View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8553_high_5 (Length: 370)

Name: NF8553_high_5
Description: NF8553
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8553_high_5
NF8553_high_5
[»] chr1 (4 HSPs)
chr1 (17-344)||(29452518-29452845)
chr1 (25-323)||(29467013-29467311)
chr1 (30-334)||(29423882-29424186)
chr1 (81-325)||(29442545-29442789)
[»] chr2 (23 HSPs)
chr2 (30-309)||(14550988-14551266)
chr2 (172-323)||(10336621-10336772)
chr2 (130-257)||(8572755-8572882)
chr2 (156-276)||(10372676-10372796)
chr2 (149-254)||(9292715-9292820)
chr2 (161-276)||(9321790-9321905)
chr2 (156-257)||(9316816-9316920)
chr2 (173-257)||(9283428-9283512)
chr2 (154-254)||(10353937-10354037)
chr2 (181-276)||(9329418-9329513)
chr2 (182-257)||(12011847-12011922)
chr2 (179-276)||(10348620-10348717)
chr2 (201-276)||(9060333-9060408)
chr2 (172-277)||(9275333-9275438)
chr2 (181-246)||(9357935-9358000)
chr2 (182-255)||(12018170-12018243)
chr2 (201-257)||(9365434-9365490)
chr2 (172-255)||(7114901-7114984)
chr2 (182-288)||(7612716-7612822)
chr2 (171-257)||(12005419-12005505)
chr2 (187-257)||(11986779-11986849)
chr2 (182-289)||(8578747-8578854)
chr2 (189-288)||(17565337-17565436)
[»] chr8 (1 HSPs)
chr8 (106-257)||(41965976-41966130)
[»] scaffold0667 (1 HSPs)
scaffold0667 (153-276)||(5250-5373)
[»] chr3 (1 HSPs)
chr3 (133-313)||(37463293-37463473)
[»] chr4 (1 HSPs)
chr4 (154-257)||(26575671-26575774)
[»] chr5 (1 HSPs)
chr5 (187-267)||(36225575-36225655)


Alignment Details
Target: chr1 (Bit Score: 308; Significance: 1e-173; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 308; E-Value: 1e-173
Query Start/End: Original strand, 17 - 344
Target Start/End: Complemental strand, 29452845 - 29452518
Alignment:
Q  17 ttggtggtaatgaagagaaggccgttacatgaactgaacatagagatgttgttgttggggagtttgaaaggaagattgagtttaatgcgggtggttaggt 116  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29452845 ttggtggtaatgaagagaaggccgttacatgaactgaacagagagatgttgttgttggggagtttgaaaggaagattgagtttaatgcgggtggttaggt 29452746  T
Q  117 tagagaaatcgttgatttggtagaaaacagagttgtgtcgaagaattaaggaacgattgagggaattttggaggtgaagtttgatgaagttgtgagaatc 216  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29452745 tagagaaatcgttgatttggtagaaaacagagttgtgtcgaaggattaaggaacgattgagggaattttggaggtgaagtttgatgaagttgtgagaatc 29452646  T
Q  217 gattagggattgaagtgattttgaggttgaacggaatcggatgagggattgtaccggtaacagagagaggataccggtgagtatctcaggcggaagatcc 316  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  29452645 gattagggattgaagtgattttgaggttgaacggaatcggaggagggattgtaccggtaacagagagaggataccggtaagtatctccggcggaagatcc 29452546  T
Q  317 gccattggagcttggaaggaaggaaggg 344  Q
    ||||||||||||||||||||||||||||    
T  29452545 gccattggagcttggaaggaaggaaggg 29452518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 25 - 323
Target Start/End: Complemental strand, 29467311 - 29467013
Alignment:
Q  25 aatgaagagaaggccgttacatgaactgaacatagagatgttgttgttggggagtttgaaaggaagattgagtttaatgcgggtggttaggttagagaaa 124  Q
    |||| ||||||||||||||||||||| ||||| |||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  29467311 aatgcagagaaggccgttacatgaaccgaacagagagatgaagttgttggggattttgaaaggaagattgagtttaatgcgggtggttaggttagagaaa 29467212  T
Q  125 tcgttgatttggtagaaaacagagttgtgtcgaagaattaaggaacgattgagggaattttggaggtgaagtttgatgaagttgtgagaatcgattaggg 224  Q
    |||||||||||||||||| | |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  29467211 tcgttgatttggtagaaatcggagttgtgtcgaaggattaagaaacgattgagggaatttcggaggtgaagtttgatgaagttgtgggaatcgattaggg 29467112  T
Q  225 attgaagtgattttgaggttgaacggaatcggatgagggattgtaccggtaacagagagaggataccggtgagtatctcaggcggaagatccgccattg 323  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||| ||| || || |||||||| |||||||    
T  29467111 attgaagtgattttgaggttgaacggaatcggaggagggattgtaccggtaacagagagatgattccggtgattatttccggaggaagatcagccattg 29467013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 30 - 334
Target Start/End: Original strand, 29423882 - 29424186
Alignment:
Q  30 agagaaggccgttacatgaactgaacatagagatgttgttgttggggagtttgaaaggaagattgagtttaatgcgggtggttaggttagagaaatcgtt 129  Q
    ||||||||||||||||||| | || || |||||||  |||||||| |  |||||||||| |||||||||||| |  ||| ||||||||||||||||||||    
T  29423882 agagaaggccgttacatgatccgaccagagagatgaagttgttggagcctttgaaaggaggattgagtttaacggcggtagttaggttagagaaatcgtt 29423981  T
Q  130 gatttggtagaaaacagagttgtgtcgaagaattaaggaacgattgagggaattttggaggtgaagtttgatgaagttgtgagaatcgattagggattga 229  Q
    ||||||||||||| |||||||||||||||| |||||||||||||||| |||||| ||||||||||| ||||||||| |||| ||||||||||| ||||||    
T  29423982 gatttggtagaaatcagagttgtgtcgaaggattaaggaacgattgaaggaattatggaggtgaagcttgatgaagctgtgggaatcgattagagattga 29424081  T
Q  230 agtgattttgaggttgaacggaatcggatgagggattgtaccggtaacagagagaggataccggtgagtatctcaggcggaagatccgccattggagctt 329  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| |||||||||||    
T  29424082 agtgattttgaggttgaacggaatcggaggagggattgtaccggtaacagagagaggattccggtgagtatctccggcggaagatccgtcattggagctt 29424181  T
Q  330 ggaag 334  Q
    |||||    
T  29424182 ggaag 29424186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 81 - 325
Target Start/End: Complemental strand, 29442789 - 29442545
Alignment:
Q  81 tgaaaggaagattgagtttaatgcgggtggttaggttagagaaatcgttgatttggtagaaaacagagttgtgtcgaagaattaaggaacgattgaggga 180  Q
    |||||||||  |||||||||| || ||||||||||||||||||||| | ||||||||||||| || ||||||||||||| |||||||||||||||||| |    
T  29442789 tgaaaggaatgttgagtttaacgccggtggttaggttagagaaatcttcgatttggtagaaatcaaagttgtgtcgaaggattaaggaacgattgaggaa 29442690  T
Q  181 attttggaggtgaagtttgatgaagttgtgagaatcgattagggattgaagtgattttgaggttgaacggaatcggatgagggattgtaccggtaacaga 280  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||||||||||| || |||||||||||||||| |||||||||| |||||||||||    
T  29442689 attttggaggtgaagtttgatgaagttatgggaatcgattagggattgaagtgatttcgacgttgaacggaatcggaggagggattgtgccggtaacaga 29442590  T
Q  281 gagaggataccggtgagtatctcaggcggaagatccgccattgga 325  Q
    |||||||| ||||| |||||||| |||||||||||| ||||||||    
T  29442589 gagaggattccggtaagtatctccggcggaagatccaccattgga 29442545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 156; Significance: 8e-83; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 30 - 309
Target Start/End: Original strand, 14550988 - 14551266
Alignment:
Q  30 agagaaggccgttacatgaactgaacatagagatgttgttgttggggagtttgaaaggaagattgagtttaatgcgggtggttaggttagagaaatcgtt 129  Q
    ||||||| ||||||||||||| || || |||||||  |||||||  |  || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  14550988 agagaagaccgttacatgaaccgagcagagagatgaagttgttgaagccttcgaaaggaagattgagtttaatgcgggtggttaggttagagaaatcgtt 14551087  T
Q  130 gatttggtagaaaacagagttgtgtcgaagaattaaggaacgattgagggaattttggaggtgaagtttgatgaagttgtgagaatcgattagggattga 229  Q
    ||||||||||| |   || ||||||||||| |||||||||| ||||||||||||||  ||||||||||||||||||||||| ||||||||||||||||||    
T  14551088 gatttggtagagattggacttgtgtcgaaggattaaggaacaattgagggaattttt-aggtgaagtttgatgaagttgtgggaatcgattagggattga 14551186  T
Q  230 agtgattttgaggttgaacggaatcggatgagggattgtaccggtaacagagagaggataccggtgagtatctcaggcgg 309  Q
    ||||||||||| ||||| |||||| ||| ||||||||||  |||||||||||||||||| | |||||||||||| |||||    
T  14551187 agtgattttgaagttgatcggaattggaggagggattgtggcggtaacagagagaggattctggtgagtatctccggcgg 14551266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 172 - 323
Target Start/End: Original strand, 10336621 - 10336772
Alignment:
Q  172 attgagggaattttggaggtgaagtttgatgaagttgtgagaatcgattagggattgaagtgattttgaggttgaacggaatcggatgagggattgtacc 271  Q
    ||||||||||||||| |||||||| |||||||| |||||||||||||||| ||||| |||||||||||||||||| ||||||||||  || |||| ||||    
T  10336621 attgagggaattttgaaggtgaaggttgatgaatttgtgagaatcgattaaggatttaagtgattttgaggttgatcggaatcggagaagtgattttacc 10336720  T
Q  272 ggtaacagagagaggataccggtgagtatctcaggcggaagatccgccattg 323  Q
    |||||  | |||| |||  ||| ||| || || |||||||||||||||||||    
T  10336721 ggtaaacgggagaagatttcggagagaatttccggcggaagatccgccattg 10336772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 130 - 257
Target Start/End: Complemental strand, 8572882 - 8572755
Alignment:
Q  130 gatttggtagaaaacagagttgtgtcgaagaattaaggaacgattgagggaattttggaggtgaagtttgatgaagttgtgagaatcgattagggattga 229  Q
    ||||||||||| | |  ||||| ||||||  ||||||||||||||||||||||||| ||||||||| ||| |||||||||| ||||||||||  |||| |    
T  8572882 gatttggtagatatcgtagttgcgtcgaatgattaaggaacgattgagggaatttttgaggtgaaggttggtgaagttgtgggaatcgattatagattta 8572783  T
Q  230 agtgattttgaggttgaacggaatcgga 257  Q
    ||||||||||| ||||| ||||||||||    
T  8572782 agtgattttgaagttgatcggaatcgga 8572755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 156 - 276
Target Start/End: Original strand, 10372676 - 10372796
Alignment:
Q  156 gaagaattaaggaacgattgagggaattttggaggtgaagtttgatgaagttgtgagaatcgattagggattgaagtgattttgaggttgaacggaatcg 255  Q
    |||| |||||||| |||||||||||||||||||||||||| |||||||| ||||| ||||||||||  |||| || ||||||||| ||||| ||||||||    
T  10372676 gaaggattaaggatcgattgagggaattttggaggtgaaggttgatgaatttgtgggaatcgattaatgatttaaatgattttgaagttgatcggaatcg 10372775  T
Q  256 gatgagggattgtaccggtaa 276  Q
    ||  || |||| |||||||||    
T  10372776 gagaagtgattttaccggtaa 10372796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 149 - 254
Target Start/End: Original strand, 9292715 - 9292820
Alignment:
Q  149 ttgtgtcgaagaattaaggaacgattgagggaattttggaggtgaagtttgatgaagttgtgagaatcgattagggattgaagtgattttgaggttgaac 248  Q
    ||||||||||| |||||||| || ||||||||||||| ||||||||| ||  ||||| ||||||||||||||||||||| ||||||||||||  |||| |    
T  9292715 ttgtgtcgaaggattaaggatcggttgagggaatttttgaggtgaaggttagtgaagctgtgagaatcgattagggatttaagtgattttgaaattgatc 9292814  T
Q  249 ggaatc 254  Q
    ||||||    
T  9292815 ggaatc 9292820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 161 - 276
Target Start/End: Original strand, 9321790 - 9321905
Alignment:
Q  161 attaaggaacgattgagggaattttggaggtgaagtttgatgaagttgtgagaatcgattagggattgaagtgattttgaggttgaacggaatcggatga 260  Q
    |||||||| ||| |||||||||||| ||| ||||| |||||||||| |||||||||||||| ||||| ||||||||| || ||||| |||||| |||  |    
T  9321790 attaaggatcgactgagggaatttttgagatgaaggttgatgaagtggtgagaatcgattatggatttaagtgatttagaagttgatcggaattggagaa 9321889  T
Q  261 gggattgtaccggtaa 276  Q
    | |||| |||||||||    
T  9321890 gtgattttaccggtaa 9321905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 156 - 257
Target Start/End: Original strand, 9316816 - 9316920
Alignment:
Q  156 gaagaattaaggaacgattgagggaatt---ttggaggtgaagtttgatgaagttgtgagaatcgattagggattgaagtgattttgaggttgaacggaa 252  Q
    |||| |||||||| ||||||||||||||   || ||||||||| |||||||||||||||||||| ||||  |||| |||||||||||| ||||| |||||    
T  9316816 gaaggattaaggatcgattgagggaattatttttgaggtgaaggttgatgaagttgtgagaatctattaaagatttaagtgattttgaagttgatcggaa 9316915  T
Q  253 tcgga 257  Q
    |||||    
T  9316916 tcgga 9316920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 173 - 257
Target Start/End: Complemental strand, 9283512 - 9283428
Alignment:
Q  173 ttgagggaattttggaggtgaagtttgatgaagttgtgagaatcgattagggattgaagtgattttgaggttgaacggaatcgga 257  Q
    ||||||||| ||| ||||||||| |||||||| ||||||||||| ||||||||| |||||||||| || ||||| ||||||||||    
T  9283512 ttgagggaacttttgaggtgaaggttgatgaatttgtgagaatctattagggatcgaagtgatttagaagttgatcggaatcgga 9283428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 154 - 254
Target Start/End: Original strand, 10353937 - 10354037
Alignment:
Q  154 tcgaagaattaaggaacgattgagggaattttggaggtgaagtttgatgaagttgtgagaatcgattagggattgaagtgattttgaggttgaacggaat 253  Q
    |||||||||||||||  ||||| ||||||||  ||||||||| |||||||| ||||  |||||||||||||||| || ||||||||| ||||| ||||||    
T  10353937 tcgaagaattaaggattgattgggggaatttctgaggtgaaggttgatgaatttgttggaatcgattagggatttaaatgattttgaagttgatcggaat 10354036  T
Q  254 c 254  Q
    |    
T  10354037 c 10354037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 276
Target Start/End: Original strand, 9329418 - 9329513
Alignment:
Q  181 attttggaggtgaagtttgatgaagttgtgagaatcgattagggattgaagtgattttgaggttgaacggaatcggatgagggattgtaccggtaa 276  Q
    ||||| ||||||||| ||  |||||||||| |||||||||| ||||| |||||||||||| ||||||||||||||||  || |||| |||||||||    
T  9329418 atttttgaggtgaaggttagtgaagttgtgggaatcgattatggatttaagtgattttgaagttgaacggaatcggagaagtgattttaccggtaa 9329513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 182 - 257
Target Start/End: Complemental strand, 12011922 - 12011847
Alignment:
Q  182 ttttggaggtgaagtttgatgaagttgtgagaatcgattagggattgaagtgattttgaggttgaacggaatcgga 257  Q
    |||| ||||||||| ||| ||||||||||||||||||||| ||||| |||||||||||| ||||| ||||||||||    
T  12011922 tttttgaggtgaagattggtgaagttgtgagaatcgattatggatttaagtgattttgaagttgagcggaatcgga 12011847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 179 - 276
Target Start/End: Original strand, 10348620 - 10348717
Alignment:
Q  179 gaattttggaggtgaagtttgatgaagttgtgagaatcgattagggattgaagtgattttgaggttgaacggaatcggatgagggattgtaccggtaa 276  Q
    |||||||  |||||||| |||||||| ||| | |||||||||| ||||| |||||||||||||||||| ||||||||||  || |||| |||||||||    
T  10348620 gaattttttaggtgaaggttgatgaatttgagggaatcgattaaggatttaagtgattttgaggttgatcggaatcggagaagtgattttaccggtaa 10348717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 201 - 276
Target Start/End: Complemental strand, 9060408 - 9060333
Alignment:
Q  201 tgaagttgtgagaatcgattagggattgaagtgattttgaggttgaacggaatcggatgagggattgtaccggtaa 276  Q
    ||||||||||||||||||||| ||||| |||||||||||| ||||| ||||||||||  || ||||| ||||||||    
T  9060408 tgaagttgtgagaatcgattaaggatttaagtgattttgaagttgatcggaatcggagaagtgattgaaccggtaa 9060333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 172 - 277
Target Start/End: Original strand, 9275333 - 9275438
Alignment:
Q  172 attgagggaattttggaggtgaagtttgatgaagttgtgagaatcgattagggattgaagtgattttgaggttgaacggaatcggatgagggattgtacc 271  Q
    |||||||||||||| ||| ||||| |||||||||||||| ||||| || |  |||| ||||||||||||| |||| ||||||| ||  || ||||||||     
T  9275333 attgagggaatttttgagatgaaggttgatgaagttgtgggaatcaatcaacgatttaagtgattttgagattgatcggaatcagagaagtgattgtact 9275432  T
Q  272 ggtaac 277  Q
    ||||||    
T  9275433 ggtaac 9275438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 181 - 246
Target Start/End: Original strand, 9357935 - 9358000
Alignment:
Q  181 attttggaggtgaagtttgatgaagttgtgagaatcgattagggattgaagtgattttgaggttga 246  Q
    ||||| ||||||||| || |||||||||||||||||||||| ||||| |||||||||||| |||||    
T  9357935 atttttgaggtgaaggtttatgaagttgtgagaatcgattaaggatttaagtgattttgaagttga 9358000  T

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Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 182 - 255
Target Start/End: Complemental strand, 12018243 - 12018170
Alignment:
Q  182 ttttggaggtgaagtttgatgaagttgtgagaatcgattagggattgaagtgattttgaggttgaacggaatcg 255  Q
    |||| ||| ||||| ||| ||||||||||||||||||||| ||||| |||||||||||| ||||| ||||||||    
T  12018243 tttttgagttgaagattggtgaagttgtgagaatcgattatggatttaagtgattttgaagttgagcggaatcg 12018170  T

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Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 9365434 - 9365490
Alignment:
Q  201 tgaagttgtgagaatcgattagggattgaagtgattttgaggttgaacggaatcgga 257  Q
    ||||| ||||||||||||||| ||||| |||||||||||||||||| ||||||||||    
T  9365434 tgaaggtgtgagaatcgattatggatttaagtgattttgaggttgatcggaatcgga 9365490  T

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Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 172 - 255
Target Start/End: Complemental strand, 7114984 - 7114901
Alignment:
Q  172 attgagggaattttggaggtgaagtttgatgaagttgtgagaatcgattagggattgaagtgattttgaggttgaacggaatcg 255  Q
    ||||| ||||||||  || ||||| |||||||| ||||| |||||||||| ||||| |||||||||||| ||||| ||||||||    
T  7114984 attgaaggaatttttaagatgaaggttgatgaatttgtgggaatcgattaaggatttaagtgattttgaagttgatcggaatcg 7114901  T

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Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 182 - 288
Target Start/End: Original strand, 7612716 - 7612822
Alignment:
Q  182 ttttggaggtgaagtttgatgaagttgtgagaatcgattagggattgaagtgattttgaggttgaacggaatcggatgagggattgtaccggtaacagag 281  Q
    |||| ||||||||| ||  |||||||||| ||||| |||| ||||| ||| ||||| ||  |||| |||||||||| ||||| ||||||||||||  |||    
T  7612716 tttttgaggtgaaggtttgtgaagttgtgggaatcaattaaggatttaagcgatttagaaattgatcggaatcggaggagggtttgtaccggtaagcgag 7612815  T
Q  282 agaggat 288  Q
    |||||||    
T  7612816 agaggat 7612822  T

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Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 171 - 257
Target Start/End: Complemental strand, 12005505 - 12005419
Alignment:
Q  171 gattgagggaattttggaggtgaagtttgatgaagttgtgagaatcgattagggattgaagtgattttgaggttgaacggaatcgga 257  Q
    ||||||| |||||||  || ||||| ||| ||||||||||||||||||||| ||||| ||| |||| ||| ||||| ||||||||||    
T  12005505 gattgagagaattttttagatgaaggttggtgaagttgtgagaatcgattatggatttaagcgattctgaagttgagcggaatcgga 12005419  T

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Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 257
Target Start/End: Complemental strand, 11986849 - 11986779
Alignment:
Q  187 gaggtgaagtttgatgaagttgtgagaatcgattagggattgaagtgattttgaggttgaacggaatcgga 257  Q
    ||||||||| ||| |||||||||||||||| |||| ||||| ||| |||| ||| ||||| ||||||||||    
T  11986849 gaggtgaagattggtgaagttgtgagaatcaattatggatttaagcgattctgaagttgagcggaatcgga 11986779  T

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Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 182 - 289
Target Start/End: Complemental strand, 8578854 - 8578747
Alignment:
Q  182 ttttggaggtgaagtttgatgaagttgtgagaatcgattagggattgaagtgattttgaggttgaacggaatcggatgagggattgtaccggtaacagag 281  Q
    |||| ||||| | ||||| ||||| |||| ||||| || | |||| |||||||||| ||  |||| ||||||||||  |||||||||||||||||  | |    
T  8578854 tttttgaggtaatgtttggtgaaggtgtgggaatctatgaaggatcgaagtgatttagaaattgatcggaatcggagaagggattgtaccggtaagcggg 8578755  T
Q  282 agaggata 289  Q
    ||||||||    
T  8578754 agaggata 8578747  T

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Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 189 - 288
Target Start/End: Complemental strand, 17565436 - 17565337
Alignment:
Q  189 ggtgaagtttgatgaagttgtgagaatcgattagggattgaagtgattttgaggttgaacggaatcggatgagggattgtaccggtaacagagagaggat 288  Q
    ||||||| ||| ||||||| || ||||| ||||   ||| ||||||||| || ||||| |||| ||||| |||||||||||| |||||  ||||||||||    
T  17565436 ggtgaaggttggtgaagttatgggaatcaattaaaaatttaagtgatttcgacgttgatcggagtcggaggagggattgtactggtaagcgagagaggat 17565337  T

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Target: chr8 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 106 - 257
Target Start/End: Complemental strand, 41966130 - 41965976
Alignment:
Q  106 ggtggttaggttagagaaatcgtt---gatttggtagaaaacagagttgtgtcgaagaattaaggaacgattgagggaattttggaggtgaagtttgatg 202  Q
    ||||||||||||||||||||| |    ||  ||||||| | ||| |||| ||||||| |||||||| ||||||||||| |||  ||||||||| ||||||    
T  41966130 ggtggttaggttagagaaatcctcatcgaactggtagagatcagtgttgagtcgaaggattaaggatcgattgagggattttctgaggtgaaggttgatg 41966031  T
Q  203 aagttgtgagaatcgattagggattgaagtgattttgaggttgaacggaatcgga 257  Q
    |||||||| |||||||||| |||| |||||||||| |||||||| ||||||||||    
T  41966030 aagttgtgggaatcgattaaggatcgaagtgatttcgaggttgatcggaatcgga 41965976  T

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Target: scaffold0667 (Bit Score: 64; Significance: 7e-28; HSPs: 1)
Name: scaffold0667
Description:

Target: scaffold0667; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 153 - 276
Target Start/End: Original strand, 5250 - 5373
Alignment:
Q  153 gtcgaagaattaaggaacgattgagggaattttggaggtgaagtttgatgaagttgtgagaatcgattagggattgaagtgattttgaggttgaacggaa 252  Q
    ||||||| || ||||| | |||||||||||||| | ||||||| ||||||||||||||||||||||||| ||||| |||||||||||| ||||| |||||    
T  5250 gtcgaaggatgaaggatctattgagggaatttttgcggtgaaggttgatgaagttgtgagaatcgattatggatttaagtgattttgaagttgatcggaa 5349  T
Q  253 tcggatgagggattgtaccggtaa 276  Q
    |||||  || |||| |||||||||    
T  5350 tcggagaagtgattttaccggtaa 5373  T

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Target: chr3 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 133 - 313
Target Start/End: Original strand, 37463293 - 37463473
Alignment:
Q  133 ttggtagaaaacagagttgtgtcgaagaattaaggaacgattgagggaattttggaggtgaagtttgatgaagttgtgagaatcgattagggattgaagt 232  Q
    |||||||| | | ||||||| |||||  |||| |||  ||||||||| ||||| ||| ||||| |||||||||||||||||||||||||  |||| ||||    
T  37463293 ttggtagatatcggagttgtttcgaatgattacggattgattgaggggatttttgagatgaaggttgatgaagttgtgagaatcgattaaagatttaagt 37463392  T
Q  233 gattttgaggttgaacggaatcggatgagggattgtaccggtaacagagagaggataccggtgagtatctcaggcggaaga 313  Q
    |||||||| ||||| ||||||||||  || |||| ||| |||||  | ||||||||  ||| |||||| || |||||||||    
T  37463393 gattttgaagttgatcggaatcggagaagtgattctactggtaaacgggagaggatttcggcgagtatttccggcggaaga 37463473  T

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Target: chr4 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 154 - 257
Target Start/End: Original strand, 26575671 - 26575774
Alignment:
Q  154 tcgaagaattaaggaacgattgagggaattttggaggtgaagtttgatgaagttgtgagaatcgattagggattgaagtgattttgaggttgaacggaat 253  Q
    |||||| |||||||| |||||| ||||||||  ||||||||| |||||||| ||||  |||||||||| | ||| |||||||||||| ||||| ||||||    
T  26575671 tcgaaggattaaggatcgattgggggaatttctgaggtgaaggttgatgaatttgtaggaatcgattaagaatttaagtgattttgaagttgatcggaat 26575770  T
Q  254 cgga 257  Q
    ||||    
T  26575771 cgga 26575774  T

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Target: chr5 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 187 - 267
Target Start/End: Original strand, 36225575 - 36225655
Alignment:
Q  187 gaggtgaagtttgatgaagttgtgagaatcgattagggattgaagtgattttgaggttgaacggaatcggatgagggattg 267  Q
    ||||||||| ||  |||||||||| ||||||||||  |||| |||||||||||| ||||| |||||||||| |||||||||    
T  36225575 gaggtgaagattagtgaagttgtgcgaatcgattaacgatttaagtgattttgaagttgatcggaatcggaggagggattg 36225655  T

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