View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8548A_low_253 (Length: 236)
Name: NF8548A_low_253
Description: NF8548A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8548A_low_253 |
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Alignment Details
Target: chr7 (Bit Score: 180; Significance: 2e-97; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 41 - 224
Target Start/End: Complemental strand, 45313135 - 45312952
Alignment:
| Q |
41 |
cggtggcacacactataaacggaaggaaaaaacggtggtacacactatagacggaaggttccaatgcattatggatgctgacatgaacaattcaatttca |
140 |
Q |
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| T |
45313135 |
cggtggcacacactataaacggaaggaaaaaacggtggtacacactatagatggaaggttccaatgcattatggatgctgacatgaacaattcaatttca |
45313036 |
T |
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| Q |
141 |
aagcacttcaatagaacagccacatactgaaaaacaggtcatatttagtacgcatgatacgtaccttgaatcccttcatatcag |
224 |
Q |
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| T |
45313035 |
aagcacttcaatagaacagccacatactgaaaaacaggtcatatttagtacgcatgatacgtaccttgaatcccttcatatcag |
45312952 |
T |
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