View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8551_low_34 (Length: 243)

Name: NF8551_low_34
Description: NF8551
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8551_low_34
NF8551_low_34
[»] chr5 (3 HSPs)
chr5 (21-119)||(33366373-33366472)
chr5 (113-167)||(33366300-33366354)
chr5 (169-224)||(7604335-7604390)
[»] chr6 (4 HSPs)
chr6 (145-223)||(32650125-32650204)
chr6 (125-221)||(9605378-9605476)
chr6 (118-164)||(26478532-26478578)
chr6 (106-223)||(20703433-20703552)
[»] chr1 (7 HSPs)
chr1 (116-224)||(42074135-42074245)
chr1 (125-224)||(21945069-21945170)
chr1 (105-207)||(50692076-50692181)
chr1 (125-200)||(4604890-4604967)
chr1 (168-213)||(27559967-27560012)
chr1 (106-195)||(38173474-38173566)
chr1 (126-166)||(50267088-50267128)
[»] chr4 (7 HSPs)
chr4 (116-221)||(32125340-32125447)
chr4 (125-221)||(52280878-52280976)
chr4 (125-166)||(27990364-27990405)
chr4 (123-201)||(51333454-51333529)
chr4 (116-163)||(32125429-32125476)
chr4 (169-224)||(36619598-36619653)
chr4 (123-224)||(47493210-47493313)
[»] chr2 (7 HSPs)
chr2 (126-222)||(11385782-11385880)
chr2 (116-223)||(472414-472523)
chr2 (125-224)||(37287182-37287283)
chr2 (169-221)||(32082146-32082198)
chr2 (108-164)||(33853824-33853880)
chr2 (127-163)||(40363232-40363268)
chr2 (127-163)||(44587656-44587692)
[»] chr8 (3 HSPs)
chr8 (123-206)||(43447890-43447975)
chr8 (124-210)||(30857239-30857327)
chr8 (125-223)||(4578217-4578318)
[»] chr3 (2 HSPs)
chr3 (125-221)||(27786467-27786565)
chr3 (116-195)||(36443929-36444010)
[»] chr7 (1 HSPs)
chr7 (127-163)||(3967796-3967832)


Alignment Details
Target: chr5 (Bit Score: 84; Significance: 5e-40; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 21 - 119
Target Start/End: Complemental strand, 33366472 - 33366373
Alignment:
Q  21 aacggagcaaggtgttgactactatctcgtttgatgtt-cttctgcaaggtcataaatgaggcagtcgtgtacaaaattctcacttacatactacatccg 119  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||    
T  33366472 aacggagcaaggtgttgactactatctcgtttgatgtttcttctgcaaggtcataaatgaggcattcatgtacaaaattctcacttacatactacatccg 33366373  T

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Target: chr5; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 113 - 167
Target Start/End: Complemental strand, 33366354 - 33366300
Alignment:
Q  113 acatccggttatatttataagcaaaatactactttttaggttgattgaatactta 167  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  33366354 acatccggttatatttataagcaaaatactactttttaggttgactgaatactta 33366300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 224
Target Start/End: Original strand, 7604335 - 7604390
Alignment:
Q  169 tatttgatatatattatagactaaatatattaggtattcaattaacttaaaaaata 224  Q
    |||||||||| |||||||||   |||| |||||||||||||| |||||||||||||    
T  7604335 tatttgatatgtattatagatcgaatacattaggtattcaataaacttaaaaaata 7604390  T

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Target: chr6 (Bit Score: 48; Significance: 1e-18; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 145 - 223
Target Start/End: Complemental strand, 32650204 - 32650125
Alignment:
Q  145 tttttaggttgattgaatactta-gtatttgatatatattatagactaaatatattaggtattcaattaacttaaaaaat 223  Q
    |||||||||||||||||||| || ||||||| |||||| |||||||||||||||||||||||||||| ||  ||||||||    
T  32650204 tttttaggttgattgaatacctatgtatttggtatataatatagactaaatatattaggtattcaataaatctaaaaaat 32650125  T

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Target: chr6; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 125 - 221
Target Start/End: Original strand, 9605378 - 9605476
Alignment:
Q  125 atttataagcaaaatactactttttaggttgattgaatactta--gtatttgatatatattatagactaaatatattaggtattcaattaacttaaaaa 221  Q
    |||||||||||||| || ||||||||  || ||||||||||||  |||||||||||||||||||||| ||||| ||||||| || | | ||||||||||    
T  9605378 atttataagcaaaaaacaactttttaatttaattgaatacttaatgtatttgatatatattatagaccaaatacattaggtgttgagtgaacttaaaaa 9605476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 118 - 164
Target Start/End: Complemental strand, 26478578 - 26478532
Alignment:
Q  118 cggttatatttataagcaaaatactactttttaggttgattgaatac 164  Q
    |||||| |||||||||||||| ||||||||||||||| |||||||||    
T  26478578 cggttacatttataagcaaaacactactttttaggtttattgaatac 26478532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 223
Target Start/End: Complemental strand, 20703552 - 20703433
Alignment:
Q  106 acatactacatccggttatatttataagcaaaatactactttttaggttgattgaatactta--gtatttgatatatattatagactaaatatattaggt 203  Q
    ||||||||| |  ||| ||||||||| ||||||   ||| |||| |||| |||||||| |||  ||||||| | |||||||||||| ||||| ||||  |    
T  20703552 acatactactttaggtcatatttatatgcaaaaatttacatttttggttcattgaatatttaatgtatttggtctatattatagaccaaatacattaaat 20703453  T
Q  204 attcaattaacttaaaaaat 223  Q
    ||||||| ||| ||||||||    
T  20703452 attcaatgaacctaaaaaat 20703433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 48; Significance: 1e-18; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 116 - 224
Target Start/End: Original strand, 42074135 - 42074245
Alignment:
Q  116 tccggttatatttataagcaaaatactactttttaggttgattgaatactta--gtatttgatatatattatagactaaatatattaggtattcaattaa 213  Q
    |||||| |||||||||||||||| | |||||||||  || |||| |||||||  ||||||| ||||||| |||||| |||||||||||| ||||||| ||    
T  42074135 tccggtcatatttataagcaaaaaattactttttaaattcattggatacttaatgtatttggtatatataatagaccaaatatattaggcattcaatgaa 42074234  T
Q  214 cttaaaaaata 224  Q
    | |||||||||    
T  42074235 cctaaaaaata 42074245  T

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Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 125 - 224
Target Start/End: Original strand, 21945069 - 21945170
Alignment:
Q  125 atttataagcaaaatactactttttaggttgattgaatactta--gtatttgatatatattatagactaaatatattaggtattcaattaacttaaaaaa 222  Q
    ||||||||| |||| |  ||||||||| || ||||||||| ||  ||||||| |||||||||||||| ||||| ||||||| || ||| ||| |||||||    
T  21945069 atttataagtaaaaaatcactttttagattcattgaatacctaatgtatttggtatatattatagaccaaatacattaggtgttgaatgaacctaaaaaa 21945168  T
Q  223 ta 224  Q
    ||    
T  21945169 ta 21945170  T

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Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 105 - 207
Target Start/End: Original strand, 50692076 - 50692181
Alignment:
Q  105 tacatactacatccggttatatttataagcaaaata-ctactttttaggttgattgaatactta--gtatttgatatatattatagactaaatatattag 201  Q
    |||||||| | |||||| | |||||||||||||| | |||||||||||||| ||| ||||| ||  ||||||| |||||||||||||  ||||| ||||     
T  50692076 tacatacttcctccggtcacatttataagcaaaaaaactactttttaggttcattaaatacctaatgtatttggtatatattatagatcaaatacattac 50692175  T
Q  202 gtattc 207  Q
    ||||||    
T  50692176 gtattc 50692181  T

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Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 200
Target Start/End: Complemental strand, 4604967 - 4604890
Alignment:
Q  125 atttataagcaaaatactactttttaggttgattgaatactta--gtatttgatatatattatagactaaatatatta 200  Q
    |||||||||||||| |  |||||||||||| ||||||||| ||  ||||||| ||||||||||| || ||||| ||||    
T  4604967 atttataagcaaaaaatcactttttaggtttattgaatacctaatgtatttggtatatattataaaccaaatacatta 4604890  T

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Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 213
Target Start/End: Complemental strand, 27560012 - 27559967
Alignment:
Q  168 gtatttgatatatattatagactaaatatattaggtattcaattaa 213  Q
    ||||||||||||||||||| || ||||| ||||| |||||||||||    
T  27560012 gtatttgatatatattataaaccaaatacattagatattcaattaa 27559967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 106 - 195
Target Start/End: Complemental strand, 38173566 - 38173474
Alignment:
Q  106 acatactacatccggttatatttataagcaaaatactactttttaggttgattg-aatactta--gtatttgatatatattatagactaaata 195  Q
    ||||||| ||||| || | |||||||||||||| | || |||||||||| |||| ||||||||  ||||||| | |||| |||||||||||||    
T  38173566 acatactccatccagtcacatttataagcaaaaaagtattttttaggttcattgaaatacttaatgtatttggtttataatatagactaaata 38173474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 166
Target Start/End: Complemental strand, 50267128 - 50267088
Alignment:
Q  126 tttataagcaaaatactactttttaggttgattgaatactt 166  Q
    ||||||||||||| |||||||||| |||| |||||||||||    
T  50267128 tttataagcaaaacactactttttgggttcattgaatactt 50267088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 45; Significance: 9e-17; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 116 - 221
Target Start/End: Original strand, 32125340 - 32125447
Alignment:
Q  116 tccggttatatttataagcaaaatactactttttaggttgattgaatactta--gtatttgatatatattatagactaaatatattaggtattcaattaa 213  Q
    |||||| ||||||||||||||||  ||||||||| |||| ||||||||||||  ||| ||| |||||||||||||| | ||| ||||| |||||||| ||    
T  32125340 tccggtcatatttataagcaaaacgctacttttttggttcattgaatacttaatgtacttggtatatattatagaccacatacattagatattcaatgaa 32125439  T
Q  214 cttaaaaa 221  Q
    | ||||||    
T  32125440 cctaaaaa 32125447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 221
Target Start/End: Original strand, 52280878 - 52280976
Alignment:
Q  125 atttataagcaaaatactactttttaggttgattgaatactta--gtatttgatatatattatagactaaatatattaggtattcaattaacttaaaaa 221  Q
    ||||| |||||||| | ||||||||||||| ||||||||||||  | ||||||||| ||| |||||| ||||| |||| ||| ||||| ||| ||||||    
T  52280878 atttacaagcaaaacaatactttttaggttcattgaatacttaatgaatttgatatgtatcatagaccaaatacattaagtactcaatgaacctaaaaa 52280976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 166
Target Start/End: Complemental strand, 27990405 - 27990364
Alignment:
Q  125 atttataagcaaaatactactttttaggttgattgaatactt 166  Q
    |||||||||||||| ||||||||||||||| |||||||||||    
T  27990405 atttataagcaaaacactactttttaggttcattgaatactt 27990364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 201
Target Start/End: Original strand, 51333454 - 51333529
Alignment:
Q  123 atatttataagcaaaatactactttttaggttgattgaatacttagtatttgatatatattatagactaaatatattag 201  Q
    |||||||||| ||||| |||||||||||  || |||||||||   ||||||  |||||||||||||| |||||||||||    
T  51333454 atatttataaacaaaaaactactttttaaatttattgaatac---gtatttagtatatattatagaccaaatatattag 51333529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 163
Target Start/End: Complemental strand, 32125476 - 32125429
Alignment:
Q  116 tccggttatatttataagcaaaatactactttttaggttgattgaata 163  Q
    |||||| ||||||||||||||||  |||||||||||||| ||||||||    
T  32125476 tccggtcatatttataagcaaaaatctactttttaggttcattgaata 32125429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 224
Target Start/End: Complemental strand, 36619653 - 36619598
Alignment:
Q  169 tatttgatatatattatagactaaatatattaggtattcaattaacttaaaaaata 224  Q
    |||||| ||||||||||| || |||||||||||||||||| | ||| |||||||||    
T  36619653 tatttggtatatattatacaccaaatatattaggtattcattaaacctaaaaaata 36619598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 224
Target Start/End: Original strand, 47493210 - 47493313
Alignment:
Q  123 atatttataagcaaaatactactttttaggttgattgaatactta--gtatttgatatatattatagactaaatatattaggtattcaattaacttaaaa 220  Q
    ||||||||||| |||| |||||||||||| || ||||||||| ||  ||||||| | ||||  ||| |||||| | |||||||||| | |||||  ||||    
T  47493210 atatttataagtaaaaaactactttttagatttattgaatacctaatgtatttggtctataacatatactaaacacattaggtatttatttaaccgaaaa 47493309  T
Q  221 aata 224  Q
    ||||    
T  47493310 aata 47493313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 4e-16; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 126 - 222
Target Start/End: Complemental strand, 11385880 - 11385782
Alignment:
Q  126 tttataagcaaaatactactttttaggttgattgaatacttagt--atttgatatatattatagactaaatatattaggtattcaattaacttaaaaaa 222  Q
    ||||||||||||| | || |||||| ||| | |||||||||| |  |||||||||||||||||||| |||||| |||| |||||||| |||||||||||    
T  11385880 tttataagcaaaacattattttttacgttcactgaatacttaatgcatttgatatatattatagaccaaatattttagatattcaataaacttaaaaaa 11385782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 223
Target Start/End: Original strand, 472414 - 472523
Alignment:
Q  116 tccggttatatttataagcaaaatactactttttaggttgattgaatactta--gtatttgat-atatattatagactaaatatattaggtattcaatta 212  Q
    |||||| | |||||||| |||||||  |||||||||||| ||||||||  ||  ||||||| | |||| |||||||| ||||||||||| ||||||||||    
T  472414 tccggtcacatttataaacaaaatataactttttaggtttattgaataactaatgtatttggtcatat-ttatagaccaaatatattagttattcaatta 472512  T
Q  213 acttaaaaaat 223  Q
    || ||||||||    
T  472513 acctaaaaaat 472523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 224
Target Start/End: Original strand, 37287182 - 37287283
Alignment:
Q  125 atttataagcaaaatactactttttaggttgattgaatactta--gtatttgatatatattatagactaaatatattaggtattcaattaacttaaaaaa 222  Q
    ||||||||| || | | ||||||| ||||| ||||||||| ||  |||||| |||||| ||||| || ||||||||| | |||| ||| |||||||||||    
T  37287182 atttataagtaacaaaatacttttaaggttcattgaatacataatgtatttaatatattttataaaccaaatatatttgatatttaatgaacttaaaaaa 37287281  T
Q  223 ta 224  Q
    ||    
T  37287282 ta 37287283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 32082146 - 32082198
Alignment:
Q  169 tatttgatatatattatagactaaatatattaggtattcaattaacttaaaaa 221  Q
    |||||| |||||||||||||| ||||||||||| | || ||| ||||||||||    
T  32082146 tatttggtatatattatagaccaaatatattagatgttgaataaacttaaaaa 32082198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 164
Target Start/End: Original strand, 33853824 - 33853880
Alignment:
Q  108 atactacatccggttatatttataagcaaaatactactttttaggttgattgaatac 164  Q
    ||||| |||||||| |||||||||| |||||   ||||||||||||| |||||||||    
T  33853824 atacttcatccggtcatatttataaacaaaaatgtactttttaggttcattgaatac 33853880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 163
Target Start/End: Original strand, 40363232 - 40363268
Alignment:
Q  127 ttataagcaaaatactactttttaggttgattgaata 163  Q
    |||||||||||| ||||||||||||||| ||||||||    
T  40363232 ttataagcaaaaaactactttttaggttcattgaata 40363268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 163
Target Start/End: Original strand, 44587656 - 44587692
Alignment:
Q  127 ttataagcaaaatactactttttaggttgattgaata 163  Q
    ||||||||||||||||| |||||||||| ||||||||    
T  44587656 ttataagcaaaatactattttttaggttcattgaata 44587692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 123 - 206
Target Start/End: Complemental strand, 43447975 - 43447890
Alignment:
Q  123 atatttataagcaaaatactactttttaggttgattgaatactta--gtatttgatatatattatagactaaatatattaggtatt 206  Q
    ||||||||||  ||||||||||||||||| || ||||||||| ||  ||| |||||||||||||||||||||||| |||| |||||    
T  43447975 atatttataaataaaatactactttttagattcattgaatacataatgtacttgatatatattatagactaaataaattaagtatt 43447890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 124 - 210
Target Start/End: Original strand, 30857239 - 30857327
Alignment:
Q  124 tatttataagcaaaatactactttttaggttgattgaatactta--gtatttgatatatattatagactaaatatattaggtattcaat 210  Q
    |||||||| ||||||||||||||||||| || |||||||| |||  ||||||| ||||||||||| |  |||||||||||| |||||||    
T  30857239 tatttatatgcaaaatactactttttagattcattgaatatttaatgtatttggtatatattatacatcaaatatattaggcattcaat 30857327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 125 - 223
Target Start/End: Complemental strand, 4578318 - 4578217
Alignment:
Q  125 atttataagcaaaatact-actttttaggttgattgaatactta--gtatttgatatatattatagactaaatatattaggtattcaattaacttaaaaa 221  Q
    |||||||||||||| | | |||||||||||| ||||||||| ||  |||||| ||||||||||||||| ||||| ||||||| || ||| ||| ||||||    
T  4578318 atttataagcaaaaaaatcactttttaggttcattgaatacctaatgtatttcatatatattatagaccaaatacattaggtgttgaatgaacctaaaaa 4578219  T
Q  222 at 223  Q
    ||    
T  4578218 at 4578217  T

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Target: chr3 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 125 - 221
Target Start/End: Original strand, 27786467 - 27786565
Alignment:
Q  125 atttataagcaaaatactactttttaggttgattgaatac--ttagtatttgatatatattatagactaaatatattaggtattcaattaacttaaaaa 221  Q
    |||||||||||||| ||||||||||||||| |  ||||||  |  ||||||| | |||| ||||||| |||||||||||||||||||| ||| ||||||    
T  27786467 atttataagcaaaaaactactttttaggttcacggaataccctatgtatttggtgtataatatagaccaaatatattaggtattcaatgaacctaaaaa 27786565  T

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Target: chr3; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 195
Target Start/End: Complemental strand, 36444010 - 36443929
Alignment:
Q  116 tccggttatatttataagcaaaatactactttttaggttgattgaatactta--gtatttgatatatattatagactaaata 195  Q
    |||||| |||||||||||||||| | |  |||||||||| ||||||||| ||  ||||||||| |||| ||||||| |||||    
T  36444010 tccggtcatatttataagcaaaaaatttatttttaggttcattgaatacctaacgtatttgatttataatatagaccaaata 36443929  T

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Target: chr7 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 163
Target Start/End: Complemental strand, 3967832 - 3967796
Alignment:
Q  127 ttataagcaaaatactactttttaggttgattgaata 163  Q
    |||||||||||| ||||||||||||||| ||||||||    
T  3967832 ttataagcaaaaaactactttttaggttcattgaata 3967796  T

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