View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8548A_low_154 (Length: 266)

Name: NF8548A_low_154
Description: NF8548A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8548A_low_154
NF8548A_low_154
[»] chr7 (26 HSPs)
chr7 (105-266)||(10431388-10431549)
chr7 (105-266)||(26556512-26556673)
chr7 (105-266)||(4542076-4542237)
chr7 (105-266)||(2442114-2442275)
chr7 (105-266)||(8276014-8276175)
chr7 (105-212)||(16164891-16164998)
chr7 (105-212)||(48644618-48644725)
chr7 (3-99)||(16529610-16529706)
chr7 (3-99)||(16762324-16762420)
chr7 (3-99)||(16763513-16763609)
chr7 (105-212)||(6602623-6602730)
chr7 (105-184)||(48645840-48645919)
chr7 (105-194)||(45288047-45288136)
chr7 (105-194)||(45291383-45291472)
chr7 (3-99)||(18595805-18595900)
chr7 (3-99)||(18615784-18615879)
chr7 (105-213)||(20081530-20081638)
chr7 (105-195)||(17729975-17730065)
chr7 (105-194)||(9865551-9865640)
chr7 (4-99)||(13671441-13671534)
chr7 (3-99)||(13655579-13655675)
chr7 (3-99)||(14146719-14146815)
chr7 (3-55)||(11957343-11957395)
chr7 (3-55)||(15063720-15063772)
chr7 (3-55)||(15459755-15459807)
chr7 (3-55)||(15922191-15922243)
[»] chr5 (26 HSPs)
chr5 (105-266)||(28442018-28442179)
chr5 (105-266)||(42061488-42061649)
chr5 (105-266)||(31862874-31863035)
chr5 (105-231)||(14376706-14376832)
chr5 (105-266)||(43490795-43490956)
chr5 (98-266)||(37214761-37214929)
chr5 (125-266)||(32837105-32837246)
chr5 (105-266)||(22937892-22938053)
chr5 (3-99)||(25118690-25118786)
chr5 (3-99)||(25177781-25177877)
chr5 (105-212)||(14016927-14017034)
chr5 (3-99)||(20440709-20440804)
chr5 (105-212)||(17747619-17747726)
chr5 (134-212)||(7624288-7624366)
chr5 (105-194)||(21336650-21336740)
chr5 (105-194)||(21827949-21828039)
chr5 (3-99)||(30765649-30765744)
chr5 (105-195)||(28788309-28788399)
chr5 (3-99)||(22319958-22320054)
chr5 (215-266)||(21336558-21336609)
chr5 (105-194)||(39191333-39191422)
chr5 (105-167)||(7270243-7270305)
chr5 (215-266)||(21827857-21827908)
chr5 (105-194)||(18031712-18031801)
chr5 (221-266)||(39191449-39191494)
chr5 (3-59)||(24965799-24965854)
[»] chr2 (34 HSPs)
chr2 (105-266)||(36809272-36809433)
chr2 (105-266)||(26358674-26358835)
chr2 (105-266)||(25869837-25869998)
chr2 (105-266)||(25873205-25873366)
chr2 (108-266)||(38006123-38006281)
chr2 (105-266)||(30275528-30275689)
chr2 (105-266)||(25821754-25821920)
chr2 (105-231)||(15466172-15466298)
chr2 (3-102)||(22291815-22291914)
chr2 (105-231)||(29439599-29439723)
chr2 (105-265)||(16788391-16788550)
chr2 (105-266)||(25139877-25140038)
chr2 (105-212)||(45456302-45456409)
chr2 (106-212)||(36985626-36985732)
chr2 (105-212)||(45453053-45453160)
chr2 (3-99)||(22869334-22869430)
chr2 (3-99)||(20302669-20302764)
chr2 (3-99)||(23638849-23638945)
chr2 (105-212)||(38014638-38014745)
chr2 (3-99)||(23161921-23162016)
chr2 (3-99)||(23573178-23573273)
chr2 (105-212)||(31430529-31430636)
chr2 (105-194)||(10599953-10600042)
chr2 (11-93)||(24797830-24797912)
chr2 (3-99)||(115105-115200)
chr2 (3-99)||(27629080-27629175)
chr2 (148-212)||(31428340-31428404)
chr2 (3-99)||(16773265-16773359)
chr2 (103-194)||(13136762-13136853)
chr2 (105-194)||(3874484-3874573)
chr2 (105-178)||(5665832-5665905)
chr2 (105-179)||(43722906-43722980)
chr2 (105-179)||(5104955-5105027)
chr2 (3-55)||(24822625-24822677)
[»] chr8 (23 HSPs)
chr8 (105-266)||(33878075-33878236)
chr8 (105-261)||(18722151-18722308)
chr8 (107-266)||(25595521-25595681)
chr8 (105-260)||(10663013-10663168)
chr8 (109-266)||(43682634-43682792)
chr8 (107-266)||(25592336-25592496)
chr8 (6-102)||(21824981-21825077)
chr8 (7-99)||(22036038-22036130)
chr8 (105-185)||(23612571-23612651)
chr8 (100-266)||(14420861-14421027)
chr8 (124-266)||(45156755-45156897)
chr8 (3-99)||(19904104-19904200)
chr8 (105-212)||(14589707-14589814)
chr8 (125-266)||(5540832-5540973)
chr8 (105-212)||(22174782-22174889)
chr8 (149-266)||(25228060-25228175)
chr8 (100-212)||(18826725-18826837)
chr8 (140-213)||(38249248-38249321)
chr8 (105-166)||(19792928-19792990)
chr8 (116-194)||(12582231-12582309)
chr8 (3-99)||(18402876-18402972)
chr8 (3-55)||(29329830-29329882)
chr8 (105-179)||(30640507-30640583)
[»] chr4 (46 HSPs)
chr4 (105-266)||(9716953-9717114)
chr4 (105-266)||(15431166-15431327)
chr4 (105-266)||(15437780-15437941)
chr4 (105-266)||(18910606-18910767)
chr4 (105-252)||(5669630-5669777)
chr4 (105-252)||(33410813-33410960)
chr4 (105-266)||(3798633-3798794)
chr4 (113-266)||(19861124-19861277)
chr4 (105-266)||(5721808-5721969)
chr4 (105-266)||(19865480-19865641)
chr4 (105-231)||(37104113-37104239)
chr4 (105-266)||(12237356-12237517)
chr4 (105-211)||(56198031-56198137)
chr4 (105-212)||(47114778-47114885)
chr4 (105-212)||(56194724-56194831)
chr4 (140-266)||(53093758-53093884)
chr4 (153-266)||(40617649-40617762)
chr4 (105-252)||(49269737-49269884)
chr4 (125-258)||(5680491-5680624)
chr4 (105-208)||(15405793-15405896)
chr4 (3-99)||(15262599-15262694)
chr4 (3-99)||(16679980-16680076)
chr4 (105-212)||(33926123-33926230)
chr4 (3-93)||(13820497-13820587)
chr4 (100-212)||(44809795-44809907)
chr4 (105-212)||(29323981-29324088)
chr4 (125-219)||(14571048-14571142)
chr4 (144-212)||(15812973-15813041)
chr4 (105-179)||(44164003-44164078)
chr4 (105-194)||(12782108-12782197)
chr4 (108-209)||(34320738-34320839)
chr4 (111-194)||(21418987-21419070)
chr4 (105-179)||(27677889-27677964)
chr4 (105-194)||(3718338-3718427)
chr4 (105-194)||(15430674-15430764)
chr4 (105-194)||(15437288-15437378)
chr4 (105-194)||(27013231-27013321)
chr4 (140-194)||(37741471-37741525)
chr4 (111-194)||(40794200-40794283)
chr4 (105-179)||(52007355-52007429)
chr4 (105-194)||(27691933-27692023)
chr4 (105-179)||(53010382-53010456)
chr4 (105-172)||(19819952-19820020)
chr4 (3-99)||(4031-4127)
chr4 (105-141)||(17669449-17669485)
chr4 (105-194)||(19826703-19826793)
[»] chr3 (39 HSPs)
chr3 (105-266)||(538017-538178)
chr3 (105-266)||(6921892-6922053)
chr3 (105-266)||(52198307-52198468)
chr3 (105-266)||(23299390-23299551)
chr3 (105-266)||(18645578-18645739)
chr3 (105-264)||(10884020-10884179)
chr3 (105-228)||(10107489-10107612)
chr3 (105-266)||(16185493-16185654)
chr3 (108-207)||(17532565-17532664)
chr3 (105-266)||(35411678-35411840)
chr3 (3-99)||(12162609-12162705)
chr3 (3-93)||(11876847-11876937)
chr3 (105-194)||(53814973-53815062)
chr3 (3-99)||(3341738-3341833)
chr3 (125-260)||(22994435-22994570)
chr3 (105-195)||(29344680-29344771)
chr3 (3-99)||(892007-892102)
chr3 (124-212)||(19302255-19302343)
chr3 (3-99)||(13197901-13197997)
chr3 (215-266)||(9380143-9380194)
chr3 (3-94)||(10162725-10162816)
chr3 (105-194)||(16243168-16243257)
chr3 (105-166)||(54460369-54460430)
chr3 (105-194)||(3839792-3839884)
chr3 (105-172)||(9380013-9380080)
chr3 (100-179)||(20729400-20729480)
chr3 (187-231)||(55032789-55032833)
chr3 (154-193)||(17529546-17529585)
chr3 (105-179)||(41976323-41976397)
chr3 (3-99)||(13507059-13507154)
chr3 (105-193)||(34984668-34984756)
chr3 (3-99)||(12382252-12382348)
chr3 (3-59)||(15642701-15642756)
chr3 (149-205)||(19305445-19305501)
chr3 (105-179)||(10880778-10880852)
chr3 (111-172)||(54736781-54736842)
chr3 (109-141)||(10958777-10958809)
chr3 (109-141)||(10962434-10962466)
chr3 (109-141)||(10965943-10965975)
[»] chr6 (22 HSPs)
chr6 (107-266)||(23388989-23389149)
chr6 (107-266)||(23379650-23379810)
chr6 (105-266)||(5739026-5739188)
chr6 (105-266)||(34501418-34501577)
chr6 (105-263)||(2371415-2371573)
chr6 (105-266)||(9953038-9953199)
chr6 (105-212)||(31071496-31071603)
chr6 (6-99)||(18427260-18427352)
chr6 (140-210)||(6512433-6512503)
chr6 (137-212)||(13004433-13004509)
chr6 (3-83)||(20167830-20167910)
chr6 (3-83)||(22168092-22168172)
chr6 (3-90)||(10716071-10716158)
chr6 (3-93)||(22769643-22769733)
chr6 (3-93)||(25588236-25588326)
chr6 (3-99)||(20018776-20018870)
chr6 (105-179)||(28666100-28666174)
chr6 (105-194)||(10289188-10289277)
chr6 (3-99)||(11217456-11217551)
chr6 (144-212)||(28112641-28112709)
chr6 (22-81)||(23520279-23520338)
chr6 (141-213)||(14282373-14282445)
[»] scaffold0005 (2 HSPs)
scaffold0005 (114-264)||(290974-291124)
scaffold0005 (125-219)||(246234-246328)
[»] chr1 (17 HSPs)
chr1 (100-266)||(1951182-1951348)
chr1 (105-266)||(2793301-2793462)
chr1 (105-258)||(49499413-49499566)
chr1 (105-266)||(29644145-29644306)
chr1 (105-212)||(31204016-31204123)
chr1 (143-266)||(34733100-34733223)
chr1 (6-99)||(19782601-19782694)
chr1 (105-212)||(6071791-6071893)
chr1 (105-212)||(27537104-27537211)
chr1 (105-212)||(45961598-45961705)
chr1 (105-195)||(41059141-41059232)
chr1 (105-179)||(2404724-2404798)
chr1 (105-194)||(42021723-42021812)
chr1 (23-59)||(19878218-19878254)
chr1 (3-59)||(21801210-21801265)
chr1 (105-179)||(21019292-21019365)
chr1 (105-141)||(47708779-47708815)
[»] scaffold0035 (1 HSPs)
scaffold0035 (105-252)||(61599-61746)
[»] scaffold0334 (1 HSPs)
scaffold0334 (105-227)||(18465-18588)
[»] scaffold0016 (1 HSPs)
scaffold0016 (6-102)||(196472-196568)
[»] scaffold0151 (1 HSPs)
scaffold0151 (13-102)||(32876-32965)
[»] scaffold0045 (1 HSPs)
scaffold0045 (105-209)||(88967-89071)
[»] scaffold1400 (1 HSPs)
scaffold1400 (3-99)||(991-1086)
[»] scaffold1684 (1 HSPs)
scaffold1684 (105-208)||(369-472)
[»] scaffold0080 (1 HSPs)
scaffold0080 (189-266)||(26331-26408)
[»] scaffold0506 (1 HSPs)
scaffold0506 (3-99)||(4591-4687)
[»] scaffold0022 (1 HSPs)
scaffold0022 (3-99)||(16986-17082)
[»] scaffold0032 (1 HSPs)
scaffold0032 (6-99)||(89746-89839)
[»] scaffold0757 (1 HSPs)
scaffold0757 (105-194)||(4565-4654)
[»] scaffold0015 (1 HSPs)
scaffold0015 (105-222)||(197244-197361)
[»] scaffold1799 (1 HSPs)
scaffold1799 (3-99)||(653-749)
[»] scaffold0156 (1 HSPs)
scaffold0156 (3-99)||(8995-9091)
[»] scaffold0078 (1 HSPs)
scaffold0078 (3-99)||(28133-28235)
[»] scaffold0381 (1 HSPs)
scaffold0381 (105-194)||(6462-6552)
[»] scaffold0270 (3 HSPs)
scaffold0270 (105-194)||(969-1058)
scaffold0270 (99-194)||(4329-4424)
scaffold0270 (99-194)||(11459-11554)
[»] scaffold0011 (1 HSPs)
scaffold0011 (14-99)||(30348-30434)
[»] scaffold0150 (1 HSPs)
scaffold0150 (8-99)||(22061-22151)
[»] scaffold0520 (1 HSPs)
scaffold0520 (105-193)||(4790-4878)
[»] scaffold0051 (1 HSPs)
scaffold0051 (3-86)||(26900-26983)
[»] scaffold1756 (1 HSPs)
scaffold1756 (68-99)||(294-325)
[»] scaffold0146 (1 HSPs)
scaffold0146 (3-53)||(20506-20556)
[»] scaffold0741 (1 HSPs)
scaffold0741 (3-55)||(623-675)
[»] scaffold0567 (1 HSPs)
scaffold0567 (105-141)||(7017-7053)
[»] scaffold0326 (2 HSPs)
scaffold0326 (3-99)||(7086-7182)
scaffold0326 (3-99)||(14988-15084)
[»] scaffold0142 (1 HSPs)
scaffold0142 (3-55)||(23544-23596)
[»] scaffold0075 (1 HSPs)
scaffold0075 (3-99)||(36882-36978)
[»] scaffold0026 (1 HSPs)
scaffold0026 (3-55)||(131588-131640)
[»] scaffold0018 (1 HSPs)
scaffold0018 (3-55)||(14981-15033)


Alignment Details
Target: chr7 (Bit Score: 158; Significance: 4e-84; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 105 - 266
Target Start/End: Original strand, 10431388 - 10431549
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagattt 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10431388 atgacagtcagtcattcactatttttagtgtcattttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagattt 10431487  T
Q  205 tgaagaaagcaaaattgtgtcacgattgttaaaaacgtgtcacgatttagagcacaggatga 266  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  10431488 tgaagaaagcaaaattgtgtcacgattgttgaaaacgtgtcacgatttagagcacaggatga 10431549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 105 - 266
Target Start/End: Original strand, 26556512 - 26556673
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagattt 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||||| |||||||    
T  26556512 atgacagtcagtcattcactatttttagtgtcattttcatgatattttgagttcacaagcaagcttaaacaacaaagaaagcaagaaaaatagaagattt 26556611  T
Q  205 tgaagaaagcaaaattgtgtcacgattgttaaaaacgtgtcacgatttagagcacaggatga 266  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| |||||    
T  26556612 tgaagaaagcaaaatcgtgtcacgattgttgaaaacgtgtcacgatttagagcacatgatga 26556673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 105 - 266
Target Start/End: Original strand, 4542076 - 4542237
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagattt 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  4542076 atgacagtcagtcattcactatttttagtgtcattttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatagaagattt 4542175  T
Q  205 tgaagaaagcaaaattgtgtcacgattgttaaaaacgtgtcacgatttagagcacaggatga 266  Q
    ||| ||||||||| |||||||||||||||| |||| |||||| ||||| ||||| |||||||    
T  4542176 tgaggaaagcaaatttgtgtcacgattgttgaaaatgtgtcatgatttggagcataggatga 4542237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 105 - 266
Target Start/End: Complemental strand, 2442275 - 2442114
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagattt 204  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||     
T  2442275 atgacagtcagtcattcactattttaagtgtcattttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatagaagattc 2442176  T
Q  205 tgaagaaagcaaaattgtgtcacgattgttaaaaacgtgtcacgatttagagcacaggatga 266  Q
    ||| ||||||||| | |||||||||||||| ||||||| |||||||||  |||| |||||||    
T  2442175 tgaggaaagcaaattcgtgtcacgattgttgaaaacgtatcacgatttgaagcataggatga 2442114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 105 - 266
Target Start/End: Original strand, 8276014 - 8276175
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatatttt-gagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagatt 203  Q
    ||||||||| |||||||  ||||||||| ||| |||| |||||||||| ||||||||||||||| | || ||||||  ||| ||||||||||| ||||||    
T  8276014 atgacagtctgtcattccatatttttagagtcttttt-atgatatttttgagttcacaagcaagctcaagcagcaagaaaagcaagaaaaatagaagatt 8276112  T
Q  204 ttgaagaaagcaaaattgtgtcacgattgttaaaaacgtgtcacgatttagagcacaggatga 266  Q
    ||||||||| |||||| |||||| ||||||| ||||||| ||||||||| ||||||| |||||    
T  8276113 ttgaagaaaacaaaatcgtgtcatgattgttgaaaacgtatcacgatttggagcacatgatga 8276175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 105 - 212
Target Start/End: Original strand, 16164891 - 16164998
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagattt 204  Q
    |||||||||||||||||  |||||||||||| ||||||||||| ||||||||||||||||||| ||||||| ||| |||| || |||||||| |||||||    
T  16164891 atgacagtcagtcattcgttatttttagtgtaattttcatgatgttttgagttcacaagcaagcttaaacaacaaggaaagcatgaaaaatacaagattt 16164990  T
Q  205 tgaagaaa 212  Q
    ||||||||    
T  16164991 tgaagaaa 16164998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 105 - 212
Target Start/End: Original strand, 48644618 - 48644725
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagattt 204  Q
    |||||||||||||||||  ||||||||||||||||||||| || ||||||||||||||||||| ||||||| ||| |||| || |||||||| |||||||    
T  48644618 atgacagtcagtcattctttatttttagtgtcattttcataatgttttgagttcacaagcaagcttaaacaacaaggaaagcatgaaaaatacaagattt 48644717  T
Q  205 tgaagaaa 212  Q
    ||||||||    
T  48644718 tgaagaaa 48644725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 16529706 - 16529610
Alignment:
Q  3 gagttttaggggttgggttatggagattggtgaagattttctggtttttgggttagggtaggaggggttatgaatttgggtgatgttggtttggatg 99  Q
    ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| ||  | ||||||  |||||||||||||||||||||||||    
T  16529706 gagttttaggggttgggttatggaggttggtgaagaatttctggtttttgggttaggttaataagggttactaatttgggtgatgttggtttggatg 16529610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 16762324 - 16762420
Alignment:
Q  3 gagttttaggggttgggttatggagattggtgaagattttctggtttttgggttagggtaggaggggttatgaatttgggtgatgttggtttggatg 99  Q
    |||||||||||||||||||||||| ||||||||||| ||| |||||||||||||||| ||    |||||| ||||||||||||||||||||||||||    
T  16762324 gagttttaggggttgggttatggaaattggtgaagaatttttggtttttgggttaggttaatgagggttacgaatttgggtgatgttggtttggatg 16762420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 16763513 - 16763609
Alignment:
Q  3 gagttttaggggttgggttatggagattggtgaagattttctggtttttgggttagggtaggaggggttatgaatttgggtgatgttggtttggatg 99  Q
    |||||||||||||||||||||||| ||||||||||| ||| |||||||||||||||| ||    |||||| ||||||||||||||||||||||||||    
T  16763513 gagttttaggggttgggttatggaaattggtgaagaatttttggtttttgggttaggttaatgagggttacgaatttgggtgatgttggtttggatg 16763609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 105 - 212
Target Start/End: Original strand, 6602623 - 6602730
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagattt 204  Q
    |||||||||||||||||  ||||||||||||||| ||||| || |||| |||||||||||||| ||||||| ||| ||||  | |||||||| |||||||    
T  6602623 atgacagtcagtcattcgttatttttagtgtcatgttcataatgttttaagttcacaagcaagcttaaacaacaaggaaagtatgaaaaatacaagattt 6602722  T
Q  205 tgaagaaa 212  Q
    ||||||||    
T  6602723 tgaagaaa 6602730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 105 - 184
Target Start/End: Complemental strand, 48645919 - 48645840
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatattttgagttcacaagcaagtttaaacagcaaagaaa 184  Q
    |||||||||||||||||  |||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||| ||||    
T  48645919 atgacagtcagtcattctttatttttagtgtcattttcatgatgttttgagttcacaagcaagcttaaacaacaaggaaa 48645840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 105 - 194
Target Start/End: Complemental strand, 45288136 - 45288047
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatatttt-gagttcacaagcaagtttaaacagcaaagaaaacaagaaaaa 194  Q
    |||||||||||||||||||||||||||| ||| |||| |||||||||| ||||||||||||||| |||| ||||||  |||||||||||||    
T  45288136 atgacagtcagtcattcactatttttagagtcttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaaacaagaaaaa 45288047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 105 - 194
Target Start/End: Complemental strand, 45291472 - 45291383
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatatttt-gagttcacaagcaagtttaaacagcaaagaaaacaagaaaaa 194  Q
    |||||||||||||||||||||||||||| ||| |||| |||||||||| ||||||||||||||| |||| ||||||  |||||||||||||    
T  45291472 atgacagtcagtcattcactatttttagagtcttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaaacaagaaaaa 45291383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 18595805 - 18595900
Alignment:
Q  3 gagttttaggggttgggttatggagattggtgaagattttctggtttttgggttagg-gtaggaggggttatgaatttgggtgatgttggtttggatg 99  Q
    ||||||| |||||||||||||||||||||||||||| |||  |||||||||||||||  || || |||||| |||||||||||||||| |||||||||    
T  18595805 gagttttgggggttgggttatggagattggtgaagaattttaggtttttgggttaggtttatga-gggttacgaatttgggtgatgtt-gtttggatg 18595900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 18615879 - 18615784
Alignment:
Q  3 gagttttaggggttgggttatggagattggtgaagattttctggtttttgggttagg-gtaggaggggttatgaatttgggtgatgttggtttggatg 99  Q
    ||||||| |||||||||||||||||||||||||||| |||  |||||||||||||||  || || |||||| |||||||||||||||| |||||||||    
T  18615879 gagttttgggggttgggttatggagattggtgaagaattttaggtttttgggttaggtttatga-gggttacgaatttgggtgatgtt-gtttggatg 18615784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 105 - 213
Target Start/End: Complemental strand, 20081638 - 20081530
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatatttt-gagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagatt 203  Q
    |||||||||||||||||||||||||||| ||  |||| |||||||||| ||||||||||||||| |||| ||||||  ||| ||||||||||  ||||      
T  20081638 atgacagtcagtcattcactatttttagagtgttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaagcaagaaaaatcaaagaaa 20081540  T
Q  204 ttgaagaaag 213  Q
    ||||||||||    
T  20081539 ttgaagaaag 20081530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 105 - 195
Target Start/End: Original strand, 17729975 - 17730065
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatatttt-gagttcacaagcaagtttaaacagcaaagaaaacaagaaaaat 195  Q
    ||||||||||||| |||||||||||||| ||| |||| |||||||||| ||||||||||||||| |||| ||||||  ||| ||||||||||    
T  17729975 atgacagtcagtctttcactatttttagagtcctttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaagcaagaaaaat 17730065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 105 - 194
Target Start/End: Complemental strand, 9865640 - 9865551
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatatttt-gagttcacaagcaagtttaaacagcaaagaaaacaagaaaaa 194  Q
    ||||||||||||||||| |||||||||| ||| |||| |||||||||| ||||||||||||||| |||| ||||||  ||| |||||||||    
T  9865640 atgacagtcagtcattcgctatttttagagtcttttt-atgatatttttgagttcacaagcaagattaagcagcaagaaaagcaagaaaaa 9865551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 99
Target Start/End: Complemental strand, 13671534 - 13671441
Alignment:
Q  4 agttttaggggttgggttatggagattggtgaagattttctggtttttgggttagg-gtaggaggggttatgaatttgggtgatgttggtttggatg 99  Q
    |||||| |||||||||||||| ||||||||||||| |||  |||||||||||||||  ||||| |||||| |||||||||||||||| |||||||||    
T  13671534 agttttgggggttgggttatg-agattggtgaagaattttaggtttttgggttaggtttagga-gggttacgaatttgggtgatgtt-gtttggatg 13671441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 13655675 - 13655579
Alignment:
Q  3 gagttttaggggttgggttatggagattggtgaagattttctggtttttgggttagggtaggaggggttatgaatttgggtgatgttggtttggatg 99  Q
    |||||||| | |||||||| ||||| ||||||| || ||| ||| |||||||||||| ||   ||||| | ||||||||||||  ||||||||||||    
T  13655675 gagttttaagagttgggttgtggagtttggtgatgaatttgtgggttttgggttaggttaattggggtgacgaatttgggtgaatttggtttggatg 13655579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 14146719 - 14146815
Alignment:
Q  3 gagttttaggggttgggttatggagattggtgaagattttctggtttttgggttagggtaggaggggttatgaatttgggtgatgttggtttggatg 99  Q
    |||||||| | ||||| || ||||| ||||||| || ||| ||| |||||||||||| ||   ||||| | ||||||||||||| ||||||||||||    
T  14146719 gagttttaagagttggattgtggagtttggtgatgaatttgtgggttttgggttaggttaatgggggtgacgaatttgggtgattttggtttggatg 14146815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 11957343 - 11957395
Alignment:
Q  3 gagttttaggggttgggttatggagattggtgaagattttctggtttttgggt 55  Q
    ||||||||||||||||||| |||| |||||||| || ||| ||| ||||||||    
T  11957343 gagttttaggggttgggttttggaaattggtgatgaatttgtgggttttgggt 11957395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 15063772 - 15063720
Alignment:
Q  3 gagttttaggggttgggttatggagattggtgaagattttctggtttttgggt 55  Q
    |||||||||||||||| || |||| |||||||| || ||| ||||||||||||    
T  15063772 gagttttaggggttggattgtggaaattggtgatgaatttgtggtttttgggt 15063720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 15459807 - 15459755
Alignment:
Q  3 gagttttaggggttgggttatggagattggtgaagattttctggtttttgggt 55  Q
    ||||||||||||||||||| |||| |||||||| || ||| ||| ||||||||    
T  15459807 gagttttaggggttgggttgtggaaattggtgatgaatttgtgggttttgggt 15459755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 15922191 - 15922243
Alignment:
Q  3 gagttttaggggttgggttatggagattggtgaagattttctggtttttgggt 55  Q
    ||||||||||||||||||| |||| |||||||| || ||| ||| ||||||||    
T  15922191 gagttttaggggttgggttgtggaaattggtgatgaatttgtgggttttgggt 15922243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 158; Significance: 4e-84; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 105 - 266
Target Start/End: Complemental strand, 28442179 - 28442018
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagattt 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28442179 atgacagtcagtcattcactatttttagtgtcattttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagattt 28442080  T
Q  205 tgaagaaagcaaaattgtgtcacgattgttaaaaacgtgtcacgatttagagcacaggatga 266  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  28442079 tgaagaaagcaaaattgtgtcacgattgttgaaaacgtgtcacgatttagagcacaggatga 28442018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 105 - 266
Target Start/End: Original strand, 42061488 - 42061649
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagattt 204  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  42061488 atgacagtcagtcattcactgtttttagtgtcattttcatgatattttgagttcacaagcaagcttaaacagcaaagaaaacaagaaaaatagaagattt 42061587  T
Q  205 tgaagaaagcaaaattgtgtcacgattgttaaaaacgtgtcacgatttagagcacaggatga 266  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||  |||||| |||||    
T  42061588 tgaagaaagcaaaatcgtgtcacgattgttgaaaacgtgtcacgatttgaagcacatgatga 42061649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 105 - 266
Target Start/End: Original strand, 31862874 - 31863035
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagattt 204  Q
    |||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||||| ||||||| |||||||| ||||||||||| || ||||    
T  31862874 atgacagtcagtcattccttatttttagtgtcattttcataatattttgagttcacaagcaagcttaaacaacaaagaaagcaagaaaaatagaaaattt 31862973  T
Q  205 tgaagaaagcaaaattgtgtcacgattgttaaaaacgtgtcacgatttagagcacaggatga 266  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| |||||    
T  31862974 tgaagaaagcaaaatcgtgtcacgattgttgaaaacgtgtcacgatttagagcacatgatga 31863035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 105 - 231
Target Start/End: Complemental strand, 14376832 - 14376706
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagattt 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||    
T  14376832 atgacagtcagtcattcactatttttagtgtcattttcatgatattttgagttcacaagcaagtttaaacaacaaagaaatcaagaaaaatagaagattt 14376733  T
Q  205 tgaagaaagcaaaattgtgtcacgatt 231  Q
    ||| ||||||||| | |||||||||||    
T  14376732 tgaggaaagcaaattcgtgtcacgatt 14376706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 105 - 266
Target Start/End: Original strand, 43490795 - 43490956
Alignment:
Q  105 atgacagtcagtcatt-cactatttttagtgtcattttcatgatatttt-gagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagat 202  Q
    ||||||||| |||||| ||| |||||||| ||| |||| |||||||||| |||||||||| |||| |||| ||||||  ||| ||||||||||| |||||    
T  43490795 atgacagtctgtcatttcac-atttttagagtcttttt-atgatatttttgagttcacaaacaagcttaagcagcaagaaaagcaagaaaaatagaagat 43490892  T
Q  203 tttgaagaaagcaaaattgtgtcacgattgttaaaaacgtgtcacgatttagagcacaggatga 266  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||||  |||||||||||||    
T  43490893 tttgaagaaagcaaaatcgtgtcacgattgttgaaaacgtgtcacgattaggagcacaggatga 43490956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 98 - 266
Target Start/End: Original strand, 37214761 - 37214929
Alignment:
Q  98 tgtattaatgacagtcagtcattcactatttttagtgtcattttcatgatatttt-gagttcacaagcaagtttaaacagcaaagaaaacaagaaaaata 196  Q
    |||||| || |||||| |||||||   |||||||| ||| |||| |||||||||| ||||||||||||||| |||| ||||||  ||| |||||||||||    
T  37214761 tgtattgataacagtctgtcattccacatttttagagtcttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaagcaagaaaaata 37214859  T
Q  197 taagattttgaagaaagcaaaattgtgtcacgattgttaaaaacgtgtcacgatttagagcacaggatga 266  Q
     |||||||||||||||||||||| || |||| |||||| ||||| ||||||||||| |||||||||||||    
T  37214860 gaagattttgaagaaagcaaaatcgtatcacaattgttgaaaacatgtcacgatttggagcacaggatga 37214929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 125 - 266
Target Start/End: Original strand, 32837105 - 32837246
Alignment:
Q  125 atttttagtgtcattttcatgatatttt-gagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagattttgaagaaagcaaaattgtg 223  Q
    |||||||| ||| |||| |||||||||| ||||||||||||||| |||| ||||||  |||  |||||||||| |||||||||||||||||||||| |||    
T  32837105 atttttagagtcttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaagaaagaaaaatagaagattttgaagaaagcaaaatcgtg 32837203  T
Q  224 tcacgattgttaaaaacgtgtcacgatttagagcacaggatga 266  Q
    ||| ||||||| ||||||||||||||||| ||||| |||||||    
T  32837204 tcatgattgttgaaaacgtgtcacgatttggagcataggatga 32837246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 105 - 266
Target Start/End: Complemental strand, 22938053 - 22937892
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatatttt-gagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagatt 203  Q
    ||||||||| |||||||    ||||||| ||| |||| |||||||||| ||||||||||||||| |||| ||||||  ||| ||||||||||| ||||||    
T  22938053 atgacagtctgtcattccacgtttttagagtcttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaagcaagaaaaatagaagatt 22937955  T
Q  204 ttgaagaaagcaaaattgtgtcacgattgttaaaaacgtgtcacgatttagagcacaggatga 266  Q
    |||||||||||||||| ||| |||| ||||| ||||||| ||||||||| ||||||| |||||    
T  22937954 ttgaagaaagcaaaatcgtgccacggttgttgaaaacgtatcacgatttggagcacaagatga 22937892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 25118690 - 25118786
Alignment:
Q  3 gagttttaggggttgggttatggagattggtgaagattttctggtttttgggttagggtaggaggggttatgaatttgggtgatgttggtttggatg 99  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| || |  ||||||  |||||||| ||||||||||||||||    
T  25118690 gagttttaggggttgggttatggagattggtggagaatttctggtttttgggttaggttaaggagggttacaaatttgggcgatgttggtttggatg 25118786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 25177781 - 25177877
Alignment:
Q  3 gagttttaggggttgggttatggagattggtgaagattttctggtttttgggttagggtaggaggggttatgaatttgggtgatgttggtttggatg 99  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| || |  ||||||  |||||||| ||||||||||||||||    
T  25177781 gagttttaggggttgggttatggagattggtggagaatttctggtttttgggttaggttaaggagggttacaaatttgggcgatgttggtttggatg 25177877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 105 - 212
Target Start/End: Complemental strand, 14017034 - 14016927
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgata-ttttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagatt 203  Q
    ||||||||||||||||  |||||||||| ||| |||| |||||| ||||||||||||||||||| ||||||| ||| |||| || |||||||| ||||||    
T  14017034 atgacagtcagtcatttgctatttttagagtcttttt-atgataattttgagttcacaagcaagcttaaacaacaaggaaagcatgaaaaatacaagatt 14016936  T
Q  204 ttgaagaaa 212  Q
    |||||||||    
T  14016935 ttgaagaaa 14016927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 20440709 - 20440804
Alignment:
Q  3 gagttttaggggttgggttatggagattggtgaagattttctggtttttgggttagggtaggaggggttatgaatttgggtgatgttggtttggatg 99  Q
    ||||||||||||||||||||||| |||||| ||||| |||||||||||||||||||| ||    |||||| |||||||||||||||| |||||||||    
T  20440709 gagttttaggggttgggttatggggattggggaagaatttctggtttttgggttaggttaatgagggttacgaatttgggtgatgtt-gtttggatg 20440804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 105 - 212
Target Start/End: Original strand, 17747619 - 17747726
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgata-ttttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagatt 203  Q
    ||||||||||||||||  |||||||||| ||| |||| |||||| ||||||||||| ||| ||| ||||||| ||| |||| || |||||||| ||||||    
T  17747619 atgacagtcagtcatttgctatttttagagtcttttt-atgataattttgagttcataagaaagcttaaacaacaaggaaagcatgaaaaatacaagatt 17747717  T
Q  204 ttgaagaaa 212  Q
    |||||||||    
T  17747718 ttgaagaaa 17747726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 134 - 212
Target Start/End: Original strand, 7624288 - 7624366
Alignment:
Q  134 gtcattttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagattttgaagaaa 212  Q
    |||||||| ||||| ||||||||||||| ||||| ||||||| ||| |||| || |||||||| |||||||||||||||    
T  7624288 gtcattttaatgatgttttgagttcacaggcaagcttaaacaacaaggaaagcatgaaaaatacaagattttgaagaaa 7624366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 105 - 194
Target Start/End: Complemental strand, 21336740 - 21336650
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgata-ttttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaa 194  Q
    |||||||||||||||||||||||||||| ||| |||| || ||| ||||||||||||||||||| |||| || |||  ||| |||||||||    
T  21336740 atgacagtcagtcattcactatttttagagtcttttttattatatttttgagttcacaagcaagcttaagcaacaagaaaagcaagaaaaa 21336650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 105 - 194
Target Start/End: Complemental strand, 21828039 - 21827949
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgata-ttttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaa 194  Q
    ||||||||||||||||| |||||||||| ||| |||| |||||| |||||||||| |||||||| |||| ||||||  ||| |||||||||    
T  21828039 atgacagtcagtcattcgctatttttagagtcttttttatgatatttttgagttcgcaagcaagcttaagcagcaagaaaagcaagaaaaa 21827949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 30765649 - 30765744
Alignment:
Q  3 gagttttaggggttgggttatggagattggtgaagattttctggtttttgggttagggtaggaggggttatgaatttgggtgatgttggtttggatg 99  Q
    |||||||||||||||||||||||| ||| | ||||| |||||||||||||| ||||| ||    |||||| ||||||||| |||||| |||||||||    
T  30765649 gagttttaggggttgggttatggatatttgggaagaatttctggtttttggtttaggttaatgagggttacgaatttgggggatgtt-gtttggatg 30765744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 105 - 195
Target Start/End: Complemental strand, 28788399 - 28788309
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatattttg-agttcacaagcaagtttaaacagcaaagaaaacaagaaaaat 195  Q
    ||||||||||||||||  |||||||||| ||| |||| ||||||||||  |||||||||||||| |||| ||||||  ||||||||||||||    
T  28788399 atgacagtcagtcatttgctatttttagagtcttttt-atgatattttttagttcacaagcaagcttaagcagcaagaaaaacaagaaaaat 28788309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 22319958 - 22320054
Alignment:
Q  3 gagttttaggggttgggttatggagattggtgaagattttctggtttttgggttagggtaggaggggttatgaatttgggtgatgttggtttggatg 99  Q
    |||||||| | |||||||| ||||| ||||||| || ||| ||| |||||||||||| ||   ||||| | ||||||||||||| ||||||||||||    
T  22319958 gagttttaagagttgggttgtggagtttggtgatgaatttgtgggttttgggttaggttaatgggggtgacgaatttgggtgattttggtttggatg 22320054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 215 - 266
Target Start/End: Complemental strand, 21336609 - 21336558
Alignment:
Q  215 aaaattgtgtcacgattgttaaaaacgtgtcacgatttagagcacaggatga 266  Q
    ||||| |||||||| ||||| ||||| |||||||||||||||||||||||||    
T  21336609 aaaatcgtgtcacggttgttgaaaacatgtcacgatttagagcacaggatga 21336558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 105 - 194
Target Start/End: Original strand, 39191333 - 39191422
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgata-ttttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaa 194  Q
    |||||||||| |||||   ||||||||| ||| |||| |||||| ||||||||||||||||||| |||| ||||||  |||||||||||||    
T  39191333 atgacagtcaatcatttgttatttttagagtcttttt-atgatacttttgagttcacaagcaagcttaagcagcaagaaaaacaagaaaaa 39191422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 105 - 167
Target Start/End: Original strand, 7270243 - 7270305
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatatttt-gagttcacaagcaag 167  Q
    ||||||||| ||||||| |||||||||| ||| |||| |||||||||| |||||||||||||||    
T  7270243 atgacagtctgtcattcgctatttttagagtcttttt-atgatatttttgagttcacaagcaag 7270305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 215 - 266
Target Start/End: Complemental strand, 21827908 - 21827857
Alignment:
Q  215 aaaattgtgtcacgattgttaaaaacgtgtcacgatttagagcacaggatga 266  Q
    ||||| |||||||| ||||| || ||||||||||||||||| ||||||||||    
T  21827908 aaaatcgtgtcacggttgttgaatacgtgtcacgatttagaacacaggatga 21827857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 194
Target Start/End: Original strand, 18031712 - 18031801
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatatttt-gagttcacaagcaagtttaaacagcaaagaaaacaagaaaaa 194  Q
    |||| |||| |||||||  ||||||||| ||| |||| |||||||||| ||||||| |||||||||||| ||||||  ||| |||||||||    
T  18031712 atgatagtccgtcattccatatttttagagtcttttt-atgatattttcgagttcaaaagcaagtttaagcagcaagaaaagcaagaaaaa 18031801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 266
Target Start/End: Original strand, 39191449 - 39191494
Alignment:
Q  221 gtgtcacgattgttaaaaacgtgtcacgatttagagcacaggatga 266  Q
    |||||||||||||| |||||||||||| ||||| || |||||||||    
T  39191449 gtgtcacgattgttgaaaacgtgtcacaatttaaagtacaggatga 39191494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 24965799 - 24965854
Alignment:
Q  3 gagttttaggggttgggttatggagattggtgaagattttctggtttttgggttagg 59  Q
    ||||||| ||||||||||| || ||||||||||||| |||  |||||||||||||||    
T  24965799 gagttttgggggttgggttctg-agattggtgaagaattttaggtttttgggttagg 24965854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 138; Significance: 3e-72; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 105 - 266
Target Start/End: Complemental strand, 36809433 - 36809272
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagattt 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  36809433 atgacagtcagtcattcactatttttagtgtcattttcatgatattttgagttcacaagcaagtttaaacaacaaagaaaacaagaaaaatagaagattt 36809334  T
Q  205 tgaagaaagcaaaattgtgtcacgattgttaaaaacgtgtcacgatttagagcacaggatga 266  Q
    ||| ||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||    
T  36809333 tgaggaaagcaaatttgtgtcacgattgttgaaaacgtgtcacgatttggagcacaggatga 36809272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 105 - 266
Target Start/End: Original strand, 26358674 - 26358835
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagattt 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| |||||||    
T  26358674 atgacagtcagtcattcactatttttagtgtcattttcatgatattttgagttcacaaggaagtttaaacagcaaagaagacaagaaaaatagaagattt 26358773  T
Q  205 tgaagaaagcaaaattgtgtcacgattgttaaaaacgtgtcacgatttagagcacaggatga 266  Q
     |||||||||||||| |||||||||||||| |||||||| |||||||| |||||||||||||    
T  26358774 cgaagaaagcaaaatcgtgtcacgattgttgaaaacgtggcacgatttggagcacaggatga 26358835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 105 - 266
Target Start/End: Original strand, 25869837 - 25869998
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagattt 204  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||| |||||||    
T  25869837 atgacagtcagtcattcactatttttagagtctttttcatgatattttgagttcacaagaaagtttaaacaacaaagaaaacaagagaaatagaagattt 25869936  T
Q  205 tgaagaaagcaaaattgtgtcacgattgttaaaaacgtgtcacgatttagagcacaggatga 266  Q
    ||||||||| ||||| |||||||||||||  ||||||||||||||||| |||||||||||||    
T  25869937 tgaagaaagaaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcacaggatga 25869998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 105 - 266
Target Start/End: Original strand, 25873205 - 25873366
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagattt 204  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||    
T  25873205 atgacagtcagtcattcactatttttagagtctttttcatgatattttgagttcacaagcaagtttaaacaacaaagaaaacaagagaaatagaagattt 25873304  T
Q  205 tgaagaaagcaaaattgtgtcacgattgttaaaaacgtgtcacgatttagagcacaggatga 266  Q
    ||||||||| ||||| |||||||||||||  ||||||||||| ||||| |||||||||||||    
T  25873305 tgaagaaagaaaaatcgtgtcacgattgtcgaaaacgtgtcatgatttggagcacaggatga 25873366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 108 - 266
Target Start/End: Complemental strand, 38006281 - 38006123
Alignment:
Q  108 acagtcagtcattcactatttttagtgtcattttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagattttga 207  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| ||||||| |||||||| ||||| ||||| ||||||||||    
T  38006281 acagtcagtcattcactgtttttagtgtcattttcatgatattttgagttcacaaacaagcttaaacaacaaagaaagcaagagaaatagaagattttga 38006182  T
Q  208 agaaagcaaaattgtgtcacgattgttaaaaacgtgtcacgatttagagcacaggatga 266  Q
    |||||||||||| |||| ||||||||  ||||||||||||||||| |||||||||||||    
T  38006181 agaaagcaaaatcgtgtgacgattgtcgaaaacgtgtcacgatttggagcacaggatga 38006123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 105 - 266
Target Start/End: Complemental strand, 30275689 - 30275528
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagattt 204  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||||||||| |||||||||||||||||||| |||||||    
T  30275689 atgatagtcagtcattcaatatttttagtgtcattttcatgatattttgaattcacaaacaagtttaaacaacaaagaaaacaagaaaaatagaagattt 30275590  T
Q  205 tgaagaaagcaaaattgtgtcacgattgttaaaaacgtgtcacgatttagagcacaggatga 266  Q
    ||| ||||||||| | |||||||||||||| ||||||||||||||||| ||||  |||||||    
T  30275589 tgaggaaagcaaattcgtgtcacgattgttgaaaacgtgtcacgatttggagcgtaggatga 30275528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 105 - 266
Target Start/End: Complemental strand, 25821920 - 25821754
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatat----tttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataag 200  Q
    |||||||||||||||||||| ||||||||||||||||||||||||    |||||||||||||||||| ||||||| |||||||||||||||||||| |||    
T  25821920 atgacagtcagtcattcactgtttttagtgtcattttcatgatatatattttgagttcacaagcaagcttaaacaacaaagaaaacaagaaaaatagaag 25821821  T
Q  201 a-ttttgaagaaagcaaaattgtgtcacgattgttaaaaacgtgtcacgatttagagcacaggatga 266  Q
    | |||||||||||||||||| |||||| ||||||| |||| |||||||||||| || ||||||||||    
T  25821820 atttttgaagaaagcaaaatcgtgtcaagattgttgaaaaggtgtcacgatttggaacacaggatga 25821754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 105 - 231
Target Start/End: Original strand, 15466172 - 15466298
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagattt 204  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||| ||||| |||||||    
T  15466172 atgacaatcagtcattcactatttttagtgtcattttcatgatattttgagttcacaagcaagcttaaacaacaaagaaatcaagagaaatagaagattt 15466271  T
Q  205 tgaagaaagcaaaattgtgtcacgatt 231  Q
    ||||||||||||||| |||||||||||    
T  15466272 tgaagaaagcaaaatcgtgtcacgatt 15466298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 3 - 102
Target Start/End: Complemental strand, 22291914 - 22291815
Alignment:
Q  3 gagttttaggggttgggttatggagattggtgaagattttctggtttttgggttagggtaggaggggttatgaatttgggtgatgttggtttggatgtat 102  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  22291914 gagttttaggggttgggttatggagattggtaaagattttctggtttttgggttagggtaggaggggttacaaatttgggtgatgttggtttggatgtat 22291815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 105 - 231
Target Start/End: Original strand, 29439599 - 29439723
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagattt 204  Q
    ||||||||| |||||||  || ||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  29439599 atgacagtccgtcattcgttaattttagtgtcattttcatgatgtt--gagttcacaagcaagtttaaacagcaaagaaaacaagaaaaaaagaagattt 29439696  T
Q  205 tgaagaaagcaaaattgtgtcacgatt 231  Q
     |||||||||||||| |||||||||||    
T  29439697 cgaagaaagcaaaatcgtgtcacgatt 29439723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 105 - 265
Target Start/End: Original strand, 16788391 - 16788550
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgata-ttttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagatt 203  Q
    ||||||||||||||||  ||||||||||  || |||  |||||| ||||||||||||||||||| |||| || |||  ||| ||||||||||||||||||    
T  16788391 atgacagtcagtcatttgctatttttagaatctttt--atgataattttgagttcacaagcaagcttaagcaacaagaaaagcaagaaaaatataagatt 16788488  T
Q  204 ttgaagaaagcaaaattgtgtcacgattgttaaaaacgtgtcacgatttagagcacaggatg 265  Q
    |||| ||||||| ||| |||||||||||||| |||||||||||||||||||||| |||||||    
T  16788489 ttgatgaaagcacaatcgtgtcacgattgttgaaaacgtgtcacgatttagagcgcaggatg 16788550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 105 - 266
Target Start/End: Complemental strand, 25140038 - 25139877
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgata-ttttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagatt 203  Q
    |||||||||||||||||   | |||||| ||  |||| |||||| ||||||||||||||| ||| |||||| ||||||||| ||||||||||| ||||||    
T  25140038 atgacagtcagtcattccacaattttagagt-ttttttatgatatttttgagttcacaagtaagcttaaacggcaaagaaagcaagaaaaatagaagatt 25139940  T
Q  204 ttgaagaaagcaaaattgtgtcacgattgttaaaaacgtgtcacgatttagagcacaggatga 266  Q
    | |||||||||||||| |||||||||||||| | ||||||||||||||| ||||||| |||||    
T  25139939 tcgaagaaagcaaaatcgtgtcacgattgttgacaacgtgtcacgatttggagcacaagatga 25139877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 105 - 212
Target Start/End: Original strand, 45456302 - 45456409
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagattt 204  Q
    |||||| |||| |||||  |||||||||||||||||||||||| ||||||||||||||||||| ||||||| |||||||| || |||||||| |||||||    
T  45456302 atgacaatcagccattctttatttttagtgtcattttcatgatgttttgagttcacaagcaagcttaaacaacaaagaaagcatgaaaaatacaagattt 45456401  T
Q  205 tgaagaaa 212  Q
    ||||||||    
T  45456402 tgaagaaa 45456409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 106 - 212
Target Start/End: Complemental strand, 36985732 - 36985626
Alignment:
Q  106 tgacagtcagtcattcactatttttagtgtcattttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagatttt 205  Q
    ||||||||||||||||  |||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||| |||| ||  ||||||| ||||||||    
T  36985732 tgacagtcagtcattcgttatttttagtgtcattttcatgatgttttgagttcacaagcaagcttaaacaacaaggaaagcagaaaaaatagaagatttt 36985633  T
Q  206 gaagaaa 212  Q
    |||||||    
T  36985632 gaagaaa 36985626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 105 - 212
Target Start/End: Original strand, 45453053 - 45453160
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagattt 204  Q
    |||||| ||||||||||  ||||||||| |||||||||||||| ||||||||||||||||||| ||||||| ||| |||| || |||||||| |||||||    
T  45453053 atgacaatcagtcattctttatttttagggtcattttcatgatgttttgagttcacaagcaagcttaaacaacaaggaaagcatgaaaaatacaagattt 45453152  T
Q  205 tgaagaaa 212  Q
    ||||||||    
T  45453153 tgaagaaa 45453160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 22869430 - 22869334
Alignment:
Q  3 gagttttaggggttgggttatggagattggtgaagattttctggtttttgggttagggtaggaggggttatgaatttgggtgatgttggtttggatg 99  Q
    ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| ||     ||||| ||||||||||||||||||||||||||    
T  22869430 gagttttaggggttgggttatggaggttggtgaagagtttctggtttttgggttaggttaatgaaggttacgaatttgggtgatgttggtttggatg 22869334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 20302669 - 20302764
Alignment:
Q  3 gagttttaggggttgggttatggagattggtgaagattttctggtttttgggttagg-gtaggaggggttatgaatttgggtgatgttggtttggatg 99  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||  || || |||||| |||||||||||||||| |||||||||    
T  20302669 gagttttaggggttgggttatggagattggtgaagaatttcaggtttttgggttaggtttaaga-gggttacgaatttgggtgatgtt-gtttggatg 20302764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 23638945 - 23638849
Alignment:
Q  3 gagttttaggggttgggttatggagattggtgaagattttctggtttttgggttagggtaggaggggttatgaatttgggtgatgttggtttggatg 99  Q
    |||||||||| |||||||||||||| |||||||||| |||||||||||||||||||| ||    |||| | ||||| ||||||||||||||||||||    
T  23638945 gagttttaggagttgggttatggaggttggtgaagaatttctggtttttgggttaggttaatgagggtaacgaattagggtgatgttggtttggatg 23638849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 105 - 212
Target Start/End: Original strand, 38014638 - 38014745
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgata-ttttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagatt 203  Q
    ||||||||||||||||  |||||||||| ||| |||| |||||| ||||||||||||||||||| ||||||| ||| |||| || |||||||| ||||||    
T  38014638 atgacagtcagtcatttgctatttttagagtcttttt-atgataattttgagttcacaagcaagcttaaacaacaaggaaagcatgaaaaatacaagatt 38014736  T
Q  204 ttgaagaaa 212  Q
    |||||||||    
T  38014737 ttgaagaaa 38014745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 23161921 - 23162016
Alignment:
Q  3 gagttttaggggttgggttatggagattggtgaagattttctggtttttgggttagg-gtaggaggggttatgaatttgggtgatgttggtttggatg 99  Q
    ||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||||  || || |||||| |||||||||||||||| |||||||||    
T  23161921 gagttgtaggggttgggttatggaggttggtgaagaatttctggtttttgggttaggtttatga-gggttacgaatttgggtgatgtt-gtttggatg 23162016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 23573178 - 23573273
Alignment:
Q  3 gagttttaggggttgggttatggagattggtgaagattttctggtttttgggttagg-gtaggaggggttatgaatttgggtgatgttggtttggatg 99  Q
    ||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||||  || || |||||| |||||||||||||||| |||||||||    
T  23573178 gagttgtaggggttgggttatggaggttggtgaagaatttctggtttttgggttaggtttatga-gggttacgaatttgggtgatgtt-gtttggatg 23573273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 105 - 212
Target Start/End: Complemental strand, 31430636 - 31430529
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgata-ttttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagatt 203  Q
    |||||||| |||||||  |||||||||| ||| |||| |||||| ||||||||||||||||||| ||||||| ||| |||| || |||||||| ||||||    
T  31430636 atgacagttagtcatttgctatttttagagtcttttt-atgataattttgagttcacaagcaagcttaaacaacaaggaaagcatgaaaaatacaagatt 31430538  T
Q  204 ttgaagaaa 212  Q
    |||||||||    
T  31430537 ttgaagaaa 31430529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 105 - 194
Target Start/End: Original strand, 10599953 - 10600042
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatatttt-gagttcacaagcaagtttaaacagcaaagaaaacaagaaaaa 194  Q
    ||||||||||||||||||||||||||||  || |||| |||||||||| ||||||||||||||| |||| ||||||  |||||||||||||    
T  10599953 atgacagtcagtcattcactatttttagaatcttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaaacaagaaaaa 10600042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 24797830 - 24797912
Alignment:
Q  11 ggggttgggttatggagattggtgaagattttctggtttttgggttagggtaggaggggttatgaatttgggtgatgttggtt 93  Q
    |||||||||||| |||| |||||||||| ||| |||||||||||||||| ||||  |||||| |||||||||||||| |||||    
T  24797830 ggggttgggttagggaggttggtgaagaatttatggtttttgggttaggttagggagggttacgaatttgggtgatggtggtt 24797912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 115200 - 115105
Alignment:
Q  3 gagttttaggggttgggttatggagattggtgaagattttctggtttttgggttagg-gtaggaggggttatgaatttgggtgatgttggtttggatg 99  Q
    ||||| ||||||||| |||||||||||||||||| | ||||||||||||||||||||  || || |||||| |||||||||||||||| |||||||||    
T  115200 gagttgtaggggttgagttatggagattggtgaaaaatttctggtttttgggttaggtttatga-gggttacgaatttgggtgatgtt-gtttggatg 115105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 27629175 - 27629080
Alignment:
Q  3 gagttttaggggttgggttatggagattggtgaagattttctggtttttgggttagggtaggaggggttatgaatttgggtgatgttggtttggatg 99  Q
    |||||| ||||||||||||||||||||| ||||| | |||| ||||||||||||||| |    ||||||| |||||||||||||||| |||||||||    
T  27629175 gagtttgaggggttgggttatggagattagtgaaaaatttcaggtttttgggttaggtttatgggggttacgaatttgggtgatgtt-gtttggatg 27629080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 31428404 - 31428340
Alignment:
Q  148 attttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagattttgaagaaa 212  Q
    |||||||||||||||||||||||||||| ||| |||| || |||||||| |||||||||||||||    
T  31428404 attttgagttcacaagcaagtttaaacaacaaggaaagcatgaaaaatacaagattttgaagaaa 31428340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 16773359 - 16773265
Alignment:
Q  3 gagttttaggggttgggttatggagattggtgaagattttctggtttttgggttagg-gtaggaggggttatgaatttgggtgatgttggtttggatg 99  Q
    ||||||||||||||||||||| |||||||||| ||| |||  |||||||||||||||  || || |||||| |||||||||||||||| |||||||||    
T  16773359 gagttttaggggttgggttat-gagattggtggagaattttaggtttttgggttaggtttatga-gggttacgaatttgggtgatgtt-gtttggatg 16773265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 103 - 194
Target Start/End: Original strand, 13136762 - 13136853
Alignment:
Q  103 taatgacagtcagtcattcactatttttagtgtcattttcatgata-ttttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaa 194  Q
    ||||||||||||||||||   ||||||||| |||||||| |||||| |||||||||||||| |||| |||| ||||||  ||| |||||||||    
T  13136762 taatgacagtcagtcatttgttatttttagagtcatttt-atgatatttttgagttcacaaacaagattaagcagcaagaaaagcaagaaaaa 13136853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 105 - 194
Target Start/End: Original strand, 3874484 - 3874573
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgata-ttttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaa 194  Q
    |||||||||||||||||| ||||||||| ||| |||| | |||| |||||||||||||| |||| |||| ||||||  ||| |||||||||    
T  3874484 atgacagtcagtcattcattatttttagagtc-tttttaggatatttttgagttcacaaacaagattaagcagcaagaaaagcaagaaaaa 3874573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 105 - 178
Target Start/End: Original strand, 5665832 - 5665905
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatatttt-gagttcacaagcaagtttaaacagca 178  Q
    |||||||||| |||||| |||||||||| ||| |||| |||||||||| ||||||||||||||| |||| |||||    
T  5665832 atgacagtcaatcattcgctatttttagagtcttttt-atgatatttttgagttcacaagcaagcttaagcagca 5665905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 105 - 179
Target Start/End: Original strand, 43722906 - 43722980
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatatttt-gagttcacaagcaagtttaaacagcaa 179  Q
    |||||||||| ||||||  ||||||||| ||| |||| |||||||||| ||||||||||||||| |||| ||||||    
T  43722906 atgacagtcaatcattcgttatttttagagtcttttt-atgatatttttgagttcacaagcaagattaagcagcaa 43722980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 179
Target Start/End: Original strand, 5104955 - 5105027
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatatttt-gagttcacaagcaagtttaaacagcaa 179  Q
    ||||||||||||||||||||  |||||| ||  |||| |||||||||| ||||||||||||||| |||| ||||||    
T  5104955 atgacagtcagtcattcact--ttttagagttttttt-atgatatttttgagttcacaagcaagattaagcagcaa 5105027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 24822625 - 24822677
Alignment:
Q  3 gagttttaggggttgggttatggagattggtgaagattttctggtttttgggt 55  Q
    ||||||||||||||||||| |||| |||||||| || ||| ||| ||||||||    
T  24822625 gagttttaggggttgggttgtggaaattggtgatgaatttgtgggttttgggt 24822677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 134; Significance: 8e-70; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 105 - 266
Target Start/End: Complemental strand, 33878236 - 33878075
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagattt 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  33878236 atgacagtcagtcattcactatttttagtgtcattttcatgatattttgagttcacaagaaagtttaaacagcaaagaaaacaagaaaaatagaagattt 33878137  T
Q  205 tgaagaaagcaaaattgtgtcacgattgttaaaaacgtgtcacgatttagagcacaggatga 266  Q
    ||||||||||||||| |||||||||||||| |||||||||||| ||||||| ||||| ||||    
T  33878136 tgaagaaagcaaaatcgtgtcacgattgttgaaaacgtgtcacaatttagaacacagaatga 33878075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 105 - 261
Target Start/End: Complemental strand, 18722308 - 18722151
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataaga-tt 203  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||| |||| ||    
T  18722308 atgacagtcagtcattcactgtttttagtgtcattttcatgatattttgagttcacatgcaagcttaaacaacaaagaaaacaagaaaaatagaagattt 18722209  T
Q  204 ttgaagaaagcaaaattgtgtcacgattgttaaaaacgtgtcacgatttagagcacag 261  Q
    |||||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||    
T  18722208 ttgaagaaagcaaaatcgtgtcacgattgttgaaaacgtgtcacgatttggagcacag 18722151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 107 - 266
Target Start/End: Complemental strand, 25595681 - 25595521
Alignment:
Q  107 gacagtcagtcattcactatttttagtgtcattttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataaga-tttt 205  Q
    |||||||||||||||| | |||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||| |||| ||||    
T  25595681 gacagtcagtcattcattgtttttagtgtcattttcatgatattttgagttcacatgcaagcttaaacaacaaagaaaacaagaaaaatagaagattttt 25595582  T
Q  206 gaagaaagcaaaattgtgtcacgattgttaaaaacgtgtcacgatttagagcacaggatga 266  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||| ||||||| |||||    
T  25595581 gaagaaagcaaaatcgtgtcacgattgttgaaaacgtgtcacgatttggagcacatgatga 25595521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 105 - 260
Target Start/End: Original strand, 10663013 - 10663168
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagattt 204  Q
    |||||||||||||||||||||||||||| ||| |||||||||||| |||||||||||||||||| ||||||||||||||| ||||||||||| |||||||    
T  10663013 atgacagtcagtcattcactatttttagagtctttttcatgatatgttgagttcacaagcaagtctaaacagcaaagaaagcaagaaaaatagaagattt 10663112  T
Q  205 tgaagaaagcaaaattgtgtcacgattgttaaaaacgtgtcacgatttagagcaca 260  Q
    ||||||||||||||| |||||||||||||| ||||| ||||| ||||| |||||||    
T  10663113 tgaagaaagcaaaatcgtgtcacgattgttgaaaacatgtcatgatttggagcaca 10663168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 109 - 266
Target Start/End: Complemental strand, 43682792 - 43682634
Alignment:
Q  109 cagtcagtcattcactatttttagtgtcatttt-catgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagattttga 207  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||||||    
T  43682792 cagtcagtcattcactatttttagtatcatttttcatgatattttgagttcataagcaagtttaaacagcaaagaaagcaagaaaaatagaagattttga 43682693  T
Q  208 agaaagcaaaattgtgtcacgattgttaaaaacgtgtcacgatttagagcacaggatga 266  Q
    |||||||||||| ||||||||||| || |||||||||||| |||| || ||||||||||    
T  43682692 agaaagcaaaatcgtgtcacgattattgaaaacgtgtcacaatttggaacacaggatga 43682634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 107 - 266
Target Start/End: Complemental strand, 25592496 - 25592336
Alignment:
Q  107 gacagtcagtcattcactatttttagtgtcattttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataaga-tttt 205  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||| |||| ||||    
T  25592496 gacagtcagtcattcactgtttttagtgtcattttcatgatattttgagttcacatgcaagcttaaacaacaaagaaaacaagaaaaatagaagattttt 25592397  T
Q  206 gaagaaagcaaaattgtgtcacgattgttaaaaacgtgtcacgatttagagcacaggatga 266  Q
    |||||||||||||| |||||||||||||| |||| ||||| |||||| ||||||| |||||    
T  25592396 gaagaaagcaaaatcgtgtcacgattgttgaaaatgtgtcccgatttggagcacatgatga 25592336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 6 - 102
Target Start/End: Complemental strand, 21825077 - 21824981
Alignment:
Q  6 ttttaggggttgggttatggagattggtgaagattttctggtttttgggttagggtaggaggggttatgaatttgggtgatgttggtttggatgtat 102  Q
    |||||||||||||||||||||  || ||||||| ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||    
T  21825077 ttttaggggttgggttatggaagttagtgaagaatttctggtttttgggttagggtatgaggggttacgaatttgggtgatgttggtttggatgtat 21824981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 7 - 99
Target Start/End: Original strand, 22036038 - 22036130
Alignment:
Q  7 tttaggggttgggttatggagattggtgaagattttctggtttttgggttagggtaggaggggttatgaatttgggtgatgttggtttggatg 99  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||| ||||||||||||||||| ||||||||    
T  22036038 tttaggggttgggttatggagattggggaagaatttctggtttttgggttaggttaggaggggttacgaatttgggtgatgttgatttggatg 22036130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 105 - 185
Target Start/End: Original strand, 23612571 - 23612651
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaa 185  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  23612571 atgacagtcagtcattcactatttttagtgtcattttgatgagattttgagttcacaagcaagtttaaacagcaaagaaaa 23612651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 100 - 266
Target Start/End: Original strand, 14420861 - 14421027
Alignment:
Q  100 tattaatgacagtcagtcattcactatttttagtgtcattttcatgatattttg-agttcacaagcaagtttaaacagcaaagaaaacaagaaaaatata 198  Q
    |||| |||||||||  ||||||   |||||||| ||| |||| ||||||||||  |||||||||||||| |||| || |||  ||| |||||||||||||    
T  14420861 tattgatgacagtctctcattccacatttttagagtcttttt-atgatattttttagttcacaagcaagcttaagcaacaagaaaagcaagaaaaatata 14420959  T
Q  199 agattttgaagaaagcaaaattgtgtcacgattgttaaaaacgtgtcacgatttagagcacaggatga 266  Q
    ||||||||||||||||||||| || ||||||||||| ||||||||||||||||| || ||||||||||    
T  14420960 agattttgaagaaagcaaaatcgtatcacgattgttgaaaacgtgtcacgatttggaacacaggatga 14421027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 124 - 266
Target Start/End: Complemental strand, 45156897 - 45156755
Alignment:
Q  124 tatttttagtgtcattttcatgatatttt-gagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagattttgaagaaagcaaaattgt 222  Q
    ||||||||| ||| |||| |||||||||| ||||||||||||||| || | ||||||  ||| ||||||||||| |||||||||||||||||| ||| ||    
T  45156897 tatttttagagtcttttt-atgatatttttgagttcacaagcaagctttagcagcaagaaaagcaagaaaaatagaagattttgaagaaagcacaatcgt 45156799  T
Q  223 gtcacgattgttaaaaacgtgtcacgatttagagcacaggatga 266  Q
    |||||||||||| |||| |||||||||||| |||||||||||||    
T  45156798 gtcacgattgttgaaaatgtgtcacgatttggagcacaggatga 45156755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 19904200 - 19904104
Alignment:
Q  3 gagttttaggggttgggttatggagattggtgaagattttctggtttttgggttagggtaggaggggttatgaatttgggtgatgttggtttggatg 99  Q
    |||||||||||||||||||| |||| |||||||||| |||||||||||||||||||| ||||| |||||||||||||||| ||||||| ||||||||    
T  19904200 gagttttaggggttgggttagggaggttggtgaagaatttctggtttttgggttaggttaggaagggttatgaatttgggggatgttgttttggatg 19904104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 105 - 212
Target Start/End: Complemental strand, 14589814 - 14589707
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagattt 204  Q
    |||| ||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||| ||| ||| ||| |||| || |||||||| |||||||    
T  14589814 atgatagttagtcattcattatttttagtgtcattttcatgatgttttgagttcacaagcaagcttacacaacaaggaaagcatgaaaaatacaagattt 14589715  T
Q  205 tgaagaaa 212  Q
    ||||||||    
T  14589714 tgaagaaa 14589707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 125 - 266
Target Start/End: Complemental strand, 5540973 - 5540832
Alignment:
Q  125 atttttagtgtcattttcatgatatttt-gagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagattttgaagaaagcaaaattgtg 223  Q
    |||||||| ||| |||| |||||||||| |||||||||||||||  ||| ||||||   ||  |||||||||| |||||||||||| |||||||||  ||    
T  5540973 atttttagagtcttttt-atgatatttttgagttcacaagcaagcataagcagcaagacaagtaagaaaaatagaagattttgaaggaagcaaaatcatg 5540875  T
Q  224 tcacgattgttaaaaacgtgtcacgatttagagcacaggatga 266  Q
    ||||||||||| |||||||||||||||||  ||||||||||||    
T  5540874 tcacgattgttgaaaacgtgtcacgatttgaagcacaggatga 5540832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 105 - 212
Target Start/End: Complemental strand, 22174889 - 22174782
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatatttt-gagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagatt 203  Q
    ||||||||||| |||||| |||||| ||||||||||||||||| |||| ||||||||||||||| ||||||| ||| |||| || |||||||| ||||||    
T  22174889 atgacagtcagccattcattatttt-agtgtcattttcatgatgtttttgagttcacaagcaagcttaaacaacaaggaaagcatgaaaaatacaagatt 22174791  T
Q  204 ttgaagaaa 212  Q
    |||||||||    
T  22174790 ttgaagaaa 22174782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 149 - 266
Target Start/End: Original strand, 25228060 - 25228175
Alignment:
Q  149 ttttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagattttgaagaaagcaaaattgtgtcacgattgttaaaaacgtgtcacg 248  Q
    ||||||||||||||||||| | ||  |||||  ||||||||||||||| |||||||||||||||  ||||| ||||| |||||| | |||||||||||||    
T  25228060 ttttgagttcacaagcaagctcaagaagcaagaaaaacaagaaaaatagaagattttgaagaaa--aaaatcgtgtctcgattgctgaaaacgtgtcacg 25228157  T
Q  249 atttagagcacaggatga 266  Q
    |||| ||||||| |||||    
T  25228158 atttggagcacatgatga 25228175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 100 - 212
Target Start/End: Complemental strand, 18826837 - 18826725
Alignment:
Q  100 tattaatgacagtcagtcattcactatttttagtgtcattttcatgata-ttttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatata 198  Q
    |||| ||||||||||||||||  |||||||||| ||| |||| |||||| ||||||||||||||||||  ||||||| ||| |||| || |||||||| |    
T  18826837 tattgatgacagtcagtcatttgctatttttagagtcttttt-atgataattttgagttcacaagcaaacttaaacaacaaggaaagcatgaaaaataca 18826739  T
Q  199 agattttgaagaaa 212  Q
    ||||||||||||||    
T  18826738 agattttgaagaaa 18826725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 140 - 213
Target Start/End: Complemental strand, 38249321 - 38249248
Alignment:
Q  140 ttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagattttgaagaaag 213  Q
    |||||||| |||||| |||||||||||| ||||||||||| ||||||| ||||| |  ||||||||||||||||    
T  38249321 ttcatgatcttttgaattcacaagcaagcttaaacagcaaggaaaacatgaaaagttaaagattttgaagaaag 38249248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 105 - 166
Target Start/End: Original strand, 19792928 - 19792990
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgata-ttttgagttcacaagcaa 166  Q
    ||||||||| | |||||||||||||||| ||| |||| |||||| ||||||||||||||||||    
T  19792928 atgacagtcggccattcactatttttagagtcttttttatgatatttttgagttcacaagcaa 19792990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 194
Target Start/End: Original strand, 12582231 - 12582309
Alignment:
Q  116 tcattcactatttttagtgtcattttcatgatatttt-gagttcacaagcaagtttaaacagcaaagaaaa-caagaaaaa 194  Q
    |||||| |||||||||| ||| |||| |||||||||| ||||||||||||||| |||| ||| |||||||| |||||||||    
T  12582231 tcattcgctatttttagagtcttttt-atgatatttttgagttcacaagcaagattaagcag-aaagaaaagcaagaaaaa 12582309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 18402972 - 18402876
Alignment:
Q  3 gagttttaggggttgggttatggagattggtgaagattttctggtttttgggttagggtaggaggggttatgaatttgggtgatgttggtttggatg 99  Q
    |||||||| | |||||| | ||||  ||||||| || ||| |||||||||||||||| ||   ||||||| |||||||| |||| ||| ||||||||    
T  18402972 gagttttaagagttggggtgtggaatttggtgatgaatttgtggtttttgggttaggttaatgggggttacgaatttggttgattttgatttggatg 18402876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 29329882 - 29329830
Alignment:
Q  3 gagttttaggggttgggttatggagattggtgaagattttctggtttttgggt 55  Q
    ||||||||||||||||||| |||| |||||||| || ||||| | ||||||||    
T  29329882 gagttttaggggttgggttgtggaaattggtgatgaatttcttggttttgggt 29329830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 179
Target Start/End: Original strand, 30640507 - 30640583
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttc-atgata-ttttgagttcacaagcaagtttaaacagcaa 179  Q
    |||||||||| |||||||||||||| ||  || ||||  |||||| ||||||||||||||||||| |||| ||||||    
T  30640507 atgacagtcaatcattcactattttaagaatctttttttatgatacttttgagttcacaagcaagcttaagcagcaa 30640583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 130; Significance: 2e-67; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 105 - 266
Target Start/End: Original strand, 9716953 - 9717114
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagattt 204  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  9716953 atgacagtcggtcattcactatttttagtgtcattttcatgatattttgagttcacaagcaagtttaaacaacaaagaaaacaagaaaaatagaagattt 9717052  T
Q  205 tgaagaaagcaaaattgtgtcacgattgttaaaaacgtgtcacgatttagagcacaggatga 266  Q
     |||||||||||||| |||||||||||||| |||||||| ||| ||||||||||||||||||    
T  9717053 cgaagaaagcaaaatcgtgtcacgattgttgaaaacgtggcacaatttagagcacaggatga 9717114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 105 - 266
Target Start/End: Original strand, 15431166 - 15431327
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagattt 204  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  15431166 atgacagtcagtcattcactatttttagagtctttttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagagaaatagaagattt 15431265  T
Q  205 tgaagaaagcaaaattgtgtcacgattgttaaaaacgtgtcacgatttagagcacaggatga 266  Q
    ||||||||||||||| |||||||||||||  ||||||||||||||||| |||||||||||||    
T  15431266 tgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcacaggatga 15431327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 105 - 266
Target Start/End: Original strand, 15437780 - 15437941
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagattt 204  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  15437780 atgacagtcagtcattcactatttttagagtctttttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagagaaatagaagattt 15437879  T
Q  205 tgaagaaagcaaaattgtgtcacgattgttaaaaacgtgtcacgatttagagcacaggatga 266  Q
    ||||||||||||||| |||||||||||||  ||||||||||||||||| |||||||||||||    
T  15437880 tgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcacaggatga 15437941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 105 - 266
Target Start/End: Original strand, 18910606 - 18910767
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagattt 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| |||||||| ||||||||||| |||||||    
T  18910606 atgacagtcagtcattcactatttttagtgtcattttcatgatattttgagttcacaagcaaacttaaacaacaaagaaagcaagaaaaatagaagattt 18910705  T
Q  205 tgaagaaagcaaaattgtgtcacgattgttaaaaacgtgtcacgatttagagcacaggatga 266  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| |||||    
T  18910706 tgaagaaagcaaaatcgtgtcacgattgttgaaaacgtgtcacgatttagagcacatgatga 18910767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 105 - 252
Target Start/End: Original strand, 5669630 - 5669777
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagattt 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  5669630 atgacagtcagtcattcactatttttagtgtcattttcatgatattttgagttcacaagcaagtttaaacaacaaagaaaacaagaaaaatagaagattt 5669729  T
Q  205 tgaagaaagcaaaattgtgtcacgattgttaaaaacgtgtcacgattt 252  Q
    ||||||||||||||| |||||||||||||| |||||||||||| ||||    
T  5669730 tgaagaaagcaaaatcgtgtcacgattgttgaaaacgtgtcacaattt 5669777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 105 - 252
Target Start/End: Complemental strand, 33410960 - 33410813
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagattt 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  33410960 atgacagtcagtcattcactatttttagtgtcattttcatgatattttgagttcacaagcaagtttaaacaacaaagaaaacaagaaaaatagaagattt 33410861  T
Q  205 tgaagaaagcaaaattgtgtcacgattgttaaaaacgtgtcacgattt 252  Q
    ||||||||||||||| |||||||||||||| ||||||||| |||||||    
T  33410860 tgaagaaagcaaaatcgtgtcacgattgttgaaaacgtgttacgattt 33410813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 105 - 266
Target Start/End: Complemental strand, 3798794 - 3798633
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagattt 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  3798794 atgacagtcagtcattcactatttttagtgtcattttcatgatattttgagttcacaagcaagtttaaacagcaaagaaagcaagaaaaatagaagattt 3798695  T
Q  205 tgaagaaagcaaaattgtgtcacgattgttaaaaacgtgtcacgatttagagcacaggatga 266  Q
    |||||||||||||||  ||||||||||||| |||| |||||||||||| || || |||||||    
T  3798694 tgaagaaagcaaaatcttgtcacgattgttgaaaatgtgtcacgatttggaacaaaggatga 3798633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 113 - 266
Target Start/End: Complemental strand, 19861277 - 19861124
Alignment:
Q  113 cagtcattcactatttttagtgtcattttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagattttgaagaaa 212  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||     
T  19861277 cagtcattcactgtttttagtgtcattttcatgatattttgagttcacaagcaagcttaaacagcaaagaaagcaagaaaaatataagattttgaagaac 19861178  T
Q  213 gcaaaattgtgtcacgattgttaaaaacgtgtcacgatttagagcacaggatga 266  Q
     ||||||||||||||||||||| ||||||| ||||||||| |||||||||||||    
T  19861177 acaaaattgtgtcacgattgttgaaaacgtatcacgatttggagcacaggatga 19861124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 105 - 266
Target Start/End: Complemental strand, 5721969 - 5721808
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagattt 204  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||  ||||||||| |||| |||||||||||||||||||||||||||| |||||||    
T  5721969 atgacaatcagtcattcactgtttttagtgtcattttcatgatatttcaagttcacaaacaagcttaaacagcaaagaaaacaagaaaaatagaagattt 5721870  T
Q  205 tgaagaaagcaaaattgtgtcacgattgttaaaaacgtgtcacgatttagagcacaggatga 266  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||  ||||||||||||    
T  5721869 tgaagaaagcaaaatcgtgtcacgattgttgaaaacgtgtcacgatttgaagcacaggatga 5721808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 105 - 266
Target Start/End: Complemental strand, 19865641 - 19865480
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagattt 204  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||||| |||||||    
T  19865641 atgacagtcagtcattcactgtttttagtgtcattttcatgatattttgagttcacaagcaagcttaaacaacaaagaaagcaagaaaaatagaagattt 19865542  T
Q  205 tgaagaaagcaaaattgtgtcacgattgttaaaaacgtgtcacgatttagagcacaggatga 266  Q
    |||||||| |||||| ||||||||||| || |||| || ||||||||| |||||||||||||    
T  19865541 tgaagaaaacaaaatcgtgtcacgattattgaaaatgtatcacgatttggagcacaggatga 19865480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 105 - 231
Target Start/End: Complemental strand, 37104239 - 37104113
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagattt 204  Q
    |||||| ||||||||||||| | |||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  37104239 atgacactcagtcattcactgtgtttagtatcattttcatgatattttgagttcacaagcaagcttaaacagcaaagaaaacaagaaaaatagaagattt 37104140  T
Q  205 tgaagaaagcaaaattgtgtcacgatt 231  Q
    ||||||||||||||| |||||||||||    
T  37104139 tgaagaaagcaaaatcgtgtcacgatt 37104113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 105 - 266
Target Start/End: Original strand, 12237356 - 12237517
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagattt 204  Q
    |||| ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||| ||||| |||||||    
T  12237356 atgatagtcattcattcactgtttttagtgtcattttcatgatattttgagttcacaagcaagcttaaacaacaaagaaagcaagagaaatagaagattt 12237455  T
Q  205 tgaagaaagcaaaattgtgtcacgattgttaaaaacgtgtcacgatttagagcacaggatga 266  Q
    ||||||||||||||| |||||||||||||  |||| ||||||| ||||| |  |||||||||    
T  12237456 tgaagaaagcaaaatcgtgtcacgattgtcgaaaatgtgtcacaatttaaaatacaggatga 12237517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 105 - 211
Target Start/End: Original strand, 56198031 - 56198137
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagattt 204  Q
    |||||||||||||||||  |||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||| |||| || |||||||| |||||||    
T  56198031 atgacagtcagtcattcgttatttttagtgtcattttcatgatgttttgagttcacaagcaagcttaaacaacaaggaaagcatgaaaaatagaagattt 56198130  T
Q  205 tgaagaa 211  Q
    |||||||    
T  56198131 tgaagaa 56198137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 105 - 212
Target Start/End: Original strand, 47114778 - 47114885
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagattt 204  Q
    |||||||||||||||||  ||||||||||||||||||||| || ||||||||||||||||||| |||||||  || ||||||| |||||||| |||||||    
T  47114778 atgacagtcagtcattctttatttttagtgtcattttcattatgttttgagttcacaagcaagcttaaacaataaggaaaacatgaaaaatacaagattt 47114877  T
Q  205 tgaagaaa 212  Q
    ||||||||    
T  47114878 tgaagaaa 47114885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 105 - 212
Target Start/End: Original strand, 56194724 - 56194831
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagattt 204  Q
    |||||||||| ||||||  |||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||| |||| || |||||||| |||||||    
T  56194724 atgacagtcaatcattcgttatttttagtgtcattttcatgatgttttgagttcacaagcaagcttaaacaacaaggaaagcatgaaaaatagaagattt 56194823  T
Q  205 tgaagaaa 212  Q
    ||||||||    
T  56194824 tgaagaaa 56194831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 140 - 266
Target Start/End: Original strand, 53093758 - 53093884
Alignment:
Q  140 ttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagattttgaagaaagcaaaattgtgtcacgattgttaaaaa 239  Q
    |||||| | ||||||||||||||||||| ||||||||||| |||| || ||||| |  |||||||||||||||| ||||| ||| |||||||||| ||||    
T  53093758 ttcatggtcttttgagttcacaagcaagcttaaacagcaaggaaagcatgaaaagttgaagattttgaagaaagtaaaatcgtgacacgattgttgaaaa 53093857  T
Q  240 cgtgtcacgatttagagcacaggatga 266  Q
    |||||||||| || |||||||||||||    
T  53093858 cgtgtcacgaattggagcacaggatga 53093884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 153 - 266
Target Start/End: Complemental strand, 40617762 - 40617649
Alignment:
Q  153 gagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagattttgaagaaagcaaaattgtgtcacgattgttaaaaacgtgtcacgattt 252  Q
    ||||||||||||||| |||| ||||||  ||| ||||||||||| |||||||||||||| ||||||| ||| |||||||||| |||||||||||||||||    
T  40617762 gagttcacaagcaagcttaagcagcaagaaaagcaagaaaaatagaagattttgaagaaggcaaaatcgtgccacgattgttgaaaacgtgtcacgattt 40617663  T
Q  253 agagcacaggatga 266  Q
    ||| |||| |||||    
T  40617662 agaacacaagatga 40617649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 105 - 252
Target Start/End: Original strand, 49269737 - 49269884
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatatttt-gagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagatt 203  Q
    ||||||||||||||||    |||||||| ||  |||| |||||||||| |||||  ||| |||| |||||| ||||||||| ||||||||||| ||||||    
T  49269737 atgacagtcagtcattttacatttttagagttttttt-atgatatttttgagttagcaaacaagcttaaacggcaaagaaagcaagaaaaatagaagatt 49269835  T
Q  204 ttgaagaaagcaaaattgtgtcacgattgttaaaaacgtgtcacgattt 252  Q
    |||||||||||||||| || ||||||||||| |||||||||||||||||    
T  49269836 ttgaagaaagcaaaatcgtatcacgattgttgaaaacgtgtcacgattt 49269884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 125 - 258
Target Start/End: Original strand, 5680491 - 5680624
Alignment:
Q  125 atttttagtgtcattttcatgatatttt-gagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagattttgaagaaagcaaaattgtg 223  Q
    |||||||| ||| |||| |||||||||| ||||||| ||||||| ||||||| |||  ||| ||||||||||| ||||||||||| ||||||||||  ||    
T  5680491 atttttagagtcttttt-atgatatttttgagttcataagcaagcttaaacaacaagaaaagcaagaaaaatagaagattttgaaaaaagcaaaatcatg 5680589  T
Q  224 tcacgattgttaaaaacgtgtcacgatttagagca 258  Q
    ||||||||||| |||||||||||| ||||||||||    
T  5680590 tcacgattgttgaaaacgtgtcacaatttagagca 5680624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 105 - 208
Target Start/End: Complemental strand, 15405896 - 15405793
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagattt 204  Q
    |||| ||||||||||||  |||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||| |||  || |||||||| |||||||    
T  15405896 atgaaagtcagtcattctttatttttagtgtcattttcatgatgttttgagttcacaagcaagcttaaacaacaaggaacgcatgaaaaatacaagattt 15405797  T
Q  205 tgaa 208  Q
    ||||    
T  15405796 tgaa 15405793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 15262599 - 15262694
Alignment:
Q  3 gagttttaggggttgggttatggagattggtgaagattttctggtttttgggttagg-gtaggaggggttatgaatttgggtgatgttggtttggatg 99  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  || || |||||| |||||||||||||||| |||||||||    
T  15262599 gagttttaggggttgggttatggagattggtgaagaatttctggtttttgggttaggtttatga-gggttacgaatttgggtgatgtt-gtttggatg 15262694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 16680076 - 16679980
Alignment:
Q  3 gagttttaggggttgggttatggagattggtgaagattttctggtttttgggttagggtaggaggggttatgaatttgggtgatgttggtttggatg 99  Q
    |||||||||||||| ||||| |||| |||||||||| |||||||||||||||||||| ||    |||||| ||||||||||||||||||||||||||    
T  16680076 gagttttaggggtttggttaaggaggttggtgaagaatttctggtttttgggttaggttaatgagggttacgaatttgggtgatgttggtttggatg 16679980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 105 - 212
Target Start/End: Original strand, 33926123 - 33926230
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagattt 204  Q
    ||||||||||||||||   || |||||||||||||| |||||| | ||||||||||||||||| ||||||| ||| |||| || |||||||| |||||||    
T  33926123 atgacagtcagtcatttgttacttttagtgtcatttgcatgatgtcttgagttcacaagcaagcttaaacaacaaggaaagcatgaaaaatacaagattt 33926222  T
Q  205 tgaagaaa 212  Q
    ||||||||    
T  33926223 tgaagaaa 33926230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 93
Target Start/End: Complemental strand, 13820587 - 13820497
Alignment:
Q  3 gagttttaggggttgggttatggagattggtgaagattttctggtttttgggttagggtaggaggggttatgaatttgggtgatgttggtt 93  Q
    ||||||| |||||||||||| |||| |||||||||| ||| |||||||||||||||| ||||  |||||| ||||||||||||||||||||    
T  13820587 gagtttttggggttgggttagggaggttggtgaagaatttatggtttttgggttaggttagggagggttacgaatttgggtgatgttggtt 13820497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 100 - 212
Target Start/End: Complemental strand, 44809907 - 44809795
Alignment:
Q  100 tattaatgacagtcagtcattcactatttttagtgtcattttcatgata-ttttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatata 198  Q
    |||| ||||||||||||||||  |||||||||| ||| |||| |||||| ||||||||||||||||||| ||||||| ||| |||| || |||||||| |    
T  44809907 tattgatgacagtcagtcatttgctatttttagagtcttttt-atgataattttgagttcacaagcaagcttaaacaacaaggaaagcatgaaaaataca 44809809  T
Q  199 agattttgaagaaa 212  Q
    ||||||||||||||    
T  44809808 agattttgaagaaa 44809795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 105 - 212
Target Start/End: Original strand, 29323981 - 29324088
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgata-ttttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagatt 203  Q
    ||||||||||||||||  |||||||||| ||| |||| |||||| ||||||||||||||||||| ||||||| ||| |||| || |||||||| ||||||    
T  29323981 atgacagtcagtcatttgctatttttagagtcttttt-atgataattttgagttcacaagcaagcttaaacaacaaggaaagcatgaaaaatacaagatt 29324079  T
Q  204 ttgaagaaa 212  Q
    |||||||||    
T  29324080 ttgaagaaa 29324088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 125 - 219
Target Start/End: Original strand, 14571048 - 14571142
Alignment:
Q  125 atttttagtgtcattttcatgatatttt-gagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagattttgaagaaagcaaaat 219  Q
    |||||||| ||| |||| |||||||||| ||||||||||||||| |||| ||||||  ||| ||||||||||| ||||||||||||||||||||||    
T  14571048 atttttagagtcttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaagcaagaaaaatagaagattttgaagaaagcaaaat 14571142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 144 - 212
Target Start/End: Complemental strand, 15813041 - 15812973
Alignment:
Q  144 tgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagattttgaagaaa 212  Q
    |||| ||||||||||||||||||||||||||| ||| |||| || |||||||| |||||||||||||||    
T  15813041 tgatgttttgagttcacaagcaagtttaaacaacaaggaaagcatgaaaaatacaagattttgaagaaa 15812973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 105 - 179
Target Start/End: Original strand, 44164003 - 44164078
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgata-ttttgagttcacaagcaagtttaaacagcaa 179  Q
    |||||||||||||||||||||||||||  ||| |||| |||||| ||||||||||||||||||| |||| ||||||    
T  44164003 atgacagtcagtcattcactatttttaaagtcttttttatgatatttttgagttcacaagcaagattaagcagcaa 44164078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 105 - 194
Target Start/End: Original strand, 12782108 - 12782197
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgata-ttttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaa 194  Q
    ||||||||||||||||| |||||||||| |||||||| |||||| ||||||||| ||||||||| |||| ||||||  ||| |||||||||    
T  12782108 atgacagtcagtcattcgctatttttagagtcatttt-atgatatttttgagtttacaagcaagcttaagcagcaagaaaagcaagaaaaa 12782197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 108 - 209
Target Start/End: Complemental strand, 34320839 - 34320738
Alignment:
Q  108 acagtcagtcattcactatttttagtgtcattttcatgata-ttttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagattttg 206  Q
    |||||||||||||  |||||||||| ||| |||| |||||| ||||||||||||||||||| |||||||  || |||| || |||||||| |||||||||    
T  34320839 acagtcagtcatttgctatttttagagtcttttt-atgataattttgagttcacaagcaagcttaaacaataaggaaagcatgaaaaatacaagattttg 34320741  T
Q  207 aag 209  Q
    |||    
T  34320740 aag 34320738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 194
Target Start/End: Original strand, 21418987 - 21419070
Alignment:
Q  111 gtcagtcattcactatttttagtgtcattttcatgatatttt-gagttcacaagcaagtttaaacagcaaagaaaacaagaaaaa 194  Q
    ||||||||||| |||||||||||||| |||| |||||||||| ||||||||||||||| |||| ||||||  ||| |||||||||    
T  21418987 gtcagtcattcgctatttttagtgtcttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaagcaagaaaaa 21419070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 105 - 179
Target Start/End: Complemental strand, 27677964 - 27677889
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgata-ttttgagttcacaagcaagtttaaacagcaa 179  Q
    |||||||||||| ||||||||||||||| ||| |||| |||||| |||||||||||||| |||| |||| ||||||    
T  27677964 atgacagtcagttattcactatttttagagtcttttttatgatatttttgagttcacaatcaagattaagcagcaa 27677889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 105 - 194
Target Start/End: Original strand, 3718338 - 3718427
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgata-ttttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaa 194  Q
    |||||||||| ||||||||||||||||| || ||||| |||||| ||||||||||||||||||| |||| || |||  ||| |||||||||    
T  3718338 atgacagtcactcattcactatttttagagt-atttttatgatatttttgagttcacaagcaagcttaagcaacaagaaaagcaagaaaaa 3718427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 105 - 194
Target Start/End: Complemental strand, 15430764 - 15430674
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatatttt-gagttcacaagcaagtttaaacagcaaagaaaacaagaaaaa 194  Q
    |||||||||||||||||  |||||| || ||| |||| |||||||||| ||||||||||||||| |||| ||||||  ||| |||||||||    
T  15430764 atgacagtcagtcattcgttattttcagagtcttttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaagcaagaaaaa 15430674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 105 - 194
Target Start/End: Complemental strand, 15437378 - 15437288
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatatttt-gagttcacaagcaagtttaaacagcaaagaaaacaagaaaaa 194  Q
    |||||||||||||||||  |||||| || ||| |||| |||||||||| ||||||||||||||| |||| ||||||  ||| |||||||||    
T  15437378 atgacagtcagtcattcgttattttcagagtcttttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaagcaagaaaaa 15437288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 105 - 194
Target Start/End: Original strand, 27013231 - 27013321
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgata-ttttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaa 194  Q
    ||||||||||||||||| |||||||||| ||| |||| |||||| ||||||||||||| ||||| |||| || |||  ||| |||||||||    
T  27013231 atgacagtcagtcattcgctatttttagagtcttttttatgatatttttgagttcacaggcaagcttaagcaacaagaaaagcaagaaaaa 27013321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 194
Target Start/End: Complemental strand, 37741525 - 37741471
Alignment:
Q  140 ttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaa 194  Q
    |||||||||||| ||||||||||||||| |||||||||||  |||||||||||||    
T  37741525 ttcatgatatttggagttcacaagcaagcttaaacagcaagaaaaacaagaaaaa 37741471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 111 - 194
Target Start/End: Original strand, 40794200 - 40794283
Alignment:
Q  111 gtcagtcattcactatttttagtgtcattttcatgatatttt-gagttcacaagcaagtttaaacagcaaagaaaacaagaaaaa 194  Q
    ||||||||||| |||||||||| ||| |||| |||||||||| ||||||||||||||| |||| ||||||  ||| |||||||||    
T  40794200 gtcagtcattcgctatttttagagtcttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaagcaagaaaaa 40794283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 105 - 179
Target Start/End: Complemental strand, 52007429 - 52007355
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatatt-ttgagttcacaagcaagtttaaacagcaa 179  Q
    ||||||||||||||||| |||||||||| ||| |||| |||||||| ||||||||| ||||||| |||| ||||||    
T  52007429 atgacagtcagtcattcgctatttttagagtc-tttttatgatattgttgagttcaaaagcaagcttaagcagcaa 52007355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 105 - 194
Target Start/End: Complemental strand, 27692023 - 27691933
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgata-ttttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaa 194  Q
    |||||| | ||||||||||||||||||| ||| |||| | |||| |||||| |||||||||||| |||| ||||||  ||| |||||||||    
T  27692023 atgacaattagtcattcactatttttagagtcttttttacgatatttttgaattcacaagcaagattaagcagcaagaaaagcaagaaaaa 27691933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 105 - 179
Target Start/End: Complemental strand, 53010456 - 53010382
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgata-ttttgagttcacaagcaagtttaaacagcaa 179  Q
    |||| ||||||||||||| ||||||||| ||| |||| |||||| ||||||||||||||| ||| |||| ||||||    
T  53010456 atgatagtcagtcattcattatttttagagtc-tttttatgatatttttgagttcacaagtaagattaagcagcaa 53010382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 172
Target Start/End: Original strand, 19819952 - 19820020
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgata--ttttgagttcacaagcaagtttaa 172  Q
    ||||||||||||||||| |||||||||  ||| |||| ||||||  ||||||||||||||||||| ||||    
T  19819952 atgacagtcagtcattcgctatttttaaagtc-tttttatgatattttttgagttcacaagcaagattaa 19820020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 4031 - 4127
Alignment:
Q  3 gagttttaggggttgggttatggagattggtgaagattttctggtttttgggttagggtaggaggggttatgaatttgggtgatgttggtttggatg 99  Q
    |||||||| | |||||||| ||||| ||||||| || ||| | | |||||||||||| ||   ||||| | ||||||||||||| || |||||||||    
T  4031 gagttttaagagttgggttgtggagtttggtgatgaatttgttggttttgggttaggttaatgggggtgacgaatttgggtgatttttgtttggatg 4127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 141
Target Start/End: Original strand, 17669449 - 17669485
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcatttt 141  Q
    |||||||||||||||||||||||||||  ||||||||    
T  17669449 atgacagtcagtcattcactatttttaaagtcatttt 17669485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 194
Target Start/End: Original strand, 19826703 - 19826793
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatg--atattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaa 194  Q
    ||||||||||||||||| |||||||||| ||| |||| |||  || ||||||||||||||| ||| |||| || |||  ||| |||||||||    
T  19826703 atgacagtcagtcattcgctatttttagagtc-tttttatgaaattttttgagttcacaagtaagattaagcaacaagaaaagcaagaaaaa 19826793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 130; Significance: 2e-67; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 105 - 266
Target Start/End: Original strand, 538017 - 538178
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagattt 204  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  538017 atgacagtcagtcattcactatttttagagtctttttcatgatattttgagttcacaaacaagtttaaacagcaaagaaaacaagaaaaatagaagattt 538116  T
Q  205 tgaagaaagcaaaattgtgtcacgattgttaaaaacgtgtcacgatttagagcacaggatga 266  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||| |||||||| ||||    
T  538117 tgaagaaagcaaaatcgtgtcacgattgttgaaaacgtgtcacgatttggagcacagaatga 538178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 105 - 266
Target Start/End: Original strand, 6921892 - 6922053
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagattt 204  Q
    |||||||||||||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  6921892 atgacagtcagtcattcactatttttagagcctttttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagagaaatataagattt 6921991  T
Q  205 tgaagaaagcaaaattgtgtcacgattgttaaaaacgtgtcacgatttagagcacaggatga 266  Q
    ||||||||||||||| |||||||||||||  ||||||||||||||||| ||||||| |||||    
T  6921992 tgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcacatgatga 6922053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 105 - 266
Target Start/End: Original strand, 52198307 - 52198468
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagattt 204  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||||| |||||||    
T  52198307 atgacagtcagtcattcactatgtttagtgtcattttcatgatattttgagttcacaagcaagcttaaacaacaaagaaagcaagaaaaatagaagattt 52198406  T
Q  205 tgaagaaagcaaaattgtgtcacgattgttaaaaacgtgtcacgatttagagcacaggatga 266  Q
    |||||||||||||||  ||||||||||||| ||||||||||||||||||||||||| |||||    
T  52198407 tgaagaaagcaaaatcatgtcacgattgttgaaaacgtgtcacgatttagagcacatgatga 52198468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 105 - 266
Target Start/End: Complemental strand, 23299551 - 23299390
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagattt 204  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  23299551 atgacagtcagtcattcactatttttagagtctttttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagagaaatagaagattt 23299452  T
Q  205 tgaagaaagcaaaattgtgtcacgattgttaaaaacgtgtcacgatttagagcacaggatga 266  Q
    ||||||||||||||| |||||||||||||  |||||||||||| |||| ||||||| |||||    
T  23299451 tgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacaatttggagcacaagatga 23299390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 105 - 266
Target Start/End: Complemental strand, 18645739 - 18645578
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagattt 204  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||  ||||||||| |||| |||||||||||||||||||||||||||| |||||||    
T  18645739 atgacaatcagtcattcactgtttttagtgtcattttcatgatatttcaagttcacaaacaagcttaaacagcaaagaaaacaagaaaaatagaagattt 18645640  T
Q  205 tgaagaaagcaaaattgtgtcacgattgttaaaaacgtgtcacgatttagagcacaggatga 266  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||  ||||||||||||    
T  18645639 tgaagaaagcaaaatcgtgtcacgattgttgaaaacgtgtcacgatttgaagcacaggatga 18645578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 105 - 264
Target Start/End: Original strand, 10884020 - 10884179
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagattt 204  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| |||||||    
T  10884020 atgacagtcagtcattcactatttttagagtctttttcatgatattttgagttcacaagcaagtttaaacagcaatgaaaacaaaaaaaatagaagattt 10884119  T
Q  205 tgaagaaagcaaaattgtgtcacgattgttaaaaacgtgtcacgatttagagcacaggat 264  Q
     |||||||||||||| |||||||||||||| ||||| |||||||||||  ||||||||||    
T  10884120 cgaagaaagcaaaatcgtgtcacgattgttgaaaacctgtcacgatttgaagcacaggat 10884179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 105 - 228
Target Start/End: Complemental strand, 10107612 - 10107489
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagattt 204  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  10107612 atgacagtcagtcattcactgtttttagtgtcattttcatgatattttgagttcacaagcaagcttaaacaacaaagaaaacaagaaaaatagaagattt 10107513  T
Q  205 tgaagaaagcaaaattgtgtcacg 228  Q
    ||||||||||||||| ||||||||    
T  10107512 tgaagaaagcaaaatcgtgtcacg 10107489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 105 - 266
Target Start/End: Complemental strand, 16185654 - 16185493
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatatttt-gagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagatt 203  Q
    ||||||||| |||||||   |||||||| ||| |||| |||||||||| |||||||||| |||| |||| ||||||  ||| ||||||||||||||||||    
T  16185654 atgacagtctgtcattccacatttttagagtcttttt-atgatatttttgagttcacaaacaagcttaagcagcaagaaaagcaagaaaaatataagatt 16185556  T
Q  204 ttgaagaaagcaaaattgtgtcacgattgttaaaaacgtgtcacgatttagagcacaggatga 266  Q
    |||||||||||||||| |||||||||||||| ||||| ||||||| |||||||||||||||||    
T  16185555 ttgaagaaagcaaaatcgtgtcacgattgttgaaaacatgtcacgttttagagcacaggatga 16185493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 108 - 207
Target Start/End: Complemental strand, 17532664 - 17532565
Alignment:
Q  108 acagtcagtcattcactatttttagtgtcattttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagattttga 207  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| | ||||||||||    
T  17532664 acagtcagtcattcactgtttttagtgtcattttcatgatattttgagttcacaagcaagcttaaacaacaaagaaaacaagaaaaaaagaagattttga 17532565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 105 - 266
Target Start/End: Original strand, 35411678 - 35411840
Alignment:
Q  105 atgacagtcagtcatt-cactatttttagtgtcattttcatgatatttt-gagttcacaagcaagtttaaacagcaaagaaaac-aagaaaaatataaga 201  Q
    ||||||||| |||||| ||  |||||||| ||| |||| |||||||||| ||||||||||||||  |||| |||| |||||||| |||||||||| ||||    
T  35411678 atgacagtctgtcatttcaacatttttagagtcttttt-atgatatttttgagttcacaagcaaacttaagcagc-aagaaaacaaagaaaaatagaaga 35411775  T
Q  202 ttttgaagaaagcaaaattgtgtcacgattgttaaaaacgtgtcacgatttagagcacaggatga 266  Q
    |||||||||||||||||| |||||||||||||  ||||||||||||||||| || ||||||||||    
T  35411776 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggaacacaggatga 35411840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 12162609 - 12162705
Alignment:
Q  3 gagttttaggggttgggttatggagattggtgaagattttctggtttttgggttagggtaggaggggttatgaatttgggtgatgttggtttggatg 99  Q
    |||||||||| |||||||| ||||| |||||||||| |||||||||||||||||||| ||   ||||| | ||||| ||||||||||||||||||||    
T  12162609 gagttttaggagttgggttgtggaggttggtgaagaatttctggtttttgggttaggttaatgggggtaaagaattagggtgatgttggtttggatg 12162705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 93
Target Start/End: Original strand, 11876847 - 11876937
Alignment:
Q  3 gagttttaggggttgggttatggagattggtgaagattttctggtttttgggttagggtaggaggggttatgaatttgggtgatgttggtt 93  Q
    ||||||| |||||||||||| |||| |||||||||| ||| || ||||||||||||| ||||  |||||| ||||||||||||||||||||    
T  11876847 gagtttttggggttgggttagggaggttggtgaagaatttatgctttttgggttaggttagggagggttacgaatttgggtgatgttggtt 11876937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 105 - 194
Target Start/End: Original strand, 53814973 - 53815062
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatatttt-gagttcacaagcaagtttaaacagcaaagaaaacaagaaaaa 194  Q
    |||||||||||||||||||||||||||| ||| |||| |||||||||| ||||||||||||||| |||| ||||||  |||||||||||||    
T  53814973 atgacagtcagtcattcactatttttagagtcttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaaacaagaaaaa 53815062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 3341738 - 3341833
Alignment:
Q  3 gagttttaggggttgggttatggagattggtgaagattttctggtttttgggttagg-gtaggaggggttatgaatttgggtgatgttggtttggatg 99  Q
    ||||||||||| ||||||||||||||||||| |||| ||||||||||||||||||||  || || |||||| |||||||||||||||| |||||||||    
T  3341738 gagttttagggtttgggttatggagattggttaagaatttctggtttttgggttaggtttatga-gggttacgaatttgggtgatgtt-gtttggatg 3341833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 125 - 260
Target Start/End: Complemental strand, 22994570 - 22994435
Alignment:
Q  125 atttttagtgtcattttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagattttgaagaaagcaaaattgtgt 224  Q
    ||||||||||| || || |||||||||||||| |||||||||| ||||||||||| |||| |||||||||   |||||| ||  |||||  |||| |||     
T  22994570 atttttagtgtaatatt-atgatattttgagtccacaagcaagcttaaacagcaaggaaagcaagaaaaactgaagattgtggtgaaagtgaaatagtga 22994472  T
Q  225 cacgattgtt-aaaaacgtgtcacgatttagagcaca 260  Q
    |||| ||||| |||||||||||||||||| |||||||    
T  22994471 cacggttgttgaaaaacgtgtcacgatttggagcaca 22994435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 105 - 195
Target Start/End: Complemental strand, 29344771 - 29344680
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgata-ttttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaat 195  Q
    |||||||||||||||||||||||||||| ||| || | |||||| ||||||||||||||||||| |||| ||||||  ||| ||||||||||    
T  29344771 atgacagtcagtcattcactatttttagagtctttcttatgatatttttgagttcacaagcaagattaagcagcaagaaaagcaagaaaaat 29344680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 892102 - 892007
Alignment:
Q  3 gagttttaggggttgggttatggagattggtgaagattttctggtttttgggttagg-gtaggaggggttatgaatttgggtgatgttggtttggatg 99  Q
    ||||| ||||||||||||| |||||||||||||||| ||||||||||||||||||||  || || |||||| |||||||| ||||||| |||||||||    
T  892102 gagttgtaggggttgggttgtggagattggtgaagaatttctggtttttgggttaggtttatga-gggttacgaatttggttgatgtt-gtttggatg 892007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 124 - 212
Target Start/End: Complemental strand, 19302343 - 19302255
Alignment:
Q  124 tatttttagtgtcattttcatgatatttt-gagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagattttgaagaaa 212  Q
    ||||||||| ||| |||| |||||||||| ||||||||||||||| ||||||| ||| |||| | ||||||||| |||||||||||||||    
T  19302343 tatttttagagtcttttt-atgatatttttgagttcacaagcaagcttaaacaacaaggaaagcgagaaaaatagaagattttgaagaaa 19302255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 13197901 - 13197997
Alignment:
Q  3 gagttttaggggttgggttatggagattggtgaagattttctggtttttgggttagggtaggaggggttatgaatttgggtgatgttggtttggatg 99  Q
    |||||||| | |||||||| ||||| ||||||| || ||| ||| |||||||||||| ||   ||||||| ||||||||||||| ||||||||||||    
T  13197901 gagttttaagagttgggttgtggagtttggtgatgaatttgtggattttgggttaggttaatgggggttacgaatttgggtgattttggtttggatg 13197997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 215 - 266
Target Start/End: Original strand, 9380143 - 9380194
Alignment:
Q  215 aaaattgtgtcacgattgttaaaaacgtgtcacgatttagagcacaggatga 266  Q
    ||||| |||||||| ||||| |||||||||||||||||||||||||||||||    
T  9380143 aaaatcgtgtcacggttgttgaaaacgtgtcacgatttagagcacaggatga 9380194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 94
Target Start/End: Original strand, 10162725 - 10162816
Alignment:
Q  3 gagttttaggggttgggttatggagattggtgaagattttctggtttttgggttagggtaggaggggttatgaatttgggtgatgttggttt 94  Q
    ||||||| |||||||||||| |||| |||||||| | ||| |||||||||||||||| || |  |||| | |||||||||||||| ||||||    
T  10162725 gagtttttggggttgggttagggaggttggtgaaaaatttatggtttttgggttaggttatggagggtgacgaatttgggtgatggtggttt 10162816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 105 - 194
Target Start/End: Original strand, 16243168 - 16243257
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatatttt-gagttcacaagcaagtttaaacagcaaagaaaacaagaaaaa 194  Q
    |||||| |||||||||| |||||||||| ||| |||| |||||||||| ||||||||||||||| |||| ||||||  ||| |||||||||    
T  16243168 atgacaatcagtcattcgctatttttagagtcttttt-atgatatttttgagttcacaagcaagattaagcagcaagaaaagcaagaaaaa 16243257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 105 - 166
Target Start/End: Original strand, 54460369 - 54460430
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgata-ttttgagttcacaagcaa 166  Q
    |||||||||||||||||||||||||||| ||| |||| |||||| ||||||||||||||||||    
T  54460369 atgacagtcagtcattcactatttttagagtc-tttttatgatatttttgagttcacaagcaa 54460430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 105 - 194
Target Start/End: Original strand, 3839792 - 3839884
Alignment:
Q  105 atgacagtcagtcattcactattttt--agtgtcattttcatgata-ttttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaa 194  Q
    ||||||||||||||||||||||||||  ||| |  |||| |||||| ||||||||||||||||||| |||| ||||||  ||| |||||||||    
T  3839792 atgacagtcagtcattcactatttttagagtttttttttaatgatatttttgagttcacaagcaagcttaagcagcaagaaaagcaagaaaaa 3839884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 105 - 172
Target Start/End: Original strand, 9380013 - 9380080
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgata-ttttgagttcacaagcaagtttaa 172  Q
    ||||||||||||||||| |||||||||| ||| |||| |||||| ||||||||||||||||||| ||||    
T  9380013 atgacagtcagtcattcgctatttttagagtc-tttttatgatatttttgagttcacaagcaagcttaa 9380080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 100 - 179
Target Start/End: Complemental strand, 20729480 - 20729400
Alignment:
Q  100 tattaatgacagtcagtcattcactatttttagtgtcattttcatgata-ttttgagttcacaagcaagtttaaacagcaa 179  Q
    |||| ||||||||||||||||| |||||||||| ||  |||| |||||| |||| |||||||||||||| |||| ||||||    
T  20729480 tattgatgacagtcagtcattcgctatttttagagttttttttatgatattttttagttcacaagcaagcttaagcagcaa 20729400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 187 - 231
Target Start/End: Complemental strand, 55032833 - 55032789
Alignment:
Q  187 aagaaaaatataagattttgaagaaagcaaaattgtgtcacgatt 231  Q
    |||||||||| |||||||||||||||||||||| |||||||||||    
T  55032833 aagaaaaatagaagattttgaagaaagcaaaatcgtgtcacgatt 55032789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 193
Target Start/End: Original strand, 17529546 - 17529585
Alignment:
Q  154 agttcacaagcaagtttaaacagcaaagaaaacaagaaaa 193  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  17529546 agttcacaagcaagcttaaacagcaaagaaaacaagaaaa 17529585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 105 - 179
Target Start/End: Original strand, 41976323 - 41976397
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatatttt-gagttcacaagcaagtttaaacagcaa 179  Q
    ||||||||||||||||| |||||||||| ||  |||| || ||||||| ||||||||||||||| |||||||||||    
T  41976323 atgacagtcagtcattcgctatttttagagtgttttt-ataatatttttgagttcacaagcaagattaaacagcaa 41976397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 13507059 - 13507154
Alignment:
Q  3 gagttttaggggttgggttatggagattggtgaagattttctggtttttgggttagg-gtaggaggggttatgaatttgggtgatgttggtttggatg 99  Q
    |||||||| ||||||||||||||||||||||||| |  ||  ||||||||| |||||  || || |||||| |||||||||||||||| |||||||||    
T  13507059 gagttttacgggttgggttatggagattggtgaaaaaatttaggtttttggcttaggtttatga-gggttacgaatttgggtgatgtt-gtttggatg 13507154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 105 - 193
Target Start/End: Complemental strand, 34984756 - 34984668
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatatttt-gagttcacaagcaagtttaaacagcaaagaaaacaagaaaa 193  Q
    |||||||||||||||||  ||||||||| ||| |||| |||||||||| ||||||||||||||| |||| || |||  ||| ||||||||    
T  34984756 atgacagtcagtcattcgttatttttagagtcttttt-atgatatttttgagttcacaagcaagattaagcaacaagaaaagcaagaaaa 34984668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 12382348 - 12382252
Alignment:
Q  3 gagttttaggggttgggttatggagattggtgaagattttctggtttttgggttagggtaggaggggttatgaatttgggtgatgttggtttggatg 99  Q
    |||||||||| |||||||| ||||| ||||||| || ||| ||| |||||||||||  ||   ||||| | | ||||||||||| ||||||||||||    
T  12382348 gagttttaggagttgggttgtggagtttggtgatgaatttgtgggttttgggttagtttaatgggggtgacggatttgggtgattttggtttggatg 12382252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 15642756 - 15642701
Alignment:
Q  3 gagttttaggggttgggttatggagattggtgaagattttctggtttttgggttagg 59  Q
    ||||||| |||||||||||||| ||||||||||||| |||  |||||||||||||||    
T  15642756 gagttttgggggttgggttatg-agattggtgaagaattttaggtttttgggttagg 15642701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 205
Target Start/End: Complemental strand, 19305501 - 19305445
Alignment:
Q  149 ttttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagatttt 205  Q
    ||||||||||||||||||| ||||||||||| |||| | ||||||||| ||| ||||    
T  19305501 ttttgagttcacaagcaagcttaaacagcaaggaaagcgagaaaaatagaagttttt 19305445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 105 - 179
Target Start/End: Original strand, 10880778 - 10880852
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatatttt-gagttcacaagcaagtttaaacagcaa 179  Q
    |||||||||||| |||  |||||||||| ||| |||| |||||||||| ||||||||||||||| |||| ||||||    
T  10880778 atgacagtcagttatttgctatttttagagtcttttt-atgatatttttgagttcacaagcaagattaagcagcaa 10880852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 172
Target Start/End: Complemental strand, 54736842 - 54736781
Alignment:
Q  111 gtcagtcattcactatttttagtgtcattttcatgata-ttttgagttcacaagcaagtttaa 172  Q
    |||| ||||||||||||||||| ||| |||| |||||| ||||||||||||||||||| ||||    
T  54736842 gtcaatcattcactatttttagagtcttttt-atgatacttttgagttcacaagcaagcttaa 54736781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 109 - 141
Target Start/End: Original strand, 10958777 - 10958809
Alignment:
Q  109 cagtcagtcattcactatttttagtgtcatttt 141  Q
    |||||||||||||||||||||||| ||||||||    
T  10958777 cagtcagtcattcactatttttagagtcatttt 10958809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 109 - 141
Target Start/End: Original strand, 10962434 - 10962466
Alignment:
Q  109 cagtcagtcattcactatttttagtgtcatttt 141  Q
    |||||||||||||||||||||||| ||||||||    
T  10962434 cagtcagtcattcactatttttagagtcatttt 10962466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 109 - 141
Target Start/End: Original strand, 10965943 - 10965975
Alignment:
Q  109 cagtcagtcattcactatttttagtgtcatttt 141  Q
    |||||||||||||||||||||||| ||||||||    
T  10965943 cagtcagtcattcactatttttagagtcatttt 10965975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 125; Significance: 2e-64; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 107 - 266
Target Start/End: Complemental strand, 23389149 - 23388989
Alignment:
Q  107 gacagtcagtcattcactatttttagtgtcattttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataaga-tttt 205  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||| ||||    
T  23389149 gacagtcagtcattcactgtttttagtgtcattttcatgatattttgagttcacatgcaagcttaaacagcaaagaaaacaagaaaaatagaagattttt 23389050  T
Q  206 gaagaaagcaaaattgtgtcacgattgttaaaaacgtgtcacgatttagagcacaggatga 266  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| |||||    
T  23389049 gaagaaagcaaaattgtgtcacgattgttgaaaacgtgtcacgatttggagcacatgatga 23388989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 107 - 266
Target Start/End: Complemental strand, 23379810 - 23379650
Alignment:
Q  107 gacagtcagtcattcactatttttagtgtcattttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataaga-tttt 205  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||| |||| ||||    
T  23379810 gacagtcagtcattcactgtttttagtgtcattttcatgatattttgagttcacatgcaagcttaaacaacaaagaaaacaagaaaaatagaagattttt 23379711  T
Q  206 gaagaaagcaaaattgtgtcacgattgttaaaaacgtgtcacgatttagagcacaggatga 266  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| |||||    
T  23379710 gaagaaagcaaaattgtgtcacgattgttgaaaacgtgtcacgatttggagcacatgatga 23379650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 105 - 266
Target Start/End: Complemental strand, 5739188 - 5739026
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcatttt-catgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagatt 203  Q
    |||||||||||||||||||||||||||| ||  |||| |||||||| |||||||||||||||||| ||||||||||||||| ||||||||||| ||||||    
T  5739188 atgacagtcagtcattcactatttttagagttttttttcatgatatgttgagttcacaagcaagtctaaacagcaaagaaagcaagaaaaatagaagatt 5739089  T
Q  204 ttgaagaaagcaaaattgtgtcacgattgttaaaaacgtgtcacgatttagagcacaggatga 266  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||||| ||||| |||||||    
T  5739088 ttgaagaaagcaaaatcgtgtcacgattgttaaaaacatgtcacgatttggagcaaaggatga 5739026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 105 - 266
Target Start/End: Original strand, 34501418 - 34501577
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagattt 204  Q
    ||||||||| |||||||  || ||||| ||||||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  34501418 atgacagtccgtcattcgttaattttaatgtcattttcatgatgtt--gagttcacaagcaagtttaaacagcaaagaaaacaagaaaaaaagaagattt 34501515  T
Q  205 tgaagaaagcaaaattgtgtcacgattgttaaaaacgtgtcacgatttagagcacaggatga 266  Q
    ||| |||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||    
T  34501516 tgatgaaagcaaaattgtgtcacgattgttgaaaacgtgtcacgatttggagcataggatga 34501577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 105 - 263
Target Start/End: Original strand, 2371415 - 2371573
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagattt 204  Q
    |||| ||| ||| |||||||||||||| |||  |||| ||||||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||||    
T  2371415 atgatagttagttattcactatttttaatgttttttttatgatattttgagttcataagcaagtttaaacagcaaataaaacaagaaaaatagaagattt 2371514  T
Q  205 tgaagaaagcaaaattgtgtcacgattgttaaaaacgtgtcacgatttagagcacagga 263  Q
    ||||||||||||||| || ||||||||||| |||| || ||  ||||||||||||||||    
T  2371515 tgaagaaagcaaaatcgtatcacgattgttgaaaatgtatcgagatttagagcacagga 2371573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 105 - 266
Target Start/End: Original strand, 9953038 - 9953199
Alignment:
Q  105 atgacagtcagtcatt-cactatttttagtgtcattttcatgatatttt-gagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagat 202  Q
    ||||||||| |||||| ||| |||||||| ||| |||| |||||||||| ||||||||||||||| |||| ||||||  ||| ||||||||||| |||||    
T  9953038 atgacagtctgtcatttcac-atttttagagtcttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagat 9953135  T
Q  203 tttgaagaaagcaaaattgtgtcacgattgttaaaaacgtgtcacgatttagagcacaggatga 266  Q
    |||||||||||||||||  ||||||||||||| ||||||||||||||||| |||||||| ||||    
T  9953136 tttgaagaaagcaaaatcatgtcacgattgttgaaaacgtgtcacgatttggagcacagaatga 9953199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 105 - 212
Target Start/End: Original strand, 31071496 - 31071603
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagattt 204  Q
    |||||||||||||||||  |||||||||||||||||||||||| |||||||||||| |||||| ||||||| ||| |||| || |||||||| |||||||    
T  31071496 atgacagtcagtcattctttatttttagtgtcattttcatgatgttttgagttcacgagcaagcttaaacaacaaggaaagcatgaaaaatacaagattt 31071595  T
Q  205 tgaagaaa 212  Q
    ||||||||    
T  31071596 tgaagaaa 31071603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 6 - 99
Target Start/End: Complemental strand, 18427352 - 18427260
Alignment:
Q  6 ttttaggggttgggttatggagattggtgaagattttctggtttttgggttagg-gtaggaggggttatgaatttgggtgatgttggtttggatg 99  Q
    |||||||||||||| |||||||||||||||||| ||||||||||||||||||||  || || |||||| |||||||||||||||| |||||||||    
T  18427352 ttttaggggttgggatatggagattggtgaagaatttctggtttttgggttaggtttatga-gggttacgaatttgggtgatgtt-gtttggatg 18427260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 140 - 210
Target Start/End: Original strand, 6512433 - 6512503
Alignment:
Q  140 ttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagattttgaaga 210  Q
    |||||||| ||||||||||||||||||| ||||||||||| ||||||| ||||| |  |||||||||||||    
T  6512433 ttcatgatcttttgagttcacaagcaagcttaaacagcaaggaaaacatgaaaagttgaagattttgaaga 6512503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 212
Target Start/End: Original strand, 13004433 - 13004509
Alignment:
Q  137 attttcatgatatttt-gagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagattttgaagaaa 212  Q
    ||||| |||||||||| ||||||||||||||| |||| ||||||  ||| ||||||||||| |||||||||||||||    
T  13004433 atttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaagcaagaaaaatagaagattttgaagaaa 13004509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 83
Target Start/End: Complemental strand, 20167910 - 20167830
Alignment:
Q  3 gagttttaggggttgggttatggagattggtgaagattttctggtttttgggttagggtaggaggggttatgaatttgggt 83  Q
    ||||||| ||||||||||||| ||| |||||||| | ||| ||||||||||||||||||| |  |||||| ||||||||||    
T  20167910 gagtttttggggttgggttattgaggttggtgaaaaatttatggtttttgggttagggtatggagggttacgaatttgggt 20167830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 83
Target Start/End: Original strand, 22168092 - 22168172
Alignment:
Q  3 gagttttaggggttgggttatggagattggtgaagattttctggtttttgggttagggtaggaggggttatgaatttgggt 83  Q
    ||||||| ||||||||||||| ||| |||||||| | ||| ||||||||||||||||||| |  |||||| ||||||||||    
T  22168092 gagtttttggggttgggttattgaggttggtgaaaaatttatggtttttgggttagggtatggagggttacgaatttgggt 22168172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 90
Target Start/End: Original strand, 10716071 - 10716158
Alignment:
Q  3 gagttttaggggttgggttatggagattggtgaagattttctggtttttgggttagggtaggaggggttatgaatttgggtgatgttg 90  Q
    ||||||||||||| |||||||||||||||||||| | |||  ||||||||||||||| ||    |||| | |||||||||||||||||    
T  10716071 gagttttaggggtggggttatggagattggtgaaaaattttaggtttttgggttaggttaatgagggtgacgaatttgggtgatgttg 10716158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 93
Target Start/End: Original strand, 22769643 - 22769733
Alignment:
Q  3 gagttttaggggttgggttatggagattggtgaagattttctggtttttgggttagggtaggaggggttatgaatttgggtgatgttggtt 93  Q
    ||||||| | |||||||||| |||| |||||||  | ||| |||||||||||||||| || |  |||||| ||||||||||||||||||||    
T  22769643 gagtttttgaggttgggttagggaggttggtgacaaatttatggtttttgggttaggttatggagggttacgaatttgggtgatgttggtt 22769733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 93
Target Start/End: Complemental strand, 25588326 - 25588236
Alignment:
Q  3 gagttttaggggttgggttatggagattggtgaagattttctggtttttgggttagggtaggaggggttatgaatttgggtgatgttggtt 93  Q
    ||||||| | |||||||||| |||| |||||||  | ||| |||||||||||||||| || |  |||||| ||||||||||||||||||||    
T  25588326 gagtttttgaggttgggttagggaggttggtgacaaatttatggtttttgggttaggttatggagggttacgaatttgggtgatgttggtt 25588236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 20018776 - 20018870
Alignment:
Q  3 gagttttaggggttgggttatggagattggtgaagattttctggtttttgggttagg-gtaggaggggttatgaatttgggtgatgttggtttggatg 99  Q
    ||||||| |||||||||||||| ||||||||||||| |||  |||||||||||||||  || || |||||| |||||||||||||||| |||||||||    
T  20018776 gagttttgggggttgggttatg-agattggtgaagaattttaggtttttgggttaggtttatga-gggttacgaatttgggtgatgtt-gtttggatg 20018870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 105 - 179
Target Start/End: Complemental strand, 28666174 - 28666100
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatatttt-gagttcacaagcaagtttaaacagcaa 179  Q
    |||||||||||||||||  ||||||||| ||| |||| |||||||||| ||||||||||||||| |||| ||||||    
T  28666174 atgacagtcagtcattcgttatttttagagtcttttt-atgatatttttgagttcacaagcaagcttaagcagcaa 28666100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 105 - 194
Target Start/End: Original strand, 10289188 - 10289277
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatatttt-gagttcacaagcaagtttaaacagcaaagaaaacaagaaaaa 194  Q
    |||||||| |||||||| |||||||||| ||| |||| |||||||||| ||||||||||||||| |||| || |||  ||| |||||||||    
T  10289188 atgacagtaagtcattcgctatttttagagtcttttt-atgatatttttgagttcacaagcaagattaagcaacaagaaaagcaagaaaaa 10289277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 11217551 - 11217456
Alignment:
Q  3 gagttttaggggttgggttatggagattggtgaagattttctggtttt-tgggttagggtaggaggggttatgaatttgggtgatgttggtttggatg 99  Q
    |||||||||| |||||||| ||||| ||||||| || ||||||||||| ||||||||| ||   || |||||||||||||||||| || |||||||||    
T  11217551 gagttttaggagttgggttgtggagtttggtgatgaatttctggttttgtgggttaggtta-atggagttatgaatttgggtgat-tttgtttggatg 11217456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 212
Target Start/End: Complemental strand, 28112709 - 28112641
Alignment:
Q  144 tgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagattttgaagaaa 212  Q
    |||| ||||||||||||||||||| ||||| ||||| |||| || ||||| |  |||||||||||||||    
T  28112709 tgatcttttgagttcacaagcaagcttaaaaagcaaggaaagcatgaaaagttgaagattttgaagaaa 28112641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 81
Target Start/End: Original strand, 23520279 - 23520338
Alignment:
Q  22 atggagattggtgaagattttctggtttttgggttagggtaggaggggttatgaatttgg 81  Q
    ||||| ||||||||||| ||| ||||||||||||||||||   |||| ||||||||||||    
T  23520279 atggatattggtgaagaatttatggtttttgggttagggtttaagggattatgaatttgg 23520338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 213
Target Start/End: Complemental strand, 14282445 - 14282373
Alignment:
Q  141 tcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagattttgaagaaag 213  Q
    ||||||| ||||||||| || |||||| | ||||||||| ||||||| ||||| |  || |||||||||||||    
T  14282445 tcatgatcttttgagtttacgagcaagctaaaacagcaaggaaaacatgaaaagttgaaaattttgaagaaag 14282373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 123; Significance: 3e-63; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 114 - 264
Target Start/End: Original strand, 290974 - 291124
Alignment:
Q  114 agtcattcactatttttagtgtcattttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagattttgaagaaag 213  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||||| |||||    
T  290974 agtcattcactatttttagtgtcattttcatgatattttaagttcacaagcaagtttaaacaacaaagaaaacaagaaaaatagaagattttgaggaaag 291073  T
Q  214 caaaattgtgtcacgattgttaaaaacgtgtcacgatttagagcacaggat 264  Q
    |||| |||||||||||||||| ||||||||||||||||| |||||||||||    
T  291074 caaatttgtgtcacgattgttgaaaacgtgtcacgatttggagcacaggat 291124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 125 - 219
Target Start/End: Complemental strand, 246328 - 246234
Alignment:
Q  125 atttttagtgtcattttcatgatatttt-gagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagattttgaagaaagcaaaat 219  Q
    |||||||| ||| |||| |||||||||| ||||||||||||||| |||| ||||||  ||| ||||||||||| ||||||||||||||||||||||    
T  246328 atttttagagtcttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaagcaagaaaaatagaagattttgaagaaagcaaaat 246234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 123; Significance: 3e-63; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 100 - 266
Target Start/End: Complemental strand, 1951348 - 1951182
Alignment:
Q  100 tattaatgacagtcagtcattcactatttttagtgtcattttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataa 199  Q
    |||| ||||||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||    
T  1951348 tattgatgacagtcagtcattcactattttaagtatcattttcatgatatcttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatagaa 1951249  T
Q  200 gattttgaagaaagcaaaattgtgtcacgattgttaaaaacgtgtcacgatttagagcacaggatga 266  Q
    |||||  ||||||||||||| |||||||||||||| ||||||||||||||||| ||||| |||||||    
T  1951248 gatttcaaagaaagcaaaatcgtgtcacgattgttgaaaacgtgtcacgatttggagcataggatga 1951182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 105 - 266
Target Start/End: Original strand, 2793301 - 2793462
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagattt 204  Q
    ||||||||||||| |||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  2793301 atgacagtcagtcgttcactatttttagagtctttttaatgatattttgagttcacaagcaagtttaaacagtaaagaaaacaagaaaaatagaagattt 2793400  T
Q  205 tgaagaaagcaaaattgtgtcacgattgttaaaaacgtgtcacgatttagagcacaggatga 266  Q
     |||||||||||||| |||||||||||||| |||||||||||||||||  ||||||||||||    
T  2793401 cgaagaaagcaaaatcgtgtcacgattgttgaaaacgtgtcacgatttgaagcacaggatga 2793462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 105 - 258
Target Start/End: Complemental strand, 49499566 - 49499413
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagattt 204  Q
    ||||||||||||||||| || |||||||||| ||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||| |||||||    
T  49499566 atgacagtcagtcattcgctgtttttagtgttattttcatgatattttgagttcacatgcaagcttaaacaacaaagaaaacaagaaaaatagaagattt 49499467  T
Q  205 tgaagaaagcaaaattgtgtcacgattgttaaaaacgtgtcacgatttagagca 258  Q
    |||||||||||||||  ||||||||||||| ||||||||||||||||| |||||    
T  49499466 tgaagaaagcaaaatcatgtcacgattgttgaaaacgtgtcacgatttggagca 49499413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 105 - 266
Target Start/End: Complemental strand, 29644306 - 29644145
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatatttt-gagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagatt 203  Q
    ||||||||| |||||||   |||| ||| ||| |||| |||||||||| ||||||||||||||  |||| ||||||| ||| ||||||||||| |||| |    
T  29644306 atgacagtctgtcattccacatttatagagtcttttt-atgatatttttgagttcacaagcaaacttaagcagcaaaaaaagcaagaaaaatagaagact 29644208  T
Q  204 ttgaagaaagcaaaattgtgtcacgattgttaaaaacgtgtcacgatttagagcacaggatga 266  Q
    |||||||||| ||||| |||||||||||||| ||||||| ||||||||| |||||||||||||    
T  29644207 ttgaagaaagtaaaatcgtgtcacgattgttgaaaacgtatcacgatttggagcacaggatga 29644145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 105 - 212
Target Start/End: Original strand, 31204016 - 31204123
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagattt 204  Q
    |||| ||||||||||||  ||||||||||||||||||||| || ||||||||||||||||||| ||||||| ||| |||| || |||||||| |||||||    
T  31204016 atgatagtcagtcattctttatttttagtgtcattttcattatgttttgagttcacaagcaagcttaaacaacaaggaaagcatgaaaaatacaagattt 31204115  T
Q  205 tgaagaaa 212  Q
    ||||||||    
T  31204116 tgaagaaa 31204123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 143 - 266
Target Start/End: Complemental strand, 34733223 - 34733100
Alignment:
Q  143 atgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagattttgaagaaagcaaaattgtgtcacgattgttaaaaacgt 242  Q
    ||||| ||||||||||||||||||| |||||||| || |||| || ||||| |  |||||||||||||||| ||||| ||| |||||||||| ||||| |    
T  34733223 atgatcttttgagttcacaagcaagattaaacagtaaggaaatcatgaaaagttgaagattttgaagaaagtaaaatcgtgacacgattgttgaaaacat 34733124  T
Q  243 gtcacgatttagagcacaggatga 266  Q
    |||| ||||| |||||||||||||    
T  34733123 gtcaggatttggagcacaggatga 34733100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 6 - 99
Target Start/End: Complemental strand, 19782694 - 19782601
Alignment:
Q  6 ttttaggggttgggttatggagattggtgaagattttctggtttttgggttagggtaggaggggttatgaatttgggtgatgttggtttggatg 99  Q
    ||||||| |||||||| ||||| |||||||||| |||||||||||||||||||| ||   |||| || ||||||||||||||||||||||||||    
T  19782694 ttttaggagttgggttgtggaggttggtgaagaatttctggtttttgggttaggttaatgggggatacgaatttgggtgatgttggtttggatg 19782601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 105 - 212
Target Start/End: Complemental strand, 6071893 - 6071791
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagattt 204  Q
    |||||||||||||||||| |||||     |||||||||||| | ||||||||||||||||||| ||||||| |||  |||||| |||||||| |||||||    
T  6071893 atgacagtcagtcattcattattt-----gtcattttcatgttgttttgagttcacaagcaagcttaaacaacaagaaaaacatgaaaaatacaagattt 6071799  T
Q  205 tgaagaaa 212  Q
    ||||||||    
T  6071798 tgaagaaa 6071791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 105 - 212
Target Start/End: Complemental strand, 27537211 - 27537104
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgata-ttttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagatt 203  Q
    ||||||||||||||||  |||||||||  ||| |||| |||||| ||||||||||||||||||| ||||||| ||| |||| || |||||||| ||||||    
T  27537211 atgacagtcagtcatttgctatttttatagtcttttt-atgataattttgagttcacaagcaagcttaaacaacaaggaaagcatgaaaaatacaagatt 27537113  T
Q  204 ttgaagaaa 212  Q
    |||||||||    
T  27537112 ttgaagaaa 27537104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 105 - 212
Target Start/End: Complemental strand, 45961705 - 45961598
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgata-ttttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagatt 203  Q
    ||||||||||||||||  |||||||||| ||| | || |||||| ||||||||||||||||||| ||||||| ||| |||| || |||||||| ||||||    
T  45961705 atgacagtcagtcatttgctatttttagagtcttgtt-atgataattttgagttcacaagcaagcttaaacaacaaggaaagcatgaaaaatacaagatt 45961607  T
Q  204 ttgaagaaa 212  Q
    |||||||||    
T  45961606 ttgaagaaa 45961598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 105 - 195
Target Start/End: Complemental strand, 41059232 - 41059141
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgata-ttttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaat 195  Q
    ||||||||||||||||| |||||||||| ||| |||| |||||| |||||||||| |||||||| |||| ||||||  ||| ||||||||||    
T  41059232 atgacagtcagtcattcgctatttttagagtcttttttatgatatttttgagttcgcaagcaagcttaagcagcaagaaaagcaagaaaaat 41059141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 105 - 179
Target Start/End: Original strand, 2404724 - 2404798
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgata-ttttgagttcacaagcaagtttaaacagcaa 179  Q
    ||||||||||||||||| |||||||||| ||| |||| || ||| ||||||||||||||||||| |||| ||||||    
T  2404724 atgacagtcagtcattcgctatttttagagtc-tttttataatatttttgagttcacaagcaagattaagcagcaa 2404798  T

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Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 105 - 194
Target Start/End: Original strand, 42021723 - 42021812
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatattt-tgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaa 194  Q
    |||||||||| |||||| |||||||||| ||| |||| || |||||  ||||||||||||||||||||| ||||||  ||| |||||||||    
T  42021723 atgacagtcaatcattcgctatttttagagtcttttt-ataatattactgagttcacaagcaagtttaagcagcaataaaagcaagaaaaa 42021812  T

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Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 19878218 - 19878254
Alignment:
Q  23 tggagattggtgaagattttctggtttttgggttagg 59  Q
    |||||||||||||||||||| ||||||||||||||||    
T  19878218 tggagattggtgaagattttgtggtttttgggttagg 19878254  T

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Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 21801210 - 21801265
Alignment:
Q  3 gagttttaggggttgggttatggagattggtgaagattttctggtttttgggttagg 59  Q
    ||||||| |||||||||||||| ||||||||||||| |||  |||||||||||||||    
T  21801210 gagttttgggggttgggttatg-agattggtgaagaattttaggtttttgggttagg 21801265  T

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Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 179
Target Start/End: Complemental strand, 21019365 - 21019292
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgata-ttttgagttcacaagcaagtttaaacagcaa 179  Q
    ||||||||||||||||| |||||||||| |||  ||| |||||| |||||||||| ||| |||| |||| ||||||    
T  21019365 atgacagtcagtcattcgctatttttagagtc--ttttatgatatttttgagttcgcaaccaagcttaagcagcaa 21019292  T

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Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 141
Target Start/End: Complemental strand, 47708815 - 47708779
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcatttt 141  Q
    |||||||||||||||||||||||||||| ||| ||||    
T  47708815 atgacagtcagtcattcactatttttagagtcttttt 47708779  T

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Target: scaffold0035 (Bit Score: 108; Significance: 3e-54; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 105 - 252
Target Start/End: Original strand, 61599 - 61746
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagattt 204  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||| ||||| |||||||    
T  61599 atgacagtcagtcattcactgtttttagtgtcattttcatgatattttgagttcacaagcaagcttaaacaacaaagaaatcaagagaaatagaagattt 61698  T
Q  205 tgaagaaagcaaaattgtgtcacgattgttaaaaacgtgtcacgattt 252  Q
    | ||||||||||||| |||||||||||||  |||||||||||||||||    
T  61699 taaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgattt 61746  T

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Target: scaffold0334 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 105 - 227
Target Start/End: Original strand, 18465 - 18588
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataaga-tt 203  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||| |||| ||    
T  18465 atgacagtcagtcattcactgtttttagtgtcattttcatgatattttgagttcacatgcaagcttaaacaacaaagaaaacaagaaaaatagaagattt 18564  T
Q  204 ttgaagaaagcaaaattgtgtcac 227  Q
    |||||||||||||||  |||||||    
T  18565 ttgaagaaagcaaaaacgtgtcac 18588  T

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Target: scaffold0016 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 6 - 102
Target Start/End: Original strand, 196472 - 196568
Alignment:
Q  6 ttttaggggttgggttatggagattggtgaagattttctggtttttgggttagggtaggaggggttatgaatttgggtgatgttggtttggatgtat 102  Q
    |||||||||||||||||||||  |||||||||| |||||||||||||||||||| |||||| ||||| |||||||||||||||||||||||||||||    
T  196472 ttttaggggttgggttatggaagttggtgaagaatttctggtttttgggttaggttaggagcggttacgaatttgggtgatgttggtttggatgtat 196568  T

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Target: scaffold0151 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 13 - 102
Target Start/End: Complemental strand, 32965 - 32876
Alignment:
Q  13 ggttgggttatggagattggtgaagattttctggtttttgggttagggtaggaggggttatgaatttgggtgatgttggtttggatgtat 102  Q
    ||||||||||||||  |||||||||| |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  32965 ggttgggttatggaagttggtgaagaatttctggtttttgggttaggttaggaggggttacgaatttgggtgatgttggtttggatgtat 32876  T

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Target: scaffold0045 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 105 - 209
Target Start/End: Original strand, 88967 - 89071
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagattt 204  Q
    |||||||||||||||||  |||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||| |||| || |||||||| |||||||    
T  88967 atgacagtcagtcattcgttatttttagtgtcattttcatgatgttttgagttcacaagcaagcttaaacaacaaggaaagcatgaaaaatagaagattt 89066  T
Q  205 tgaag 209  Q
    |||||    
T  89067 tgaag 89071  T

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Target: scaffold1400 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold1400
Description:

Target: scaffold1400; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 991 - 1086
Alignment:
Q  3 gagttttaggggttgggttatggagattggtgaagattttctggtttttgggttagggtaggaggggttatgaatttgggtgatgttggtttggatg 99  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    |||||| |||||||||||||||| |||||||||    
T  991 gagttttaggggttgggttatggagattggtgaagaatttctggtttttgggttaggttaatgagggttacgaatttgggtgatgtt-gtttggatg 1086  T

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Target: scaffold1684 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold1684
Description:

Target: scaffold1684; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 105 - 208
Target Start/End: Complemental strand, 472 - 369
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagattt 204  Q
    |||| ||||||||||||  |||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||| |||  || |||||||| |||||||    
T  472 atgaaagtcagtcattctttatttttagtgtcattttcatgatgttttgagttcacaagcaagcttaaacaacaaggaacgcatgaaaaatacaagattt 373  T
Q  205 tgaa 208  Q
    ||||    
T  372 tgaa 369  T

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Target: scaffold0080 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 189 - 266
Target Start/End: Original strand, 26331 - 26408
Alignment:
Q  189 gaaaaatataagattttgaagaaagcaaaattgtgtcacgattgttaaaaacgtgtcacgatttagagcacaggatga 266  Q
    |||||||| |||||||||||||||||||||| |||||||||||||| |||||||||||||||||  ||||||||||||    
T  26331 gaaaaatagaagattttgaagaaagcaaaatcgtgtcacgattgttgaaaacgtgtcacgatttgaagcacaggatga 26408  T

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Target: scaffold0506 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0506
Description:

Target: scaffold0506; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 4591 - 4687
Alignment:
Q  3 gagttttaggggttgggttatggagattggtgaagattttctggtttttgggttagggtaggaggggttatgaatttgggtgatgttggtttggatg 99  Q
    |||||||||| |||||||| ||||| |||||||||| |||||||||||||||||||| ||   |||| || ||||||||||||||||||||||||||    
T  4591 gagttttaggagttgggttgtggaggttggtgaagaatttctggtttttgggttaggttaatgggggatacgaatttgggtgatgttggtttggatg 4687  T

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Target: scaffold0022 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 17082 - 16986
Alignment:
Q  3 gagttttaggggttgggttatggagattggtgaagattttctggtttttgggttagggtaggaggggttatgaatttgggtgatgttggtttggatg 99  Q
    ||||||||||||||||||||||||| |||||||||| |||||| ||||||||||||| || |   ||||| |||||||||||||||||||| |||||    
T  17082 gagttttaggggttgggttatggaggttggtgaagaatttctgctttttgggttaggttaaggaaggttacgaatttgggtgatgttggttgggatg 16986  T

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Target: scaffold0032 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 99
Target Start/End: Complemental strand, 89839 - 89746
Alignment:
Q  6 ttttaggggttgggttatggagattggtgaagattttctggtttttgggttagggtaggaggggttatgaatttgggtgatgttggtttggatg 99  Q
    ||||||| |||||||| ||||| |||||||||| |||||||||||||||||||| ||    |||||| || |||||||||||||||||||||||    
T  89839 ttttaggagttgggttgtggaggttggtgaagaatttctggtttttgggttaggttaatgtgggttacgattttgggtgatgttggtttggatg 89746  T

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Target: scaffold0757 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0757
Description:

Target: scaffold0757; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 105 - 194
Target Start/End: Original strand, 4565 - 4654
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgata-ttttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaa 194  Q
    |||||||||||||||||||||||||||| ||| |||| |||||| ||||||||||||||||||| |||| ||||||  ||| |||||||||    
T  4565 atgacagtcagtcattcactatttttagagtc-tttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaatcaagaaaaa 4654  T

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Target: scaffold0015 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 105 - 222
Target Start/End: Original strand, 197244 - 197361
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatatttt-gagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagatt 203  Q
    ||||||||| |||||||   |||||||| ||| |||| |||||||||| |||||||||||||||  ||| ||||||  ||| ||||||||||| ||||||    
T  197244 atgacagtctgtcattccacatttttagagtcttttt-atgatatttttgagttcacaagcaagcataagcagcaagaaaagcaagaaaaatagaagatt 197342  T
Q  204 ttgaagaaagcaaaattgt 222  Q
    |||||||||| ||||||||    
T  197343 ttgaagaaagtaaaattgt 197361  T

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Target: scaffold1799 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold1799
Description:

Target: scaffold1799; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 653 - 749
Alignment:
Q  3 gagttttaggggttgggttatggagattggtgaagattttctggtttttgggttagggtaggaggggttatgaatttgggtgatgttggtttggatg 99  Q
    |||||||| | |||||||| ||||| | ||||| || |||||||||||||||||||| ||   ||||||| ||||||||||||| ||||||||||||    
T  653 gagttttaagagttgggttgtggagttgggtgatgaatttctggtttttgggttaggttaatgggggttacgaatttgggtgattttggtttggatg 749  T

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Target: scaffold0156 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 8995 - 9091
Alignment:
Q  3 gagttttaggggttgggttatggagattggtgaagattttctggtttttgggttagggtaggaggggttatgaatttgggtgatgttggtttggatg 99  Q
    |||||||| | |||||||| ||||| ||||||| || ||| |||||||||||||||| ||   ||||||| ||||||||||||| ||||||||||||    
T  8995 gagttttaagagttgggttgtggagtttggtgatgaatttttggtttttgggttaggttaatgggggttacgaatttgggtgattttggtttggatg 9091  T

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Target: scaffold0078 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 28235 - 28133
Alignment:
Q  3 gagttttaggggttgggttatggagattggtgaagattttctggt------ttttgggttagggtaggaggggttatgaatttgggtgatgttggtttgg 96  Q
    |||||||||||| | |||||||||| |||||||||| ||||||||      ||||  |||||| ||||| |||||| |||||||||| ||||||||||||    
T  28235 gagttttaggggctcggttatggaggttggtgaagaatttctggtttttttttttttgttaggttaggaagggttacgaatttgggttatgttggtttgg 28136  T
Q  97 atg 99  Q
    |||    
T  28135 atg 28133  T

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Target: scaffold0381 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 105 - 194
Target Start/End: Complemental strand, 6552 - 6462
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgata-ttttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaa 194  Q
    ||||||||||||||||| |||||||||| ||| |||| |||||| ||||||||||||| ||||| |||| || |||  ||| |||||||||    
T  6552 atgacagtcagtcattcgctatttttagagtcttttttatgatatttttgagttcacaggcaagcttaagcaacaagaaaagcaagaaaaa 6462  T

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Target: scaffold0270 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 3)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 105 - 194
Target Start/End: Complemental strand, 1058 - 969
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatatttt-gagttcacaagcaagtttaaacagcaaagaaaacaagaaaaa 194  Q
    ||||||||||||||||| ||| |||||| || ||||| |||||||||| ||||||||||||||| |||| ||||||  ||| |||||||||    
T  1058 atgacagtcagtcattcgctacttttagagt-atttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaagcaagaaaaa 969  T

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Target: scaffold0270; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 99 - 194
Target Start/End: Complemental strand, 4424 - 4329
Alignment:
Q  99 gtattaatgacagtcagtcattcactatttttagtgtcattttcatgatatttt-gagttcacaagcaagtttaaacagcaaagaaaacaagaaaaa 194  Q
    ||||| ||| ||||||||||||| ||| |||||| ||| |||| |||||||||| ||||||||||||||| |||| ||||||  ||| |||||||||    
T  4424 gtattgatgtcagtcagtcattcgctacttttagagtcttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaagcaagaaaaa 4329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 99 - 194
Target Start/End: Complemental strand, 11554 - 11459
Alignment:
Q  99 gtattaatgacagtcagtcattcactatttttagtgtcattttcatgatatttt-gagttcacaagcaagtttaaacagcaaagaaaacaagaaaaa 194  Q
    ||||| ||| ||||||||||||| ||| |||||| ||| |||| |||||||||| ||||||||||||||| |||| ||||||  ||| |||||||||    
T  11554 gtattgatgtcagtcagtcattcgctacttttagagtcttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaagcaagaaaaa 11459  T

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Target: scaffold0011 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 99
Target Start/End: Original strand, 30348 - 30434
Alignment:
Q  14 gttgggttatggagattggtgaagattttctggtt-tttgggttagggtaggaggggttatgaatttgggtgatgttggtttggatg 99  Q
    |||||||| ||||| ||||||| || ||||||| | ||||||||||||||   ||||||| ||||||||||||| ||||||||||||    
T  30348 gttgggttgtggagtttggtgatgaatttctgggtctttgggttagggtaatgggggttacgaatttgggtgattttggtttggatg 30434  T

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Target: scaffold0150 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 99
Target Start/End: Original strand, 22061 - 22151
Alignment:
Q  8 ttaggggttgggttatggagattggtgaagattttctggtttttgggttagg-gtaggaggggttatgaatttgggtgatgttggtttggatg 99  Q
    |||||||||| |||||||||||||||||||| |||  |||||||||||||||  || ||  ||||| |||||||||||||||| |||||||||    
T  22061 ttaggggttgagttatggagattggtgaagaatttaaggtttttgggttaggtttatga-aggttacgaatttgggtgatgtt-gtttggatg 22151  T

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Target: scaffold0520 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0520
Description:

Target: scaffold0520; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 105 - 193
Target Start/End: Complemental strand, 4878 - 4790
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcattttcatgatatttt-gagttcacaagcaagtttaaacagcaaagaaaacaagaaaa 193  Q
    |||||||||||||||||  ||||||||| ||| |||| |||||||||| |||||||||| |||| |||| ||||||| |||  |||||||    
T  4878 atgacagtcagtcattcgttatttttagagtcttttt-atgatatttttgagttcacaaacaagattaagcagcaaaaaaagaaagaaaa 4790  T

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Target: scaffold0051 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 26900 - 26983
Alignment:
Q  3 gagttttaggggttgggttatggagattggtgaagattttctggtttt-tgggttagggtaggaggggttatgaatttgggtgat 86  Q
    |||||||||| |||||||| ||||| ||||||| || ||||||||||| ||||||||| ||   || ||||||||||||||||||    
T  26900 gagttttaggagttgggttgtggagtttggtgatgaatttctggttttgtgggttaggtta-atggagttatgaatttgggtgat 26983  T

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Target: scaffold1756 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold1756
Description:

Target: scaffold1756; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 68 - 99
Target Start/End: Complemental strand, 325 - 294
Alignment:
Q  68 ggttatgaatttgggtgatgttggtttggatg 99  Q
    ||||||||||||||||||||||||||||||||    
T  325 ggttatgaatttgggtgatgttggtttggatg 294  T

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Target: scaffold0146 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 53
Target Start/End: Complemental strand, 20556 - 20506
Alignment:
Q  3 gagttttaggggttgggttatggagattggtgaagattttctggtttttgg 53  Q
    ||||||||||||||||||| |||| |||||||| || ||||||| ||||||    
T  20556 gagttttaggggttgggttgtggaaattggtgatgaatttctgggttttgg 20506  T

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Target: scaffold0741 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0741
Description:

Target: scaffold0741; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 623 - 675
Alignment:
Q  3 gagttttaggggttgggttatggagattggtgaagattttctggtttttgggt 55  Q
    ||||||||||||||||||| |||| |||||||| || ||| ||| ||||||||    
T  623 gagttttaggggttgggttgtggaaattggtgatgaatttgtgggttttgggt 675  T

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Target: scaffold0567 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0567
Description:

Target: scaffold0567; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 141
Target Start/End: Complemental strand, 7053 - 7017
Alignment:
Q  105 atgacagtcagtcattcactatttttagtgtcatttt 141  Q
    |||||||||||||||||||||||||||| ||| ||||    
T  7053 atgacagtcagtcattcactatttttagagtcttttt 7017  T

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Target: scaffold0326 (Bit Score: 29; Significance: 0.0000004; HSPs: 2)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 7182 - 7086
Alignment:
Q  3 gagttttaggggttgggttatggagattggtgaagattttctggtttttgggttagggtaggaggggttatgaatttgggtgatgttggtttggatg 99  Q
    |||||||| | ||| |||| ||||| ||||||| || ||||||||||| ||||| || ||   |||| || ||||||||||| | ||||||||||||    
T  7182 gagttttaagagttaggttgtggagtttggtgatgaatttctggttttggggttcggttaatgggggctacgaatttgggtggttttggtttggatg 7086  T

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Target: scaffold0326; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 15084 - 14988
Alignment:
Q  3 gagttttaggggttgggttatggagattggtgaagattttctggtttttgggttagggtaggaggggttatgaatttgggtgatgttggtttggatg 99  Q
    |||||||| | ||| |||| ||||| ||||||| || ||||||||||| ||||| || ||   |||| || ||||||||||| | ||||||||||||    
T  15084 gagttttaagagttaggttgtggagtttggtgatgaatttctggttttggggttcggttaatgggggctacgaatttgggtggttttggtttggatg 14988  T

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Target: scaffold0142 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 23544 - 23596
Alignment:
Q  3 gagttttaggggttgggttatggagattggtgaagattttctggtttttgggt 55  Q
    ||||||||||||||||||| |||| |||||||| || ||| ||| ||||||||    
T  23544 gagttttaggggttgggttgtggaaattggtgatgaatttgtggattttgggt 23596  T

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Target: scaffold0075 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 36882 - 36978
Alignment:
Q  3 gagttttaggggttgggttatggagattggtgaagattttctggtttttgggttagggtaggaggggttatgaatttgggtgatgttggtttggatg 99  Q
    |||||||| | |||||||| ||||| ||||||| || ||| | | |||||||||||| ||   ||||| | ||||||||||||| || |||||||||    
T  36882 gagttttaagagttgggttgtggagtttggtgatgaatttgttggttttgggttaggttaatgggggtgacgaatttgggtgatttttgtttggatg 36978  T

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Target: scaffold0026 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 131640 - 131588
Alignment:
Q  3 gagttttaggggttgggttatggagattggtgaagattttctggtttttgggt 55  Q
    ||||||||||||||||||| |||| |||||||| || ||| ||| ||||||||    
T  131640 gagttttaggggttgggttgtggaaattggtgatgaatttatgggttttgggt 131588  T

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Target: scaffold0018 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 14981 - 15033
Alignment:
Q  3 gagttttaggggttgggttatggagattggtgaagattttctggtttttgggt 55  Q
    ||||||||||||||||||| |||| |||||||| || ||| ||| ||||||||    
T  14981 gagttttaggggttgggttgtggaaattggtgatgaatttgtgggttttgggt 15033  T

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