View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8548A_low_123 (Length: 289)
Name: NF8548A_low_123
Description: NF8548A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8548A_low_123 |
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Alignment Details
Target: chr7 (Bit Score: 169; Significance: 1e-90; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 44999165 - 44999350
Alignment:
| Q |
1 |
atgggcgcaacaagcctacatacatcaacataaacaagtttatgaattataatagaacacaatcatatatagaaggaaggaaaaaataaataaataaaga |
100 |
Q |
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| T |
44999165 |
atgggcgcaacaagcctacatacatcaacataaacaagtttatgaattataatagaacacaatcatatatagaaggaaggaaaaaat----aaataaata |
44999260 |
T |
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| Q |
101 |
aatgtgagaacgttatatagaaatgggaacctccattgccacaatccactgaggacaatttgatccataaactccaattcgtgagcccta |
190 |
Q |
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| T |
44999261 |
aatgtgagaacgttatatagaaatgggaacctccattgccacaatccactgaggacaatttgatccataaactccaattcgtgagcccta |
44999350 |
T |
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