View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8548A_low_57 (Length: 363)
Name: NF8548A_low_57
Description: NF8548A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8548A_low_57 |
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Alignment Details
Target: chr7 (Bit Score: 313; Significance: 1e-176; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 313; E-Value: 1e-176
Query Start/End: Original strand, 21 - 357
Target Start/End: Complemental strand, 7753083 - 7752747
Alignment:
| Q |
21 |
tcagggattgagccggttagctggttttgaaatagggaaagttcgttgagtttaggaagttgagctaaagaagctggaattgggccagataagttgttaa |
120 |
Q |
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| T |
7753083 |
tcagggattgagccggttaactggttttgaaatagggaaagttcgttgagtttaggaagttgagctaaagaagctggaattgggccagataagttgttaa |
7752984 |
T |
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| Q |
121 |
tgtatatgttgagttgttctaggctcttgatcatgcctaaggaggctgggattgggccggagagttggtttgagccaaggttagcgcttctaagcttagt |
220 |
Q |
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| T |
7752983 |
tgtatatgtagagttgttctaggctcttgatcatgcctaaggaggctgggattgggccggagagttggtttgagccaaggttagcgcttctaagcttggt |
7752884 |
T |
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| Q |
221 |
gagtcgacctagtgatgcagggatttggccggtaaacctgttcccggagaggtcgatgacatcgaggttcttgagttgacctaagaaatcagggattggg |
320 |
Q |
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| T |
7752883 |
gagtcgacctagtgatgcagggatttggccggtaaacctgttcccagagaggtcgatgacatcgaggttcttgagttgacctaagaaatcagggattggg |
7752784 |
T |
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| Q |
321 |
ccggtgagactgtccaagctaaagtcgaggtggacaa |
357 |
Q |
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| T |
7752783 |
cctgtgagactgtccaagctaaagtcgaggtgaacaa |
7752747 |
T |
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