View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8548A_low_168 (Length: 260)

Name: NF8548A_low_168
Description: NF8548A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8548A_low_168
NF8548A_low_168
[»] chr5 (17 HSPs)
chr5 (62-172)||(38469653-38469762)
chr5 (184-245)||(19271862-19271924)
chr5 (184-245)||(34381015-34381077)
chr5 (184-247)||(18695321-18695386)
chr5 (184-243)||(39595275-39595335)
chr5 (184-238)||(31708373-31708428)
chr5 (184-245)||(28903994-28904056)
chr5 (184-245)||(28940389-28940451)
chr5 (184-245)||(36548386-36548448)
chr5 (184-245)||(36713184-36713246)
chr5 (184-245)||(40223791-40223853)
chr5 (184-245)||(25364843-25364904)
chr5 (184-244)||(29807009-29807070)
chr5 (178-245)||(6515444-6515512)
chr5 (178-245)||(10232496-10232564)
chr5 (178-238)||(14073049-14073109)
chr5 (182-245)||(18449262-18449326)
[»] chr4 (33 HSPs)
chr4 (178-244)||(49424827-49424894)
chr4 (178-238)||(1562549-1562610)
chr4 (182-245)||(12694434-12694498)
chr4 (178-245)||(33820342-33820410)
chr4 (178-245)||(38844496-38844564)
chr4 (178-245)||(53583134-53583202)
chr4 (178-245)||(55595946-55596014)
chr4 (179-245)||(4896506-4896573)
chr4 (179-245)||(12241056-12241123)
chr4 (178-245)||(18874928-18874995)
chr4 (178-247)||(37514135-37514206)
chr4 (178-247)||(42815401-42815472)
chr4 (184-238)||(47998597-47998652)
chr4 (178-245)||(49194881-49194948)
chr4 (184-245)||(10994158-10994220)
chr4 (184-245)||(11064095-11064157)
chr4 (184-245)||(25725700-25725762)
chr4 (184-245)||(29513702-29513764)
chr4 (184-245)||(31147234-31147296)
chr4 (184-245)||(34116546-34116608)
chr4 (184-245)||(39881036-39881098)
chr4 (184-245)||(45286121-45286183)
chr4 (184-245)||(46794507-46794569)
chr4 (184-245)||(51039122-51039184)
chr4 (184-245)||(51224844-51224906)
chr4 (184-245)||(56025259-56025321)
chr4 (184-247)||(3078911-3078976)
chr4 (178-238)||(3286815-3286876)
chr4 (184-243)||(40629348-40629408)
chr4 (178-245)||(47519726-47519794)
chr4 (178-245)||(48722066-48722134)
chr4 (178-245)||(48743707-48743775)
chr4 (178-245)||(49768875-49768943)
[»] chr2 (13 HSPs)
chr2 (184-245)||(4432317-4432379)
chr2 (184-245)||(31635816-31635878)
chr2 (178-245)||(7497997-7498065)
chr2 (179-245)||(14797656-14797723)
chr2 (179-247)||(5031921-5031991)
chr2 (184-245)||(5455459-5455521)
chr2 (184-245)||(30856810-30856872)
chr2 (178-243)||(31296853-31296919)
chr2 (184-245)||(36376855-36376917)
chr2 (178-245)||(1889144-1889212)
chr2 (178-245)||(4738578-4738646)
chr2 (178-245)||(36132971-36133039)
chr2 (184-245)||(41868375-41868438)
[»] chr8 (13 HSPs)
chr8 (184-247)||(10644805-10644870)
chr8 (184-244)||(34970210-34970271)
chr8 (178-245)||(45101393-45101461)
chr8 (179-245)||(21418598-21418665)
chr8 (180-245)||(6105442-6105508)
chr8 (178-238)||(40719656-40719717)
chr8 (178-245)||(44380620-44380688)
chr8 (184-245)||(12659055-12659117)
chr8 (184-245)||(29509269-29509331)
chr8 (184-237)||(35937526-35937580)
chr8 (184-244)||(31806302-31806363)
chr8 (178-245)||(7678729-7678797)
chr8 (178-245)||(12045659-12045727)
[»] chr6 (15 HSPs)
chr6 (179-245)||(28965846-28965913)
chr6 (178-245)||(237404-237472)
chr6 (184-243)||(17835615-17835675)
chr6 (179-245)||(8778878-8778945)
chr6 (179-245)||(19789082-19789149)
chr6 (179-245)||(29383555-29383622)
chr6 (184-245)||(8395345-8395407)
chr6 (184-245)||(21506339-21506401)
chr6 (184-245)||(25924870-25924932)
chr6 (184-247)||(34570598-34570663)
chr6 (178-245)||(3339505-3339573)
chr6 (178-245)||(11785352-11785420)
chr6 (178-245)||(15722509-15722577)
chr6 (184-235)||(28883764-28883816)
chr6 (216-248)||(29467390-29467422)
[»] chr7 (12 HSPs)
chr7 (184-245)||(2790180-2790242)
chr7 (184-245)||(19426583-19426645)
chr7 (184-245)||(20406544-20406606)
chr7 (178-245)||(28824500-28824568)
chr7 (182-247)||(1471294-1471361)
chr7 (179-245)||(5378625-5378692)
chr7 (179-245)||(9055265-9055332)
chr7 (178-247)||(46829476-46829547)
chr7 (184-245)||(40842408-40842470)
chr7 (184-245)||(30769667-30769727)
chr7 (178-245)||(33684677-33684745)
chr7 (178-238)||(36920801-36920861)
[»] chr3 (37 HSPs)
chr3 (179-244)||(11335309-11335375)
chr3 (184-245)||(14207378-14207440)
chr3 (184-245)||(14215126-14215188)
chr3 (184-245)||(48649583-48649645)
chr3 (184-247)||(29573359-29573424)
chr3 (178-245)||(1901932-1902000)
chr3 (178-245)||(1911378-1911446)
chr3 (178-245)||(26279881-26279949)
chr3 (175-238)||(35272021-35272085)
chr3 (174-245)||(43900763-43900835)
chr3 (178-245)||(49196693-49196761)
chr3 (179-245)||(108429-108496)
chr3 (179-245)||(43176200-43176267)
chr3 (184-245)||(32457761-32457823)
chr3 (184-245)||(37303080-37303142)
chr3 (180-245)||(39540234-39540300)
chr3 (184-245)||(41877617-41877679)
chr3 (184-245)||(41877691-41877753)
chr3 (184-245)||(44334807-44334869)
chr3 (184-245)||(47988491-47988553)
chr3 (184-245)||(47997778-47997840)
chr3 (184-245)||(48007065-48007127)
chr3 (184-245)||(51032630-51032692)
chr3 (184-245)||(51464278-51464340)
chr3 (184-244)||(8066358-8066419)
chr3 (178-238)||(18169154-18169215)
chr3 (178-245)||(37894248-37894317)
chr3 (184-243)||(462409-462469)
chr3 (178-245)||(8254024-8254092)
chr3 (184-243)||(20380897-20380957)
chr3 (178-245)||(21579111-21579179)
chr3 (178-245)||(22813069-22813137)
chr3 (178-245)||(27162475-27162543)
chr3 (184-238)||(29525867-29525923)
chr3 (183-245)||(32187143-32187207)
chr3 (184-243)||(34271498-34271558)
chr3 (178-245)||(40159844-40159912)
[»] chr1 (16 HSPs)
chr1 (184-245)||(18541057-18541119)
chr1 (184-238)||(29877300-29877356)
chr1 (179-238)||(50226892-50226952)
chr1 (179-245)||(2257700-2257767)
chr1 (172-238)||(49189221-49189288)
chr1 (184-245)||(9445111-9445173)
chr1 (184-245)||(16658441-16658503)
chr1 (184-245)||(25098794-25098856)
chr1 (184-245)||(27810253-27810315)
chr1 (184-245)||(51339706-51339768)
chr1 (177-245)||(27352626-27352695)
chr1 (177-245)||(49596231-49596300)
chr1 (178-245)||(12708087-12708155)
chr1 (178-245)||(18610770-18610838)
chr1 (179-245)||(21433406-21433474)
chr1 (178-245)||(42256457-42256525)
[»] scaffold0009 (1 HSPs)
scaffold0009 (180-238)||(263708-263767)
[»] scaffold0003 (1 HSPs)
scaffold0003 (184-245)||(366297-366359)
[»] scaffold0087 (1 HSPs)
scaffold0087 (179-238)||(27076-27136)
[»] scaffold0014 (1 HSPs)
scaffold0014 (178-245)||(199263-199331)
[»] scaffold0011 (1 HSPs)
scaffold0011 (178-245)||(219670-219738)


Alignment Details
Target: chr5 (Bit Score: 61; Significance: 3e-26; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 62 - 172
Target Start/End: Complemental strand, 38469762 - 38469653
Alignment:
Q  62 tactagcaccgaaagggctcata-tttaagggaaaaccattccaatcattaactagagcgtggtgacaaaatggaatccaagaacaccaatatgacgatt 160  Q
    ||||||||||||||||||||||| |||||||||||||||| ||| |||||||||||||| |||||||| |  | ||||||||||| ||||||| ||||||    
T  38469762 tactagcaccgaaagggctcataatttaagggaaaaccatgccattcattaactagagcctggtgacaca--gaaatccaagaacgccaatataacgatt 38469665  T
Q  161 gtgccactggat 172  Q
    ||||||| ||||    
T  38469664 gtgccacgggat 38469653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 245
Target Start/End: Original strand, 19271862 - 19271924
Alignment:
Q  184 aaatgatatttgtacaacc-tcttgtaacaaccttatgacaactttctctctcataatcacat 245  Q
    ||||||||||||||||||| | |||||||||| ||  ||||||||||||||||||| ||||||    
T  19271862 aaatgatatttgtacaaccattttgtaacaacgtttagacaactttctctctcatactcacat 19271924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 245
Target Start/End: Original strand, 34381015 - 34381077
Alignment:
Q  184 aaatgatatttgtacaacctctt-gtaacaaccttatgacaactttctctctcataatcacat 245  Q
    ||||||||||||||||||| ||| || ||||| || |||||||||||||||||||| ||||||    
T  34381015 aaatgatatttgtacaaccactttgtgacaactttttgacaactttctctctcatactcacat 34381077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 247
Target Start/End: Original strand, 18695321 - 18695386
Alignment:
Q  184 aaatgatatttgtacaacc-tcttgtaacaacctta-tgacaactttctctctcataatcacatat 247  Q
    ||||||||||||||||||| | |||||||||| ||  |||||||||||||||||||| ||||||||    
T  18695321 aaatgatatttgtacaaccattttgtaacaacttttgtgacaactttctctctcatactcacatat 18695386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 243
Target Start/End: Original strand, 39595275 - 39595335
Alignment:
Q  184 aaatgatatttgtacaacctctt-gtaacaaccttatgacaactttctctctcataatcac 243  Q
    ||||||||||||||||||| ||| || ||||| || |||||||||||||||||||| ||||    
T  39595275 aaatgatatttgtacaaccactttgtgacaactttttgacaactttctctctcatactcac 39595335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 238
Target Start/End: Original strand, 31708373 - 31708428
Alignment:
Q  184 aaatgatatttgtacaacc-tcttgtaacaaccttatgacaactttctctctcata 238  Q
    ||||||||||||||||||| | || ||||||| || ||||||||||||||||||||    
T  31708373 aaatgatatttgtacaaccattttataacaactttttgacaactttctctctcata 31708428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 245
Target Start/End: Original strand, 28903994 - 28904056
Alignment:
Q  184 aaatgatatttgtacaacctc-ttgtaacaaccttatgacaactttctctctcataatcacat 245  Q
    ||||||||||||||||||| | |||| ||||| ||  ||||||||||||||||||| ||||||    
T  28903994 aaatgatatttgtacaaccacattgtgacaacttttagacaactttctctctcatactcacat 28904056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 245
Target Start/End: Original strand, 28940389 - 28940451
Alignment:
Q  184 aaatgatatttgtacaacctc-ttgtaacaaccttatgacaactttctctctcataatcacat 245  Q
    ||||||||||||||||||| | |||| ||||| ||  ||||||||||||||||||| ||||||    
T  28940389 aaatgatatttgtacaaccacattgtgacaacttttagacaactttctctctcatactcacat 28940451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 245
Target Start/End: Complemental strand, 36548448 - 36548386
Alignment:
Q  184 aaatgatatttgtacaacc-tcttgtaacaaccttatgacaactttctctctcataatcacat 245  Q
    |||||||||||||| |||| | |||| ||||| || |||||||||||||||||||| ||||||    
T  36548448 aaatgatatttgtataaccattttgtgacaactttctgacaactttctctctcatactcacat 36548386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 245
Target Start/End: Complemental strand, 36713246 - 36713184
Alignment:
Q  184 aaatgatatttgtacaacctctt-gtaacaaccttatgacaactttctctctcataatcacat 245  Q
    ||||||||||||||||||| ||| || ||||| |  |||||||||||||||||||| ||||||    
T  36713246 aaatgatatttgtacaaccactttgtgacaacttcttgacaactttctctctcatactcacat 36713184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 245
Target Start/End: Complemental strand, 40223853 - 40223791
Alignment:
Q  184 aaatgatatttgtacaacctctt-gtaacaaccttatgacaactttctctctcataatcacat 245  Q
    |||| |||||||||||||| ||| || ||||| || |||||||||||||||||||| ||||||    
T  40223853 aaattatatttgtacaaccactttgtgacaactttttgacaactttctctctcatactcacat 40223791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 245
Target Start/End: Complemental strand, 25364904 - 25364843
Alignment:
Q  184 aaatgatatttgtacaacctcttgtaacaaccttatgacaactttctctctcataatcacat 245  Q
    ||||||||||||||||||| ||||| ||||| || ||||||| || ||| ||||| ||||||    
T  25364904 aaatgatatttgtacaaccacttgtgacaactttttgacaacattatctttcatactcacat 25364843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 244
Target Start/End: Complemental strand, 29807070 - 29807009
Alignment:
Q  184 aaatgatatttgtacaacc-tcttgtaacaaccttatgacaactttctctctcataatcaca 244  Q
    |||||| |||||||||||| | || |||||| ||| |||||||||||||||||||| |||||    
T  29807070 aaatgacatttgtacaaccattttttaacaatcttttgacaactttctctctcatactcaca 29807009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 245
Target Start/End: Complemental strand, 6515512 - 6515444
Alignment:
Q  178 aaagaaaaatgatatttgtacaacc-tcttgtaacaaccttatgacaactttctctctcataatcacat 245  Q
    |||||||||||||||||||||||||  ||||| ||||| || ||| ||||| |||| ||||| ||||||    
T  6515512 aaagaaaaatgatatttgtacaaccaccttgtgacaactttttgaaaacttcctctatcatattcacat 6515444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 245
Target Start/End: Original strand, 10232496 - 10232564
Alignment:
Q  178 aaagaaaaatgatatttgtacaacctctt-gtaacaaccttatgacaactttctctctcataatcacat 245  Q
    ||||| |||||||||||||||| |  ||| || | |||||| |||||||||||||||||||| ||||||    
T  10232496 aaagagaaatgatatttgtacatcaactttgtgataaccttttgacaactttctctctcatattcacat 10232564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 238
Target Start/End: Original strand, 14073049 - 14073109
Alignment:
Q  178 aaagaaaaatgatatttgtacaacctcttgtaacaaccttatgacaactttctctctcata 238  Q
    ||||| |||||||||||||||| ||  |||| |||||||| ||| || |||||||||||||    
T  14073049 aaagagaaatgatatttgtacatccatttgtgacaaccttttgataattttctctctcata 14073109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 245
Target Start/End: Original strand, 18449262 - 18449326
Alignment:
Q  182 aaaaatgatatttgtacaacctctt-gtaacaaccttatgacaactttctctctcataatcacat 245  Q
    |||||||||||||||||| || ||| || ||||| || | |||||||||||||||||| ||||||    
T  18449262 aaaaatgatatttgtacatccactttgtgacaactttttaacaactttctctctcatactcacat 18449326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 178 - 244
Target Start/End: Complemental strand, 49424894 - 49424827
Alignment:
Q  178 aaagaaaaatgatatttgtacaacctctt-gtaacaaccttatgacaactttctctctcataatcaca 244  Q
    ||||| |||||||||||||||||||| || |||||||| || |||||||||||||||||||| |||||    
T  49424894 aaagagaaatgatatttgtacaacctttttgtaacaactttttgacaactttctctctcatactcaca 49424827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 238
Target Start/End: Complemental strand, 1562610 - 1562549
Alignment:
Q  178 aaagaaaaatgatatttgtacaacc-tcttgtaacaaccttatgacaactttctctctcata 238  Q
    ||||| ||||||||||||||||||| | || ||||||| || ||||||||||||||||||||    
T  1562610 aaagagaaatgatatttgtacaaccattttctaacaactttttgacaactttctctctcata 1562549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 245
Target Start/End: Complemental strand, 12694498 - 12694434
Alignment:
Q  182 aaaaatgatatttgtacaacc-tcttgtaacaaccttatgacaactttctctctcataatcacat 245  Q
    ||||||||||||||||||||| | |||| ||||| || ||| |||||||||||||||| ||||||    
T  12694498 aaaaatgatatttgtacaaccattttgtgacaactttttgataactttctctctcatattcacat 12694434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 245
Target Start/End: Complemental strand, 33820410 - 33820342
Alignment:
Q  178 aaagaaaaatgatatttgtacaacc-tcttgtaacaaccttatgacaactttctctctcataatcacat 245  Q
    ||||| ||||||||||||||||||  | || ||||||| || |||||||||||||||||||| ||||||    
T  33820410 aaagagaaatgatatttgtacaactattttctaacaactttttgacaactttctctctcatactcacat 33820342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 245
Target Start/End: Complemental strand, 38844564 - 38844496
Alignment:
Q  178 aaagaaaaatgatatttgtacaacctc-ttgtaacaaccttatgacaactttctctctcataatcacat 245  Q
    ||||||||||||||||||||||||| | || | ||||| || |||||||||||||||| ||| ||||||    
T  38844564 aaagaaaaatgatatttgtacaaccactttctcacaactttttgacaactttctctcttatattcacat 38844496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 245
Target Start/End: Complemental strand, 53583202 - 53583134
Alignment:
Q  178 aaagaaaaatgatatttgtacaacctcttg-taacaaccttatgacaactttctctctcataatcacat 245  Q
    ||||| ||||||||||||||||||| |||  | ||||| || |||||||||||||||||||| ||||||    
T  53583202 aaagagaaatgatatttgtacaaccactttctcacaactttttgacaactttctctctcatactcacat 53583134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 245
Target Start/End: Original strand, 55595946 - 55596014
Alignment:
Q  178 aaagaaaaatgatatttgtacaacctcttg-taacaaccttatgacaactttctctctcataatcacat 245  Q
    ||||| |||||||||||||||||||  ||  ||||||| || |||||||||||||||||||| ||||||    
T  55595946 aaagagaaatgatatttgtacaaccaatttctaacaactttttgacaactttctctctcatactcacat 55596014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 179 - 245
Target Start/End: Complemental strand, 4896573 - 4896506
Alignment:
Q  179 aagaaaaatgatatttgtacaacctctt-gtaacaaccttatgacaactttctctctcataatcacat 245  Q
    |||| ||||||||||||||||||| ||| || ||||| || ||||||||||||||| |||| ||||||    
T  4896573 aagagaaatgatatttgtacaaccactttgtgacaactttttgacaactttctctcgcatactcacat 4896506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 179 - 245
Target Start/End: Original strand, 12241056 - 12241123
Alignment:
Q  179 aagaaaaatgatatttgtacaacc-tcttgtaacaaccttatgacaactttctctctcataatcacat 245  Q
    |||| ||||||||||||||||||  | || ||||||| || |||||||||||||||||||| ||||||    
T  12241056 aagagaaatgatatttgtacaactattttctaacaactttttgacaactttctctctcatactcacat 12241123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 178 - 245
Target Start/End: Complemental strand, 18874995 - 18874928
Alignment:
Q  178 aaagaaaaatgatatttgtacaacctcttgtaacaaccttatgacaactttctctctcataatcacat 245  Q
    ||||| |||||||||||||||||| | || | ||||| ||  ||||||||||||||||||| ||||||    
T  18874995 aaagagaaatgatatttgtacaacattttttgacaacttttagacaactttctctctcatactcacat 18874928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 178 - 247
Target Start/End: Complemental strand, 37514206 - 37514135
Alignment:
Q  178 aaagaaaaatgatatttgtacaacc-tcttgtaacaacctta-tgacaactttctctctcataatcacatat 247  Q
    ||||| |||||||||||||||| || | |||||||||| ||  |||||||||||||||||||| ||||||||    
T  37514206 aaagagaaatgatatttgtacatccattttgtaacaacttttgtgacaactttctctctcatactcacatat 37514135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 178 - 247
Target Start/End: Original strand, 42815401 - 42815472
Alignment:
Q  178 aaagaaaaatgatatttgtacaacc-tcttgtaacaacctta-tgacaactttctctctcataatcacatat 247  Q
    ||||| ||||||||||||||||||  | |||||||||| ||  |||||||||||||||||||| ||||||||    
T  42815401 aaagagaaatgatatttgtacaactattttgtaacaacttttgtgacaactttctctctcatactcacatat 42815472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 238
Target Start/End: Original strand, 47998597 - 47998652
Alignment:
Q  184 aaatgatatttgtacaacc-tcttgtaacaaccttatgacaactttctctctcata 238  Q
    ||||||||||||||||||| | |||||||||| || |||||||||| |||||||||    
T  47998597 aaatgatatttgtacaaccattttgtaacaactttttgacaactttttctctcata 47998652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 178 - 245
Target Start/End: Original strand, 49194881 - 49194948
Alignment:
Q  178 aaagaaaaatgatatttgtacaacctcttgtaacaaccttatgacaactttctctctcataatcacat 245  Q
    ||||| |||||||||||||||||||  || | |||| ||| |||||||||||||||| ||| ||||||    
T  49194881 aaagagaaatgatatttgtacaaccatttatgacaatcttttgacaactttctctcttatactcacat 49194948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 245
Target Start/End: Complemental strand, 10994220 - 10994158
Alignment:
Q  184 aaatgatatttgtacaacc-tcttgtaacaaccttatgacaactttctctctcataatcacat 245  Q
    ||||||||||||||||||| | |||| |||| ||| |||||||||| ||||||||| ||||||    
T  10994220 aaatgatatttgtacaaccattttgtgacaatcttttgacaactttatctctcatactcacat 10994158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 245
Target Start/End: Complemental strand, 11064157 - 11064095
Alignment:
Q  184 aaatgatatttgtacaacctctt-gtaacaaccttatgacaactttctctctcataatcacat 245  Q
    ||||||||||||||||||| ||| || ||||| || ||||||| |||||||||||| ||||||    
T  11064157 aaatgatatttgtacaaccactttgtgacaactttttgacaacattctctctcatactcacat 11064095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 245
Target Start/End: Complemental strand, 25725762 - 25725700
Alignment:
Q  184 aaatgatatttgtacaacctcttg-taacaaccttatgacaactttctctctcataatcacat 245  Q
    ||||||||||||||||||| |||  ||||||| || |||||||||||||| ||||| ||||||    
T  25725762 aaatgatatttgtacaaccactttctaacaactttttgacaactttctctttcatactcacat 25725700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 245
Target Start/End: Complemental strand, 29513764 - 29513702
Alignment:
Q  184 aaatgatatttgtacaacc-tcttgtaacaaccttatgacaactttctctctcataatcacat 245  Q
    ||||||||||||||||||| | |||  ||||| || |||||||||||||||||||| ||||||    
T  29513764 aaatgatatttgtacaaccattttgctacaactttttgacaactttctctctcatactcacat 29513702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 245
Target Start/End: Original strand, 31147234 - 31147296
Alignment:
Q  184 aaatgatatttgtacaacctcttg-taacaaccttatgacaactttctctctcataatcacat 245  Q
    ||||||||||||||||||| |||  | ||||  || |||||||||||||||||||||||||||    
T  31147234 aaatgatatttgtacaaccactttattacaattttttgacaactttctctctcataatcacat 31147296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 245
Target Start/End: Complemental strand, 34116608 - 34116546
Alignment:
Q  184 aaatgatatttgtacaacctctt-gtaacaaccttatgacaactttctctctcataatcacat 245  Q
    ||||||||||||||||||| ||| || ||||| || |||||| ||||||||||||| ||||||    
T  34116608 aaatgatatttgtacaaccactttgtgacaactttttgacaattttctctctcatactcacat 34116546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 245
Target Start/End: Complemental strand, 39881098 - 39881036
Alignment:
Q  184 aaatgatatttgtacaacc-tcttgtaacaaccttatgacaactttctctctcataatcacat 245  Q
    ||||||||||||||||| | | || ||||||| || |||||||||||||||||||| ||||||    
T  39881098 aaatgatatttgtacaatcattttctaacaactttttgacaactttctctctcatactcacat 39881036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 245
Target Start/End: Complemental strand, 45286183 - 45286121
Alignment:
Q  184 aaatgatatttgtacaacc-tcttgtaacaaccttatgacaactttctctctcataatcacat 245  Q
    ||||||||||||||||||| | ||| |||||| ||  ||||||||||||||||||| ||||||    
T  45286183 aaatgatatttgtacaaccattttgcaacaactttcagacaactttctctctcatactcacat 45286121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 245
Target Start/End: Complemental strand, 46794569 - 46794507
Alignment:
Q  184 aaatgatatttgtacaacctcttg-taacaaccttatgacaactttctctctcataatcacat 245  Q
    ||||||||||||||||||| |||  | ||||| || |||||||||||||||||||| ||||||    
T  46794569 aaatgatatttgtacaaccactttctgacaactttttgacaactttctctctcatactcacat 46794507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 245
Target Start/End: Complemental strand, 51039184 - 51039122
Alignment:
Q  184 aaatgatatttgtacaacctctt-gtaacaaccttatgacaactttctctctcataatcacat 245  Q
    ||||||||||||||||||  ||| || ||||| || |||||||||| ||||||||||||||||    
T  51039184 aaatgatatttgtacaactactttgtgacaactttttgacaactttatctctcataatcacat 51039122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 245
Target Start/End: Complemental strand, 51224906 - 51224844
Alignment:
Q  184 aaatgatatttgtacaacc-tcttgtaacaaccttatgacaactttctctctcataatcacat 245  Q
    ||||||||||||||||||| | |||  ||||| || |||||||||||||||||||| ||||||    
T  51224906 aaatgatatttgtacaaccattttgctacaactttttgacaactttctctctcatactcacat 51224844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 245
Target Start/End: Original strand, 56025259 - 56025321
Alignment:
Q  184 aaatgatatttgtacaacc-tcttgtaacaaccttatgacaactttctctctcataatcacat 245  Q
    ||||||||||||||||||| | |||  ||||| || |||||||||||||||||||| ||||||    
T  56025259 aaatgatatttgtacaaccattttgctacaactttttgacaactttctctctcatactcacat 56025321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 247
Target Start/End: Complemental strand, 3078976 - 3078911
Alignment:
Q  184 aaatgatatttgtacaacc-tcttgtaacaacctta-tgacaactttctctctcataatcacatat 247  Q
    ||||||||||||||||| | | |||||||||| ||  |||||||||||||||||||| ||||||||    
T  3078976 aaatgatatttgtacaatcattttgtaacaacttttgtgacaactttctctctcatactcacatat 3078911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 238
Target Start/End: Original strand, 3286815 - 3286876
Alignment:
Q  178 aaagaaaaatgatatttgtacaacctcttgtaacaac-cttatgacaactttctctctcata 238  Q
    ||||| |||||||||||||||||||  ||||||||||  || || |||||||||||||||||    
T  3286815 aaagagaaatgatatttgtacaaccatttgtaacaacatttttgtcaactttctctctcata 3286876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 243
Target Start/End: Complemental strand, 40629408 - 40629348
Alignment:
Q  184 aaatgatatttgtacaacc-tcttgtaacaaccttatgacaactttctctctcataatcac 243  Q
    ||||||||||||||||||  | |||||| ||||||  ||||||||||||||||||| ||||    
T  40629408 aaatgatatttgtacaactattttgtaataacctttggacaactttctctctcatactcac 40629348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 245
Target Start/End: Complemental strand, 47519794 - 47519726
Alignment:
Q  178 aaagaaaaatgatatttgtacaacc-tcttgtaacaaccttatgacaactttctctctcataatcacat 245  Q
    ||||| |||||||||||||||| || | |||||||||| ||   |||||||||||||||||| ||||||    
T  47519794 aaagataaatgatatttgtacatccattttgtaacaacttttgaacaactttctctctcatactcacat 47519726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 245
Target Start/End: Original strand, 48722066 - 48722134
Alignment:
Q  178 aaagaaaaatgatatttgtacaacc-tcttgtaacaaccttatgacaactttctctctcataatcacat 245  Q
    ||||| |||||||||||||||| || | ||| |||||| || |||||| ||||||||||||| ||||||    
T  48722066 aaagagaaatgatatttgtacatccattttgcaacaactttttgacaattttctctctcatactcacat 48722134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 245
Target Start/End: Original strand, 48743707 - 48743775
Alignment:
Q  178 aaagaaaaatgatatttgtacaacc-tcttgtaacaaccttatgacaactttctctctcataatcacat 245  Q
    |||||||||||||||||||||||||   || ||||||  || |||||| ||||||||||||| ||||||    
T  48743707 aaagaaaaatgatatttgtacaaccaatttttaacaattttttgacaattttctctctcatactcacat 48743775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 245
Target Start/End: Complemental strand, 49768943 - 49768875
Alignment:
Q  178 aaagaaaaatgatatttgtacaacc-tcttgtaacaaccttatgacaactttctctctcataatcacat 245  Q
    ||||| |||||||||||||||| || | ||| |||||  || |||||||||||||||||||| ||||||    
T  49768943 aaagagaaatgatatttgtacatccattttgcaacaattttttgacaactttctctctcatactcacat 49768875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 184 - 245
Target Start/End: Original strand, 4432317 - 4432379
Alignment:
Q  184 aaatgatatttgtacaacc-tcttgtaacaaccttatgacaactttctctctcataatcacat 245  Q
    ||||||||||||||||||| |||||| | |||||| |||||||||||||||||||| ||||||    
T  4432317 aaatgatatttgtacaaccctcttgtgataaccttttgacaactttctctctcatattcacat 4432379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 245
Target Start/End: Complemental strand, 31635878 - 31635816
Alignment:
Q  184 aaatgatatttgtacaacc-tcttgtaacaaccttatgacaactttctctctcataatcacat 245  Q
    ||||||||||||||||||| | || ||||||| || |||||||||||||||||||| ||||||    
T  31635878 aaatgatatttgtacaaccattttctaacaactttttgacaactttctctctcatactcacat 31635816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 245
Target Start/End: Complemental strand, 7498065 - 7497997
Alignment:
Q  178 aaagaaaaatgatatttgtacaacc-tcttgtaacaaccttatgacaactttctctctcataatcacat 245  Q
    ||||| ||||||||||||||||||| | || | ||||| || |||||||||||||||||||| ||||||    
T  7498065 aaagagaaatgatatttgtacaaccattttattacaactttttgacaactttctctctcatactcacat 7497997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 179 - 245
Target Start/End: Complemental strand, 14797723 - 14797656
Alignment:
Q  179 aagaaaaatgatatttgtacaacctcttg-taacaaccttatgacaactttctctctcataatcacat 245  Q
    |||| |||||||||||||||||||  ||  ||||||| || |||||||||||||||||||| ||||||    
T  14797723 aagagaaatgatatttgtacaaccaatttctaacaactttttgacaactttctctctcatactcacat 14797656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 247
Target Start/End: Original strand, 5031921 - 5031991
Alignment:
Q  179 aagaaaaatgatatttgtacaacc-tcttgtaacaaccttat-gacaactttctctctcataatcacatat 247  Q
    |||| ||||||||||||||||||| | |||||||||| ||   ||||||||||||||||||| ||||||||    
T  5031921 aagagaaatgatatttgtacaaccattttgtaacaacttttgcgacaactttctctctcatactcacatat 5031991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 245
Target Start/End: Complemental strand, 5455521 - 5455459
Alignment:
Q  184 aaatgatatttgtacaacctctt-gtaacaaccttatgacaactttctctctcataatcacat 245  Q
    |||||||||||||||| || ||| || |||||||| |||||||||||||||| ||| ||||||    
T  5455521 aaatgatatttgtacatccactttgtgacaaccttttgacaactttctctcttatactcacat 5455459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 245
Target Start/End: Original strand, 30856810 - 30856872
Alignment:
Q  184 aaatgatatttgtacaacctctt-gtaacaaccttatgacaactttctctctcataatcacat 245  Q
    ||||||||||||||||||| ||| || ||||| ||  ||||||||||||||||||| ||||||    
T  30856810 aaatgatatttgtacaaccactttgtgacaacttttagacaactttctctctcatactcacat 30856872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 243
Target Start/End: Complemental strand, 31296919 - 31296853
Alignment:
Q  178 aaagaaaaatgatatttgtacaacc-tcttgtaacaaccttatgacaactttctctctcataatcac 243  Q
    ||||| ||||||||||||||||||| | |||| ||||| || |||||||||| ||||||||| ||||    
T  31296919 aaagagaaatgatatttgtacaaccattttgtgacaacgttttgacaactttatctctcatactcac 31296853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 245
Target Start/End: Complemental strand, 36376917 - 36376855
Alignment:
Q  184 aaatgatatttgtacaacctcttgta-acaaccttatgacaactttctctctcataatcacat 245  Q
    ||||||||||||||||||| ||| |  ||||| || |||||||||||||||||||| ||||||    
T  36376917 aaatgatatttgtacaaccacttttgtacaacattttgacaactttctctctcatattcacat 36376855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 245
Target Start/End: Original strand, 1889144 - 1889212
Alignment:
Q  178 aaagaaaaatgatatttgtacaacctcttg-taacaaccttatgacaactttctctctcataatcacat 245  Q
    ||||| ||||||||||||||||||| |||  | ||||  || |||||||||||||||||||| ||||||    
T  1889144 aaagagaaatgatatttgtacaaccactttctgacaattttttgacaactttctctctcatactcacat 1889212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 245
Target Start/End: Complemental strand, 4738646 - 4738578
Alignment:
Q  178 aaagaaaaatgatatttgtacaacctc-ttgtaacaaccttatgacaactttctctctcataatcacat 245  Q
    ||||| ||||||||||||||||||| | |||| ||||| || ||||||||| |||| ||||| ||||||    
T  4738646 aaagagaaatgatatttgtacaaccactttgtgacaactttttgacaacttcctctatcatactcacat 4738578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 245
Target Start/End: Original strand, 36132971 - 36133039
Alignment:
Q  178 aaagaaaaatgatatttgtacaacctc-ttgtaacaaccttatgacaactttctctctcataatcacat 245  Q
    ||||| ||||||||||||||||||| | |||| ||||  || |||||||||| ||||||||| ||||||    
T  36132971 aaagagaaatgatatttgtacaaccactttgtgacaattttgtgacaactttatctctcatactcacat 36133039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 245
Target Start/End: Complemental strand, 41868438 - 41868375
Alignment:
Q  184 aaatgatatttgtacaacc--tcttgtaacaaccttatgacaactttctctctcataatcacat 245  Q
    ||||||||||||||||| |  | || ||||||| || |||||||||||||||||||| ||||||    
T  41868438 aaatgatatttgtacaatcatttttttaacaactttttgacaactttctctctcatactcacat 41868375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000001; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 184 - 247
Target Start/End: Complemental strand, 10644870 - 10644805
Alignment:
Q  184 aaatgatatttgtacaacc-tcttgtaacaacctta-tgacaactttctctctcataatcacatat 247  Q
    ||||||||||||||||||| | |||||||||| ||  |||||||||||||||||||||||||||||    
T  10644870 aaatgatatttgtacaaccattttgtaacaacttttgtgacaactttctctctcataatcacatat 10644805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 184 - 244
Target Start/End: Original strand, 34970210 - 34970271
Alignment:
Q  184 aaatgatatttgtacaa-cctcttgtaacaaccttatgacaactttctctctcataatcaca 244  Q
    ||||||||||||||||| ||| |||||||||| || |||||||||||||||||||| |||||    
T  34970210 aaatgatatttgtacaatccttttgtaacaactttttgacaactttctctctcatactcaca 34970271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 178 - 245
Target Start/End: Original strand, 45101393 - 45101461
Alignment:
Q  178 aaagaaaaatgatatttgtacaacctctt-gtaacaaccttatgacaactttctctctcataatcacat 245  Q
    ||||| ||||||||||||||||||| ||| || ||||| || |||||||||||||||||||| ||||||    
T  45101393 aaagagaaatgatatttgtacaaccactttgtgacaactttttgacaactttctctctcatactcacat 45101461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 179 - 245
Target Start/End: Complemental strand, 21418665 - 21418598
Alignment:
Q  179 aagaaaaatgatatttgtacaacctcttg-taacaaccttatgacaactttctctctcataatcacat 245  Q
    |||| ||||||||||||||||||| |||  | |||||||| |||||||||||||||||||| ||||||    
T  21418665 aagagaaatgatatttgtacaaccactttctgacaaccttttgacaactttctctctcatactcacat 21418598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 180 - 245
Target Start/End: Complemental strand, 6105508 - 6105442
Alignment:
Q  180 agaaaaatgatatttgtacaacc-tcttgtaacaaccttatgacaactttctctctcataatcacat 245  Q
    ||||||||||||||||||||||| | || | ||||| || |||||||||||||||||||| ||||||    
T  6105508 agaaaaatgatatttgtacaaccatttttttacaactttttgacaactttctctctcatactcacat 6105442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 238
Target Start/End: Complemental strand, 40719717 - 40719656
Alignment:
Q  178 aaagaaaaatgatatttgtacaacc-tcttgtaacaaccttatgacaactttctctctcata 238  Q
    ||||| ||||||||||||||||||| | || |||||||||| |||||||||||| |||||||    
T  40719717 aaagagaaatgatatttgtacaaccattttctaacaaccttttgacaactttctttctcata 40719656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 245
Target Start/End: Complemental strand, 44380688 - 44380620
Alignment:
Q  178 aaagaaaaatgatatttgtacaacc-tcttgtaacaaccttatgacaactttctctctcataatcacat 245  Q
    ||||| ||||||||||||||||||| | |||| ||||||||   |||||||||||||||||| ||||||    
T  44380688 aaagagaaatgatatttgtacaaccattttgtgacaacctttaaacaactttctctctcatactcacat 44380620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 245
Target Start/End: Original strand, 12659055 - 12659117
Alignment:
Q  184 aaatgatatttgtacaacctcttgt-aacaaccttatgacaactttctctctcataatcacat 245  Q
    |||||||||||||||||||  || | |||||| || |||||||||||||||||||| ||||||    
T  12659055 aaatgatatttgtacaaccaatttttaacaactttttgacaactttctctctcatactcacat 12659117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 245
Target Start/End: Original strand, 29509269 - 29509331
Alignment:
Q  184 aaatgatatttgtacaacc-tcttgtaacaaccttatgacaactttctctctcataatcacat 245  Q
    ||||||||||||||||||| | |||  ||||| || |||||||||||||||||||| ||||||    
T  29509269 aaatgatatttgtacaaccattttgctacaactttttgacaactttctctctcatactcacat 29509331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 237
Target Start/End: Complemental strand, 35937580 - 35937526
Alignment:
Q  184 aaatgatatttgtacaacc-tcttgtaacaaccttatgacaactttctctctcat 237  Q
    ||||||||||||||||||| | |||||||||| ||  ||||||||||||||||||    
T  35937580 aaatgatatttgtacaaccattttgtaacaacttttggacaactttctctctcat 35937526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 244
Target Start/End: Original strand, 31806302 - 31806363
Alignment:
Q  184 aaatgatatttgtacaacc-tcttgtaacaaccttatgacaactttctctctcataatcaca 244  Q
    ||||||||||||||||||| | || ||||||  || |||||||||||||||||||| |||||    
T  31806302 aaatgatatttgtacaaccattttctaacaattttttgacaactttctctctcatattcaca 31806363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 245
Target Start/End: Original strand, 7678729 - 7678797
Alignment:
Q  178 aaagaaaaatgatatttgtacaacctc-ttgtaacaaccttatgacaactttctctctcataatcacat 245  Q
    ||||| ||||||||||||||||||| | || | ||||| || |||||| ||||||||||||| ||||||    
T  7678729 aaagagaaatgatatttgtacaaccactttttgacaactttgtgacaattttctctctcatactcacat 7678797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 245
Target Start/End: Complemental strand, 12045727 - 12045659
Alignment:
Q  178 aaagaaaaatgatatttgtacaacctctt-gtaacaaccttatgacaactttctctctcataatcacat 245  Q
    ||||| |||||||||||||||||||  || || ||||| ||  ||||||||||||||||||| ||||||    
T  12045727 aaagagaaatgatatttgtacaaccatttagtgacaacttttagacaactttctctctcatactcacat 12045659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000002; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 179 - 245
Target Start/End: Complemental strand, 28965913 - 28965846
Alignment:
Q  179 aagaaaaatgatatttgtacaacc-tcttgtaacaaccttatgacaactttctctctcataatcacat 245  Q
    |||| ||||||||||||||||||| | |||| ||||| || |||||||||||||||||||| ||||||    
T  28965913 aagagaaatgatatttgtacaaccattttgttacaactttttgacaactttctctctcatactcacat 28965846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 245
Target Start/End: Complemental strand, 237472 - 237404
Alignment:
Q  178 aaagaaaaatgatatttgtacaacc-tcttgtaacaaccttatgacaactttctctctcataatcacat 245  Q
    ||||| ||||||||||||||||||| |||||| |  || || |||||||||||||||||||| ||||||    
T  237472 aaagagaaatgatatttgtacaaccatcttgtgattactttttgacaactttctctctcatactcacat 237404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 243
Target Start/End: Original strand, 17835615 - 17835675
Alignment:
Q  184 aaatgatatttgtacaacc-tcttgtaacaaccttatgacaactttctctctcataatcac 243  Q
    ||||||||||||||||||| | || ||||||| || |||||||||||||||||||| ||||    
T  17835615 aaatgatatttgtacaacccttttctaacaactttttgacaactttctctctcatactcac 17835675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 179 - 245
Target Start/End: Complemental strand, 8778945 - 8778878
Alignment:
Q  179 aagaaaaatgatatttgtacaacc-tcttgtaacaaccttatgacaactttctctctcataatcacat 245  Q
    |||| ||||||||||||||||||| | || ||||||| || ||||||||||||||| |||| ||||||    
T  8778945 aagagaaatgatatttgtacaaccattttttaacaactttttgacaactttctctcacatactcacat 8778878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 179 - 245
Target Start/End: Complemental strand, 19789149 - 19789082
Alignment:
Q  179 aagaaaaatgatatttgtacaacc-tcttgtaacaaccttatgacaactttctctctcataatcacat 245  Q
    |||| ||||||||||||||||||| | || | ||||| || |||||||||||||||||||| ||||||    
T  19789149 aagagaaatgatatttgtacaaccattttattacaactttttgacaactttctctctcatactcacat 19789082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 179 - 245
Target Start/End: Original strand, 29383555 - 29383622
Alignment:
Q  179 aagaaaaatgatatttgtacaacctcttg-taacaaccttatgacaactttctctctcataatcacat 245  Q
    |||| ||||||||||||||||||| |||  | ||||| || |||||||||||||||||||| ||||||    
T  29383555 aagagaaatgatatttgtacaaccactttctgacaactttttgacaactttctctctcatactcacat 29383622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 245
Target Start/End: Original strand, 8395345 - 8395407
Alignment:
Q  184 aaatgatatttgtacaacctcttg-taacaaccttatgacaactttctctctcataatcacat 245  Q
    ||||||||||||||||||| |||  | ||||| || |||||||||||||||||||| ||||||    
T  8395345 aaatgatatttgtacaaccactttctcacaactttttgacaactttctctctcatactcacat 8395407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 245
Target Start/End: Original strand, 21506339 - 21506401
Alignment:
Q  184 aaatgatatttgtacaacc-tcttgtaacaaccttatgacaactttctctctcataatcacat 245  Q
    ||||||||||||||||||| | || | ||||| || |||||||||||||||||||| ||||||    
T  21506339 aaatgatatttgtacaaccattttttgacaactttttgacaactttctctctcatactcacat 21506401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 245
Target Start/End: Complemental strand, 25924932 - 25924870
Alignment:
Q  184 aaatgatatttgtacaacc-tcttgtaacaaccttatgacaactttctctctcataatcacat 245  Q
    ||||||||||||||||||| | |||  ||||| || |||||||||||||||||||| ||||||    
T  25924932 aaatgatatttgtacaaccattttgctacaactttttgacaactttctctctcatactcacat 25924870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 247
Target Start/End: Complemental strand, 34570663 - 34570598
Alignment:
Q  184 aaatgatatttgtacaacc-tcttgtaacaacctta-tgacaactttctctctcataatcacatat 247  Q
    ||||||||||||||||||| | |||||| ||| ||  |||||||||||||||||||| ||||||||    
T  34570663 aaatgatatttgtacaaccattttgtaataacttttgtgacaactttctctctcatactcacatat 34570598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 245
Target Start/End: Complemental strand, 3339573 - 3339505
Alignment:
Q  178 aaagaaaaatgatatttgtacaacc-tcttgtaacaaccttatgacaactttctctctcataatcacat 245  Q
    ||||| ||||||||||||||||||| | |||| ||||| ||   |||||||||||||||||| ||||||    
T  3339573 aaagagaaatgatatttgtacaaccattttgtgacaacttttgtacaactttctctctcatactcacat 3339505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 245
Target Start/End: Original strand, 11785352 - 11785420
Alignment:
Q  178 aaagaaaaatgatatttgtacaacc-tcttgtaacaaccttatgacaactttctctctcataatcacat 245  Q
    ||||| ||||||||||||||||||| | |||| ||||  || |||||||||||| ||||||| ||||||    
T  11785352 aaagagaaatgatatttgtacaaccattttgtgacaattttttgacaactttctatctcatattcacat 11785420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 245
Target Start/End: Complemental strand, 15722577 - 15722509
Alignment:
Q  178 aaagaaaaatgatatttgtacaacc-tcttgtaacaaccttatgacaactttctctctcataatcacat 245  Q
    ||||| ||||||||||||||||| | | |||| ||||| || ||||||| |||||||||||| ||||||    
T  15722577 aaagagaaatgatatttgtacaatcattttgtgacaactttttgacaaccttctctctcatactcacat 15722509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 28883816 - 28883764
Alignment:
Q  184 aaatgatatttgtacaacc-tcttgtaacaaccttatgacaactttctctctc 235  Q
    ||||||||||||||||||| | || ||| |||||| |||||||||||||||||    
T  28883816 aaatgatatttgtacaaccattttttaataaccttttgacaactttctctctc 28883764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 216 - 248
Target Start/End: Original strand, 29467390 - 29467422
Alignment:
Q  216 ttatgacaactttctctctcataatcacatatt 248  Q
    ||||||||||||||||||||||| |||||||||    
T  29467390 ttatgacaactttctctctcatagtcacatatt 29467422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 35; Significance: 0.00000000009; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 245
Target Start/End: Original strand, 2790180 - 2790242
Alignment:
Q  184 aaatgatatttgtacaacctctt-gtaacaaccttatgacaactttctctctcataatcacat 245  Q
    ||||||||||||||||||| ||| |||||||  || |||||||||||||||||||| ||||||    
T  2790180 aaatgatatttgtacaaccactttgtaacaattttttgacaactttctctctcatactcacat 2790242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 245
Target Start/End: Original strand, 19426583 - 19426645
Alignment:
Q  184 aaatgatatttgtacaacc-tcttgtaacaaccttatgacaactttctctctcataatcacat 245  Q
    ||||||||||||||||||| | |||| ||||| || |||||||||||||||||||| ||||||    
T  19426583 aaatgatatttgtacaaccattttgtgacaactttttgacaactttctctctcatactcacat 19426645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 245
Target Start/End: Original strand, 20406544 - 20406606
Alignment:
Q  184 aaatgatatttgtacaacc-tcttgtaacaaccttatgacaactttctctctcataatcacat 245  Q
    ||||||||||||||||||| |||||| ||||| || |||||||||||| ||||||| ||||||    
T  20406544 aaatgatatttgtacaaccatcttgtgacaactttttgacaactttctttctcatactcacat 20406606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 245
Target Start/End: Original strand, 28824500 - 28824568
Alignment:
Q  178 aaagaaaaatgatatttgtacaacctcttg-taacaaccttatgacaactttctctctcataatcacat 245  Q
    ||||| ||||||||||||||||||| |||  | ||||| || |||||||||||||||||||| ||||||    
T  28824500 aaagagaaatgatatttgtacaaccactttctgacaactttttgacaactttctctctcatattcacat 28824568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 182 - 247
Target Start/End: Complemental strand, 1471361 - 1471294
Alignment:
Q  182 aaaaatgatatttgtacaacc-tcttgtaacaacctta-tgacaactttctctctcataatcacatat 247  Q
    ||||| ||||||||||||||| | |||||||||| ||  |||||||||||||||||||| ||||||||    
T  1471361 aaaaaagatatttgtacaaccattttgtaacaacttttgtgacaactttctctctcatactcacatat 1471294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 179 - 245
Target Start/End: Original strand, 5378625 - 5378692
Alignment:
Q  179 aagaaaaatgatatttgtacaacctcttgta-acaaccttatgacaactttctctctcataatcacat 245  Q
    |||| |||||||||||||||||||  || || ||||| || |||||||||||||||||||| ||||||    
T  5378625 aagagaaatgatatttgtacaaccatttttatacaactttttgacaactttctctctcatactcacat 5378692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 179 - 245
Target Start/End: Original strand, 9055265 - 9055332
Alignment:
Q  179 aagaaaaatgatatttgtacaacctcttg-taacaaccttatgacaactttctctctcataatcacat 245  Q
    |||| |||||||||||||||||||  ||  ||||||| || |||||||||||||||||||| ||||||    
T  9055265 aagagaaatgatatttgtacaaccaatttctaacaactttttgacaactttctctctcatactcacat 9055332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 178 - 247
Target Start/End: Original strand, 46829476 - 46829547
Alignment:
Q  178 aaagaaaaatgatatttgtacaacc-tcttgtaacaacctta-tgacaactttctctctcataatcacatat 247  Q
    ||||| ||||||||||||||||||| | |||||||||  ||  |||||||||||||||||||| ||||||||    
T  46829476 aaagagaaatgatatttgtacaaccattttgtaacaatttttgtgacaactttctctctcatactcacatat 46829547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 245
Target Start/End: Original strand, 40842408 - 40842470
Alignment:
Q  184 aaatgatatttgtacaacctctt-gtaacaaccttatgacaactttctctctcataatcacat 245  Q
    |||||||||||||||| || ||| || |||| ||| |||||||||||||||||||| ||||||    
T  40842408 aaatgatatttgtacatccactttgtgacaatcttttgacaactttctctctcatactcacat 40842470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 245
Target Start/End: Complemental strand, 30769727 - 30769667
Alignment:
Q  184 aaatgatatttgtacaacctcttgtaacaaccttatgacaactttctctctcataatcacat 245  Q
    ||||||||||||||||| || || ||||||| || |||||||||| ||||||||| ||||||    
T  30769727 aaatgatatttgtacaa-ctattttaacaactttttgacaactttatctctcatactcacat 30769667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 245
Target Start/End: Original strand, 33684677 - 33684745
Alignment:
Q  178 aaagaaaaatgatatttgtacaacctc-ttgtaacaaccttatgacaactttctctctcataatcacat 245  Q
    ||||| ||||||||||||||||||| | || | ||||| || | |||||||||||||||||| ||||||    
T  33684677 aaagagaaatgatatttgtacaaccactttctcacaacttttttacaactttctctctcatactcacat 33684745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 238
Target Start/End: Original strand, 36920801 - 36920861
Alignment:
Q  178 aaagaaaaatgatatttgtacaacctcttgtaacaaccttatgacaactttctctctcata 238  Q
    ||||| ||||||||||||||| |||  || ||||||  || ||||||||||||||||||||    
T  36920801 aaagagaaatgatatttgtactaccatttttaacaattttttgacaactttctctctcata 36920861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 35; Significance: 0.00000000009; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 179 - 244
Target Start/End: Complemental strand, 11335375 - 11335309
Alignment:
Q  179 aagaaaaatgatatttgtacaacc-tcttgtaacaaccttatgacaactttctctctcataatcaca 244  Q
    |||| ||||||||||||||||||| | || ||||||| || |||||||||||||||||||| |||||    
T  11335375 aagagaaatgatatttgtacaaccattttctaacaactttttgacaactttctctctcatattcaca 11335309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 245
Target Start/End: Original strand, 14207378 - 14207440
Alignment:
Q  184 aaatgatatttgtacaacctctt-gtaacaaccttatgacaactttctctctcataatcacat 245  Q
    ||||||||||||||||||| ||| || | |||||| |||||||||||||||||||| ||||||    
T  14207378 aaatgatatttgtacaaccactttgtgataaccttttgacaactttctctctcatactcacat 14207440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 245
Target Start/End: Original strand, 14215126 - 14215188
Alignment:
Q  184 aaatgatatttgtacaacctctt-gtaacaaccttatgacaactttctctctcataatcacat 245  Q
    ||||||||||||||||||| ||| || | |||||| |||||||||||||||||||| ||||||    
T  14215126 aaatgatatttgtacaaccactttgtgataaccttttgacaactttctctctcatactcacat 14215188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 245
Target Start/End: Original strand, 48649583 - 48649645
Alignment:
Q  184 aaatgatatttgtacaacctcttg-taacaaccttatgacaactttctctctcataatcacat 245  Q
    ||||||||||||||||||| |||  ||||||| || |||||||||||||||||||| ||||||    
T  48649583 aaatgatatttgtacaaccactttctaacaactttttgacaactttctctctcatactcacat 48649645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 247
Target Start/End: Complemental strand, 29573424 - 29573359
Alignment:
Q  184 aaatgatatttgtacaacc-tcttgtaacaacctta-tgacaactttctctctcataatcacatat 247  Q
    ||||||||||||||||||| | |||||||||| ||  |||||||||||||||||||| ||||||||    
T  29573424 aaatgatatttgtacaaccattttgtaacaacttttgtgacaactttctctctcatactcacatat 29573359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 245
Target Start/End: Complemental strand, 1902000 - 1901932
Alignment:
Q  178 aaagaaaaatgatatttgtacaacctctt-gtaacaaccttatgacaactttctctctcataatcacat 245  Q
    ||||| ||||||||||||||||||| ||| || ||||| ||  ||||||||||||||||||| ||||||    
T  1902000 aaagagaaatgatatttgtacaaccactttgtgacaacttttagacaactttctctctcatactcacat 1901932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 245
Target Start/End: Complemental strand, 1911446 - 1911378
Alignment:
Q  178 aaagaaaaatgatatttgtacaacctctt-gtaacaaccttatgacaactttctctctcataatcacat 245  Q
    ||||| ||||||||||||||||||| ||| || ||||| ||  ||||||||||||||||||| ||||||    
T  1911446 aaagagaaatgatatttgtacaaccactttgtgacaacttttagacaactttctctctcatactcacat 1911378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 245
Target Start/End: Original strand, 26279881 - 26279949
Alignment:
Q  178 aaagaaaaatgatatttgtacaacctcttg-taacaaccttatgacaactttctctctcataatcacat 245  Q
    ||||| ||||||||||||||||||| |||  | ||||| || |||||||||||||||||||| ||||||    
T  26279881 aaagagaaatgatatttgtacaaccactttctgacaactttttgacaactttctctctcatactcacat 26279949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 238
Target Start/End: Original strand, 35272021 - 35272085
Alignment:
Q  175 atgaaagaaaaatgatatttgtacaacctc-ttgtaacaaccttatgacaactttctctctcata 238  Q
    |||||||| ||||||||||||||||||| | |||| |||||||| |||||||||| ||| |||||    
T  35272021 atgaaagagaaatgatatttgtacaaccactttgtgacaaccttttgacaactttatctttcata 35272085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 245
Target Start/End: Complemental strand, 43900835 - 43900763
Alignment:
Q  174 tatgaaagaaaaatgatatttgtacaacctcttg-taacaaccttatgacaactttctctctcataatcacat 245  Q
    ||||| ||| ||||||||||||||||||| |||  | ||||| || |||||||||||||||||||| ||||||    
T  43900835 tatgagagagaaatgatatttgtacaaccactttattacaactttttgacaactttctctctcatactcacat 43900763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 245
Target Start/End: Original strand, 49196693 - 49196761
Alignment:
Q  178 aaagaaaaatgatatttgtacaacc-tcttgtaacaaccttatgacaactttctctctcataatcacat 245  Q
    ||||| ||||||||||||||||||| | |||| ||||| || |||||| ||||||||||||| ||||||    
T  49196693 aaagagaaatgatatttgtacaaccattttgtgacaactttgtgacaattttctctctcatactcacat 49196761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 179 - 245
Target Start/End: Original strand, 108429 - 108496
Alignment:
Q  179 aagaaaaatgatatttgtacaacctctt-gtaacaaccttatgacaactttctctctcataatcacat 245  Q
    |||| ||||||||||||||||||| ||| || ||||  || |||||||||||||||||||| ||||||    
T  108429 aagagaaatgatatttgtacaaccactttgtgacaattttttgacaactttctctctcatactcacat 108496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 179 - 245
Target Start/End: Original strand, 43176200 - 43176267
Alignment:
Q  179 aagaaaaatgatatttgtacaacctctt-gtaacaaccttatgacaactttctctctcataatcacat 245  Q
    |||| ||||||||||||||||||| ||| || ||||  ||||||||||||| ||||||||| ||||||    
T  43176200 aagagaaatgatatttgtacaaccactttgttacaattttatgacaactttatctctcatactcacat 43176267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 245
Target Start/End: Complemental strand, 32457823 - 32457761
Alignment:
Q  184 aaatgatatttgtacaacctcttgta-acaaccttatgacaactttctctctcataatcacat 245  Q
    ||||||||||||||||||| ||| |  ||||| || |||||||||||||||||||| ||||||    
T  32457823 aaatgatatttgtacaaccactttttgacaactttgtgacaactttctctctcatactcacat 32457761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 245
Target Start/End: Complemental strand, 37303142 - 37303080
Alignment:
Q  184 aaatgatatttgtacaacctcttg-taacaaccttatgacaactttctctctcataatcacat 245  Q
    ||||||||||||||||||| |||  | ||||| || |||||||||||||||||||| ||||||    
T  37303142 aaatgatatttgtacaaccactttctcacaactttttgacaactttctctctcatactcacat 37303080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 245
Target Start/End: Original strand, 39540234 - 39540300
Alignment:
Q  180 agaaaaatgatatttgtacaacctc-ttgtaacaaccttatgacaactttctctctcataatcacat 245  Q
    ||||||||||||||||||||||| | || | ||||| || |||||| ||||||||||||| ||||||    
T  39540234 agaaaaatgatatttgtacaaccactttctcacaactttttgacaattttctctctcatactcacat 39540300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 245
Target Start/End: Complemental strand, 41877679 - 41877617
Alignment:
Q  184 aaatgatatttgtacaacctc-ttgtaacaaccttatgacaactttctctctcataatcacat 245  Q
    ||||||||||||||||||| | |||| ||| |||| |||||||||| ||||||||| ||||||    
T  41877679 aaatgatatttgtacaaccactttgtgacacccttttgacaactttttctctcatactcacat 41877617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 245
Target Start/End: Original strand, 41877691 - 41877753
Alignment:
Q  184 aaatgatatttgtacaacc-tcttgtaacaaccttatgacaactttctctctcataatcacat 245  Q
    ||||||||||||||||||| | |||  ||||| || |||||||||||||||||||| ||||||    
T  41877691 aaatgatatttgtacaaccattttgctacaactttttgacaactttctctctcatactcacat 41877753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 245
Target Start/End: Complemental strand, 44334869 - 44334807
Alignment:
Q  184 aaatgatatttgtacaacctcttg-taacaaccttatgacaactttctctctcataatcacat 245  Q
    ||||||||||||||||||| |||  | ||||| || |||||||||||||||||||| ||||||    
T  44334869 aaatgatatttgtacaaccactttattacaactttttgacaactttctctctcatactcacat 44334807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 245
Target Start/End: Complemental strand, 47988553 - 47988491
Alignment:
Q  184 aaatgatatttgtacaacc-tcttgtaacaaccttatgacaactttctctctcataatcacat 245  Q
    ||||||||||||||||||  | || ||||||| || |||||||||||||||||||| ||||||    
T  47988553 aaatgatatttgtacaactattttctaacaactttttgacaactttctctctcatactcacat 47988491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 245
Target Start/End: Complemental strand, 47997840 - 47997778
Alignment:
Q  184 aaatgatatttgtacaacc-tcttgtaacaaccttatgacaactttctctctcataatcacat 245  Q
    ||||||||||||||||||  | || ||||||| || |||||||||||||||||||| ||||||    
T  47997840 aaatgatatttgtacaactattttctaacaactttttgacaactttctctctcatactcacat 47997778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 245
Target Start/End: Complemental strand, 48007127 - 48007065
Alignment:
Q  184 aaatgatatttgtacaacc-tcttgtaacaaccttatgacaactttctctctcataatcacat 245  Q
    ||||||||||||||||||  | || ||||||| || |||||||||||||||||||| ||||||    
T  48007127 aaatgatatttgtacaactattttctaacaactttttgacaactttctctctcatactcacat 48007065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 245
Target Start/End: Complemental strand, 51032692 - 51032630
Alignment:
Q  184 aaatgatatttgtacaacc-tcttgtaacaaccttatgacaactttctctctcataatcacat 245  Q
    ||||||||||||||||||| | || ||||||| || |||||| ||||||||||||| ||||||    
T  51032692 aaatgatatttgtacaaccattttctaacaactttttgacaattttctctctcatactcacat 51032630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 245
Target Start/End: Complemental strand, 51464340 - 51464278
Alignment:
Q  184 aaatgatatttgtacaacctc-ttgtaacaaccttatgacaactttctctctcataatcacat 245  Q
    ||||||||||||||||||| | |||| ||||| || |||||||||| ||||||||| ||||||    
T  51464340 aaatgatatttgtacaaccactttgtgacaactttttgacaactttatctctcatactcacat 51464278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 244
Target Start/End: Original strand, 8066358 - 8066419
Alignment:
Q  184 aaatgatatttgtacaacctcttg-taacaaccttatgacaactttctctctcataatcaca 244  Q
    ||||||||||||||||||| |||  | ||||| || |||||||||||||||||||| |||||    
T  8066358 aaatgatatttgtacaaccactttctcacaactttttgacaactttctctctcatactcaca 8066419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 238
Target Start/End: Original strand, 18169154 - 18169215
Alignment:
Q  178 aaagaaaaatgatatttgtacaacctc-ttgtaacaaccttatgacaactttctctctcata 238  Q
    ||||| ||||||||||||||||||| | |||| ||||| || |||||| |||||||||||||    
T  18169154 aaagagaaatgatatttgtacaaccactttgtgacaactttttgacaaatttctctctcata 18169215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 245
Target Start/End: Complemental strand, 37894317 - 37894248
Alignment:
Q  178 aaagaaaaatgatatttgtacaacc-tcttgtaacaacctta-tgacaactttctctctcataatcacat 245  Q
    ||||| ||||||||||||||||||| | || ||||||| ||  |||||||||||||||||||| ||||||    
T  37894317 aaagagaaatgatatttgtacaaccattttctaacaacttttgtgacaactttctctctcatactcacat 37894248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 243
Target Start/End: Complemental strand, 462469 - 462409
Alignment:
Q  184 aaatgatatttgtacaacc-tcttgtaacaaccttatgacaactttctctctcataatcac 243  Q
    ||||||||||||||||||| | |||| ||||| ||  ||||||||||||||||||| ||||    
T  462469 aaatgatatttgtacaaccattttgtgacaacttttagacaactttctctctcatactcac 462409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 245
Target Start/End: Original strand, 8254024 - 8254092
Alignment:
Q  178 aaagaaaaatgatatttgtacaacc-tcttgtaacaaccttatgacaactttctctctcataatcacat 245  Q
    ||||| ||||||||||||||||||| | |||| ||||| ||   |||||||||||||||||| ||||||    
T  8254024 aaagagaaatgatatttgtacaaccattttgtgacaactttggtacaactttctctctcatactcacat 8254092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 243
Target Start/End: Complemental strand, 20380957 - 20380897
Alignment:
Q  184 aaatgatatttgtacaacctctt-gtaacaaccttatgacaactttctctctcataatcac 243  Q
    ||||||||||||||||||| ||| || ||||| |  |||||||||||||||||||| ||||    
T  20380957 aaatgatatttgtacaaccactttgtgacaacttcttgacaactttctctctcatactcac 20380897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 245
Target Start/End: Original strand, 21579111 - 21579179
Alignment:
Q  178 aaagaaaaatgatatttgtacaacctcttg-taacaaccttatgacaactttctctctcataatcacat 245  Q
    ||||| ||||||||||| |||||||  ||  ||||||| ||||||||| ||||||||||||| ||||||    
T  21579111 aaagagaaatgatatttatacaaccaatttctaacaactttatgacaattttctctctcatactcacat 21579179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 245
Target Start/End: Original strand, 22813069 - 22813137
Alignment:
Q  178 aaagaaaaatgatatttgtacaacctc-ttgtaacaaccttatgacaactttctctctcataatcacat 245  Q
    ||||| ||||||||||||||||||| | || | ||||| || ||||||||||||||| |||| ||||||    
T  22813069 aaagagaaatgatatttgtacaaccactttctgacaactttttgacaactttctctcccatattcacat 22813137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 245
Target Start/End: Complemental strand, 27162543 - 27162475
Alignment:
Q  178 aaagaaaaatgatatttgtacaacc-tcttgtaacaaccttatgacaactttctctctcataatcacat 245  Q
    ||||| || |||||||||||||||| | |||||||||| ||   |||||||||||||||||| ||||||    
T  27162543 aaagagaagtgatatttgtacaaccattttgtaacaacttttgaacaactttctctctcatactcacat 27162475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 238
Target Start/End: Original strand, 29525867 - 29525923
Alignment:
Q  184 aaatgatatttgtacaacc-tcttgtaacaac-cttatgacaactttctctctcata 238  Q
    |||||||||||| |||||| |||| ||||||  ||||||||||||||||||||||||    
T  29525867 aaatgatatttgaacaaccatcttttaacaattcttatgacaactttctctctcata 29525923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 245
Target Start/End: Original strand, 32187143 - 32187207
Alignment:
Q  183 aaaatgatatttgtacaacc-tcttgtaacaacctt-atgacaactttctctctcataatcacat 245  Q
    |||||||||||||||||||| | |||| ||||| || |||||||| |||||||||||| ||||||    
T  32187143 aaaatgatatttgtacaaccattttgtgacaacttttatgacaaccttctctctcatattcacat 32187207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 243
Target Start/End: Complemental strand, 34271558 - 34271498
Alignment:
Q  184 aaatgatatttgtacaacctctt-gtaacaaccttatgacaactttctctctcataatcac 243  Q
    ||||||||||||||||||| ||| |||||||| || ||| ||||||||||| |||| ||||    
T  34271558 aaatgatatttgtacaaccactttgtaacaactttttgataactttctctcacatactcac 34271498  T

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Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 245
Target Start/End: Complemental strand, 40159912 - 40159844
Alignment:
Q  178 aaagaaaaatgatatttgtacaacc-tcttgtaacaaccttatgacaactttctctctcataatcacat 245  Q
    ||||| ||||||||||||||||||  | || ||||||| || |||||||||||||||||| | ||||||    
T  40159912 aaagagaaatgatatttgtacaactattttctaacaactttttgacaactttctctctcagactcacat 40159844  T

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Target: chr1 (Bit Score: 35; Significance: 0.00000000009; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 245
Target Start/End: Complemental strand, 18541119 - 18541057
Alignment:
Q  184 aaatgatatttgtacaacc-tcttgtaacaaccttatgacaactttctctctcataatcacat 245  Q
    ||||||||||||||||||| | || ||||||| || |||||||||||||||||||| ||||||    
T  18541119 aaatgatatttgtacaaccattttctaacaactttttgacaactttctctctcatattcacat 18541057  T

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Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 238
Target Start/End: Original strand, 29877300 - 29877356
Alignment:
Q  184 aaatgatatttgtacaacc-tcttgtaacaac-cttatgacaactttctctctcata 238  Q
    ||||||||||||||||||| | || ||||||| ||||||||||||||||||||||||    
T  29877300 aaatgatatttgtacaaccattttctaacaactcttatgacaactttctctctcata 29877356  T

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Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 238
Target Start/End: Complemental strand, 50226952 - 50226892
Alignment:
Q  179 aagaaaaatgatatttgtacaacctctt-gtaacaaccttatgacaactttctctctcata 238  Q
    |||| ||||||||||||||||||| ||| || ||||| || ||||||||||||||||||||    
T  50226952 aagagaaatgatatttgtacaaccactttgtgacaactttttgacaactttctctctcata 50226892  T

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Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 179 - 245
Target Start/End: Complemental strand, 2257767 - 2257700
Alignment:
Q  179 aagaaaaatgatatttgtacaacc-tcttgtaacaaccttatgacaactttctctctcataatcacat 245  Q
    |||||||||||||||||||||||| | |||  ||||| || | |||||||||||||||||| ||||||    
T  2257767 aagaaaaatgatatttgtacaaccattttgctacaactttttaacaactttctctctcatactcacat 2257700  T

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Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 172 - 238
Target Start/End: Complemental strand, 49189288 - 49189221
Alignment:
Q  172 tttatgaaagaaaaatgatatttgtacaacc-tcttgtaacaaccttatgacaactttctctctcata 238  Q
    ||||||||||| ||||||||||||||||||| | |||  ||||| || |||||||||||| |||||||    
T  49189288 tttatgaaagagaaatgatatttgtacaaccattttgctacaactttttgacaactttctttctcata 49189221  T

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Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 245
Target Start/End: Original strand, 9445111 - 9445173
Alignment:
Q  184 aaatgatatttgtacaacc-tcttgtaacaaccttatgacaactttctctctcataatcacat 245  Q
    |||||||||| |||||||| | |||||||||| || |||||||||||||| ||||| ||||||    
T  9445111 aaatgatattcgtacaaccattttgtaacaactttttgacaactttctctttcatactcacat 9445173  T

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Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 245
Target Start/End: Original strand, 16658441 - 16658503
Alignment:
Q  184 aaatgatatttgtacaacctc-ttgtaacaaccttatgacaactttctctctcataatcacat 245  Q
    ||||||||||||||||||| | |||| ||||| ||  ||||||||||||||||||| ||||||    
T  16658441 aaatgatatttgtacaaccacattgtgacaacttttagacaactttctctctcatactcacat 16658503  T

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Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 245
Target Start/End: Complemental strand, 25098856 - 25098794
Alignment:
Q  184 aaatgatatttgtacaacctctt-gtaacaaccttatgacaactttctctctcataatcacat 245  Q
    ||||||||||||||||||| ||| |||||||| ||  |||||| |||||||||||| ||||||    
T  25098856 aaatgatatttgtacaaccactttgtaacaacttttagacaaccttctctctcatactcacat 25098794  T

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Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 245
Target Start/End: Complemental strand, 27810315 - 27810253
Alignment:
Q  184 aaatgatatttgtacaacctcttg-taacaaccttatgacaactttctctctcataatcacat 245  Q
    |||||||||||||||||||  ||  ||||||| || |||||||||||||||||||| ||||||    
T  27810315 aaatgatatttgtacaaccaatttctaacaactttttgacaactttctctctcatactcacat 27810253  T

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Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 245
Target Start/End: Complemental strand, 51339768 - 51339706
Alignment:
Q  184 aaatgatatttgtacaacctctt-gtaacaaccttatgacaactttctctctcataatcacat 245  Q
    ||||||||||||||||||| ||| |||||||| ||  ||||||||||| ||||||| ||||||    
T  51339768 aaatgatatttgtacaaccactttgtaacaacttttagacaactttctttctcatactcacat 51339706  T

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Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 177 - 245
Target Start/End: Original strand, 27352626 - 27352695
Alignment:
Q  177 gaaagaaaaatgatatttgtacaacc-tcttgtaacaaccttatgacaactttctctctcataatcacat 245  Q
    |||||| ||||||||||||||||||| | |||| | ||| ||  ||||||||||||||||||| ||||||    
T  27352626 gaaagagaaatgatatttgtacaaccattttgtgataacttttggacaactttctctctcatactcacat 27352695  T

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Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 177 - 245
Target Start/End: Original strand, 49596231 - 49596300
Alignment:
Q  177 gaaagaaaaatgatatttgtacaacc-tcttgtaacaaccttatgacaactttctctctcataatcacat 245  Q
    |||||| ||||||||||||||||||| | || | ||||  || |||||||||||||||||||| ||||||    
T  49596231 gaaagagaaatgatatttgtacaaccattttattacaattttttgacaactttctctctcatactcacat 49596300  T

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Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 245
Target Start/End: Original strand, 12708087 - 12708155
Alignment:
Q  178 aaagaaaaatgatatttgtacaacc-tcttgtaacaaccttatgacaactttctctctcataatcacat 245  Q
    ||||| |||||||||||||| |||| | || ||||||| || |||||| ||||||| ||||||||||||    
T  12708087 aaagagaaatgatatttgtagaaccattttctaacaactttttgacaattttctctttcataatcacat 12708155  T

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Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 245
Target Start/End: Original strand, 18610770 - 18610838
Alignment:
Q  178 aaagaaaaatgatatttgtacaacc-tcttgtaacaaccttatgacaactttctctctcataatcacat 245  Q
    ||||| ||||||||||||||||||  | |||| ||||| || | |||||||||||||||||| ||||||    
T  18610770 aaagagaaatgatatttgtacaactattttgtgacaacttttttacaactttctctctcatactcacat 18610838  T

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Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 245
Target Start/End: Complemental strand, 21433474 - 21433406
Alignment:
Q  179 aagaaaaatgatatttgtacaacc-tcttgtaacaac-cttatgacaactttctctctcataatcacat 245  Q
    |||| ||||||||||||||||||| | ||||||||||  || |||||||||||||||| ||| ||||||    
T  21433474 aagagaaatgatatttgtacaaccattttgtaacaacttttgtgacaactttctctcttatactcacat 21433406  T

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Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 245
Target Start/End: Original strand, 42256457 - 42256525
Alignment:
Q  178 aaagaaaaatgatatttgtacaacc-tcttgtaacaaccttatgacaactttctctctcataatcacat 245  Q
    ||||| ||||||||||||||||||| | |||| ||||| ||   |||||||||||||||||| ||||||    
T  42256457 aaagagaaatgatatttgtacaaccattttgtgacaactttggtacaactttctctctcatactcacat 42256525  T

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Target: scaffold0009 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 238
Target Start/End: Complemental strand, 263767 - 263708
Alignment:
Q  180 agaaaaatgatatttgtacaacctc-ttgtaacaaccttatgacaactttctctctcata 238  Q
    ||||||||||||||||||||||| | || ||||||| || | ||||||||||||||||||    
T  263767 agaaaaatgatatttgtacaaccactttctaacaactttttaacaactttctctctcata 263708  T

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Target: scaffold0003 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 245
Target Start/End: Original strand, 366297 - 366359
Alignment:
Q  184 aaatgatatttgtacaacctcttgtaacaacctta-tgacaactttctctctcataatcacat 245  Q
    |||||||||||||||||||  || ||||||| ||  |||||||||||||||||||| ||||||    
T  366297 aaatgatatttgtacaaccatttttaacaacttttgtgacaactttctctctcatattcacat 366359  T

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Target: scaffold0087 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 238
Target Start/End: Complemental strand, 27136 - 27076
Alignment:
Q  179 aagaaaaatgatatttgtacaacctcttgt-aacaaccttatgacaactttctctctcata 238  Q
    |||| |||||||||||||||||||  || | ||||| ||| ||||||||||||||||||||    
T  27136 aagagaaatgatatttgtacaaccatttcttaacaatcttttgacaactttctctctcata 27076  T

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Target: scaffold0014 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 245
Target Start/End: Original strand, 199263 - 199331
Alignment:
Q  178 aaagaaaaatgatatttgtacaacctcttg-taacaaccttatgacaactttctctctcataatcacat 245  Q
    ||||| ||||||||||||||||||| |||  | ||||  || |||||||||||||||||||| ||||||    
T  199263 aaagagaaatgatatttgtacaaccactttattacaattttttgacaactttctctctcatactcacat 199331  T

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Target: scaffold0011 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 245
Target Start/End: Complemental strand, 219738 - 219670
Alignment:
Q  178 aaagaaaaatgatatttgtacaacctc-ttgtaacaaccttatgacaactttctctctcataatcacat 245  Q
    ||||| ||||||||||||||||||| | |||| ||||| || |||||||||||| ||| ||| ||||||    
T  219738 aaagagaaatgatatttgtacaaccactttgtgacaactttttgacaactttctttcttatattcacat 219670  T

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