View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8547_low_10 (Length: 239)
Name: NF8547_low_10
Description: NF8547
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8547_low_10 |
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Alignment Details
Target: chr1 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 14 - 222
Target Start/End: Original strand, 35783010 - 35783218
Alignment:
| Q |
14 |
cagagaggtctagaaatgctagagacataatgttgccaagttgagacggaatttttgtagtgaatttgtttcggtataagtaaattgtagtaagattctt |
113 |
Q |
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| T |
35783010 |
cagagaggtctagaaatgctagtgacataatgttgccaagttgaggcggaattttcgcagtgaatttgtttcggtataagtaaattgtagtaagattctt |
35783109 |
T |
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| Q |
114 |
gagcttacctaattcgggtggaattcgtccactgagagtcccaactgccaaatcaagatattgaagatttgtcatgttgccaaattcagcaggaatctca |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35783110 |
gagcttacctaattcgggtggaattcgtccactgagagtcccaactgccaaatcaagatattgaagatttgtcatgttgccaaattcagcaggaatctca |
35783209 |
T |
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| Q |
214 |
ccttcaaat |
222 |
Q |
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||||||||| |
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| T |
35783210 |
ccttcaaat |
35783218 |
T |
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