 305 - 459
Target Start/End: Complemental strand, 41481 - 41330
Alignment:
Q  305 taaacgttagttacttgttagtgttaactcttagtactgatgtgttcnnnnnnnggatatagtgattcttttttgaatcgatatagtatagcactaacaa 404  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||       |||||||||| |||||||||| |||||||||||||| |||||||||    
T  41481 taaacgttagttacctgttagtgttaactcttagtactgatgtgttctttttt-ggatatagtgcttcttttttggatcgatatagtataacactaacaa 41383  T
Q  405 gttccttttggatatagtgtagcattgatgtataacactgctggtgctctttttg 459  Q
    |||||||||||||||| ||||||   |||||||| || || ||||| ||||||||    
T  41382 gttccttttggatataatgtagc--cgatgtatagcattgatggtgatctttttg 41330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177 (Bit Score: 84; Significance: 1e-39; HSPs: 2)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 74 - 181
Target Start/End: Complemental strand, 25652 - 25545
Alignment:
Q  74 gctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatacttttcgatacgtatccggagagtatccaaatatt 173  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||||||||| ||||| ||||||||  ||||||||||||||||||||||||||||||    
T  25652 gctgtgaagccccgatacttcaaaatggatgacgcaccgtatcccctgcgtattctgcaccgatacttcccgatacgtatccggagagtatccaaatatt 25553  T
Q  174 aaatttta 181  Q
    ||||||||    
T  25552 aaatttta 25545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 223 - 267
Target Start/End: Complemental strand, 25513 - 25469
Alignment:
Q  223 cgatacgcacggatacttgtgttttttatattattttgatttctg 267  Q
    ||||||| |||||||||||| || |||| ||||||||||||||||    
T  25513 cgatacgaacggatacttgtattctttaaattattttgatttctg 25469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 83; Significance: 4e-39; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 74 - 267
Target Start/End: Complemental strand, 27903 - 27719
Alignment:
Q  74 gctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgata-cttttcgatacgtatccggagagtatccaaatat 172  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| ||||| || | ||||||||||||| |||||||||||||||    
T  27903 gctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcatatcctgcaccgatacctgtccgatacgtatccgcagagtatccaaatat 27804  T
Q  173 taaattttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtgttttttatattattttgatttctg 267  Q
    |||||||||       || || ||||||          |||||||  ||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  27803 taaattttatttttttaaaaaataatta----------tccgatatgtcctgatacgcacggatacttatgttttttatattattttgatttctg 27719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 305 - 397
Target Start/End: Complemental strand, 27183 - 27092
Alignment:
Q  305 taaacgttagttacttgttagtgttaactcttagtactgatgtgttcnnnnnnnggatatagtgattcttttttgaatcgatatagtatagca 397  Q
    |||||||||||||||||||||||||||||||||||||||||||||||       |||||| ||| |||||||||| |||||||||||||||||    
T  27183 taaacgttagttacttgttagtgttaactcttagtactgatgtgttc-ttttttggatatggtgcttcttttttggatcgatatagtatagca 27092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 74 - 266
Target Start/End: Original strand, 5508 - 5703
Alignment:
Q  74 gctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgca-----------tcgatacttttcgatacgtatccggagagt 162  Q
    ||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||            ||||||||  ||||||||||| |||||||    
T  5508 gctgtaaagccccgatacttcaaaatggacgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatcgggagagt 5607  T
Q  163 atccaaatattaaattttannnnnnnaagaactaattatccgatactttccgatacatcccgatacgcacggatacttgtg--ttttttatattattttg 260  Q
    |||||||||||||||||||       |  || ||||| |||||||||||          ||||||||||||||||||||||  |||||||||||||||||    
T  5608 atccaaatattaaattttattttttaagaaaataattttccgatacttt----------ccgatacgcacggatacttgtgttttttttatattattttg 5697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 359 - 463
Target Start/End: Original strand, 5905 - 6008
Alignment:
Q  359 ggatatagtgattcttttttgaatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatgtataacactgctggtgctctttt 457  Q
    |||||||||| |||||||||  || ||||||||||| || |||||| ||||||||| |||||||| |||||||||  |||||||| | ||||||||||||    
T  5905 ggatatagtgcttctttttttgattgatatagtataacattaacaatgttcctttttgatatagtatagcattga--tataacaccgatggtgctctttt 6002  T
Q  458 tggtat 463  Q
    ||||||    
T  6003 tggtat 6008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0406 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0406
Description:

Target: scaffold0406; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 75 - 180
Target Start/End: Original strand, 13863 - 13969
Alignment:
Q  75 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgata-cttttcgatacgtatccggagagtatccaaatatt 173  Q
    |||||||| |||||||||| |||||||||||||||| |||||  ||||||||||||||  | || ||   ||||||||||||||||||||||||||||||    
T  13863 ctgtgaagtcccgatacttcaaaatggatgacgtactgtatcatctgcgtatcctgcactgttacctacccgatacgtatccggagagtatccaaatatt 13962  T
Q  174 aaatttt 180  Q
    |||||||    
T  13963 aaatttt 13969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0406; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 222 - 267
Target Start/End: Original strand, 13997 - 14042
Alignment:
Q  222 ccgatacgcacggatacttgtgttttttatattattttgatttctg 267  Q
    |||||||||||| |||||||| ||| ||||||||||||||||||||    
T  13997 ccgatacgcacgtatacttgtctttattatattattttgatttctg 14042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 76 - 141
Target Start/End: Original strand, 10598 - 10663
Alignment:
Q  76 tgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatactt 141  Q
    |||||||||| ||||||||||||||||||| ||||| ||||||||||||||| |||| ||||||||    
T  10598 tgtgaagcccagatactttaaaatggatgatgtaccatatcccctgcgtatcatgcaccgatactt 10663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0285 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 80 - 139
Target Start/End: Original strand, 13252 - 13311
Alignment:
Q  80 aagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcatcgatac 139  Q
    |||| ||||||||| ||||||||||||||| |||||| ||||||||||||||| ||||||    
T  13252 aagctccgatacttcaaaatggatgacgtatcgtatctcctgcgtatcctgcaccgatac 13311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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