View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8551_low_15 (Length: 368)
Name: NF8551_low_15
Description: NF8551
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8551_low_15 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 279; Significance: 1e-156; HSPs: 20)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 8 - 350
Target Start/End: Complemental strand, 26179185 - 26178843
Alignment:
| Q |
8 |
ggtctatacttcatgatcaaatgagctgcacagttggagaattggcttgagctgtaataatgaattcttggaatacctagttttgcagctgcttccactg |
107 |
Q |
| |
|
|||||||||||||||||||||||||| |||| |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26179185 |
ggtctatacttcatgatcaaatgagcaacacaattggagaagtagcttgagctgtaataatgaattcttggaatacctagttttgcagctgcttccactg |
26179086 |
T |
|
| Q |
108 |
tccacggatacgacatatcagtgactatacaatcaggttgaagatcttgaaacaaaatctcaattggattttggagcatcattactgcgcgggtgatttt |
207 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| ||||||||||||||| |
|
|
| T |
26179085 |
tccacggatacgacatatcagtgacaatacaatcaggttgaagatcttgaaacaaaatctcaattggattctggagcataattattgcgcgggtgatttt |
26178986 |
T |
|
| Q |
208 |
acctagtatttcaaatgaaattccatctttcatgttttcaacaccatctggaagacaaacttgagctgaagggaactgaatcagatgagttttgatggag |
307 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| || |||| || ||||||||||||||||| || |||||||||||||||||| |
|
|
| T |
26178985 |
acctagtatttcaaatgaaattccatctttcatgttttcaacaccatcagggagacctacctgagctgaagggaactgtataagatgagttttgatggag |
26178886 |
T |
|
| Q |
308 |
tatcctgaattgaagtcactgtctatagatttttggaatgttg |
350 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26178885 |
tatcctgaattgaagtcactgtctatagatttttggaatgttg |
26178843 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 350
Target Start/End: Complemental strand, 26155312 - 26154963
Alignment:
| Q |
1 |
atcatgaggtctatacttcatgatcaaatgagctgcacagttggagaattggcttgagctgtaataatgaattcttggaatacctagttttgcagctgct |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||| |||||||| | ||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
26155312 |
atcatgaggtctatacttcatgatcaaatgagcagcacaattggagaagtagcttgagctgtaataatgaattcttggaatacctagtcttgcagctgct |
26155213 |
T |
|
| Q |
101 |
tccactgtccacggatacgacatatcagtgactatacaatcaggttgaagatcttgaaacaaaatctcaattggattttggagcatcattactgcgcggg |
200 |
Q |
| |
|
|| || ||||| ||| || |||||| || |||||||||||||||||||| |||||||||||| |||||| |||| ||||||||| || | | || |
|
|
| T |
26155212 |
tcgaccgtccaaggaaacatcatatctgtcactatacaatcaggttgaaggtcttgaaacaaagcctcaatcggatcttggagcatggatattccaaggc |
26155113 |
T |
|
| Q |
201 |
tgattttacctagtatttcaaatgaaattccatctttcatgttttcaacaccatctggaagacaaacttgagctgaagggaactgaatcagatgagtttt |
300 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||| || |||| |||||||||||||||||||| || ||||| ||||| |
|
|
| T |
26155112 |
cgattttacctagtatttcaaatgaagttccatctttcatgttttcaacaccatcagggagaccaacttgagctgaagggaacttgataagatgtgtttt |
26155013 |
T |
|
| Q |
301 |
gatggagtatcctgaattgaagtcactgtctatagatttttggaatgttg |
350 |
Q |
| |
|
||| | ||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
26155012 |
gatagggtatcctgaattgaagtcactgtctatggatttttggaatgttg |
26154963 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 4 - 348
Target Start/End: Original strand, 19103588 - 19103932
Alignment:
| Q |
4 |
atgaggtctatacttcatgatcaaatgagctgcacagttggagaattggcttgagctgtaataatgaattcttggaatacctagttttgcagctgcttcc |
103 |
Q |
| |
|
||||||||||||||||||||| ||||| ||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
19103588 |
atgaggtctatacttcatgataaaatggaaaacacagttggagaagtagcttgagctgtaatagtgaattcttggaatacctagttttgcagctgcttcg |
19103687 |
T |
|
| Q |
104 |
actgtccacggatacgacatatcagtgactatacaatcaggttgaagatcttgaaacaaaatctcaattggattttggagcatcattactgcgcgggtga |
203 |
Q |
| |
|
|| ||||| | |||| | |||||| ||||||||||| ||| ||||||| ||||||| | |||| || |||| ||||||||||| || | | | | ||| |
|
|
| T |
19103688 |
acggtccaagcatacatctgatcagtaactatacaatctggtcgaagatcgtgaaacagattctcgataggatcttggagcatcaatattccactgctga |
19103787 |
T |
|
| Q |
204 |
ttttacctagtatttcaaatgaaattccatctttcatgttttcaacaccatctggaagacaaacttgagctgaagggaactgaatcagatgagttttgat |
303 |
Q |
| |
|
||||||| || ||||||| |||| |||||||||| ||||||||||||||||||||||||| |||||||||||||||||| |||| || ||||||||||| |
|
|
| T |
19103788 |
ttttaccaagcatttcaagtgaagttccatctttgatgttttcaacaccatctggaagaccaacttgagctgaagggaagggaataagttgagttttgat |
19103887 |
T |
|
| Q |
304 |
ggagtatcctgaattgaagtcactgtctatagatttttggaatgt |
348 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
19103888 |
ggagtatcctgaattgaagtcactgtctatggatttttggaatgt |
19103932 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 8 - 350
Target Start/End: Complemental strand, 26128669 - 26128327
Alignment:
| Q |
8 |
ggtctatacttcatgatcaaatgagctgcacagttggagaattggcttgagctgtaataatgaattcttggaatacctagttttgcagctgcttccactg |
107 |
Q |
| |
|
||||||||||||||||| ||||| |||||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||||||||||| || | |
|
|
| T |
26128669 |
ggtctatacttcatgataaaatgttctgcacagttggagaagtagcttgagctgttataatgaattcttggaatacctagttttgcagctgcttcgaccg |
26128570 |
T |
|
| Q |
108 |
tccacggatacgacatatcagtgactatacaatcaggttgaagatcttgaaacaaaatctcaattggattttggagcatcattactgcgcgggtgatttt |
207 |
Q |
| |
|
|||| ||| | |||||| || |||||||||||||||||||| |||||||||||| |||| |||||| ||| ||||| || | | || |||||| |
|
|
| T |
26128569 |
tccaaggaagcatcatatctgtcactatacaatcaggttgaaggtcttgaaacaaagcctcagttggatcttgaagcattgatattccaaggccgatttt |
26128470 |
T |
|
| Q |
208 |
acctagtatttcaaatgaaattccatctttcatgttttcaacaccatctggaagacaaacttgagctgaagggaactgaatcagatgagttttgatggag |
307 |
Q |
| |
|
||| | ||||| |||| |||||||||||||||||||||||||||| || |||| |||||||||||||||||||||||| || |||||||| |||||| |
|
|
| T |
26128469 |
accaataatttctgttgaagttccatctttcatgttttcaacaccatcagggagaccaacttgagctgaagggaactgaataagttgagttttaatggag |
26128370 |
T |
|
| Q |
308 |
tatcctgaattgaagtcactgtctatagatttttggaatgttg |
350 |
Q |
| |
|
|||||| || || |||||||||||| | |||||||||||||| |
|
|
| T |
26128369 |
tatcctaaactggtgtcactgtctatggctttttggaatgttg |
26128327 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 35 - 350
Target Start/End: Complemental strand, 26203969 - 26203654
Alignment:
| Q |
35 |
gcacagttggagaattggcttgagctgtaataatgaattcttggaatacctagttttgcagctgcttccactgtccacggatacgacatatcagtgacta |
134 |
Q |
| |
|
||||| |||||||| | ||||||||||||| | | ||| |||||||| |||||||||||||| ||| |||||||| ||||| | ||||||||| | || |
|
|
| T |
26203969 |
gcacaattggagaagtagcttgagctgtaaaagtaaatccttggaatgtttagttttgcagctgattcaactgtccaaggataagtcatatcagttatta |
26203870 |
T |
|
| Q |
135 |
tacaatcaggttgaagatcttgaaacaaaatctcaattggattttggagcatcattactgcgcgggtgattttacctagtatttcaaatgaaattccatc |
234 |
Q |
| |
|
||||||| ||||||||||||||||||| ||| |||||| ||| ||| |||||||||| | | | | |||||||| || ||||| | ||| ||||||| |
|
|
| T |
26203869 |
tacaatctggttgaagatcttgaaacagaatttcaatttgatcttgaagcatcattattccttgagctattttaccaagaatttctgaggaagttccatc |
26203770 |
T |
|
| Q |
235 |
tttcatgttttcaacaccatctggaagacaaacttgagctgaagggaactgaatcagatgagttttgatggagtatcctgaattgaagtcactgtctata |
334 |
Q |
| |
|
||| | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
26203769 |
tttgagattttcaacaccatctggaagacaaacttgagctgaagggaactgaataagatgagtcttgatggagtatcctgaattgaagtcactgtctatc |
26203670 |
T |
|
| Q |
335 |
gatttttggaatgttg |
350 |
Q |
| |
|
| ||||||||| |||| |
|
|
| T |
26203669 |
gctttttggaaggttg |
26203654 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 1 - 350
Target Start/End: Complemental strand, 26191374 - 26191025
Alignment:
| Q |
1 |
atcatgaggtctatacttcatgatcaaatgagctgcacagttggagaattggcttgagctgtaataatgaattcttggaatacctagttttgcagctgct |
100 |
Q |
| |
|
||||||||| ||||| |||||||| |||||| |||||| ||||||| | |||||||| ||| | ||||| |||||||| |||||||||||||||| |
|
|
| T |
26191374 |
atcatgaggcctatatttcatgataaaatgaaaggcacagctggagaagtaacttgagctataaaagtgaatccttggaatgtttagttttgcagctgct |
26191275 |
T |
|
| Q |
101 |
tccactgtccacggatacgacatatcagtgactatacaatcaggttgaagatcttgaaacaaaatctcaattggattttggagcatcattactgcgcggg |
200 |
Q |
| |
|
||||||||||| |||||| ||||||||||||||||||||| ||||||||||||| ||||| || |||||| |||| | | |||||| || | | ||| |
|
|
| T |
26191274 |
tccactgtccaaggatacatcatatcagtgactatacaatctggttgaagatctttaaacagaacctcaatcggatctcgaagcatcgatattccacggt |
26191175 |
T |
|
| Q |
201 |
tgattttacctagtatttcaaatgaaattccatctttcatgttttcaacaccatctggaagacaaacttgagctgaagggaactgaatcagatgagtttt |
300 |
Q |
| |
|
||||||||| || ||||| | || |||||||||| | |||||||||||||||||||||| |||||||||||||||||| | ||| ||||||||||| |
|
|
| T |
26191174 |
tgattttactaagaatttctgaggatgttccatctttgagattttcaacaccatctggaagaccaacttgagctgaagggaattcaataagatgagtttt |
26191075 |
T |
|
| Q |
301 |
gatggagtatcctgaattgaagtcactgtctatagatttttggaatgttg |
350 |
Q |
| |
|
||||||||||||| || |||||||||||||||| | |||||||||||||| |
|
|
| T |
26191074 |
gatggagtatcctaaactgaagtcactgtctatggttttttggaatgttg |
26191025 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 35 - 350
Target Start/End: Complemental strand, 26301886 - 26301571
Alignment:
| Q |
35 |
gcacagttggagaattggcttgagctgtaataatgaattcttggaatacctagttttgcagctgcttccactgtccacggatacgacatatcagtgacta |
134 |
Q |
| |
|
|||||||||||||| | ||||||||||||| | | || || ||||| ||||||| ||||| ||| |||||||| |||||| |||||| ||||||| |
|
|
| T |
26301886 |
gcacagttggagaagtagcttgagctgtaaaagtacatcctcggaatgttcagttttgaagctgattcaactgtccaaggatacagcatatcggtgacta |
26301787 |
T |
|
| Q |
135 |
tacaatcaggttgaagatcttgaaacaaaatctcaattggattttggagcatcattactgcg-cgggtgattttacctagtatttcaaatgaaattccat |
233 |
Q |
| |
|
||||||| |||||||| ||||||||||||| ||| |||| || |||||||||| || | || ||| |||||||||| |||||||||| |||| |||||| |
|
|
| T |
26301786 |
tacaatctggttgaagttcttgaaacaaaacctcgattgaatcttggagcatcggta-tccgacggctgattttaccaagtatttcaagtgaagttccat |
26301688 |
T |
|
| Q |
234 |
ctttcatgttttcaacaccatctggaagacaaacttgagctgaagggaactgaatcagatgagttttgatggagtatcctgaattgaagtcactgtctat |
333 |
Q |
| |
|
| || | ||||||||||||||| || |||| |||||||||||||||||||||||| || |||||||| || | ||||||||||||||||||| |||||| |
|
|
| T |
26301687 |
cattgaagttttcaacaccatcagggagaccaacttgagctgaagggaactgaataagttgagttttaatagggtatcctgaattgaagtcatcgtctat |
26301588 |
T |
|
| Q |
334 |
agatttttggaatgttg |
350 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
26301587 |
agatttttggaatgttg |
26301571 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 34 - 348
Target Start/End: Complemental strand, 26223608 - 26223294
Alignment:
| Q |
34 |
tgcacagttggagaattggcttgagctgtaataatgaattcttggaatacctagttttgcagctgcttccactgtccacggatacgacatatcagtgact |
133 |
Q |
| |
|
|||||| |||||||| | ||||||||||||| | | ||| |||||||| |||||||||||||| ||| |||||||| ||||| | |||||| || | | |
|
|
| T |
26223608 |
tgcacaattggagaagtagcttgagctgtaaaagtaaatccttggaatgtttagttttgcagctgattcaactgtccaaggataagtcatatccgttatt |
26223509 |
T |
|
| Q |
134 |
atacaatcaggttgaagatcttgaaacaaaatctcaattggattttggagcatcattactgcgcgggtgattttacctagtatttcaaatgaaattccat |
233 |
Q |
| |
|
|||||||| ||||||||||||||||||| ||| |||||| ||| ||| |||||||||| | | | | ||||| || || ||||| | | |||||| |
|
|
| T |
26223508 |
atacaatctggttgaagatcttgaaacagaatttcaatttgatcttgaagcatcattattccatgagaaattttcccaagaatttctctggtagttccat |
26223409 |
T |
|
| Q |
234 |
ctttcatgttttcaacaccatctggaagacaaacttgagctgaagggaactgaatcagatgagttttgatggagtatcctgaattgaagtcactgtctat |
333 |
Q |
| |
|
|||| |||||||||| |||||| || |||| || ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
26223408 |
ctttgatgttttcaataccatcagggagacctacctgagctgaagggaactgtataagatgagttttgatggagtatcctgaattgaagtcacagtctac |
26223309 |
T |
|
| Q |
334 |
agatttttggaatgt |
348 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
26223308 |
agatttttggaatgt |
26223294 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 36 - 345
Target Start/End: Complemental strand, 26242471 - 26242162
Alignment:
| Q |
36 |
cacagttggagaattggcttgagctgtaataatgaattcttggaatacctagttttgcagctgcttccactgtccacggatacgacatatcagtgactat |
135 |
Q |
| |
|
|||||| |||||| | |||||||||| || | ||||| ||||||||| |||||||||||||| |||||| ||||| |||||| ||||||||||||||| |
|
|
| T |
26242471 |
cacagtcggagaagtagcttgagctgcaaaagtgaatccttggaatatttagttttgcagctgattccacagtccaaggatacatcatatcagtgactat |
26242372 |
T |
|
| Q |
136 |
acaatcaggttgaagatcttgaaacaaaatctcaattggattttggagcatcattactgcgcgggtgattttacctagtatttcaaatgaaattccatct |
235 |
Q |
| |
|
|||||| ||||||||||||| ||||| || |||| | || || ||||||| |||| | || |||| ||||| || ||||| |||| | |||| |
|
|
| T |
26242371 |
acaatctggttgaagatctttaaacagaacttcaaaagaatctttgagcatccatactccacgagtgactttactaagcatttctcgtgaagtggcatcg |
26242272 |
T |
|
| Q |
236 |
ttcatgttttcaacaccatctggaagacaaacttgagctgaagggaactgaatcagatgagttttgatggagtatcctgaattgaagtcactgtctatag |
335 |
Q |
| |
|
||||||||||||| ||| || || |||| ||||||||| ||||||||||||| || ||||||||||||||||||||| || ||| ||||| ||||| | |
|
|
| T |
26242271 |
ttcatgttttcaataccttcagggagaccaacttgagcagaagggaactgaagaagttgagttttgatggagtatcctaaactgacatcactatctatgg |
26242172 |
T |
|
| Q |
336 |
atttttggaa |
345 |
Q |
| |
|
|||||||||| |
|
|
| T |
26242171 |
atttttggaa |
26242162 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 26087890 - 26087780
Alignment:
| Q |
1 |
atcatgaggtctatacttcatgatcaaatgagctgcacagttggagaattggcttgagctgtaataatgaattcttggaatacctagttttgcagctgct |
100 |
Q |
| |
|
|||||||||||||||||||||||| ||||| |||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
26087890 |
atcatgaggtctatacttcatgataaaatgttctgcacagttggagaagtagcttgagctgtaatagtgaattcttggaatacctagttttgcagctgct |
26087791 |
T |
|
| Q |
101 |
tccactgtcca |
111 |
Q |
| |
|
|| || ||||| |
|
|
| T |
26087790 |
tcgaccgtcca |
26087780 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 26111678 - 26111568
Alignment:
| Q |
1 |
atcatgaggtctatacttcatgatcaaatgagctgcacagttggagaattggcttgagctgtaataatgaattcttggaatacctagttttgcagctgct |
100 |
Q |
| |
|
|||||||||||||||||||||||| ||||| |||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
26111678 |
atcatgaggtctatacttcatgataaaatgttctgcacagttggagaagtagcttgagctgtaatagtgaattcttggaatacctagttttgcagctgct |
26111579 |
T |
|
| Q |
101 |
tccactgtcca |
111 |
Q |
| |
|
|| || ||||| |
|
|
| T |
26111578 |
tcgaccgtcca |
26111568 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 34 - 345
Target Start/End: Complemental strand, 26250921 - 26250610
Alignment:
| Q |
34 |
tgcacagttggagaattggcttgagctgtaataatgaattcttggaatacctagttttgcagctgcttccactgtccacggatacgacatatcagtgact |
133 |
Q |
| |
|
|||||| | |||||| | |||||||||| || | | ||| |||||||| |||||||||||||| ||| || ||||| |||||| |||||| || ||| |
|
|
| T |
26250921 |
tgcacattcggagaagtagcttgagctgcaaaagtaaatccttggaatgtttagttttgcagctgattctacagtccaaggatacttcatatctgtcact |
26250822 |
T |
|
| Q |
134 |
atacaatcaggttgaagatcttgaaacaaaatctcaattggattttggagcatcattactgcgcgggtgattttacctagtatttcaaatgaaattccat |
233 |
Q |
| |
|
|||||||| |||||||| |||||||| |||| ||||| | || | ||||||| |||| | || |||| ||||| || |||||| ||| | ||| |
|
|
| T |
26250821 |
atacaatctggttgaagttcttgaaataaaacttcaatagaatctctgagcatccatactccacgagtgactttactaagcatttcacgggaagtagcat |
26250722 |
T |
|
| Q |
234 |
ctttcatgttttcaacaccatctggaagacaaacttgagctgaagggaactgaatcagatgagttttgatggagtatcctgaattgaagtcactgtctat |
333 |
Q |
| |
|
| ||| |||||||||||| || || |||| ||||||||||||||| ||||||| || ||||||||||||||||||||| || ||| |||||| ||||| |
|
|
| T |
26250721 |
cgttcgagttttcaacaccgtcaggtagaccaacttgagctgaaggaaactgaagaagttgagttttgatggagtatcctaaactgatgtcactatctat |
26250622 |
T |
|
| Q |
334 |
agatttttggaa |
345 |
Q |
| |
|
||||||||||| |
|
|
| T |
26250621 |
ggatttttggaa |
26250610 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 134 - 350
Target Start/End: Complemental strand, 26082709 - 26082490
Alignment:
| Q |
134 |
atacaatcaggttgaagatcttgaaacaaaat---ctcaattggattttggagcatcattactgcgcgggtgattttacctagtatttcaaatgaaattc |
230 |
Q |
| |
|
||||||||||||||||| |||||||||||| | |||||| |||| ||||||||| || | | |||| ||||||| | ||||| |||| ||| |
|
|
| T |
26082709 |
atacaatcaggttgaagttcttgaaacaaattagcctcaatcggatcttggagcatggctattccacgggcaattttactaataatttctgttgaagttc |
26082610 |
T |
|
| Q |
231 |
catctttcatgttttcaacaccatctggaagacaaacttgagctgaagggaactgaatcagatgagttttgatggagtatcctgaattgaagtcactgtc |
330 |
Q |
| |
|
||||||| | ||||||||||||||| || |||| || |||| ||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26082609 |
catctttgaggttttcaacaccatcagggagacctacctgagatgacgggaactgaataagctgagttttgatggagtatcctgaattgaagtcactgtc |
26082510 |
T |
|
| Q |
331 |
tatagatttttggaatgttg |
350 |
Q |
| |
|
|| | |||||| ||||||| |
|
|
| T |
26082509 |
aatggctttttgaaatgttg |
26082490 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 134 - 350
Target Start/End: Complemental strand, 26106496 - 26106277
Alignment:
| Q |
134 |
atacaatcaggttgaagatcttgaaacaaaat---ctcaattggattttggagcatcattactgcgcgggtgattttacctagtatttcaaatgaaattc |
230 |
Q |
| |
|
||||||||||||||||| |||||||||||| | |||||| |||| ||||||||| || | | |||| ||||||| | ||||| |||| ||| |
|
|
| T |
26106496 |
atacaatcaggttgaagttcttgaaacaaattagcctcaatcggatcttggagcatggctattccacgggcaattttactaataatttctgttgaagttc |
26106397 |
T |
|
| Q |
231 |
catctttcatgttttcaacaccatctggaagacaaacttgagctgaagggaactgaatcagatgagttttgatggagtatcctgaattgaagtcactgtc |
330 |
Q |
| |
|
||||||| | ||||||||||||||| || |||| || |||| ||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26106396 |
catctttgaggttttcaacaccatcagggagacctacctgagatgacgggaactgaataagctgagttttgatggagtatcctgaattgaagtcactgtc |
26106297 |
T |
|
| Q |
331 |
tatagatttttggaatgttg |
350 |
Q |
| |
|
|| | |||||| ||||||| |
|
|
| T |
26106296 |
aatggctttttgaaatgttg |
26106277 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 213 - 350
Target Start/End: Complemental strand, 26240184 - 26240047
Alignment:
| Q |
213 |
gtatttcaaatgaaattccatctttcatgttttcaacaccatctggaagacaaacttgagctgaagggaactgaatcagatgagttttgatggagtatcc |
312 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||| || |||| ||||| || ||||||||| |||| || || ||||| || | |||| | |
|
|
| T |
26240184 |
gtatttcaaatgaagttccatctttcatgttttcaacaccatcagggagaccaacttaagttgaagggaattgaagaagttgggttttaatagggtatgc |
26240085 |
T |
|
| Q |
313 |
tgaattgaagtcactgtctatagatttttggaatgttg |
350 |
Q |
| |
|
||||||||||||||| ||||| | |||||||||||||| |
|
|
| T |
26240084 |
tgaattgaagtcactctctatggctttttggaatgttg |
26240047 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 52 - 288
Target Start/End: Complemental strand, 26259957 - 26259721
Alignment:
| Q |
52 |
gcttgagctgtaataatgaattcttggaatacctagttttgcagctgcttccactgtccacggatacgacatatcagtgactatacaatcaggttgaaga |
151 |
Q |
| |
|
||||||||||||||| | || ||||||| ||| ||||| || |||| ||| |||||||| ||||| ||||||||| |||||| ||||||||||||||| |
|
|
| T |
26259957 |
gcttgagctgtaatagtagatccttggaacaccgagtttcgctgctgattcaactgtccaaggatagaacatatcagagactatgcaatcaggttgaaga |
26259858 |
T |
|
| Q |
152 |
tcttgaaacaaaatctcaattggattttggagcatcattactgcgcgggtgattttacctagtatttcaaatgaaattccatctttcatgttttcaacac |
251 |
Q |
| |
|
|||||||||| ||| |||||| ||| ||| |||| | | | | ||||||||| || ||||| || ||| |||||||||| |||||||| |||| |
|
|
| T |
26259857 |
tcttgaaacagaatttcaatttgatcttgaagcaatgaaattccatgaccgattttaccaagcatttctaaggaagttccatctttgatgttttcgacac |
26259758 |
T |
|
| Q |
252 |
catctggaagacaaacttgagctgaagggaactgaat |
288 |
Q |
| |
|
| |||||||||| |||||| ||||||||||| ||||| |
|
|
| T |
26259757 |
cttctggaagaccaacttgtgctgaagggaattgaat |
26259721 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 16 - 172
Target Start/End: Complemental strand, 26207529 - 26207373
Alignment:
| Q |
16 |
cttcatgatcaaatgagctgcacagttggagaattggcttgagctgtaataatgaattcttggaatacctagttttgcagctgcttccactgtccacgga |
115 |
Q |
| |
|
|||| |||| || ||||||||||| | ||||| | ||||||||||||||| | || |||||||| || ||||||||||||| |||||||||||| ||| |
|
|
| T |
26207529 |
cttcttgataaagtgagctgcacaacttgagaagtagcttgagctgtaatagtaaagccttggaatgccgagttttgcagctgattccactgtccatgga |
26207430 |
T |
|
| Q |
116 |
tacgacatatcagtgactatacaatcaggttgaagatcttgaaacaaaatctcaatt |
172 |
Q |
| |
|
|| ||||||| | |||||||||||| ||||| ||||| | ||||||||||||||| |
|
|
| T |
26207429 |
tataacatatctgagactatacaatctggttggagatcacggaacaaaatctcaatt |
26207373 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 29 - 312
Target Start/End: Complemental strand, 26227051 - 26226768
Alignment:
| Q |
29 |
tgagctgcacagttggagaattggcttgagctgtaataatgaattcttggaatacctagttttgcagctgcttccactgtccacggatacgacatatcag |
128 |
Q |
| |
|
||||||||||| | ||||| | ||||||||||||||| | || || ||||| || |||||||||||| || ||||||||| ||| | ||||||| | |
|
|
| T |
26227051 |
tgagctgcacaacttgagaagtagcttgagctgtaatagtaaagcctaggaatgccgcgttttgcagctgattgcactgtccaaggaaataacatatctg |
26226952 |
T |
|
| Q |
129 |
tgactatacaatcaggttgaagatcttgaaacaaaatctcaattggattttggagcatcattactgcgcgggtgattttacctagtatttcaaatgaaat |
228 |
Q |
| |
|
|||||||||||| |||| ||||| || ||||||||||||||| ||| ||||| | || | | | | |||||||||| || |||||| ||| | |
|
|
| T |
26226951 |
agactatacaatcttgttggagatcatggaacaaaatctcaatttgatcttggatcttcgcaattccaagcatgattttaccaagcatttcacgggaagt |
26226852 |
T |
|
| Q |
229 |
tccatctttcatgttttcaacaccatctggaagacaaacttgagctgaagggaactgaatcagatgagttttgatggagtatcc |
312 |
Q |
| |
|
||||||| ||||||||||||||||||||||||| |||||| |||| |||||| ||||||| | || ||||||||| ||||| |
|
|
| T |
26226851 |
ggcatctttgatgttttcaacaccatctggaagaccaacttgggctgcagggaattgaatcacacaagctttgatggaatatcc |
26226768 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 34 - 345
Target Start/End: Complemental strand, 26297521 - 26297210
Alignment:
| Q |
34 |
tgcacagttggagaattggcttgagctgtaataatgaattcttggaatacctagttttgcagctgcttccactgtccacggatacgacatatcagtgact |
133 |
Q |
| |
|
|||||| | |||||| | ||||||||||||| | | ||| |||||||| |||||||||||||| |||||| ||||| || || |||||| || ||| |
|
|
| T |
26297521 |
tgcacaataggagaagtagcttgagctgtaaaagtcaatccttggaatgtttagttttgcagctgattccacagtccaagggtatttcatatctgtcact |
26297422 |
T |
|
| Q |
134 |
atacaatcaggttgaagatcttgaaacaaaatctcaattggattttggagcatcattactgcgcgggtgattttacctagtatttcaaatgaaattccat |
233 |
Q |
| |
|
|||||||| |||||||| |||| ||| | || ||||| | | ||||||||| ||||| | ||||||||| | || ||||||| |||| | ||| |
|
|
| T |
26297421 |
atacaatctggttgaagttctttaaatagaacttcaatagattgctggagcatccttactccaatcgtgattttaacaagcatttcaagtgaagtggcat |
26297322 |
T |
|
| Q |
234 |
ctttcatgttttcaacaccatctggaagacaaacttgagctgaagggaactgaatcagatgagttttgatggagtatcctgaattgaagtcactgtctat |
333 |
Q |
| |
|
| || ||||||||| ||| ||||| |||| ||||| | || ||||||||||| || | ||||||||||||||||||| || ||| |||||| ||||| |
|
|
| T |
26297321 |
cgatcgtgttttcaataccctctgggagaccaacttcatttgcagggaactgaagaagtttagttttgatggagtatcctaaactgatgtcactatctat |
26297222 |
T |
|
| Q |
334 |
agatttttggaa |
345 |
Q |
| |
|
||||||||||| |
|
|
| T |
26297221 |
ggatttttggaa |
26297210 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 231 - 312
Target Start/End: Complemental strand, 26207314 - 26207233
Alignment:
| Q |
231 |
catctttcatgttttcaacaccatctggaagacaaacttgagctgaagggaactgaatcagatgagttttgatggagtatcc |
312 |
Q |
| |
|
||||||| |||||||||||||||||||| |||| ||||| ||| |||||| ||||||| | |||||||||||| ||||| |
|
|
| T |
26207314 |
catctttgatgttttcaacaccatctgggagacctacttgggctccagggaattgaatcacacaagttttgatggaatatcc |
26207233 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 350
Target Start/End: Complemental strand, 44903359 - 44903001
Alignment:
| Q |
1 |
atcatgaggtctatacttcatgatcaaatgagctgcacagttggagaattggcttgagctgtaataatgaattcttggaatacctagttttgcagctgct |
100 |
Q |
| |
|
|||||||||||||||||| | | |||| | |||||| |||||||| | ||||||||||||||||| || || ||||| | |||||||||||||| | |
|
|
| T |
44903359 |
atcatgaggtctatactttctaacaaaataacatgcacaattggagaagtagcttgagctgtaataataaagcctaggaatgcttagttttgcagctgat |
44903260 |
T |
|
| Q |
101 |
tccactgtccacggatacgacatatcagtgactatacaatcaggttgaagatcttgaaacaaaatctcaattggattttggagcatcattactgcgcggg |
200 |
Q |
| |
|
||||| ||||| ||| | ||||||||| ||||||||||| ||||||||||||||||||| | |||||| |||| | |||||| | | | | | |
|
|
| T |
44903259 |
tccacagtccaaggaatcatcatatcagttactatacaatctggttgaagatcttgaaacattacctcaataggatctctgagcattaacattccatgac |
44903160 |
T |
|
| Q |
201 |
tgattttacctagtatttcaaatgaaattccatctttca------tg---ttttcaacaccatctggaagacaaacttgagctgaagggaactgaatcag |
291 |
Q |
| |
|
|||||||||| || ||||| || |||||||||| | || ||||||| ||||| ||||||| |||||| | ||||||||||||||| || |
|
|
| T |
44903159 |
tgattttaccaagcatttctggggatgttccatctttaacatctttgacattttcaattccatcaggaagaccaacttgggatgaagggaactgaataag |
44903060 |
T |
|
| Q |
292 |
atgagttttgatggagtatcctgaattgaagtcactgtctatagatttttggaatgttg |
350 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||| |||| |||||| |||| |
|
|
| T |
44903059 |
ctgagttttgatagagtatcctgaattgaagtcactgtctatggattcttggaaagttg |
44903001 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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