View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8546_high_4 (Length: 341)
Name: NF8546_high_4
Description: NF8546
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8546_high_4 |
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Alignment Details
Target: chr6 (Bit Score: 274; Significance: 1e-153; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 2 - 323
Target Start/End: Original strand, 6971762 - 6972083
Alignment:
| Q |
2 |
ccaacgtcaccttgtttcccctgcattcatgggagaaaaacttaaggtattgaaaaatcgaggaagatgtattcggtgcaattaggatatccctgcactc |
101 |
Q |
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| T |
6971762 |
ccaacgtcacattgtttcccctgcattcatgggagaaaaacttaaggtattgaaaaatcgaggaaaacgtattcggtgcaattggggtatccctacactc |
6971861 |
T |
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| Q |
102 |
acacagtcatgtattgccgattgttagatttacatcaaacatttcaaaaatacgtagattttattttattttcgaaaatttaatataccaagtttaaaat |
201 |
Q |
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| T |
6971862 |
acacagtcatgtattgccgattgttagatttacatcaaacatttcaaaaatacgtagattttattttattttcgaaaatttgatataccaagtttaaaat |
6971961 |
T |
|
| Q |
202 |
tataattgttcaatattgatccaacattcattgatacagggtgactgtgtgaattcaggatatcccaaccgcaaggaatcatgatacaaaaattgagact |
301 |
Q |
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| T |
6971962 |
taaaattgttacatattgatctaacattcattgatacagggtgactgtgtgaattcaggatatcccaaccacaaggaatcatgatacaaaaattgagact |
6972061 |
T |
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| Q |
302 |
aattaattagtgacacgctaat |
323 |
Q |
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|||||||||||||||||||||| |
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| T |
6972062 |
aattaattagtgacacgctaat |
6972083 |
T |
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