View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8548A_low_235 (Length: 241)
Name: NF8548A_low_235
Description: NF8548A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8548A_low_235 |
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Alignment Details
Target: chr7 (Bit Score: 156; Significance: 5e-83; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 49 - 212
Target Start/End: Complemental strand, 9457309 - 9457146
Alignment:
| Q |
49 |
gaaaatcaagattaattgtaatttataaacattttatctctcccctacacaaaacacaaacttgagatcggtaacaaaatgagtgttgagatttttatta |
148 |
Q |
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| T |
9457309 |
gaaaatcaagattaattgtaatttataaacattttatctctcccctacgcaaaacacaaacttgagatcggtaacaaaatgagtgttgagatttttatta |
9457210 |
T |
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| Q |
149 |
ccgtattccaaaatggctatatgtgatttttattacaatctaatgatcatctataaagtaaaca |
212 |
Q |
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| T |
9457209 |
ccgtattccaaaacggctatatgtgatttttattacaatctaatgatcatctataaagtaaaca |
9457146 |
T |
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