View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8548A_low_236 (Length: 241)
Name: NF8548A_low_236
Description: NF8548A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8548A_low_236 |
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Alignment Details
Target: chr4 (Bit Score: 112; Significance: 9e-57; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 76 - 187
Target Start/End: Complemental strand, 43922096 - 43921985
Alignment:
| Q |
76 |
gatgaaaatcaaggtttcaatttctatctccttttttattcatttcacctctcttattatcatcgatcgcactagaatccgtaattgcaccactagtatc |
175 |
Q |
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| T |
43922096 |
gatgaaaatcaaggtttcaatttctatctccttttttattcatttcacctctcttattatcatcgatcgcactagaatccgtaattgcaccactagtatc |
43921997 |
T |
|
| Q |
176 |
ttatcgattcta |
187 |
Q |
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|||||||||||| |
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| T |
43921996 |
ttatcgattcta |
43921985 |
T |
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