View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8549_low_14 (Length: 315)

Name: NF8549_low_14
Description: NF8549
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8549_low_14
NF8549_low_14
[»] chr6 (10 HSPs)
chr6 (15-300)||(4610870-4611156)
chr6 (217-299)||(28322931-28323014)
chr6 (218-300)||(33621494-33621577)
chr6 (218-300)||(33704216-33704299)
chr6 (215-300)||(4464124-4464210)
chr6 (217-299)||(21000691-21000774)
chr6 (68-145)||(4515685-4515762)
chr6 (217-300)||(11572007-11572091)
chr6 (216-258)||(35218716-35218758)
chr6 (218-258)||(14939148-14939188)
[»] chr4 (24 HSPs)
chr4 (218-300)||(54768477-54768560)
chr4 (216-300)||(34739278-34739363)
chr4 (217-300)||(19849548-19849632)
chr4 (218-300)||(18257329-18257412)
chr4 (217-300)||(26424903-26424986)
chr4 (217-300)||(32441129-32441213)
chr4 (218-300)||(1173951-1174034)
chr4 (218-300)||(43139951-43140034)
chr4 (220-299)||(19225261-19225341)
chr4 (218-300)||(11277982-11278065)
chr4 (218-300)||(53457824-53457907)
chr4 (218-300)||(28798433-28798516)
chr4 (217-286)||(55400227-55400297)
chr4 (218-297)||(2864796-2864876)
chr4 (218-300)||(238503-238586)
chr4 (218-300)||(12735431-12735514)
chr4 (218-300)||(23710378-23710461)
chr4 (218-300)||(45874055-45874138)
chr4 (218-285)||(12767087-12767155)
chr4 (221-300)||(22607988-22608068)
chr4 (217-300)||(55214651-55214735)
chr4 (218-300)||(12867841-12867924)
chr4 (218-287)||(37134048-37134118)
chr4 (223-287)||(37166142-37166208)
[»] chr3 (22 HSPs)
chr3 (218-300)||(54158266-54158349)
chr3 (218-300)||(7824499-7824582)
chr3 (218-300)||(29689527-29689610)
chr3 (218-300)||(54151726-54151809)
chr3 (217-300)||(4601424-4601508)
chr3 (217-299)||(42392851-42392934)
chr3 (217-288)||(52500837-52500909)
chr3 (230-300)||(36229039-36229110)
chr3 (218-300)||(51665970-51666053)
chr3 (218-298)||(41377584-41377665)
chr3 (222-287)||(51112522-51112588)
chr3 (217-300)||(35461524-35461608)
chr3 (217-300)||(43247695-43247779)
chr3 (218-300)||(28844504-28844587)
chr3 (218-300)||(55018079-55018162)
chr3 (218-300)||(40756772-40756856)
chr3 (234-300)||(9349721-9349788)
chr3 (218-287)||(1778851-1778921)
chr3 (224-287)||(24751758-24751823)
chr3 (219-298)||(2590848-2590928)
chr3 (218-258)||(33334608-33334648)
chr3 (222-284)||(41921509-41921573)
[»] chr1 (18 HSPs)
chr1 (217-287)||(29994441-29994512)
chr1 (217-300)||(32007073-32007157)
chr1 (216-300)||(5055833-5055918)
chr1 (218-300)||(41808202-41808285)
chr1 (217-300)||(28455873-28455957)
chr1 (218-300)||(41761456-41761539)
chr1 (218-300)||(48660022-48660105)
chr1 (220-300)||(21938944-21939025)
chr1 (216-299)||(29587250-29587334)
chr1 (219-300)||(5943682-5943764)
chr1 (217-300)||(192414-192498)
chr1 (225-300)||(39276357-39276433)
chr1 (218-300)||(45813056-45813139)
chr1 (217-300)||(20747-20831)
chr1 (218-285)||(45294658-45294726)
chr1 (218-300)||(46447422-46447505)
chr1 (258-300)||(35224381-35224423)
chr1 (219-256)||(35945798-35945835)
[»] chr8 (24 HSPs)
chr8 (217-300)||(12534763-12534847)
chr8 (218-300)||(6602563-6602646)
chr8 (218-300)||(6678016-6678099)
chr8 (218-300)||(70568-70651)
chr8 (218-300)||(1078693-1078776)
chr8 (218-300)||(4531027-4531110)
chr8 (218-300)||(32333114-32333197)
chr8 (218-300)||(42192684-42192767)
chr8 (217-300)||(35779542-35779626)
chr8 (218-300)||(28817256-28817339)
chr8 (217-287)||(40911220-40911291)
chr8 (217-286)||(31969779-31969849)
chr8 (218-300)||(45264685-45264767)
chr8 (218-300)||(10963285-10963368)
chr8 (218-258)||(7792661-7792701)
chr8 (222-273)||(39303313-39303365)
chr8 (218-300)||(1385-1468)
chr8 (222-287)||(7772108-7772175)
chr8 (218-300)||(39435282-39435365)
chr8 (218-287)||(6099572-6099642)
chr8 (218-279)||(29425357-29425419)
chr8 (219-287)||(44814863-44814933)
chr8 (236-300)||(42885192-42885257)
chr8 (218-258)||(22979604-22979644)
[»] scaffold1348 (1 HSPs)
scaffold1348 (218-300)||(907-990)
[»] scaffold0038 (1 HSPs)
scaffold0038 (217-299)||(114251-114334)
[»] chr2 (22 HSPs)
chr2 (218-300)||(10639651-10639734)
chr2 (217-299)||(19048753-19048836)
chr2 (218-300)||(33083599-33083682)
chr2 (218-300)||(11459715-11459798)
chr2 (218-300)||(11708678-11708761)
chr2 (218-300)||(26605624-26605707)
chr2 (217-287)||(39831501-39831572)
chr2 (218-300)||(19537307-19537390)
chr2 (218-300)||(34460369-34460452)
chr2 (217-300)||(23839858-23839942)
chr2 (218-300)||(39535579-39535662)
chr2 (216-296)||(40786258-40786339)
chr2 (218-278)||(42578180-42578241)
chr2 (218-258)||(34234530-34234570)
chr2 (222-300)||(11816596-11816675)
chr2 (230-300)||(37197655-37197726)
chr2 (222-287)||(42160315-42160382)
chr2 (218-256)||(8742688-8742726)
chr2 (218-287)||(19816220-19816290)
chr2 (218-256)||(45125255-45125293)
chr2 (221-300)||(16654366-16654446)
chr2 (222-288)||(42200919-42200987)
[»] chr7 (23 HSPs)
chr7 (218-300)||(2146636-2146719)
chr7 (218-300)||(4106738-4106821)
chr7 (218-300)||(25546320-25546403)
chr7 (218-300)||(31770577-31770660)
chr7 (219-288)||(47250308-47250378)
chr7 (218-300)||(23358185-23358268)
chr7 (218-300)||(25112292-25112375)
chr7 (225-299)||(29484801-29484876)
chr7 (218-300)||(44083940-44084023)
chr7 (216-300)||(40058236-40058321)
chr7 (216-292)||(29255715-29255792)
chr7 (233-300)||(4107324-4107392)
chr7 (218-258)||(34763454-34763494)
chr7 (229-299)||(5587291-5587362)
chr7 (229-299)||(5592252-5592323)
chr7 (222-300)||(43753799-43753878)
chr7 (218-300)||(47557781-47557864)
chr7 (218-299)||(7162834-7162916)
chr7 (219-300)||(48146754-48146836)
chr7 (218-256)||(48444242-48444280)
chr7 (244-300)||(47570763-47570820)
chr7 (221-300)||(8439081-8439161)
chr7 (218-285)||(10220532-10220600)
[»] chr5 (13 HSPs)
chr5 (218-300)||(9577006-9577089)
chr5 (218-300)||(13203957-13204040)
chr5 (218-299)||(1191586-1191668)
chr5 (216-297)||(12257354-12257436)
chr5 (218-300)||(21018223-21018306)
chr5 (218-300)||(27721431-27721514)
chr5 (218-300)||(35317742-35317825)
chr5 (218-287)||(3386958-3387028)
chr5 (219-300)||(4824984-4825066)
chr5 (218-300)||(2970984-2971067)
chr5 (219-258)||(17984830-17984869)
chr5 (250-300)||(31909430-31909481)
chr5 (218-283)||(30127894-30127960)
[»] scaffold0352 (1 HSPs)
scaffold0352 (217-300)||(8988-9072)
[»] scaffold0119 (2 HSPs)
scaffold0119 (218-300)||(13996-14079)
scaffold0119 (218-300)||(19676-19759)
[»] scaffold0032 (1 HSPs)
scaffold0032 (216-300)||(56479-56564)
[»] scaffold0044 (1 HSPs)
scaffold0044 (218-297)||(10021-10101)
[»] scaffold0360 (1 HSPs)
scaffold0360 (216-300)||(14493-14578)
[»] scaffold0067 (1 HSPs)
scaffold0067 (217-296)||(34817-34897)
[»] scaffold0013 (1 HSPs)
scaffold0013 (222-287)||(90572-90639)
[»] scaffold0457 (1 HSPs)
scaffold0457 (219-286)||(6779-6848)


Alignment Details
Target: chr6 (Bit Score: 195; Significance: 1e-106; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 15 - 300
Target Start/End: Complemental strand, 4611156 - 4610870
Alignment:
Q  15 aaatttaactctatgaaattttttatgcttgacatataattattcaattgcatatacttaaaccatttaagatttgccagaatcacaacttaaatttagg 114  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4611156 aaatttaactctatgaaattttttatgcttgacatataattaatcaattgcatatacttaaaccatttaagatttgccagaatcacaacttaaatttagg 4611057  T
Q  115 aactcttgctgatgatgagttccatcattatgaaccgattaattgaa-tacnnnnnnnnaagtaaaaattgtttatagcatttcattaaatattagagta 213  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| |          |||| |||| |||||||||||||||||||||||| ||||||    
T  4611056 aactcttgctgatgatgagttccatcattatgaactgattaattgaattttttttttttaagtcaaaaatgtttatagcatttcattaaatataagagta 4610957  T
Q  214 acaagtctagaagtcctagctcaactggaaaaggccgaaattgcaggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    |||||||||||||| |||||| |||| ||||| || ||||||||||||||||| |||||| |||||||||||||| |||||||||||    
T  4610956 acaagtctagaagttctagcttaactagaaaatgctgaaattgcaggccagacatcatgacccgggttcgaacctgggacctcacag 4610870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 217 - 299
Target Start/End: Original strand, 28322931 - 28323014
Alignment:
Q  217 agtctagaagtcctagctcaactggaaaaggccgaaattg-caggccagacgtcatgatccgggttcgaacctaggacctcaca 299  Q
    ||||||||||||||||||||||||| ||| ||||||||||  ||||| ||||||||||||||||||||||||  ||||||||||    
T  28322931 agtctagaagtcctagctcaactggcaaatgccgaaattgtaaggccggacgtcatgatccgggttcgaacccgggacctcaca 28323014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 218 - 300
Target Start/End: Original strand, 33621494 - 33621577
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    |||||||||||||||||||||||| ||| ||||||||||| ||||| |||||||||| |||||||||||||  |||||||||||    
T  33621494 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacag 33621577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 218 - 300
Target Start/End: Original strand, 33704216 - 33704299
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    |||||||||||||||||||||||| ||| ||||||||||| ||||| |||||||||| |||||||||||||  |||||||||||    
T  33704216 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacag 33704299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 215 - 300
Target Start/End: Original strand, 4464124 - 4464210
Alignment:
Q  215 caagtctagaagtcctagctcaactggaaaaggccgaaattgca-ggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    ||||||||||||| |||| |||||||  ||| |||||||||||| |||| ||||||||||||||||||||||||| |||||||||||    
T  4464124 caagtctagaagttctagttcaactgacaaatgccgaaattgcaaggccggacgtcatgatccgggttcgaacctgggacctcacag 4464210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 217 - 299
Target Start/End: Original strand, 21000691 - 21000774
Alignment:
Q  217 agtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctcaca 299  Q
    ||||||||||||||||||||||||| ||| ||||||||||| |||||  ||||||||| | |||||||||||  ||||||||||    
T  21000691 agtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccgtacgtcatgacctgggttcgaacccgggacctcaca 21000774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 68 - 145
Target Start/End: Original strand, 4515685 - 4515762
Alignment:
Q  68 atacttaaaccatttaagatttgccagaatcacaacttaaatttaggaactcttgctgatgatgagttccatcattat 145  Q
    ||||| ||| ||||||||||| |||||||||||||||| | |||||||||||  |||||||||  |||||||||||||    
T  4515685 atactcaaaacatttaagattagccagaatcacaacttcagtttaggaactccagctgatgataggttccatcattat 4515762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 217 - 300
Target Start/End: Original strand, 11572007 - 11572091
Alignment:
Q  217 agtctagaagtcctagctcaactggaaaaggccgaaattgca-ggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    |||||||||||||||||||||||   ||| || ||||||| | ||||||||||| ||| |||||||||||||  |||||||||||    
T  11572007 agtctagaagtcctagctcaactaacaaatgcagaaattgtaaggccagacgtcgtgacccgggttcgaacccgggacctcacag 11572091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 258
Target Start/End: Complemental strand, 35218758 - 35218716
Alignment:
Q  216 aagtctagaagtcctagctcaactggaaaaggccgaaattgca 258  Q
    |||||||||||||||||||||||||| ||| ||| ||||||||    
T  35218758 aagtctagaagtcctagctcaactggcaaatgccaaaattgca 35218716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 258
Target Start/End: Original strand, 14939148 - 14939188
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattgca 258  Q
    |||||||||||||| ||||||||| ||| ||||||||||||    
T  14939148 gtctagaagtcctaactcaactggcaaatgccgaaattgca 14939188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 56; Significance: 3e-23; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 218 - 300
Target Start/End: Complemental strand, 54768560 - 54768477
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    |||||||||||||||||||||||| ||| ||||||||||| ||||| |||||||||| ||||||||||||| ||||||||||||    
T  54768560 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccaggacctcacag 54768477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 216 - 300
Target Start/End: Original strand, 34739278 - 34739363
Alignment:
Q  216 aagtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    |||||||||||||||||||||||||| ||| ||||||||||| ||||| |||||||||| |||||||||||||  |||||||||||    
T  34739278 aagtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacag 34739363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 217 - 300
Target Start/End: Complemental strand, 19849632 - 19849548
Alignment:
Q  217 agtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    ||||||||||||||||||||||||| ||| ||||||||||| ||||| |||||| |||||||||||||||||  |||||||||||    
T  19849632 agtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcgtgatccgggttcgaacccgggacctcacag 19849548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 218 - 300
Target Start/End: Original strand, 18257329 - 18257412
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    |||||||||||||||||||||||| ||| ||||||||||| ||||| ||||||||||||||||||||| ||  |||||||||||    
T  18257329 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgatccgggttcgagcccgggacctcacag 18257412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 217 - 300
Target Start/End: Complemental strand, 26424986 - 26424903
Alignment:
Q  217 agtctagaagtcctagctcaactggaaaaggccgaaattgcaggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    ||||||||||||||||||||||||| ||| |||||||||||| | | |||||||||| |||||||||||||  |||||||||||    
T  26424986 agtctagaagtcctagctcaactggcaaatgccgaaattgcaaggcggacgtcatgacccgggttcgaacccgggacctcacag 26424903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 217 - 300
Target Start/End: Complemental strand, 32441213 - 32441129
Alignment:
Q  217 agtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    ||||||||||||||||||||||||| ||| | ||||||||| ||||||||| |||||| |||||||||||||  |||||||||||    
T  32441213 agtctagaagtcctagctcaactggcaaatgtcgaaattgcaaggccagacatcatgacccgggttcgaacccgggacctcacag 32441129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 218 - 300
Target Start/End: Original strand, 1173951 - 1174034
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    |||||||||||||||||||||||| ||| ||||||||||| ||||| |||||||||| | |||||||||||  |||||||||||    
T  1173951 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacctgggttcgaacccgggacctcacag 1174034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 218 - 300
Target Start/End: Complemental strand, 43140034 - 43139951
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    |||||||||| ||||||||||||| ||| ||||||||||| ||||| |||||||||| |||||||||||||  |||||||||||    
T  43140034 gtctagaagttctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacag 43139951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 220 - 299
Target Start/End: Original strand, 19225261 - 19225341
Alignment:
Q  220 ctagaagtcctagctcaactggaaaaggccgaaattg-caggccagacgtcatgatccgggttcgaacctaggacctcaca 299  Q
    |||||||||||||||||||||| ||| ||||||||||  | ||| ||||||||||||||||||||||||  ||||||||||    
T  19225261 ctagaagtcctagctcaactggcaaatgccgaaattgtaaagccggacgtcatgatccgggttcgaacccgggacctcaca 19225341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 218 - 300
Target Start/End: Original strand, 11277982 - 11278065
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    |||||||||||||||||||||||| ||| ||||||||||| ||||| ||| |||||| |||||||| ||||  |||||||||||    
T  11277982 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacatcatgacccgggttcaaacccgggacctcacag 11278065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 218 - 300
Target Start/End: Original strand, 53457824 - 53457907
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    |||||||||||||||||||||||| ||| ||||||||||| ||| | |||||||||| ||||||||||| |  |||||||||||    
T  53457824 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggtcggacgtcatgacccgggttcgaatccgggacctcacag 53457907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 300
Target Start/End: Complemental strand, 28798516 - 28798433
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    ||||||||||||||| |||||||| ||| ||||||||||| ||||| |||||| ||| |||||||||||||  |||||| ||||    
T  28798516 gtctagaagtcctagttcaactggcaaatgccgaaattgcaaggccggacgtcgtgacccgggttcgaacccgggaccttacag 28798433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 217 - 286
Target Start/End: Original strand, 55400227 - 55400297
Alignment:
Q  217 agtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaac 286  Q
    ||||||||| ||||| ||||||||| ||| ||||||||||| ||||| ||||||||||||||| |||||||    
T  55400227 agtctagaaatcctaactcaactggtaaatgccgaaattgcaaggccggacgtcatgatccggattcgaac 55400297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 218 - 297
Target Start/End: Complemental strand, 2864876 - 2864796
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctca 297  Q
    |||||||||||||| ||||||||| ||| ||| ||||||| ||||  |||||| ||| |||||||||||||||| ||||||    
T  2864876 gtctagaagtcctaactcaactggcaaatgcctaaattgcaaggcgggacgtcgtgacccgggttcgaacctagaacctca 2864796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 300
Target Start/End: Complemental strand, 238586 - 238503
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    |||||||||||||||||||||||  ||| ||||||||||| ||||  |||| ||||| | |||||||||||  |||||||||||    
T  238586 gtctagaagtcctagctcaactgtcaaatgccgaaattgcaaggctggacgccatgacctgggttcgaacccgggacctcacag 238503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 300
Target Start/End: Original strand, 12735431 - 12735514
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattgca-ggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    |||||||||| ||||||||||||  ||| ||| |||||| | ||||||||||  ||| ||||||||||||| ||||||||||||    
T  12735431 gtctagaagtactagctcaactgacaaatgccaaaattgtaaggccagacgttgtgacccgggttcgaacccaggacctcacag 12735514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 300
Target Start/End: Complemental strand, 23710461 - 23710378
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    ||||||||||| |||||||||||| ||| | ||||||||| ||||| |||||| ||| |||| ||||||||| | |||||||||    
T  23710461 gtctagaagtcatagctcaactggtaaatgtcgaaattgcaaggccggacgtcgtgacccggattcgaacctggaacctcacag 23710378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 300
Target Start/End: Original strand, 45874055 - 45874138
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    |||||||||||||||||||||||  ||| ||| ||||||| ||||| |||||  ||| |||||||||||||  |||||||||||    
T  45874055 gtctagaagtcctagctcaactgacaaatgccaaaattgcaaggccggacgttgtgacccgggttcgaacccgggacctcacag 45874138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 285
Target Start/End: Original strand, 12767087 - 12767155
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattg-caggccagacgtcatgatccgggttcgaa 285  Q
    |||||||||||||||||||||||| ||| ||||||||||  ||  | |||||||||||| |||||||||    
T  12767087 gtctagaagtcctagctcaactggtaaatgccgaaattgtaagatcggacgtcatgatctgggttcgaa 12767155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 300
Target Start/End: Original strand, 22607988 - 22608068
Alignment:
Q  221 tagaagtcctagctcaactggaaaaggccgaaattgca-ggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    ||||||||||||||||||||  | | | |||||||||| |||| |||||| ||| |||||||||||||  |||||||||||    
T  22607988 tagaagtcctagctcaactgacagatgtcgaaattgcaaggccggacgtcgtgacccgggttcgaacccgggacctcacag 22608068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 300
Target Start/End: Original strand, 55214651 - 55214735
Alignment:
Q  217 agtctagaagtcctagctcaactggaaaaggccgaaattgca-ggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    |||||||||||| || ||||||||  ||| ||| |||||||| |||| |||||| ||| |||||||||||||  |||||||||||    
T  55214651 agtctagaagtcttaactcaactgtcaaatgccaaaattgcaaggccggacgtcgtgacccgggttcgaacccgggacctcacag 55214735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 218 - 300
Target Start/End: Original strand, 12867841 - 12867924
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    |||||||||| ||||||||||||  ||| ||||||||||| ||| | |||||| ||| ||| |||||||||| ||| |||||||    
T  12867841 gtctagaagttctagctcaactgtcaaatgccgaaattgcaaggtcggacgtcgtgacccgagttcgaacctgggatctcacag 12867924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 287
Target Start/End: Original strand, 37134048 - 37134118
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacc 287  Q
    ||||||||||||||| |||||||| ||| || |||||| | ||| | || |||||||||||||||||||||    
T  37134048 gtctagaagtcctagttcaactggcaaatgctgaaattacaaggtcggatgtcatgatccgggttcgaacc 37134118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 287
Target Start/End: Original strand, 37166142 - 37166208
Alignment:
Q  223 gaagtcctagctcaactgg-aaaaggccgaaattg-caggccagacgtcatgatccgggttcgaacc 287  Q
    ||||||||||||||||||| |||| ||||||||||  ||||| || ||||||||| |||||||||||    
T  37166142 gaagtcctagctcaactggcaaaatgccgaaattgttaggccggatgtcatgatcggggttcgaacc 37166208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 3e-23; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 218 - 300
Target Start/End: Original strand, 54158266 - 54158349
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    |||||||||||||||||||||||| ||| ||||||||||| ||||| ||||||||||||||||||||||||  |||||||||||    
T  54158266 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgatccgggttcgaacccgggacctcacag 54158349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 218 - 300
Target Start/End: Complemental strand, 7824582 - 7824499
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    |||||||||||||||||||||||| ||| ||||||||||| ||||| |||||||||| |||||||||||||  |||||||||||    
T  7824582 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacag 7824499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 218 - 300
Target Start/End: Complemental strand, 29689610 - 29689527
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    |||||||||||||||||||||||| ||| ||||||||||| ||||| |||||||||| |||||||||||||  |||||||||||    
T  29689610 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacag 29689527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 218 - 300
Target Start/End: Complemental strand, 54151809 - 54151726
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    |||||||||||||||||||||||| ||| ||||||||||| ||||| |||||||||| |||||||||||||  |||||||||||    
T  54151809 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacag 54151726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 217 - 300
Target Start/End: Original strand, 4601424 - 4601508
Alignment:
Q  217 agtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    ||||||||||||||||||||||||| ||| ||||||||||| ||||| |||||||||| |||||||||||||  | |||||||||    
T  4601424 agtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccggaacctcacag 4601508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 217 - 299
Target Start/End: Complemental strand, 42392934 - 42392851
Alignment:
Q  217 agtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctcaca 299  Q
    ||||||||||||||||||||||||| ||| ||||||||||| ||| | |||||||||||||||| |||||||  ||||||||||    
T  42392934 agtctagaagtcctagctcaactggcaaatgccgaaattgcaaggtcggacgtcatgatccgggctcgaacccgggacctcaca 42392851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 217 - 288
Target Start/End: Original strand, 52500837 - 52500909
Alignment:
Q  217 agtctagaagtcctagctcaactggaaaaggccgaaattg-caggccagacgtcatgatccgggttcgaacct 288  Q
    ||||||||||||||||||||||||| ||| | ||||||||  ||||| |||||||||||||||||||||||||    
T  52500837 agtctagaagtcctagctcaactggcaaatgtcgaaattgtaaggccggacgtcatgatccgggttcgaacct 52500909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 230 - 300
Target Start/End: Complemental strand, 36229110 - 36229039
Alignment:
Q  230 tagctcaactggaaaaggccgaaattgca-ggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    |||||||||||| ||| |||||||||||| |||| ||||||||||||||||||||||||  |||||||||||    
T  36229110 tagctcaactggcaaatgccgaaattgcaaggccggacgtcatgatccgggttcgaacccgggacctcacag 36229039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 218 - 300
Target Start/End: Complemental strand, 51666053 - 51665970
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    |||||||||||||||||||||||| ||| ||||||||||| ||||| |||||||||| | |||||||||||  |||||| ||||    
T  51666053 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacctgggttcgaacccgggaccttacag 51665970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 218 - 298
Target Start/End: Original strand, 41377584 - 41377665
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattg-caggccagacgtcatgatccgggttcgaacctaggacctcac 298  Q
    |||||||||||||||||||||||| ||| ||| ||||||  ||||| ||||||||||||| ||||||||||  |||||||||    
T  41377584 gtctagaagtcctagctcaactggcaaatgccaaaattgtaaggccggacgtcatgatccaggttcgaacccgggacctcac 41377665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 222 - 287
Target Start/End: Complemental strand, 51112588 - 51112522
Alignment:
Q  222 agaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacc 287  Q
    |||||||||||||||||||| ||| ||||||||||| ||||| |||||||||| | |||||||||||    
T  51112588 agaagtcctagctcaactggcaaatgccgaaattgctaggccggacgtcatgaccggggttcgaacc 51112522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 217 - 300
Target Start/End: Complemental strand, 35461608 - 35461524
Alignment:
Q  217 agtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    ||||||||||| ||||||||||||| ||| ||||||||||| ||| | |||||  |||||||||||||||||  | |||||||||    
T  35461608 agtctagaagttctagctcaactggcaaatgccgaaattgcaaggtcggacgttgtgatccgggttcgaacccggaacctcacag 35461524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 217 - 300
Target Start/End: Complemental strand, 43247779 - 43247695
Alignment:
Q  217 agtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    ||||||||||||||||||||||||| ||| ||| ||||||| ||||| |||||  ||| | |||||||||||  |||||||||||    
T  43247779 agtctagaagtcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaacccgggacctcacag 43247695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 300
Target Start/End: Original strand, 28844504 - 28844587
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    |||||||||| ||||||||||||  ||| ||||||||||| ||||| |||||  ||| |||||||||||||| | |||||||||    
T  28844504 gtctagaagttctagctcaactgacaaatgccgaaattgcaaggccggacgttgtgacccgggttcgaacctggaacctcacag 28844587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 300
Target Start/End: Complemental strand, 55018162 - 55018079
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattgca-ggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    |||||||||||||| ||||||||| ||| | | |||||||| |||| |||||| ||| |||||||||||||  |||||||||||    
T  55018162 gtctagaagtcctaactcaactggcaaatgtcaaaattgcaaggccggacgtcgtgacccgggttcgaacccgggacctcacag 55018079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 300
Target Start/End: Complemental strand, 40756856 - 40756772
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacg-tcatgatccgggttcgaacctaggacctcacag 300  Q
    |||||||||||||| |||||||| |||| ||| ||||||| ||| |||||| ||||||||||| ||||||||   ||||||||||    
T  40756856 gtctagaagtcctaactcaactgaaaaatgccaaaattgcaaggtcagacgatcatgatccggattcgaacccgagacctcacag 40756772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 234 - 300
Target Start/End: Complemental strand, 9349788 - 9349721
Alignment:
Q  234 tcaactggaaaaggccgaaattgca-ggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    |||||||| ||| |||||||||||| || | |||||| |||||||||||||||||  |||||||||||    
T  9349788 tcaactggcaaatgccgaaattgcaaggtcggacgtcgtgatccgggttcgaacccgggacctcacag 9349721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 287
Target Start/End: Original strand, 1778851 - 1778921
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacc 287  Q
    |||||||||||||||||||||||  ||| ||||||||||| ||||| ||| |  ||| |||||||||||||    
T  1778851 gtctagaagtcctagctcaactgacaaatgccgaaattgcaaggccggacattgtgacccgggttcgaacc 1778921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 287
Target Start/End: Original strand, 24751758 - 24751823
Alignment:
Q  224 aagtcctagctcaactgg-aaaaggccgaaattg-caggccagacgtcatgatccgggttcgaacc 287  Q
    |||||||||||||||||| |||| ||||||||||  ||||| || ||||||||| |||||||||||    
T  24751758 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatgtcatgatcggggttcgaacc 24751823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 298
Target Start/End: Complemental strand, 2590928 - 2590848
Alignment:
Q  219 tctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctcac 298  Q
    |||| |||||||| ||||||||||||| | ||||||||| |||||  || || ||||| |||||||||||  |||||||||    
T  2590928 tctataagtcctaactcaactggaaaatgtcgaaattgcaaggccgaacatcgtgatctgggttcgaaccctggacctcac 2590848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 258
Target Start/End: Original strand, 33334608 - 33334648
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattgca 258  Q
    |||||||||||||||||||||| | ||| ||||||||||||    
T  33334608 gtctagaagtcctagctcaacttgcaaatgccgaaattgca 33334648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 284
Target Start/End: Original strand, 41921509 - 41921573
Alignment:
Q  222 agaagtcctagctcaactgg-aaaaggccgaaattg-caggccagacgtcatgatccgggttcga 284  Q
    |||||||||||||||||||| |||| ||||||||||  |||||||| ||||||||  ||||||||    
T  41921509 agaagtcctagctcaactggtaaaatgccgaaattgttaggccagatgtcatgattggggttcga 41921573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 3e-23; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 217 - 287
Target Start/End: Complemental strand, 29994512 - 29994441
Alignment:
Q  217 agtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacc 287  Q
    ||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||    
T  29994512 agtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccagacgtcatgatccgggttcgaacc 29994441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 217 - 300
Target Start/End: Original strand, 32007073 - 32007157
Alignment:
Q  217 agtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    ||||||||||||||||||||||||| ||| ||||||||||| ||||| |||||||||| |||||||||||||  |||||||||||    
T  32007073 agtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacag 32007157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 216 - 300
Target Start/End: Complemental strand, 5055918 - 5055833
Alignment:
Q  216 aagtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    ||||||||||||||||||||| |||| ||| ||||||||||| ||||| |||||||||| |||||||||||||  |||||||||||    
T  5055918 aagtctagaagtcctagctcagctggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacag 5055833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 218 - 300
Target Start/End: Original strand, 41808202 - 41808285
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    |||||||||||||||||||||||| ||| ||||||||||| ||||| |||||||||| |||||||||||||  | |||||||||    
T  41808202 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccggaacctcacag 41808285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 217 - 300
Target Start/End: Original strand, 28455873 - 28455957
Alignment:
Q  217 agtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    ||||||||||||||||||||||||| ||| ||||||||||| ||||| |||||  ||| |||||||||||||  |||||||||||    
T  28455873 agtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgttgtgacccgggttcgaacccgggacctcacag 28455957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 218 - 300
Target Start/End: Complemental strand, 41761539 - 41761456
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    ||||||||||||||| |||||||| ||| ||||||||||| ||||| |||||  ||| ||||||||||||| ||||||||||||    
T  41761539 gtctagaagtcctagttcaactggcaaatgccgaaattgcaaggccggacgttgtgacccgggttcgaacccaggacctcacag 41761456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 218 - 300
Target Start/End: Original strand, 48660022 - 48660105
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    |||||||||||||||||||||||| ||| ||||||||||| ||||| ||||| |||| |||||||||||||  ||| |||||||    
T  48660022 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgttatgacccgggttcgaacccgggatctcacag 48660105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 220 - 300
Target Start/End: Original strand, 21938944 - 21939025
Alignment:
Q  220 ctagaagtcctagctcaactggaaaaggccgaaattg-caggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    |||||||||||||||||||||| ||| ||||||||||  ||||| || |||||||||||| |||||| | ||||||||||||    
T  21938944 ctagaagtcctagctcaactggtaaatgccgaaattgtaaggccggatgtcatgatccggattcgaatccaggacctcacag 21939025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 216 - 299
Target Start/End: Original strand, 29587250 - 29587334
Alignment:
Q  216 aagtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctcaca 299  Q
    |||| ||||||||||||||||||||| ||| ||||||||||| ||||| |||||| ||| | |||||||||||  ||||||||||    
T  29587250 aagtttagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcgtgacctgggttcgaacccgggacctcaca 29587334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 219 - 300
Target Start/End: Original strand, 5943682 - 5943764
Alignment:
Q  219 tctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    ||||||| ||||||||||||||  ||| ||||||||||| ||||| |||||| ||| ||||||||||||  ||||||||||||    
T  5943682 tctagaattcctagctcaactgacaaatgccgaaattgcaaggccggacgtcgtgacccgggttcgaactcaggacctcacag 5943764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 217 - 300
Target Start/End: Original strand, 192414 - 192498
Alignment:
Q  217 agtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    ||||||||||||||||||||||||  ||| ||  ||||||| ||||| |||||  ||||||| ||||||||| ||||||||||||    
T  192414 agtctagaagtcctagctcaactgacaaatgctaaaattgcaaggccggacgttgtgatccgtgttcgaacccaggacctcacag 192498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 225 - 300
Target Start/End: Original strand, 39276357 - 39276433
Alignment:
Q  225 agtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    ||||||||||||||||| ||| ||||||||||| ||||| |||||  ||| |||||||||||||  |||||||||||    
T  39276357 agtcctagctcaactggcaaatgccgaaattgcaaggccggacgttgtgacccgggttcgaacccgggacctcacag 39276433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 300
Target Start/End: Complemental strand, 45813139 - 45813056
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    |||||||||||||||||||||||  ||| ||||||||||| ||| | ||| || ||| |||||||||||||  |||||||||||    
T  45813139 gtctagaagtcctagctcaactgacaaatgccgaaattgcaaggtcggacatcgtgacccgggttcgaacccgggacctcacag 45813056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 300
Target Start/End: Original strand, 20747 - 20831
Alignment:
Q  217 agtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    ||||||||||||||| ||||||||| ||| ||||||||||| ||||  |||| | ||| |||| ||||||||  |||||||||||    
T  20747 agtctagaagtcctaactcaactggcaaatgccgaaattgcaaggcaggacgccgtgacccggattcgaacccgggacctcacag 20831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 285
Target Start/End: Original strand, 45294658 - 45294726
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaa 285  Q
    |||||||||||||||||||||| | ||| ||||||||||| || || ||| |||||| |||||||||||    
T  45294658 gtctagaagtcctagctcaactagcaaatgccgaaattgcaagaccggacatcatgacccgggttcgaa 45294726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 218 - 300
Target Start/End: Complemental strand, 46447505 - 46447422
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    |||||||||| |||| |||||||| ||| ||||||||||| ||||  |||||| | | |||||||||||||  |||||||||||    
T  46447505 gtctagaagttctagttcaactggcaaatgccgaaattgcaaggctcgacgtcgtaacccgggttcgaacccgggacctcacag 46447422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 300
Target Start/End: Original strand, 35224381 - 35224423
Alignment:
Q  258 aggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    ||||| |||||||||| ||||||||||||| ||||||||||||    
T  35224381 aggccggacgtcatgacccgggttcgaacccaggacctcacag 35224423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 256
Target Start/End: Original strand, 35945798 - 35945835
Alignment:
Q  219 tctagaagtcctagctcaactggaaaaggccgaaattg 256  Q
    ||||||||||||||||||||||| ||| ||||||||||    
T  35945798 tctagaagtcctagctcaactggtaaatgccgaaattg 35945835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 53; Significance: 2e-21; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 217 - 300
Target Start/End: Complemental strand, 12534847 - 12534763
Alignment:
Q  217 agtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    ||||||||||||||||||||||||| ||| ||||||||||| ||||| |||||| ||||||||||||||||| |||| |||||||    
T  12534847 agtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcgtgatccgggttcgaacccaggatctcacag 12534763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 218 - 300
Target Start/End: Complemental strand, 6602646 - 6602563
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    |||||||||||||||||||||||| ||| ||||||||||| ||||| |||||||||| |||||||||||||  |||||||||||    
T  6602646 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacag 6602563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 218 - 300
Target Start/End: Complemental strand, 6678099 - 6678016
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    |||||||||||||||||||||||| ||| ||||||||||| ||||| |||||||||| |||||||||||||  |||||||||||    
T  6678099 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacag 6678016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 218 - 300
Target Start/End: Complemental strand, 70651 - 70568
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    |||||||||||||||||||||||| ||| ||||||||||| ||| | |||||||||| ||||||| |||||  |||||||||||    
T  70651 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggtcggacgtcatgacccgggtttgaacccgggacctcacag 70568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 218 - 300
Target Start/End: Complemental strand, 1078776 - 1078693
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    ||||||||||| |||||||||||| ||| ||||||||||| ||||| |||||||||| || ||||||||||  |||||||||||    
T  1078776 gtctagaagtcgtagctcaactggtaaatgccgaaattgcaaggccggacgtcatgacccaggttcgaacccgggacctcacag 1078693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 218 - 300
Target Start/End: Complemental strand, 4531110 - 4531027
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    |||||||||||||||||||| ||| ||| ||||||||||| ||||  |||||||||| |||||||||||||  |||||||||||    
T  4531110 gtctagaagtcctagctcaattggcaaatgccgaaattgcaaggctggacgtcatgacccgggttcgaacccgggacctcacag 4531027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 218 - 300
Target Start/End: Original strand, 32333114 - 32333197
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    |||||||||||||||||||||||| ||| ||||||||||| ||||| |||||  ||| |||||||||||||  |||||||||||    
T  32333114 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgttgtgacccgggttcgaacccgggacctcacag 32333197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 218 - 300
Target Start/End: Complemental strand, 42192767 - 42192684
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    |||||||||||||||||||||||| ||| ||||||||||| ||||| |||||||||| ||| |||||||||  ||| |||||||    
T  42192767 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgagttcgaacccgggatctcacag 42192684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 217 - 300
Target Start/End: Complemental strand, 35779626 - 35779542
Alignment:
Q  217 agtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    ||||||||||||||||||||||||| ||| ||| ||||||| ||||| |||||  ||| |||||||||||||  |||||||||||    
T  35779626 agtctagaagtcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacccgggttcgaacccgggacctcacag 35779542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 300
Target Start/End: Original strand, 28817256 - 28817339
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    |||||||||||||||||||||||| ||| ||||||||||| ||||| |||||  ||| |||||||||||||  ||| |||||||    
T  28817256 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgttgtgacccgggttcgaacccgggatctcacag 28817339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 217 - 287
Target Start/End: Original strand, 40911220 - 40911291
Alignment:
Q  217 agtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacc 287  Q
    ||||||||||| ||||||||||||| ||| ||||||||||| ||||| |||||| ||| |||||||||||||    
T  40911220 agtctagaagtgctagctcaactggcaaatgccgaaattgcaaggccggacgtcgtgacccgggttcgaacc 40911291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 217 - 286
Target Start/End: Complemental strand, 31969849 - 31969779
Alignment:
Q  217 agtctagaagtcctagctcaactggaaaaggccgaaattgca-ggccagacgtcatgatccgggttcgaac 286  Q
    |||||||||||| ||||| || ||| ||| ||||||||| || ||||||||||||||||||||||||||||    
T  31969849 agtctagaagtcatagcttaattggcaaatgccgaaatttcaaggccagacgtcatgatccgggttcgaac 31969779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 218 - 300
Target Start/End: Complemental strand, 45264767 - 45264685
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattgcaggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    |||||||||||||| ||||||||| ||| |||||||||||||| |  ||||| |||  ||||||||||||  |||||||||||    
T  45264767 gtctagaagtcctaactcaactggcaaatgccgaaattgcaggtcgaacgtcgtgactcgggttcgaacccgggacctcacag 45264685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 300
Target Start/End: Complemental strand, 10963368 - 10963285
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    |||||||||||||||||||||||| ||| ||||||||| | |||||  ||||  |||||| ||||||||||  |||||||||||    
T  10963368 gtctagaagtcctagctcaactggcaaatgccgaaattacaaggccgaacgttgtgatccaggttcgaacccgggacctcacag 10963285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 258
Target Start/End: Original strand, 7792661 - 7792701
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattgca 258  Q
    |||||||||||||||||||||||| ||| ||||||||||||    
T  7792661 gtctagaagtcctagctcaactggcaaatgccgaaattgca 7792701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 273
Target Start/End: Original strand, 39303313 - 39303365
Alignment:
Q  222 agaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatga 273  Q
    |||||||||||||||||||| ||| ||||||||||| ||||| ||||||||||    
T  39303313 agaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatga 39303365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 218 - 300
Target Start/End: Complemental strand, 1468 - 1385
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    |||||||||| ||||||||||||| ||| ||| ||||||| ||||| |||||  ||| || ||||||||||  |||||||||||    
T  1468 gtctagaagttctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgaccctggttcgaacccgggacctcacag 1385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 222 - 287
Target Start/End: Complemental strand, 7772175 - 7772108
Alignment:
Q  222 agaagtcctagctcaactgg-aaaaggccgaaattg-caggccagacgtcatgatccgggttcgaacc 287  Q
    |||||||||||||||||||| |||| ||||||||||  ||||| || ||||||||| |||||||||||    
T  7772175 agaagtcctagctcaactggtaaaatgccgaaattgttaggccggatgtcatgatcggggttcgaacc 7772108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 218 - 300
Target Start/End: Original strand, 39435282 - 39435365
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    |||||||||| ||||||||||||| ||| | | ||||||| ||| | |||||||||||| |||||||||||   ||||||||||    
T  39435282 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatctgggttcgaacccgagacctcacag 39435365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 287
Target Start/End: Original strand, 6099572 - 6099642
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacc 287  Q
    ||||||||||||||| |||||| | ||| | ||||||||| ||||| |||||||||| ||| |||||||||    
T  6099572 gtctagaagtcctagttcaacttgcaaatgtcgaaattgcaaggccggacgtcatgacccgagttcgaacc 6099642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 279
Target Start/End: Original strand, 29425357 - 29425419
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccggg 279  Q
    |||||||||||||||||||| ||| ||| ||| ||||||| ||||| |||||||||| |||||    
T  29425357 gtctagaagtcctagctcaattggcaaatgccaaaattgcaaggccggacgtcatgacccggg 29425419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 287
Target Start/End: Original strand, 44814863 - 44814933
Alignment:
Q  219 tctagaagtcctagctcaactgg-aaaaggccgaaattg-caggccagacgtcatgatccgggttcgaacc 287  Q
    ||||||||||||||||||||||| |||| ||||||||||  ||||| || ||||||| | |||||||||||    
T  44814863 tctagaagtcctagctcaactggcaaaatgccgaaattgttaggccggatgtcatgaccggggttcgaacc 44814933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 300
Target Start/End: Original strand, 42885192 - 42885257
Alignment:
Q  236 aactggaaaaggccgaaattgca-ggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    |||||| ||| |||||||||||| |||| |||||||||| |||||||||||||  ||| |||||||    
T  42885192 aactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggatctcacag 42885257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 258
Target Start/End: Original strand, 22979604 - 22979644
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattgca 258  Q
    |||||||||||||||||||||||| ||| | ||||||||||    
T  22979604 gtctagaagtcctagctcaactggcaaatgtcgaaattgca 22979644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1348 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold1348
Description:

Target: scaffold1348; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 218 - 300
Target Start/End: Complemental strand, 990 - 907
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    |||||||||||||||||||||||| ||| ||||||||||| ||||| |||||||||| |||||||||||||  |||||||||||    
T  990 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacag 907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 217 - 299
Target Start/End: Original strand, 114251 - 114334
Alignment:
Q  217 agtctagaagtcctagctcaactggaaaaggccgaaattg-caggccagacgtcatgatccgggttcgaacctaggacctcaca 299  Q
    ||||||||||||||||||||||||| ||| ||||||||||  ||||| ||||||||||||||||||||||||  ||||||||||    
T  114251 agtctagaagtcctagctcaactggcaaatgccgaaattgtaaggccggacgtcatgatccgggttcgaacccgggacctcaca 114334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 8e-21; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 218 - 300
Target Start/End: Complemental strand, 10639734 - 10639651
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    |||||||||||||||||||||||| ||| ||||||||||| ||||| |||||||||| |||||||||||||  |||||||||||    
T  10639734 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacag 10639651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 217 - 299
Target Start/End: Original strand, 19048753 - 19048836
Alignment:
Q  217 agtctagaagtcctagctcaactggaaaaggccgaaattg-caggccagacgtcatgatccgggttcgaacctaggacctcaca 299  Q
    ||||||||||||||||||||||||| ||| ||||||||||  ||||| ||||||||||||||||||||||||  ||||||||||    
T  19048753 agtctagaagtcctagctcaactggcaaatgccgaaattgtaaggccggacgtcatgatccgggttcgaacccgggacctcaca 19048836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 218 - 300
Target Start/End: Complemental strand, 33083682 - 33083599
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    |||||||||||||||||||||||| ||| ||||||||||| ||||| |||||||||| |||||||||||||  |||||||||||    
T  33083682 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacag 33083599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 218 - 300
Target Start/End: Original strand, 11459715 - 11459798
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    |||||||||||||||||||||||| ||| ||||||||||| ||| | |||||||||| |||||||||||||  |||||||||||    
T  11459715 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggtcggacgtcatgacccgggttcgaacccgggacctcacag 11459798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 218 - 300
Target Start/End: Original strand, 11708678 - 11708761
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattg-caggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    |||||||||||||||||||||||| ||| ||||||||||  ||||| |||||  ||| ||||||||||||| ||||||||||||    
T  11708678 gtctagaagtcctagctcaactggcaaatgccgaaattgtaaggccggacgttgtgacccgggttcgaacccaggacctcacag 11708761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 218 - 300
Target Start/End: Original strand, 26605624 - 26605707
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    |||||||||||||||||||||||| ||| ||||||||||| ||||| |||||  ||| |||||||||||||  |||||||||||    
T  26605624 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgttgtgacccgggttcgaacccgggacctcacag 26605707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 217 - 287
Target Start/End: Complemental strand, 39831572 - 39831501
Alignment:
Q  217 agtctagaagtcctagctcaactggaaaaggccgaaattgca-ggccagacgtcatgatccgggttcgaacc 287  Q
    |||||| |||||||||||||||||| |||  ||||||||||| |||| ||||||||||||||||||||||||    
T  39831572 agtctataagtcctagctcaactggcaaataccgaaattgcaaggccggacgtcatgatccgggttcgaacc 39831501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 300
Target Start/End: Original strand, 19537307 - 19537390
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    ||||||||||||||| |||||||| ||| ||||||||||| ||||| |||||  |||||||||||||||||  | |||||||||    
T  19537307 gtctagaagtcctagttcaactggcaaatgccgaaattgcaaggccggacgttgtgatccgggttcgaacccggaacctcacag 19537390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 300
Target Start/End: Original strand, 34460369 - 34460452
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    |||||||||||||||||||||||  ||| ||||||||||| ||||| |||||  ||| ||||||||||||| || |||||||||    
T  34460369 gtctagaagtcctagctcaactgacaaatgccgaaattgcaaggccggacgttgtgacccgggttcgaacccagaacctcacag 34460452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 217 - 300
Target Start/End: Original strand, 23839858 - 23839942
Alignment:
Q  217 agtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    ||||||||||||||| ||||||||| ||| ||| ||||||| ||||| |||||  ||| | |||||||||||| |||||||||||    
T  23839858 agtctagaagtcctaactcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaacctgggacctcacag 23839942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 300
Target Start/End: Complemental strand, 39535662 - 39535579
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattgca-ggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    |||||||||||||| ||||||| | ||| | |||||||||| |||| |||||| ||| |||||||||||||  |||||||||||    
T  39535662 gtctagaagtcctaactcaactagcaaatgtcgaaattgcaaggccggacgtcgtgacccgggttcgaacccgggacctcacag 39535579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 216 - 296
Target Start/End: Complemental strand, 40786339 - 40786258
Alignment:
Q  216 aagtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctc 296  Q
    ||||||||||||| || ||||||||  ||| ||||||||||| ||||| |||||| ||| || |||||||||||| ||||||    
T  40786339 aagtctagaagtcataactcaactgacaaatgccgaaattgcaaggccggacgtcgtgaccctggttcgaacctaagacctc 40786258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 278
Target Start/End: Original strand, 42578180 - 42578241
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgg 278  Q
    |||||||||||||||||||||||| ||| ||||||||||| ||| | |||||||||| ||||    
T  42578180 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggtcggacgtcatgacccgg 42578241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 258
Target Start/End: Original strand, 34234530 - 34234570
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattgca 258  Q
    |||||||||||||||||||||||| ||| ||||||||||||    
T  34234530 gtctagaagtcctagctcaactggcaaatgccgaaattgca 34234570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 222 - 300
Target Start/End: Complemental strand, 11816675 - 11816596
Alignment:
Q  222 agaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    |||||||||||||||||||| ||| ||||||||||| ||| | |||||| ||| | |||||||||||  | |||||||||    
T  11816675 agaagtcctagctcaactggcaaatgccgaaattgcaaggtcggacgtcgtgacctgggttcgaacccggaacctcacag 11816596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 300
Target Start/End: Complemental strand, 37197726 - 37197655
Alignment:
Q  230 tagctcaactggaaaaggccgaaattgca-ggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    |||||||||||| ||| |||||||||||| |||  |||||| ||| |||||||||||||  |||||||||||    
T  37197726 tagctcaactggcaaatgccgaaattgcaaggctggacgtcgtgacccgggttcgaacccgggacctcacag 37197655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 222 - 287
Target Start/End: Complemental strand, 42160382 - 42160315
Alignment:
Q  222 agaagtcctagctcaactgg-aaaaggccgaaattg-caggccagacgtcatgatccgggttcgaacc 287  Q
    |||||||||||||||||||| |||| ||||||||||  ||||| || ||||||||| |||||||||||    
T  42160382 agaagtcctagctcaactggcaaaatgccgaaattgttaggccggatgtcatgatcggggttcgaacc 42160315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 256
Target Start/End: Complemental strand, 8742726 - 8742688
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattg 256  Q
    |||||||||||||||||||||||  ||||||||||||||    
T  8742726 gtctagaagtcctagctcaactgacaaaggccgaaattg 8742688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 287
Target Start/End: Original strand, 19816220 - 19816290
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacc 287  Q
    |||||||||||||||||||||||| |||  |||||||||| ||||| |||||  ||| ||||||| |||||    
T  19816220 gtctagaagtcctagctcaactggcaaataccgaaattgcaaggccggacgttgtgacccgggtttgaacc 19816290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 256
Target Start/End: Complemental strand, 45125293 - 45125255
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattg 256  Q
    |||||||||||||||||||||||| ||| ||||||||||    
T  45125293 gtctagaagtcctagctcaactggcaaatgccgaaattg 45125255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 221 - 300
Target Start/End: Original strand, 16654366 - 16654446
Alignment:
Q  221 tagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    ||||||||||| ||||||||  ||| ||||||||||| ||||| |||| | ||||||| |||||||||  | |||||||||    
T  16654366 tagaagtcctaactcaactgataaatgccgaaattgcaaggccggacgccgtgatccgagttcgaacccggaacctcacag 16654446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 288
Target Start/End: Complemental strand, 42200987 - 42200919
Alignment:
Q  222 agaagtcctagctcaactgg-aaaaggccgaaattg-caggccagacgtcatgatccgggttcgaacct 288  Q
    |||||||||||||||||||| |||| ||| ||||||  ||||| || ||||||||| ||||||||||||    
T  42200987 agaagtcctagctcaactggcaaaatgccaaaattgttaggccggatgtcatgatcggggttcgaacct 42200919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 2e-18; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 218 - 300
Target Start/End: Original strand, 2146636 - 2146719
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    |||||||||||||||||||||||||||| ||||||||||| ||||| |||||  ||| ||||||||||||| | ||||||||||    
T  2146636 gtctagaagtcctagctcaactggaaaatgccgaaattgcaaggccggacgttgtgacccgggttcgaacccaagacctcacag 2146719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 218 - 300
Target Start/End: Original strand, 4106738 - 4106821
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    |||||||||||||||| ||||||| ||| ||||||||||| ||||| |||||||||| |||||||||||||  |||||||||||    
T  4106738 gtctagaagtcctagcccaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacag 4106821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 218 - 300
Target Start/End: Complemental strand, 25546403 - 25546320
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    |||||||||||||||||||||||| ||| ||||||||||| ||||| |||||||||| ||||||||||| |  |||||||||||    
T  25546403 gtctagaagtcctagctcaactggtaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaatccgggacctcacag 25546320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 218 - 300
Target Start/End: Complemental strand, 31770660 - 31770577
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    |||||||||||||||||||||||| ||| ||||||||||| ||||| || ||||||| |||||||||||||  |||||||||||    
T  31770660 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggatgtcatgacccgggttcgaacccgggacctcacag 31770577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 219 - 288
Target Start/End: Complemental strand, 47250378 - 47250308
Alignment:
Q  219 tctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacct 288  Q
    ||||||||||||||||||||||| ||| ||||||||||| ||||| |||||||||| ||||||||||||||    
T  47250378 tctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacct 47250308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 300
Target Start/End: Original strand, 23358185 - 23358268
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    |||||||||||||||||||||||| |||  |||||||||| ||||| |||||| | | |||||||||||||  |||||||||||    
T  23358185 gtctagaagtcctagctcaactggcaaataccgaaattgcaaggccggacgtcgtaacccgggttcgaacccgggacctcacag 23358268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 300
Target Start/End: Complemental strand, 25112375 - 25112292
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    |||||||||||||||||||||||| |||  |||||||||| ||| | |||||||||| | |||||||||||  |||||||||||    
T  25112375 gtctagaagtcctagctcaactggcaaataccgaaattgcaaggtcggacgtcatgacctgggttcgaacccgggacctcacag 25112292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 225 - 299
Target Start/End: Complemental strand, 29484876 - 29484801
Alignment:
Q  225 agtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctcaca 299  Q
    ||||||||||||||||| ||| ||||||||||| ||||| |||||||||||| ||||| |||||  ||||||||||    
T  29484876 agtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgatctgggtttgaacccgggacctcaca 29484801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 300
Target Start/End: Original strand, 44083940 - 44084023
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    |||||||||||||||||||||||| ||| ||| ||||||| ||||| |||||  ||| |||||||||||||  |||||||||||    
T  44083940 gtctagaagtcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacccgggttcgaacccgggacctcacag 44084023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 216 - 300
Target Start/End: Original strand, 40058236 - 40058321
Alignment:
Q  216 aagtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    |||||||||||||||| ||||||||| ||| ||| ||||||| ||||| |||||  ||| |||||||||||||  |||||||||||    
T  40058236 aagtctagaagtcctaactcaactggcaaatgccaaaattgcaaggccggacgttgtgacccgggttcgaacccgggacctcacag 40058321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 216 - 292
Target Start/End: Original strand, 29255715 - 29255792
Alignment:
Q  216 aagtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctagga 292  Q
    |||||||||||| ||||||||||||| ||| ||| ||||||| |||   |||||| ||||||||||||||||| ||||    
T  29255715 aagtctagaagttctagctcaactggcaaatgccaaaattgcaaggttggacgtcgtgatccgggttcgaacccagga 29255792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 300
Target Start/End: Original strand, 4107324 - 4107392
Alignment:
Q  233 ctcaactggaaaaggccgaaattgca-ggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    ||||||||| ||| |||||||||||| |||| ||||||| || |||||||||||||  |||||||||||    
T  4107324 ctcaactggcaaatgccgaaattgcaaggccggacgtcacgacccgggttcgaacccgggacctcacag 4107392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 258
Target Start/End: Original strand, 34763454 - 34763494
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattgca 258  Q
    |||||||||||||||||||||||||||| | ||||||||||    
T  34763454 gtctagaagtcctagctcaactggaaaatgtcgaaattgca 34763494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 229 - 299
Target Start/End: Original strand, 5587291 - 5587362
Alignment:
Q  229 ctagctcaactggaaaaggccgaaattgcagg-ccagacgtcatgatccgggttcgaacctaggacctcaca 299  Q
    ||||||||||||  ||| |||||||||||| | || ||| || ||||||||||||||||| |||||||||||    
T  5587291 ctagctcaactgacaaatgccgaaattgcaagtccggacatcgtgatccgggttcgaacccaggacctcaca 5587362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 229 - 299
Target Start/End: Original strand, 5592252 - 5592323
Alignment:
Q  229 ctagctcaactggaaaaggccgaaattgcagg-ccagacgtcatgatccgggttcgaacctaggacctcaca 299  Q
    ||||||||||||  ||| |||||||||||| | || ||| || ||||||||||||||||| |||||||||||    
T  5592252 ctagctcaactgacaaatgccgaaattgcaagtccggacatcgtgatccgggttcgaacccaggacctcaca 5592323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 222 - 300
Target Start/End: Complemental strand, 43753878 - 43753799
Alignment:
Q  222 agaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    ||||||||||| |||||||| ||| ||||||||||| ||||| |||||| ||| | |||||||||||  | |||||||||    
T  43753878 agaagtcctagttcaactggcaaatgccgaaattgcaaggccggacgtcgtgacctgggttcgaacccggaacctcacag 43753799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 218 - 300
Target Start/End: Original strand, 47557781 - 47557864
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    |||||||||||||| ||||||||| ||| ||||||||| | ||| |  ||||||||| |||||||||||||  | |||||||||    
T  47557781 gtctagaagtcctaactcaactggtaaatgccgaaattacaaggtcgcacgtcatgacccgggttcgaacccggaacctcacag 47557864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 299
Target Start/End: Complemental strand, 7162916 - 7162834
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattg-caggccagacgtcatgatccgggttcgaacctaggacctcaca 299  Q
    ||||| |||||||||||||||||| ||| ||||||||||  ||||| |||||  ||| ||||||||||||   ||||||||||    
T  7162916 gtctaaaagtcctagctcaactggcaaatgccgaaattgtaaggccggacgttgtgacccgggttcgaactcgggacctcaca 7162834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 300
Target Start/End: Original strand, 48146754 - 48146836
Alignment:
Q  219 tctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    |||||| || |||||||||||| |||| || |||||||| ||| |||| ||| ||| |||||||||||||  |||||||||||    
T  48146754 tctagaggttctagctcaactgaaaaatgcagaaattgcaaggtcagatgtcgtgacccgggttcgaacccgggacctcacag 48146836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 256
Target Start/End: Complemental strand, 48444280 - 48444242
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattg 256  Q
    ||||||||||||||||||||||| |||| ||||||||||    
T  48444280 gtctagaagtcctagctcaactgaaaaatgccgaaattg 48444242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 300
Target Start/End: Complemental strand, 47570820 - 47570763
Alignment:
Q  244 aaggccgaaattgca-ggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    ||||||||||||||| |||| |||||||||| |||||||||||||  ||| |||||||    
T  47570820 aaggccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggatctcacag 47570763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 221 - 300
Target Start/End: Original strand, 8439081 - 8439161
Alignment:
Q  221 tagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    |||||||||||| |||||||| ||| ||| ||||||| ||| | |||||  ||| |||| |||||||| ||||||||||||    
T  8439081 tagaagtcctagttcaactggcaaatgccaaaattgcaaggtcggacgttgtgacccggattcgaacccaggacctcacag 8439161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 285
Target Start/End: Complemental strand, 10220600 - 10220532
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattg-caggccagacgtcatgatccgggttcgaa 285  Q
    |||||||||||||| ||||||||| ||| ||| ||||||  ||||  |||||||||||| |||||||||    
T  10220600 gtctagaagtcctaactcaactggcaaaagccaaaattgtaaggcaggacgtcatgatctgggttcgaa 10220532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 2e-18; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 218 - 300
Target Start/End: Complemental strand, 9577089 - 9577006
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    |||||||||||||||||||||||| ||| || |||||||| |||||||||||||||| | ||||||||||| || |||||||||    
T  9577089 gtctagaagtcctagctcaactggcaaatgctgaaattgcaaggccagacgtcatgacctgggttcgaacccagaacctcacag 9577006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 218 - 300
Target Start/End: Original strand, 13203957 - 13204040
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    |||||||||||||||||||||||| ||| ||||||||||| ||||| |||||| ||| |||||||||||||  |||||||||||    
T  13203957 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcgtgacccgggttcgaacccgggacctcacag 13204040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 218 - 299
Target Start/End: Complemental strand, 1191668 - 1191586
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctcaca 299  Q
    |||||||||||||||||||||||| ||| | ||||||||| ||||| |||||| |||||||||||||||||  ||||||||||    
T  1191668 gtctagaagtcctagctcaactggcaaatgacgaaattgcaaggccggacgtcgtgatccgggttcgaacccgggacctcaca 1191586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 216 - 297
Target Start/End: Original strand, 12257354 - 12257436
Alignment:
Q  216 aagtctagaagtcctagctcaactggaaaaggccgaaattg-caggccagacgtcatgatccgggttcgaacctaggacctca 297  Q
    |||||||||||||||||||||||||| ||| ||||||||||  |||||||||||  ||| | ||||||||||| |||||||||    
T  12257354 aagtctagaagtcctagctcaactggcaaatgccgaaattgtaaggccagacgttgtgacctgggttcgaacccaggacctca 12257436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 300
Target Start/End: Original strand, 21018223 - 21018306
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    |||||||||||||||||||||||| ||| ||| ||||||| ||||| |||||  ||| |||||||||||||  |||||||||||    
T  21018223 gtctagaagtcctagctcaactggcaaatgccaaaattgcgaggccggacgttgtgacccgggttcgaacccgggacctcacag 21018306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 300
Target Start/End: Original strand, 27721431 - 27721514
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    |||||||||||||||||||||||||||| ||||||||||| | | | |||||| ||| ||||||| |||||  |||||||||||    
T  27721431 gtctagaagtcctagctcaactggaaaatgccgaaattgcaaagtcggacgtcgtgacccgggtttgaacccgggacctcacag 27721514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 300
Target Start/End: Complemental strand, 35317825 - 35317742
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    |||||||||||||||||||||||| ||| ||||||||||| ||| | ||||| |||| | ||| |||||||  |||||||||||    
T  35317825 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggtcggacgttatgacctggggtcgaacccgggacctcacag 35317742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 287
Target Start/End: Complemental strand, 3387028 - 3386958
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacc 287  Q
    ||||| ||||||||| |||||||| ||| ||||||||||| ||||| |||||| | |||||||||||||||    
T  3387028 gtctaaaagtcctagttcaactggcaaatgccgaaattgcaaggccggacgtcgttatccgggttcgaacc 3386958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 300
Target Start/End: Complemental strand, 4825066 - 4824984
Alignment:
Q  219 tctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    ||||||||||||||||||||||| ||| ||||||||||| ||||| |||||  ||| || ||||| ||||  |||||||||||    
T  4825066 tctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgttgtgacccaggttcaaacccgggacctcacag 4824984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 218 - 300
Target Start/End: Original strand, 2970984 - 2971067
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattg-caggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    |||||||||||||||||||||||  ||| | ||||||||  ||| |||||||  ||| ||||||||||||||  ||||||||||    
T  2970984 gtctagaagtcctagctcaactgataaatgtcgaaattgtaaggtcagacgttgtgacccgggttcgaacctgagacctcacag 2971067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 219 - 258
Target Start/End: Complemental strand, 17984869 - 17984830
Alignment:
Q  219 tctagaagtcctagctcaactggaaaaggccgaaattgca 258  Q
    |||||||||||||||||||||| |||||| ||||||||||    
T  17984869 tctagaagtcctagctcaactgaaaaaggtcgaaattgca 17984830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 250 - 300
Target Start/End: Complemental strand, 31909481 - 31909430
Alignment:
Q  250 gaaattgca-ggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    ||||||||| ||||||||||||||| |||||||||||||  |||||||||||    
T  31909481 gaaattgcaaggccagacgtcatgacccgggttcgaacccgggacctcacag 31909430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 283
Target Start/End: Original strand, 30127894 - 30127960
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcg 283  Q
    |||||||||||||||||||||| | ||| ||||||||||| ||||| ||| || ||| |||||||||    
T  30127894 gtctagaagtcctagctcaacttgtaaatgccgaaattgcaaggccggacatcgtgacccgggttcg 30127960  T

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Target: scaffold0352 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 217 - 300
Target Start/End: Complemental strand, 9072 - 8988
Alignment:
Q  217 agtctagaagtcctagctcaactggaaaaggccgaaattgca-ggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    ||||||||||| ||||||||||||| ||| |||||||||| | |||  ||||| ||||| |||||||||||||||||||||||||    
T  9072 agtctagaagttctagctcaactggtaaatgccgaaattgtaaggcgggacgttatgattcgggttcgaacctaggacctcacag 8988  T

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Target: scaffold0119 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 218 - 300
Target Start/End: Complemental strand, 14079 - 13996
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    |||||||||||||||||||||||| |||  |||||||||| ||||| |||||  |||||||||||||||||  |||||||||||    
T  14079 gtctagaagtcctagctcaactggcaaataccgaaattgcaaggccggacgttgtgatccgggttcgaacccgggacctcacag 13996  T

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Target: scaffold0119; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 218 - 300
Target Start/End: Complemental strand, 19759 - 19676
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    |||||||||||||||||||||||| |||  |||||||||| ||||| |||||  |||||||||||||||||  |||||||||||    
T  19759 gtctagaagtcctagctcaactggcaaataccgaaattgcaaggccggacgttgtgatccgggttcgaacccgggacctcacag 19676  T

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Target: scaffold0032 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 216 - 300
Target Start/End: Original strand, 56479 - 56564
Alignment:
Q  216 aagtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    |||||||||||||||||||||||||| ||| ||||||||||| ||| | |||||  ||| |||||||||||||  |||||||||||    
T  56479 aagtctagaagtcctagctcaactggcaaatgccgaaattgcaaggtcggacgttgtgacccgggttcgaacccgggacctcacag 56564  T

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Target: scaffold0044 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 218 - 297
Target Start/End: Complemental strand, 10101 - 10021
Alignment:
Q  218 gtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctca 297  Q
    |||||||||||||||||||||||| ||| ||||||||||| ||||| |||||| | | |||||||||||||  ||||||||    
T  10101 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcgtaacccgggttcgaacccgggacctca 10021  T

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Target: scaffold0360 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 216 - 300
Target Start/End: Original strand, 14493 - 14578
Alignment:
Q  216 aagtctagaagtcctagctcaactggaaaaggccgaaattgca-ggccagacgtcatgatccgggttcgaacctaggacctcacag 300  Q
    ||||||| |||||||||| || |||  ||| | |||||||||| |||| |||||| |||||||||||||||||  |||||||||||    
T  14493 aagtctataagtcctagcacagctgacaaatgtcgaaattgcaaggccggacgtcgtgatccgggttcgaacccgggacctcacag 14578  T

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Target: scaffold0067 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 296
Target Start/End: Original strand, 34817 - 34897
Alignment:
Q  217 agtctagaagtcctagctcaactggaaaaggccgaaattgc-aggccagacgtcatgatccgggttcgaacctaggacctc 296  Q
    |||| |||||||||||||||||||| ||| ||||||||||| ||||| |||||| |||   ||||||||| | ||||||||    
T  34817 agtccagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcgtgacatgggttcgaatccaggacctc 34897  T

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Target: scaffold0013 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 222 - 287
Target Start/End: Original strand, 90572 - 90639
Alignment:
Q  222 agaagtcctagctcaactgg-aaaaggccgaaattg-caggccagacgtcatgatccgggttcgaacc 287  Q
    |||||||||||||||||||| |||| ||||||||||  ||||| || ||||||||| |||||||||||    
T  90572 agaagtcctagctcaactggcaaaatgccgaaattgttaggcctgatgtcatgatcggggttcgaacc 90639  T

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Target: scaffold0457 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0457
Description:

Target: scaffold0457; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 286
Target Start/End: Original strand, 6779 - 6848
Alignment:
Q  219 tctagaagtcctagctcaactgg-aaaaggccgaaattg-caggccagacgtcatgatccgggttcgaac 286  Q
    ||||||||||||||||||||||| |||| ||||||||||  ||||| || ||||||| | ||||||||||    
T  6779 tctagaagtcctagctcaactggcaaaatgccgaaattgttaggccggatgtcatgaccggggttcgaac 6848  T

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