View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8548A_low_314 (Length: 223)
Name: NF8548A_low_314
Description: NF8548A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8548A_low_314 |
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Alignment Details
Target: chr1 (Bit Score: 179; Significance: 9e-97; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 179; E-Value: 9e-97
Query Start/End: Original strand, 23 - 201
Target Start/End: Original strand, 26597681 - 26597859
Alignment:
| Q |
23 |
aacaatatgatctaagacagctagtaaatggaacaaggtcaacccatttcccatctataccgacagcggctacggatgagtttttctccggtcaccggaa |
122 |
Q |
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| T |
26597681 |
aacaatatgatctaagacagctagtaaatggaacaaggtcaacccatttcccatctataccgacagcggctacggatgagtttttctccggtcaccggaa |
26597780 |
T |
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| Q |
123 |
tctgacagctttgttaactactactcatccacagacacatcaaaaccagtatgagatgatgatgttagggcgtggagta |
201 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26597781 |
tctgacagctttgttaactactactcatccacagacacatcaaaaccagtatgagatgatgatgttagggcgtggagta |
26597859 |
T |
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