View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8553_low_1 (Length: 676)

Name: NF8553_low_1
Description: NF8553
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8553_low_1
NF8553_low_1
[»] chr3 (86 HSPs)
chr3 (234-659)||(42198950-42199379)
chr3 (463-659)||(42211521-42211717)
chr3 (463-659)||(42223737-42223933)
chr3 (59-151)||(42199436-42199528)
chr3 (104-151)||(4322039-4322086)
chr3 (104-151)||(36732822-36732869)
chr3 (104-151)||(38232346-38232393)
chr3 (104-151)||(46724624-46724671)
chr3 (104-151)||(47005369-47005416)
chr3 (220-254)||(48924207-48924241)
chr3 (217-254)||(1721416-1721453)
chr3 (217-254)||(14772210-14772247)
chr3 (217-254)||(47336227-47336264)
chr3 (104-149)||(53113598-53113643)
chr3 (217-253)||(15979338-15979374)
chr3 (222-254)||(20644845-20644877)
chr3 (217-253)||(26089730-26089766)
chr3 (217-253)||(45313827-45313863)
chr3 (103-151)||(50009134-50009182)
chr3 (104-151)||(1721302-1721349)
chr3 (220-263)||(22008857-22008900)
chr3 (104-151)||(25609847-25609894)
chr3 (108-151)||(54767389-54767432)
chr3 (217-251)||(2486866-2486900)
chr3 (220-254)||(9262122-9262156)
chr3 (220-254)||(9603886-9603920)
chr3 (220-254)||(19844548-19844582)
chr3 (217-263)||(20611010-20611056)
chr3 (104-142)||(20644720-20644758)
chr3 (220-254)||(21553888-21553922)
chr3 (220-254)||(25615974-25616008)
chr3 (220-254)||(26799887-26799921)
chr3 (105-151)||(27681533-27681579)
chr3 (220-254)||(28552020-28552054)
chr3 (220-254)||(28552350-28552384)
chr3 (104-138)||(29490494-29490528)
chr3 (220-254)||(31480135-31480169)
chr3 (220-254)||(45002020-45002054)
chr3 (220-254)||(51550081-51550115)
chr3 (220-254)||(52342194-52342228)
chr3 (104-138)||(53113648-53113682)
chr3 (220-254)||(54608517-54608551)
chr3 (221-254)||(474043-474076)
chr3 (221-254)||(474376-474409)
chr3 (221-254)||(3417819-3417852)
chr3 (220-253)||(4035020-4035053)
chr3 (217-254)||(5345653-5345690)
chr3 (217-254)||(9597059-9597096)
chr3 (221-254)||(12740906-12740939)
chr3 (221-254)||(12741239-12741272)
chr3 (220-253)||(16123139-16123172)
chr3 (104-133)||(19297803-19297832)
chr3 (104-133)||(19297839-19297868)
chr3 (217-254)||(28452340-28452377)
chr3 (221-254)||(29490711-29490744)
chr3 (108-149)||(29678127-29678168)
chr3 (221-254)||(39132874-39132907)
chr3 (220-265)||(39288865-39288910)
chr3 (217-254)||(40277821-40277858)
chr3 (104-133)||(40278037-40278066)
chr3 (220-253)||(40370556-40370589)
chr3 (221-254)||(40545563-40545596)
chr3 (221-254)||(47005153-47005186)
chr3 (221-254)||(47336549-47336582)
chr3 (220-253)||(49323782-49323815)
chr3 (221-250)||(49324114-49324143)
chr3 (221-254)||(51550414-51550447)
chr3 (217-254)||(51834906-51834943)
chr3 (221-254)||(53113442-53113475)
chr3 (221-254)||(54608831-54608864)
chr3 (217-253)||(275797-275833)
chr3 (220-260)||(3152078-3152118)
chr3 (221-253)||(4034717-4034749)
chr3 (222-254)||(20405192-20405224)
chr3 (220-252)||(25610097-25610129)
chr3 (103-151)||(25710589-25710637)
chr3 (221-253)||(26090046-26090078)
chr3 (222-250)||(27499059-27499087)
chr3 (222-254)||(30106189-30106221)
chr3 (105-133)||(35533488-35533516)
chr3 (105-133)||(39132663-39132691)
chr3 (222-254)||(39820632-39820664)
chr3 (221-253)||(43441270-43441302)
chr3 (222-254)||(47005488-47005520)
chr3 (222-254)||(47433837-47433869)
chr3 (103-151)||(52342274-52342322)
[»] scaffold0160 (2 HSPs)
scaffold0160 (104-148)||(27214-27258)
scaffold0160 (221-260)||(27332-27371)
[»] chr6 (43 HSPs)
chr6 (103-151)||(30037938-30037986)
chr6 (104-151)||(19267668-19267715)
chr6 (217-253)||(19267565-19267601)
chr6 (104-151)||(19690610-19690657)
chr6 (104-151)||(23628900-23628947)
chr6 (217-254)||(1007123-1007160)
chr6 (221-254)||(3414720-3414753)
chr6 (221-254)||(30479062-30479095)
chr6 (220-260)||(6412546-6412586)
chr6 (104-151)||(8169891-8169938)
chr6 (104-151)||(12419810-12419857)
chr6 (220-259)||(13268103-13268142)
chr6 (108-151)||(30479276-30479319)
chr6 (220-255)||(33808618-33808653)
chr6 (220-254)||(1007476-1007510)
chr6 (220-254)||(3414386-3414420)
chr6 (220-254)||(3968976-3969010)
chr6 (220-254)||(12299107-12299141)
chr6 (220-254)||(19321098-19321132)
chr6 (220-254)||(20467685-20467719)
chr6 (220-254)||(21147403-21147437)
chr6 (220-254)||(21385551-21385585)
chr6 (220-254)||(21994370-21994404)
chr6 (220-254)||(22543353-22543387)
chr6 (221-259)||(22543686-22543724)
chr6 (220-254)||(23502236-23502270)
chr6 (220-254)||(25137324-25137358)
chr6 (221-254)||(3276322-3276355)
chr6 (221-254)||(3968644-3968677)
chr6 (221-254)||(6412217-6412250)
chr6 (221-254)||(8170119-8170152)
chr6 (221-254)||(10910932-10910965)
chr6 (221-254)||(12757609-12757642)
chr6 (217-254)||(14655378-14655415)
chr6 (221-254)||(17765008-17765041)
chr6 (221-254)||(18024343-18024376)
chr6 (221-254)||(19267880-19267913)
chr6 (221-254)||(19690392-19690425)
chr6 (221-254)||(21385250-21385283)
chr6 (218-254)||(6468309-6468345)
chr6 (217-253)||(17771911-17771947)
chr6 (221-253)||(24901239-24901271)
chr6 (221-253)||(31198615-31198647)
[»] chr8 (75 HSPs)
chr8 (104-151)||(23939762-23939809)
chr8 (104-151)||(13155101-13155148)
chr8 (104-151)||(13779274-13779321)
chr8 (104-151)||(30969497-30969544)
chr8 (108-151)||(33652293-33652336)
chr8 (254-352)||(37767485-37767586)
chr8 (220-254)||(25702511-25702545)
chr8 (217-254)||(9496687-9496724)
chr8 (217-254)||(10540746-10540783)
chr8 (106-151)||(17073907-17073951)
chr8 (106-151)||(17574319-17574363)
chr8 (220-260)||(28346387-28346427)
chr8 (220-264)||(28346725-28346769)
chr8 (217-253)||(37536383-37536419)
chr8 (221-260)||(3512234-3512273)
chr8 (104-151)||(3680631-3680678)
chr8 (104-151)||(6146697-6146744)
chr8 (221-260)||(11019513-11019552)
chr8 (104-151)||(14848040-14848087)
chr8 (104-139)||(24090334-24090369)
chr8 (104-151)||(28497469-28497516)
chr8 (104-151)||(33652271-33652318)
chr8 (217-251)||(2811437-2811471)
chr8 (220-254)||(4710187-4710221)
chr8 (220-250)||(9175338-9175368)
chr8 (220-254)||(10337416-10337450)
chr8 (220-254)||(11019824-11019858)
chr8 (220-254)||(11976372-11976406)
chr8 (103-133)||(13796450-13796480)
chr8 (220-262)||(16643652-16643694)
chr8 (220-254)||(20277691-20277725)
chr8 (220-254)||(21064318-21064352)
chr8 (220-254)||(27117943-27117977)
chr8 (220-254)||(32726238-32726272)
chr8 (220-254)||(34963299-34963333)
chr8 (220-254)||(37536085-37536119)
chr8 (220-253)||(2728564-2728597)
chr8 (217-254)||(4375974-4376011)
chr8 (220-253)||(7326388-7326421)
chr8 (221-254)||(7420229-7420262)
chr8 (221-254)||(8298943-8298976)
chr8 (221-254)||(9496340-9496373)
chr8 (221-254)||(10337118-10337151)
chr8 (220-253)||(13232529-13232562)
chr8 (221-254)||(17073806-17073839)
chr8 (221-254)||(17574431-17574464)
chr8 (217-254)||(18549200-18549237)
chr8 (221-254)||(20984145-20984178)
chr8 (221-254)||(25600229-25600262)
chr8 (221-254)||(25702777-25702810)
chr8 (220-253)||(30969684-30969717)
chr8 (221-254)||(32725906-32725939)
chr8 (217-254)||(33636321-33636358)
chr8 (221-254)||(35097327-35097360)
chr8 (220-253)||(35097659-35097692)
chr8 (221-254)||(35346966-35346999)
chr8 (221-254)||(38930301-38930334)
chr8 (217-253)||(1162909-1162945)
chr8 (221-253)||(1778564-1778596)
chr8 (221-253)||(3031570-3031602)
chr8 (221-253)||(7185972-7186004)
chr8 (221-253)||(8298587-8298619)
chr8 (104-132)||(9175129-9175157)
chr8 (221-253)||(14489041-14489073)
chr8 (220-252)||(24090455-24090487)
chr8 (103-151)||(32195516-32195564)
chr8 (217-253)||(33526052-33526088)
chr8 (221-253)||(34963632-34963664)
chr8 (221-253)||(35346629-35346661)
chr8 (104-132)||(36044518-36044546)
chr8 (217-253)||(40844156-40844192)
chr8 (221-253)||(42132864-42132896)
chr8 (221-253)||(42133122-42133154)
chr8 (107-151)||(42429858-42429902)
chr8 (221-253)||(42430088-42430120)
[»] chr7 (55 HSPs)
chr7 (104-151)||(2945583-2945630)
chr7 (104-151)||(6892131-6892178)
chr7 (104-147)||(22540035-22540078)
chr7 (104-151)||(28262794-28262841)
chr7 (220-254)||(5354767-5354801)
chr7 (287-349)||(11669615-11669677)
chr7 (104-142)||(19005716-19005754)
chr7 (220-254)||(39438740-39438774)
chr7 (217-254)||(5233807-5233844)
chr7 (217-254)||(11767239-11767276)
chr7 (106-151)||(44841572-44841617)
chr7 (220-260)||(38486757-38486797)
chr7 (220-259)||(3975805-3975844)
chr7 (221-260)||(46828937-46828976)
chr7 (220-254)||(1614871-1614905)
chr7 (220-254)||(3975548-3975582)
chr7 (217-251)||(6847083-6847117)
chr7 (220-254)||(8144625-8144659)
chr7 (220-254)||(9659656-9659690)
chr7 (220-254)||(23399611-23399645)
chr7 (220-254)||(23676419-23676453)
chr7 (220-254)||(25092515-25092549)
chr7 (220-254)||(25988716-25988750)
chr7 (220-254)||(26878038-26878072)
chr7 (220-254)||(28262712-28262746)
chr7 (220-254)||(29198629-29198663)
chr7 (220-254)||(41053841-41053875)
chr7 (220-254)||(41054203-41054237)
chr7 (220-254)||(45228885-45228919)
chr7 (220-254)||(48192455-48192489)
chr7 (220-254)||(48852443-48852477)
chr7 (221-254)||(1614558-1614591)
chr7 (220-253)||(6589021-6589054)
chr7 (221-254)||(8144294-8144327)
chr7 (221-254)||(14543709-14543742)
chr7 (217-254)||(14738968-14739005)
chr7 (220-253)||(16853556-16853589)
chr7 (220-261)||(20388266-20388307)
chr7 (221-254)||(23399944-23399977)
chr7 (104-133)||(24717383-24717412)
chr7 (221-254)||(25092159-25092192)
chr7 (221-254)||(25988384-25988417)
chr7 (220-253)||(27037593-27037626)
chr7 (221-254)||(27458398-27458431)
chr7 (221-250)||(34877777-34877806)
chr7 (221-254)||(35837923-35837956)
chr7 (221-254)||(35838305-35838338)
chr7 (221-254)||(38486477-38486510)
chr7 (221-254)||(42254957-42254990)
chr7 (221-254)||(46759657-46759690)
chr7 (221-253)||(19005598-19005630)
chr7 (221-253)||(28528905-28528937)
chr7 (222-254)||(29198302-29198334)
chr7 (222-254)||(44568325-44568357)
chr7 (104-151)||(46829047-46829095)
[»] chr5 (53 HSPs)
chr5 (104-151)||(5103727-5103774)
chr5 (106-151)||(42596670-42596715)
chr5 (104-148)||(1286788-1286832)
chr5 (107-151)||(42553861-42553905)
chr5 (217-254)||(35876687-35876724)
chr5 (104-151)||(5103749-5103796)
chr5 (108-151)||(5904111-5904154)
chr5 (220-259)||(5917427-5917466)
chr5 (104-151)||(35609487-35609534)
chr5 (220-254)||(1104857-1104891)
chr5 (220-254)||(1105115-1105149)
chr5 (220-254)||(1381578-1381612)
chr5 (220-254)||(12144906-12144940)
chr5 (220-254)||(19565798-19565832)
chr5 (220-254)||(19685347-19685381)
chr5 (220-254)||(20660947-20660981)
chr5 (220-254)||(20986056-20986090)
chr5 (220-254)||(24443379-24443413)
chr5 (220-254)||(24443711-24443745)
chr5 (220-254)||(28213372-28213406)
chr5 (221-263)||(31037709-31037751)
chr5 (221-259)||(32108802-32108840)
chr5 (220-254)||(34125599-34125633)
chr5 (220-254)||(35928063-35928097)
chr5 (220-254)||(38170513-38170547)
chr5 (220-254)||(40764414-40764448)
chr5 (221-250)||(1287013-1287042)
chr5 (221-254)||(1381246-1381279)
chr5 (221-254)||(4736510-4736543)
chr5 (221-254)||(5917125-5917158)
chr5 (220-253)||(6912497-6912530)
chr5 (221-254)||(17070534-17070567)
chr5 (221-254)||(18258161-18258194)
chr5 (221-254)||(18258495-18258528)
chr5 (221-254)||(19565466-19565499)
chr5 (221-254)||(19685016-19685049)
chr5 (221-254)||(20690732-20690765)
chr5 (104-133)||(20690947-20690976)
chr5 (217-254)||(25779126-25779163)
chr5 (221-254)||(35877020-35877053)
chr5 (221-254)||(37271674-37271707)
chr5 (217-254)||(38786158-38786195)
chr5 (217-254)||(39379574-39379611)
chr5 (221-254)||(40029140-40029173)
chr5 (221-253)||(45138-45170)
chr5 (220-252)||(2636960-2636992)
chr5 (217-253)||(20661275-20661311)
chr5 (221-253)||(30888160-30888192)
chr5 (105-133)||(32888896-32888924)
chr5 (221-253)||(35928426-35928458)
chr5 (221-253)||(36973678-36973710)
chr5 (221-253)||(38962806-38962838)
chr5 (220-264)||(40764747-40764791)
[»] chr4 (64 HSPs)
chr4 (104-151)||(54903214-54903261)
chr4 (104-141)||(14594315-14594352)
chr4 (104-151)||(12791712-12791759)
chr4 (104-151)||(50754025-50754072)
chr4 (220-253)||(8905201-8905234)
chr4 (221-254)||(13764775-13764808)
chr4 (108-151)||(8904973-8905016)
chr4 (104-151)||(23779097-23779144)
chr4 (219-254)||(35119291-35119326)
chr4 (104-151)||(44925587-44925634)
chr4 (217-260)||(45474560-45474603)
chr4 (220-254)||(4211560-4211594)
chr4 (103-133)||(5827868-5827898)
chr4 (220-254)||(13530680-13530714)
chr4 (220-254)||(14487801-14487835)
chr4 (221-259)||(14488155-14488193)
chr4 (220-254)||(24774044-24774078)
chr4 (220-254)||(29499181-29499215)
chr4 (220-254)||(30046759-30046793)
chr4 (220-254)||(30061100-30061134)
chr4 (220-254)||(35415298-35415332)
chr4 (220-254)||(41620223-41620257)
chr4 (220-254)||(43231356-43231390)
chr4 (220-254)||(53915682-53915716)
chr4 (105-151)||(54208543-54208589)
chr4 (220-254)||(54903442-54903476)
chr4 (221-254)||(5827941-5827974)
chr4 (221-254)||(11693089-11693122)
chr4 (221-254)||(12152153-12152186)
chr4 (221-254)||(12152461-12152494)
chr4 (221-254)||(13631227-13631260)
chr4 (221-254)||(13631567-13631600)
chr4 (221-254)||(14594205-14594238)
chr4 (106-139)||(14791616-14791649)
chr4 (221-254)||(14791774-14791807)
chr4 (104-133)||(19903476-19903505)
chr4 (220-253)||(23245231-23245264)
chr4 (221-254)||(25423923-25423956)
chr4 (221-254)||(25424280-25424313)
chr4 (221-254)||(29420505-29420538)
chr4 (217-254)||(31560330-31560367)
chr4 (221-254)||(35464017-35464050)
chr4 (220-253)||(35464349-35464382)
chr4 (220-253)||(42848358-42848391)
chr4 (221-254)||(43231087-43231120)
chr4 (220-253)||(46115414-46115447)
chr4 (220-253)||(46128548-46128581)
chr4 (220-253)||(46292392-46292425)
chr4 (104-133)||(51738258-51738287)
chr4 (221-254)||(53916015-53916048)
chr4 (217-254)||(55072388-55072425)
chr4 (221-253)||(5827655-5827687)
chr4 (221-253)||(13073759-13073791)
chr4 (104-132)||(13073975-13074003)
chr4 (222-254)||(13074094-13074126)
chr4 (221-253)||(13764613-13764645)
chr4 (221-253)||(19321827-19321859)
chr4 (221-261)||(22099880-22099920)
chr4 (221-253)||(25358508-25358540)
chr4 (221-253)||(26412552-26412584)
chr4 (305-349)||(27433007-27433051)
chr4 (221-253)||(31560663-31560695)
chr4 (221-253)||(42824059-42824091)
chr4 (221-253)||(53308036-53308068)
[»] chr2 (49 HSPs)
chr2 (104-151)||(29832004-29832051)
chr2 (104-151)||(34963900-34963947)
chr2 (104-149)||(1138198-1138243)
chr2 (104-151)||(3172381-3172428)
chr2 (104-151)||(5164051-5164098)
chr2 (104-151)||(13215163-13215210)
chr2 (104-151)||(37228894-37228941)
chr2 (217-254)||(14003408-14003445)
chr2 (217-254)||(30215421-30215458)
chr2 (217-254)||(37911084-37911121)
chr2 (217-254)||(43671933-43671970)
chr2 (221-264)||(4424153-4424196)
chr2 (220-254)||(2481524-2481558)
chr2 (220-254)||(4423894-4423928)
chr2 (220-254)||(14003709-14003743)
chr2 (220-254)||(15842790-15842824)
chr2 (220-254)||(16522990-16523024)
chr2 (220-254)||(16523292-16523326)
chr2 (220-254)||(16673738-16673772)
chr2 (220-254)||(18113088-18113122)
chr2 (220-254)||(24358615-24358649)
chr2 (220-254)||(25705416-25705450)
chr2 (220-254)||(29859839-29859873)
chr2 (220-254)||(31909445-31909479)
chr2 (106-151)||(1295285-1295330)
chr2 (220-253)||(5334751-5334784)
chr2 (220-253)||(5335007-5335040)
chr2 (221-254)||(13215059-13215092)
chr2 (221-254)||(16673410-16673443)
chr2 (221-254)||(20131316-20131349)
chr2 (220-253)||(20131648-20131681)
chr2 (221-254)||(25705084-25705117)
chr2 (221-254)||(31644840-31644873)
chr2 (221-254)||(33576085-33576118)
chr2 (221-254)||(35155587-35155620)
chr2 (217-250)||(35686302-35686335)
chr2 (221-254)||(37228732-37228765)
chr2 (220-253)||(40124966-40124999)
chr2 (221-254)||(41451836-41451869)
chr2 (221-254)||(44559061-44559094)
chr2 (221-253)||(146658-146690)
chr2 (222-254)||(10671629-10671661)
chr2 (217-253)||(18113418-18113454)
chr2 (221-253)||(19604946-19604978)
chr2 (222-254)||(30215840-30215872)
chr2 (221-253)||(34964127-34964159)
chr2 (218-254)||(39367725-39367761)
chr2 (217-253)||(41791276-41791312)
chr2 (221-253)||(42695868-42695900)
[»] chr1 (69 HSPs)
chr1 (104-151)||(19198687-19198734)
chr1 (104-151)||(39025233-39025280)
chr1 (104-151)||(24510157-24510204)
chr1 (104-151)||(34002791-34002838)
chr1 (104-151)||(49073794-49073841)
chr1 (221-254)||(15211510-15211543)
chr1 (217-254)||(49074017-49074054)
chr1 (220-260)||(31258332-31258372)
chr1 (218-254)||(42483236-42483272)
chr1 (217-253)||(45638580-45638616)
chr1 (104-151)||(12322820-12322867)
chr1 (104-151)||(12360818-12360865)
chr1 (104-151)||(12360840-12360887)
chr1 (220-267)||(16060852-16060899)
chr1 (104-151)||(32035530-32035577)
chr1 (104-151)||(33234762-33234809)
chr1 (220-254)||(3753539-3753573)
chr1 (104-138)||(8364697-8364731)
chr1 (220-254)||(12360602-12360636)
chr1 (220-254)||(15516581-15516615)
chr1 (220-254)||(16026905-16026939)
chr1 (220-254)||(24507810-24507844)
chr1 (220-254)||(33045657-33045691)
chr1 (220-254)||(33234545-33234579)
chr1 (220-254)||(38164262-38164296)
chr1 (221-259)||(45380266-45380304)
chr1 (217-251)||(46183686-46183720)
chr1 (220-254)||(47819231-47819265)
chr1 (220-254)||(47819563-47819597)
chr1 (221-254)||(3247197-3247230)
chr1 (221-254)||(7867325-7867358)
chr1 (221-254)||(8140433-8140466)
chr1 (221-254)||(10631496-10631529)
chr1 (221-254)||(10887232-10887265)
chr1 (221-254)||(10887566-10887599)
chr1 (221-254)||(12360936-12360969)
chr1 (104-133)||(15211615-15211644)
chr1 (221-254)||(15526330-15526363)
chr1 (220-257)||(18302354-18302391)
chr1 (221-254)||(19720711-19720744)
chr1 (221-254)||(24611144-24611177)
chr1 (220-253)||(24653802-24653835)
chr1 (221-254)||(24654135-24654168)
chr1 (106-151)||(29688152-29688197)
chr1 (221-254)||(30322928-30322961)
chr1 (221-254)||(32035756-32035789)
chr1 (220-253)||(33000305-33000338)
chr1 (221-254)||(33000637-33000670)
chr1 (222-259)||(35722313-35722350)
chr1 (221-254)||(36912852-36912885)
chr1 (220-253)||(38151179-38151212)
chr1 (221-254)||(39747803-39747836)
chr1 (220-253)||(40718441-40718474)
chr1 (220-253)||(41738796-41738829)
chr1 (221-254)||(42482978-42483011)
chr1 (221-254)||(45638862-45638895)
chr1 (221-254)||(48588988-48589021)
chr1 (221-254)||(48594075-48594108)
chr1 (221-254)||(48598686-48598719)
chr1 (105-133)||(4789524-4789552)
chr1 (221-253)||(10631164-10631196)
chr1 (221-253)||(12322938-12322970)
chr1 (221-253)||(24510276-24510308)
chr1 (221-253)||(24977778-24977810)
chr1 (217-253)||(26191359-26191395)
chr1 (221-253)||(31060787-31060819)
chr1 (221-253)||(35056530-35056562)
chr1 (221-253)||(40718110-40718142)
chr1 (220-252)||(44157696-44157728)
[»] scaffold0005 (4 HSPs)
scaffold0005 (104-141)||(223026-223063)
scaffold0005 (106-147)||(48082-48123)
scaffold0005 (221-254)||(47924-47957)
scaffold0005 (221-254)||(223140-223173)
[»] scaffold0078 (1 HSPs)
scaffold0078 (218-254)||(3751-3787)
[»] scaffold0024 (1 HSPs)
scaffold0024 (220-260)||(75731-75771)
[»] scaffold0085 (1 HSPs)
scaffold0085 (104-147)||(34802-34845)
[»] scaffold0684 (1 HSPs)
scaffold0684 (220-254)||(2627-2661)
[»] scaffold0026 (1 HSPs)
scaffold0026 (220-254)||(82673-82707)
[»] scaffold0007 (3 HSPs)
scaffold0007 (217-254)||(2500-2537)
scaffold0007 (105-133)||(2718-2746)
scaffold0007 (221-253)||(2851-2883)
[»] scaffold0106 (1 HSPs)
scaffold0106 (222-254)||(30935-30967)
[»] scaffold0008 (1 HSPs)
scaffold0008 (217-253)||(44170-44206)
[»] scaffold0001 (1 HSPs)
scaffold0001 (221-253)||(148250-148282)


Alignment Details
Target: chr3 (Bit Score: 387; Significance: 0; HSPs: 86)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 387; E-Value: 0
Query Start/End: Original strand, 234 - 659
Target Start/End: Complemental strand, 42199379 - 42198950
Alignment:
Q  234 accaaaaccatattttagcctcaatttaataacaaaataattgagt---atgtctagttaaaaattggagaggatgtttgtgttgtttaagaaaacctta 330  Q
    ||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42199379 accaaaaccatattttagcctcaatttaataacaaaataattgagtttaatgtctagttaaaaattggagaggatgtttgtgttgtttaagaaaacctta 42199280  T
Q  331 tcagaggttagtgtaatttacctttataaaactaatcctactggactattatggagttatttggataagnnnnnnn-gaagaaaaacaaacagtttttcg 429  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||    
T  42199279 tcagaggttagtgtaatttacctttataaaactaatcctactggactattatggagttatttggataagaaaaaagagaagaaaaacaaacagtttttcg 42199180  T
Q  430 attcactatggttataatgatataaaaaggttacaacaacttgaaaaacctcactcatttgactcttggttataactatctcacttccaccacatcattg 529  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42199179 attcactatggttataatgatataaaaaggttacaacaacttgaaaaacctcactcatttgactcttggttataactatctcacttccaccacatcattg 42199080  T
Q  530 aattttcagttctttgattcccttaaaaactcaactcagttgcaagttcttatggtcaattataacaacttgactggggaacttccaaattctgttgaat 629  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42199079 aattttcagttctttgattcccttaaaaactcaactcagttgcaagttcttatggtcaattataacaacttgactggggaacttccaaattctgttgaat 42198980  T
Q  630 atctgtgaggcaatctacaacagttctgtg 659  Q
    ||||||||||||||||||||||||||||||    
T  42198979 atctgtgaggcaatctacaacagttctgtg 42198950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 463 - 659
Target Start/End: Complemental strand, 42211717 - 42211521
Alignment:
Q  463 caacaacttgaaaaacctcactcatttgactcttggttataactatctcacttccaccacatcattgaattttcagttctttgattcccttaaaaactca 562  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||| ||||||  |||||||    
T  42211717 caacaacttgaaaaacctcactcatttgactcttggtaaaaactatctcacttccaacacatcattgaattttcagttctttgaatcccttcgaaactca 42211618  T
Q  563 actcagttgcaagttcttatggtcaattataacaacttgactggggaacttccaaattctgttgaatatctgtgaggcaatctacaacagttctgtg 659  Q
    |||||||||||  |||||||| ||||| ||||||||||||| ||||||||||||| ||| ||||| ||||| | | |||||||||||||||| ||||    
T  42211617 actcagttgcagattcttatgatcaatgataacaacttgaccggggaacttccaagttcggttgattatctttcaagcaatctacaacagttttgtg 42211521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 463 - 659
Target Start/End: Complemental strand, 42223933 - 42223737
Alignment:
Q  463 caacaacttgaaaaacctcactcatttgactcttggttataactatctcacttccaccacatcattgaattttcagttctttgattcccttaaaaactca 562  Q
    ||||||||||||||||||||||||||||  |||  || | ||  ||||||||||||| |||||||||||||||||||||||||||||||||  |||||||    
T  42223933 caacaacttgaaaaacctcactcatttgtatctcagtaagaataatctcacttccactacatcattgaattttcagttctttgattcccttcgaaactca 42223834  T
Q  563 actcagttgcaagttcttatggtcaattataacaacttgactggggaacttccaaattctgttgaatatctgtgaggcaatctacaacagttctgtg 659  Q
    |||||||| ||| |||||||||||||| ||||||||||||| ||||||||||||| ||| ||||| ||||| | | |||||||||||||||| ||||    
T  42223833 actcagttacaaattcttatggtcaatgataacaacttgaccggggaacttccaagttcggttgattatctttcaagcaatctacaacagttttgtg 42223737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 59 - 151
Target Start/End: Complemental strand, 42199528 - 42199436
Alignment:
Q  59 catagaatgaaaaacagtattggccacagttcgaagaaaacagctcctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 151  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  42199528 catagaatgaaaaacagtattggccacagttcgaagaaaacagctcctgcaaaatattttacttttgaaaatagtccctggaggtactatttt 42199436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 104 - 151
Target Start/End: Original strand, 4322039 - 4322086
Alignment:
Q  104 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 151  Q
    ||||||||||||||||||||| |||||||| |||||||| ||||||||    
T  4322039 cctgcaaaatattttacttttaaaaatagtccctggagggactatttt 4322086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 104 - 151
Target Start/End: Original strand, 36732822 - 36732869
Alignment:
Q  104 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 151  Q
    ||||||||||||||||||||||||||||||  ||||||| ||||||||    
T  36732822 cctgcaaaatattttacttttgaaaatagtatctggagggactatttt 36732869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 104 - 151
Target Start/End: Complemental strand, 38232393 - 38232346
Alignment:
Q  104 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 151  Q
    |||||||||||||||||||||||||||||| |||||||  ||||||||    
T  38232393 cctgcaaaatattttacttttgaaaatagtccctggagagactatttt 38232346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 104 - 151
Target Start/End: Original strand, 46724624 - 46724671
Alignment:
Q  104 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 151  Q
    |||||||||||||||| ||||||||||||||| |||||| ||||||||    
T  46724624 cctgcaaaatattttatttttgaaaatagttcatggagggactatttt 46724671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 104 - 151
Target Start/End: Original strand, 47005369 - 47005416
Alignment:
Q  104 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 151  Q
    |||||||||||||||||||||||||||||| ||||||||  |||||||    
T  47005369 cctgcaaaatattttacttttgaaaatagtccctggaggggctatttt 47005416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 220 - 254
Target Start/End: Original strand, 48924207 - 48924241
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||||||||||||||||||||||||||||||    
T  48924207 gcatatttacagggaccaaaaccatattttagcct 48924241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 217 - 254
Target Start/End: Original strand, 1721416 - 1721453
Alignment:
Q  217 gaagcatatttacagggaccaaaaccatattttagcct 254  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  1721416 gaagcatatttgcagggaccaaaaccatattttagcct 1721453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 217 - 254
Target Start/End: Complemental strand, 14772247 - 14772210
Alignment:
Q  217 gaagcatatttacagggaccaaaaccatattttagcct 254  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  14772247 gaagcatatttgcagggaccaaaaccatattttagcct 14772210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 217 - 254
Target Start/End: Complemental strand, 47336264 - 47336227
Alignment:
Q  217 gaagcatatttacagggaccaaaaccatattttagcct 254  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  47336264 gaagcatatttgcagggaccaaaaccatattttagcct 47336227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 149
Target Start/End: Original strand, 53113598 - 53113643
Alignment:
Q  104 cctgcaaaatattttacttttgaaaatagttcctggaggtactatt 149  Q
    |||||||||||||||||||||||||||||| |||| ||| ||||||    
T  53113598 cctgcaaaatattttacttttgaaaatagtccctgaagggactatt 53113643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 217 - 253
Target Start/End: Complemental strand, 15979374 - 15979338
Alignment:
Q  217 gaagcatatttacagggaccaaaaccatattttagcc 253  Q
    ||||||||||| |||||||||||||||||||||||||    
T  15979374 gaagcatatttgcagggaccaaaaccatattttagcc 15979338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 222 - 254
Target Start/End: Original strand, 20644845 - 20644877
Alignment:
Q  222 atatttacagggaccaaaaccatattttagcct 254  Q
    |||||||||||||||||||||||||||||||||    
T  20644845 atatttacagggaccaaaaccatattttagcct 20644877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 217 - 253
Target Start/End: Complemental strand, 26089766 - 26089730
Alignment:
Q  217 gaagcatatttacagggaccaaaaccatattttagcc 253  Q
    ||||||||||| |||||||||||||||||||||||||    
T  26089766 gaagcatatttgcagggaccaaaaccatattttagcc 26089730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 217 - 253
Target Start/End: Original strand, 45313827 - 45313863
Alignment:
Q  217 gaagcatatttacagggaccaaaaccatattttagcc 253  Q
    ||||||||||| |||||||||||||||||||||||||    
T  45313827 gaagcatatttgcagggaccaaaaccatattttagcc 45313863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 103 - 151
Target Start/End: Original strand, 50009134 - 50009182
Alignment:
Q  103 tcctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 151  Q
    |||||||||||||||||||||||||||||||   |||||| ||||||||    
T  50009134 tcctgcaaaatattttacttttgaaaatagtctttggagggactatttt 50009182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 151
Target Start/End: Original strand, 1721302 - 1721349
Alignment:
Q  104 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 151  Q
    ||||||||||||||||||| |||||||||| |||||||| | ||||||    
T  1721302 cctgcaaaatattttacttctgaaaatagtccctggagggattatttt 1721349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 263
Target Start/End: Original strand, 22008857 - 22008900
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcctcaatttaat 263  Q
    |||||||| |||||||||||||||||||||||||  ||||||||    
T  22008857 gcatatttgcagggaccaaaaccatattttagccaaaatttaat 22008900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 151
Target Start/End: Original strand, 25609847 - 25609894
Alignment:
Q  104 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 151  Q
    |||||||||||||||  ||||||||||||| |||||||| ||||||||    
T  25609847 cctgcaaaatattttgtttttgaaaatagtccctggagggactatttt 25609894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 151
Target Start/End: Original strand, 54767389 - 54767432
Alignment:
Q  108 caaaatattttacttttgaaaatagttcctggaggtactatttt 151  Q
    ||||||||||||||||| |||||||| |||||||| ||||||||    
T  54767389 caaaatattttacttttaaaaatagtccctggagggactatttt 54767432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 217 - 251
Target Start/End: Original strand, 2486866 - 2486900
Alignment:
Q  217 gaagcatatttacagggaccaaaaccatattttag 251  Q
    ||||||||||| |||||||||||||||||||||||    
T  2486866 gaagcatatttgcagggaccaaaaccatattttag 2486900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Original strand, 9262122 - 9262156
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  9262122 gcatatttgcagggaccaaaaccatattttagcct 9262156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Original strand, 9603886 - 9603920
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  9603886 gcatatttgcagggaccaaaaccatattttagcct 9603920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Original strand, 19844548 - 19844582
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  19844548 gcatatttgcagggaccaaaaccatattttagcct 19844582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 217 - 263
Target Start/End: Complemental strand, 20611056 - 20611010
Alignment:
Q  217 gaagcatatttacagggaccaaaaccatattttagcctcaatttaat 263  Q
    ||||||||||| ||||||| |||||||||||||||||| | ||||||    
T  20611056 gaagcatatttgcagggactaaaaccatattttagccttattttaat 20611010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 104 - 142
Target Start/End: Original strand, 20644720 - 20644758
Alignment:
Q  104 cctgcaaaatattttacttttgaaaatagttcctggagg 142  Q
    ||||||||||||||||||| |||||||||| ||||||||    
T  20644720 cctgcaaaatattttacttctgaaaatagtccctggagg 20644758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Complemental strand, 21553922 - 21553888
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  21553922 gcatatttgcagggaccaaaaccatattttagcct 21553888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Complemental strand, 25616008 - 25615974
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  25616008 gcatatttgcagggaccaaaaccatattttagcct 25615974  T

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Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Complemental strand, 26799921 - 26799887
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||||||||||| ||||||||||||||||||    
T  26799921 gcatatttacagggactaaaaccatattttagcct 26799887  T

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Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 105 - 151
Target Start/End: Original strand, 27681533 - 27681579
Alignment:
Q  105 ctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 151  Q
    ||||||||||||||||||||||||||||| |||| | | ||||||||    
T  27681533 ctgcaaaatattttacttttgaaaatagtccctgaatggactatttt 27681579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Complemental strand, 28552054 - 28552020
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  28552054 gcatatttgcagggaccaaaaccatattttagcct 28552020  T

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Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Original strand, 28552350 - 28552384
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  28552350 gcatatttgcagggaccaaaaccatattttagcct 28552384  T

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Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 104 - 138
Target Start/End: Complemental strand, 29490528 - 29490494
Alignment:
Q  104 cctgcaaaatattttacttttgaaaatagttcctg 138  Q
    |||||||||||||||||||||||||||||| ||||    
T  29490528 cctgcaaaatattttacttttgaaaatagtccctg 29490494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Complemental strand, 31480169 - 31480135
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  31480169 gcatatttgcagggaccaaaaccatattttagcct 31480135  T

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Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Complemental strand, 45002054 - 45002020
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  45002054 gcatatttgcagggaccaaaaccatattttagcct 45002020  T

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Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Complemental strand, 51550115 - 51550081
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  51550115 gcatatttgcagggaccaaaaccatattttagcct 51550081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Complemental strand, 52342228 - 52342194
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  52342228 gcatatttgcagggaccaaaaccatattttagcct 52342194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 104 - 138
Target Start/End: Complemental strand, 53113682 - 53113648
Alignment:
Q  104 cctgcaaaatattttacttttgaaaatagttcctg 138  Q
    |||||||||||||||||||||||||||||| ||||    
T  53113682 cctgcaaaatattttacttttgaaaatagtccctg 53113648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Complemental strand, 54608551 - 54608517
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  54608551 gcatatttgcagggaccaaaaccatattttagcct 54608517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 474076 - 474043
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  474076 catatttgcagggaccaaaaccatattttagcct 474043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 474376 - 474409
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  474376 catatttgcagggaccaaaaccatattttagcct 474409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 3417819 - 3417852
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    |||||||||||||||||||| |||||||||||||    
T  3417819 catatttacagggaccaaaaacatattttagcct 3417852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 253
Target Start/End: Original strand, 4035020 - 4035053
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcc 253  Q
    |||||||| |||||||||||||||||||||||||    
T  4035020 gcatatttgcagggaccaaaaccatattttagcc 4035053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 254
Target Start/End: Original strand, 5345653 - 5345690
Alignment:
Q  217 gaagcatatttacagggaccaaaaccatattttagcct 254  Q
    ||||||||||| ||||||| ||||||||||||||||||    
T  5345653 gaagcatatttgcagggactaaaaccatattttagcct 5345690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 254
Target Start/End: Original strand, 9597059 - 9597096
Alignment:
Q  217 gaagcatatttacagggaccaaaaccatattttagcct 254  Q
    ||||||||||| |||||| |||||||||||||||||||    
T  9597059 gaagcatatttgcagggaacaaaaccatattttagcct 9597096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 12740939 - 12740906
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  12740939 catatttgcagggaccaaaaccatattttagcct 12740906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 12741239 - 12741272
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  12741239 catatttgcagggaccaaaaccatattttagcct 12741272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 253
Target Start/End: Complemental strand, 16123172 - 16123139
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcc 253  Q
    |||||||||||||||| |||||||||||||||||    
T  16123172 gcatatttacagggactaaaaccatattttagcc 16123139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 133
Target Start/End: Original strand, 19297803 - 19297832
Alignment:
Q  104 cctgcaaaatattttacttttgaaaatagt 133  Q
    ||||||||||||||||||||||||||||||    
T  19297803 cctgcaaaatattttacttttgaaaatagt 19297832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 133
Target Start/End: Complemental strand, 19297868 - 19297839
Alignment:
Q  104 cctgcaaaatattttacttttgaaaatagt 133  Q
    ||||||||||||||||||||||||||||||    
T  19297868 cctgcaaaatattttacttttgaaaatagt 19297839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 254
Target Start/End: Original strand, 28452340 - 28452377
Alignment:
Q  217 gaagcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||||||  |||||||||||||||||||||||||    
T  28452340 gaagcatatttgtagggaccaaaaccatattttagcct 28452377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 29490711 - 29490744
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  29490711 catatttgcagggaccaaaaccatattttagcct 29490744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 149
Target Start/End: Complemental strand, 29678168 - 29678127
Alignment:
Q  108 caaaatattttacttttgaaaatagttcctggaggtactatt 149  Q
    |||||||||||||||||||||||||| | |||||| ||||||    
T  29678168 caaaatattttacttttgaaaatagtccttggagggactatt 29678127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 39132874 - 39132907
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  39132874 catatttgcagggaccaaaaccatattttagcct 39132907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 265
Target Start/End: Original strand, 39288865 - 39288910
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcctcaatttaataa 265  Q
    |||||||| ||||||  |||||||||||||||||| ||||||||||    
T  39288865 gcatatttgcagggattaaaaccatattttagcctaaatttaataa 39288910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 254
Target Start/End: Complemental strand, 40277858 - 40277821
Alignment:
Q  217 gaagcatatttacagggaccaaaaccatattttagcct 254  Q
    ||||||||||| ||||||||||||||| ||||||||||    
T  40277858 gaagcatatttgcagggaccaaaaccacattttagcct 40277821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 133
Target Start/End: Original strand, 40278037 - 40278066
Alignment:
Q  104 cctgcaaaatattttacttttgaaaatagt 133  Q
    ||||||||||||||||||||||||||||||    
T  40278037 cctgcaaaatattttacttttgaaaatagt 40278066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 253
Target Start/End: Original strand, 40370556 - 40370589
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcc 253  Q
    |||||||| |||||||||||||||||||||||||    
T  40370556 gcatatttgcagggaccaaaaccatattttagcc 40370589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 40545596 - 40545563
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  40545596 catatttgcagggaccaaaaccatattttagcct 40545563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 47005186 - 47005153
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  47005186 catatttgcagggaccaaaaccatattttagcct 47005153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 47336549 - 47336582
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  47336549 catatttgcagggaccaaaaccatattttagcct 47336582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 253
Target Start/End: Complemental strand, 49323815 - 49323782
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcc 253  Q
    |||||||| |||||||||||||||||||||||||    
T  49323815 gcatatttgcagggaccaaaaccatattttagcc 49323782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 250
Target Start/End: Original strand, 49324114 - 49324143
Alignment:
Q  221 catatttacagggaccaaaaccatatttta 250  Q
    ||||||||||||||||||||||||||||||    
T  49324114 catatttacagggaccaaaaccatatttta 49324143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 51550414 - 51550447
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  51550414 catatttgcagggaccaaaaccatattttagcct 51550447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 254
Target Start/End: Original strand, 51834906 - 51834943
Alignment:
Q  217 gaagcatatttacagggaccaaaaccatattttagcct 254  Q
    ||||||||||| ||||||| ||||||||||||||||||    
T  51834906 gaagcatatttgcagggactaaaaccatattttagcct 51834943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 53113475 - 53113442
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  53113475 catatttgcagggaccaaaaccatattttagcct 53113442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 54608831 - 54608864
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  54608831 catatttgcagggaccaaaaccatattttagcct 54608864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 217 - 253
Target Start/End: Original strand, 275797 - 275833
Alignment:
Q  217 gaagcatatttacagggaccaaaaccatattttagcc 253  Q
    ||||||||||||||||||| |||| ||||||||||||    
T  275797 gaagcatatttacagggactaaaatcatattttagcc 275833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 220 - 260
Target Start/End: Original strand, 3152078 - 3152118
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcctcaattt 260  Q
    |||||||| ||||||| |||||||||||||||||| |||||    
T  3152078 gcatatttgcagggactaaaaccatattttagcctaaattt 3152118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 221 - 253
Target Start/End: Complemental strand, 4034749 - 4034717
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcc 253  Q
    ||||||| |||||||||||||||||||||||||    
T  4034749 catatttgcagggaccaaaaccatattttagcc 4034717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 222 - 254
Target Start/End: Original strand, 20405192 - 20405224
Alignment:
Q  222 atatttacagggaccaaaaccatattttagcct 254  Q
    |||||| ||||||||||||||||||||||||||    
T  20405192 atatttgcagggaccaaaaccatattttagcct 20405224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 220 - 252
Target Start/End: Original strand, 25610097 - 25610129
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagc 252  Q
    |||||||| ||||||||||||||||||||||||    
T  25610097 gcatatttgcagggaccaaaaccatattttagc 25610129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 103 - 151
Target Start/End: Original strand, 25710589 - 25710637
Alignment:
Q  103 tcctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 151  Q
    ||||||||||| ||||  ||||||||||||| |||||||| ||||||||    
T  25710589 tcctgcaaaattttttgtttttgaaaatagtccctggagggactatttt 25710637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 221 - 253
Target Start/End: Original strand, 26090046 - 26090078
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcc 253  Q
    ||||||| |||||||||||||||||||||||||    
T  26090046 catatttgcagggaccaaaaccatattttagcc 26090078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 222 - 250
Target Start/End: Original strand, 27499059 - 27499087
Alignment:
Q  222 atatttacagggaccaaaaccatatttta 250  Q
    |||||||||||||||||||||||||||||    
T  27499059 atatttacagggaccaaaaccatatttta 27499087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 222 - 254
Target Start/End: Original strand, 30106189 - 30106221
Alignment:
Q  222 atatttacagggaccaaaaccatattttagcct 254  Q
    |||||| ||||||||||||||||||||||||||    
T  30106189 atatttgcagggaccaaaaccatattttagcct 30106221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 105 - 133
Target Start/End: Complemental strand, 35533516 - 35533488
Alignment:
Q  105 ctgcaaaatattttacttttgaaaatagt 133  Q
    |||||||||||||||||||||||||||||    
T  35533516 ctgcaaaatattttacttttgaaaatagt 35533488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 105 - 133
Target Start/End: Complemental strand, 39132691 - 39132663
Alignment:
Q  105 ctgcaaaatattttacttttgaaaatagt 133  Q
    |||||||||||||||||||||||||||||    
T  39132691 ctgcaaaatattttacttttgaaaatagt 39132663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 222 - 254
Target Start/End: Original strand, 39820632 - 39820664
Alignment:
Q  222 atatttacagggaccaaaaccatattttagcct 254  Q
    |||||| ||||||||||||||||||||||||||    
T  39820632 atatttgcagggaccaaaaccatattttagcct 39820664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 221 - 253
Target Start/End: Complemental strand, 43441302 - 43441270
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcc 253  Q
    ||||||| |||||||||||||||||||||||||    
T  43441302 catatttgcagggaccaaaaccatattttagcc 43441270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 222 - 254
Target Start/End: Original strand, 47005488 - 47005520
Alignment:
Q  222 atatttacagggaccaaaaccatattttagcct 254  Q
    |||||| ||||||||||||||||||||||||||    
T  47005488 atatttgcagggaccaaaaccatattttagcct 47005520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 222 - 254
Target Start/End: Original strand, 47433837 - 47433869
Alignment:
Q  222 atatttacagggaccaaaaccatattttagcct 254  Q
    |||||| ||||||||||||||||||||||||||    
T  47433837 atatttgcagggaccaaaaccatattttagcct 47433869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 103 - 151
Target Start/End: Original strand, 52342274 - 52342322
Alignment:
Q  103 tcctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 151  Q
    ||||||||||||||||  ||||||||||||| |||| ||| ||||||||    
T  52342274 tcctgcaaaatattttgtttttgaaaatagtccctgcagggactatttt 52342322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 2)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 104 - 148
Target Start/End: Original strand, 27214 - 27258
Alignment:
Q  104 cctgcaaaatattttacttttgaaaatagttcctggaggtactat 148  Q
    ||||||||||||||||||||||||||||||||||||||| |||||    
T  27214 cctgcaaaatattttacttttgaaaatagttcctggagggactat 27258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 260
Target Start/End: Original strand, 27332 - 27371
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcctcaattt 260  Q
    ||||||| |||||||||||||||||||||||||| |||||    
T  27332 catatttgcagggaccaaaaccatattttagcctaaattt 27371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 103 - 151
Target Start/End: Original strand, 30037938 - 30037986
Alignment:
Q  103 tcctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 151  Q
    ||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  30037938 tcctgcaaaatattttacttttgaaaatagtccctggagggactatttt 30037986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 104 - 151
Target Start/End: Complemental strand, 19267715 - 19267668
Alignment:
Q  104 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 151  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||    
T  19267715 cctgcaaaatattttacttttgaaaatagtccctggagggactatttt 19267668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 253
Target Start/End: Complemental strand, 19267601 - 19267565
Alignment:
Q  217 gaagcatatttacagggaccaaaaccatattttagcc 253  Q
    |||||||||||||||||||||||||||||||||||||    
T  19267601 gaagcatatttacagggaccaaaaccatattttagcc 19267565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 104 - 151
Target Start/End: Original strand, 19690610 - 19690657
Alignment:
Q  104 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 151  Q
    ||||||||| |||||||||||||||||||| |||||||| ||||||||    
T  19690610 cctgcaaaaaattttacttttgaaaatagtccctggagggactatttt 19690657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 104 - 151
Target Start/End: Complemental strand, 23628947 - 23628900
Alignment:
Q  104 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 151  Q
    ||||||||||||||||||||||||||||||  ||||||| ||||||||    
T  23628947 cctgcaaaatattttacttttgaaaatagtcactggagggactatttt 23628900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 217 - 254
Target Start/End: Complemental strand, 1007160 - 1007123
Alignment:
Q  217 gaagcatatttacagggaccaaaaccatattttagcct 254  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  1007160 gaagcatatttgcagggaccaaaaccatattttagcct 1007123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 3414720 - 3414753
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||||||||||||||||||||||||||||||    
T  3414720 catatttacagggaccaaaaccatattttagcct 3414753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 30479095 - 30479062
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||||||||||||||||||||||||||||||    
T  30479095 catatttacagggaccaaaaccatattttagcct 30479062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 220 - 260
Target Start/End: Original strand, 6412546 - 6412586
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcctcaattt 260  Q
    |||||||| |||||||||||||||||||||||||| |||||    
T  6412546 gcatatttgcagggaccaaaaccatattttagccttaattt 6412586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 151
Target Start/End: Complemental strand, 8169938 - 8169891
Alignment:
Q  104 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 151  Q
    ||||||||||||||||||||||||||| || |||| ||| ||||||||    
T  8169938 cctgcaaaatattttacttttgaaaattgtccctgtagggactatttt 8169891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 151
Target Start/End: Complemental strand, 12419857 - 12419810
Alignment:
Q  104 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 151  Q
    |||||||||||||||  ||||||||||||| |||||||| ||||||||    
T  12419857 cctgcaaaatattttgtttttgaaaatagtccctggagggactatttt 12419810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 259
Target Start/End: Complemental strand, 13268142 - 13268103
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcctcaatt 259  Q
    |||||||| |||||||||||||||||||||||||| ||||    
T  13268142 gcatatttgcagggaccaaaaccatattttagccttaatt 13268103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 151
Target Start/End: Original strand, 30479276 - 30479319
Alignment:
Q  108 caaaatattttacttttgaaaatagttcctggaggtactatttt 151  Q
    |||||||||||||||||||||||||| |||||||  ||||||||    
T  30479276 caaaatattttacttttgaaaatagtccctggagagactatttt 30479319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 255
Target Start/End: Complemental strand, 33808653 - 33808618
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcctc 255  Q
    |||||||||||||||| |||||||||||||||||||    
T  33808653 gcatatttacagggactaaaaccatattttagcctc 33808618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Original strand, 1007476 - 1007510
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  1007476 gcatatttgcagggaccaaaaccatattttagcct 1007510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Complemental strand, 3414420 - 3414386
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  3414420 gcatatttgcagggaccaaaaccatattttagcct 3414386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Original strand, 3968976 - 3969010
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  3968976 gcatatttgcagggaccaaaaccatattttagcct 3969010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Original strand, 12299107 - 12299141
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  12299107 gcatatttgcagggaccaaaaccatattttagcct 12299141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Original strand, 19321098 - 19321132
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  19321098 gcatatttgcagggaccaaaaccatattttagcct 19321132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Original strand, 20467685 - 20467719
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  20467685 gcatatttgcagggaccaaaaccatattttagcct 20467719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Complemental strand, 21147437 - 21147403
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  21147437 gcatatttgcagggaccaaaaccatattttagcct 21147403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Original strand, 21385551 - 21385585
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  21385551 gcatatttgcagggaccaaaaccatattttagcct 21385585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Original strand, 21994370 - 21994404
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  21994370 gcatatttgcagggaccaaaaccatattttagcct 21994404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Complemental strand, 22543387 - 22543353
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  22543387 gcatatttgcagggaccaaaaccatattttagcct 22543353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 221 - 259
Target Start/End: Original strand, 22543686 - 22543724
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcctcaatt 259  Q
    ||||||| |||||||||||||||||||||||||| ||||    
T  22543686 catatttgcagggaccaaaaccatattttagcctaaatt 22543724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Complemental strand, 23502270 - 23502236
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  23502270 gcatatttgcagggaccaaaaccatattttagcct 23502236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Original strand, 25137324 - 25137358
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  25137324 gcatatttgcagggaccaaaaccatattttagcct 25137358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 3276322 - 3276355
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  3276322 catatttgcagggaccaaaaccatattttagcct 3276355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 3968677 - 3968644
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  3968677 catatttgcagggaccaaaaccatattttagcct 3968644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 6412250 - 6412217
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  6412250 catatttgcagggaccaaaaccatattttagcct 6412217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 8170119 - 8170152
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  8170119 catatttgcagggaccaaaaccatattttagcct 8170152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 10910932 - 10910965
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  10910932 catatttgcagggaccaaaaccatattttagcct 10910965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 12757642 - 12757609
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  12757642 catatttgcagggaccaaaaccatattttagcct 12757609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 254
Target Start/End: Complemental strand, 14655415 - 14655378
Alignment:
Q  217 gaagcatatttacagggaccaaaaccatattttagcct 254  Q
    ||||||||||| ||||||| ||||||||||||||||||    
T  14655415 gaagcatatttgcagggactaaaaccatattttagcct 14655378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 17765041 - 17765008
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  17765041 catatttgcagggaccaaaaccatattttagcct 17765008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 18024343 - 18024376
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  18024343 catatttgcagggaccaaaaccatattttagcct 18024376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 19267880 - 19267913
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    |||||||||||| |||||||||||||||||||||    
T  19267880 catatttacaggaaccaaaaccatattttagcct 19267913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 19690425 - 19690392
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  19690425 catatttgcagggaccaaaaccatattttagcct 19690392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 21385283 - 21385250
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  21385283 catatttgcagggaccaaaaccatattttagcct 21385250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 218 - 254
Target Start/End: Complemental strand, 6468345 - 6468309
Alignment:
Q  218 aagcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||||| ||||||| ||||||||||||||||||    
T  6468345 aagcatatttgcagggactaaaaccatattttagcct 6468309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 217 - 253
Target Start/End: Complemental strand, 17771947 - 17771911
Alignment:
Q  217 gaagcatatttacagggaccaaaaccatattttagcc 253  Q
    ||||||||||| ||||||| |||||||||||||||||    
T  17771947 gaagcatatttgcagggactaaaaccatattttagcc 17771911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 221 - 253
Target Start/End: Complemental strand, 24901271 - 24901239
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcc 253  Q
    ||||||| |||||||||||||||||||||||||    
T  24901271 catatttgcagggaccaaaaccatattttagcc 24901239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 221 - 253
Target Start/End: Complemental strand, 31198647 - 31198615
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcc 253  Q
    ||||||| |||||||||||||||||||||||||    
T  31198647 catatttgcagggaccaaaaccatattttagcc 31198615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 75)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 104 - 151
Target Start/End: Original strand, 23939762 - 23939809
Alignment:
Q  104 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 151  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||    
T  23939762 cctgcaaaatattttacttttgaaaatagtccctggaggaactatttt 23939809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 104 - 151
Target Start/End: Original strand, 13155101 - 13155148
Alignment:
Q  104 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 151  Q
    |||||||||||||||| ||||||||||||| |||||||| ||||||||    
T  13155101 cctgcaaaatattttaattttgaaaatagtccctggagggactatttt 13155148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 104 - 151
Target Start/End: Complemental strand, 13779321 - 13779274
Alignment:
Q  104 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 151  Q
    ||||||||||||||||||||||||||||||  ||||||| ||||||||    
T  13779321 cctgcaaaatattttacttttgaaaatagtctctggagggactatttt 13779274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 104 - 151
Target Start/End: Complemental strand, 30969544 - 30969497
Alignment:
Q  104 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 151  Q
    |||||||||||||||||||| ||||||||| |||||||| ||||||||    
T  30969544 cctgcaaaatattttactttagaaaatagtccctggagggactatttt 30969497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 108 - 151
Target Start/End: Complemental strand, 33652336 - 33652293
Alignment:
Q  108 caaaatattttacttttgaaaatagttcctggaggtactatttt 151  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||    
T  33652336 caaaatattttacgtttgaaaatagttcctggaggaactatttt 33652293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 254 - 352
Target Start/End: Original strand, 37767485 - 37767586
Alignment:
Q  254 tcaatttaataacaaaataattgag---tatgtctagttaaaaattggagaggatgtttgtgttgtttaagaaaaccttatcagaggttagtgtaattta 350  Q
    ||||||||||||||||||||  |||   ||||| |||||||||| | ||| ||||||||||||| ||||| || |||| |   |||||||||||||||||    
T  37767485 tcaatttaataacaaaataagggaggtttatgtttagttaaaaactagaggggatgtttgtgttatttaacaatacctcaggggaggttagtgtaattta 37767584  T
Q  351 cc 352  Q
    ||    
T  37767585 cc 37767586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 220 - 254
Target Start/End: Complemental strand, 25702545 - 25702511
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||||||||||||||||||||||||||||||    
T  25702545 gcatatttacagggaccaaaaccatattttagcct 25702511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 217 - 254
Target Start/End: Original strand, 9496687 - 9496724
Alignment:
Q  217 gaagcatatttacagggaccaaaaccatattttagcct 254  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  9496687 gaagcatatttgcagggaccaaaaccatattttagcct 9496724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 217 - 254
Target Start/End: Original strand, 10540746 - 10540783
Alignment:
Q  217 gaagcatatttacagggaccaaaaccatattttagcct 254  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  10540746 gaagcatatttgcagggaccaaaaccatattttagcct 10540783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 151
Target Start/End: Complemental strand, 17073951 - 17073907
Alignment:
Q  106 tgcaaaatattttacttttgaaaatagttcctggaggtactatttt 151  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||    
T  17073951 tgcaaaatattttacttttgaaaatagtt-ctggagggactatttt 17073907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 151
Target Start/End: Original strand, 17574319 - 17574363
Alignment:
Q  106 tgcaaaatattttacttttgaaaatagttcctggaggtactatttt 151  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||    
T  17574319 tgcaaaatattttacttttgaaaatagtt-ctggagggactatttt 17574363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 220 - 260
Target Start/End: Complemental strand, 28346427 - 28346387
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcctcaattt 260  Q
    |||||||| |||||||||||||||||||||||||| |||||    
T  28346427 gcatatttgcagggaccaaaaccatattttagccttaattt 28346387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 220 - 264
Target Start/End: Original strand, 28346725 - 28346769
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcctcaatttaata 264  Q
    |||||||| |||||||||||||||||||||||||| || ||||||    
T  28346725 gcatatttgcagggaccaaaaccatattttagcctaaaattaata 28346769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 217 - 253
Target Start/End: Original strand, 37536383 - 37536419
Alignment:
Q  217 gaagcatatttacagggaccaaaaccatattttagcc 253  Q
    ||||||||||| |||||||||||||||||||||||||    
T  37536383 gaagcatatttgcagggaccaaaaccatattttagcc 37536419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 260
Target Start/End: Original strand, 3512234 - 3512273
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcctcaattt 260  Q
    ||||||| |||||||||||||||||||||||||| |||||    
T  3512234 catatttgcagggaccaaaaccatattttagcctaaattt 3512273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 151
Target Start/End: Complemental strand, 3680678 - 3680631
Alignment:
Q  104 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 151  Q
    |||||||||||||||||||||||||| ||| |||||||| || |||||    
T  3680678 cctgcaaaatattttacttttgaaaaaagtccctggagggacgatttt 3680631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 151
Target Start/End: Original strand, 6146697 - 6146744
Alignment:
Q  104 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 151  Q
    |||||||||| ||||  |||||||||||||||||||||| ||||||||    
T  6146697 cctgcaaaattttttgtttttgaaaatagttcctggagggactatttt 6146744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 260
Target Start/End: Complemental strand, 11019552 - 11019513
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcctcaattt 260  Q
    ||||||| |||||||||||||||||||||||||| |||||    
T  11019552 catatttgcagggaccaaaaccatattttagccttaattt 11019513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 151
Target Start/End: Original strand, 14848040 - 14848087
Alignment:
Q  104 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 151  Q
    ||||||||||||||||||| | |||||||| |||||||| ||||||||    
T  14848040 cctgcaaaatattttacttctaaaaatagtccctggagggactatttt 14848087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 139
Target Start/End: Original strand, 24090334 - 24090369
Alignment:
Q  104 cctgcaaaatattttacttttgaaaatagttcctgg 139  Q
    |||||||||||||||||||||||||||||| |||||    
T  24090334 cctgcaaaatattttacttttgaaaatagtccctgg 24090369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 151
Target Start/End: Original strand, 28497469 - 28497516
Alignment:
Q  104 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 151  Q
    |||||||||||||||||||||||||||||| |||  ||| ||||||||    
T  28497469 cctgcaaaatattttacttttgaaaatagtccctccagggactatttt 28497516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 151
Target Start/End: Original strand, 33652271 - 33652318
Alignment:
Q  104 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 151  Q
    |||||||||||||||| |||||||||||||||||  ||| ||||||||    
T  33652271 cctgcaaaatattttatttttgaaaatagttcctccaggaactatttt 33652318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 217 - 251
Target Start/End: Complemental strand, 2811471 - 2811437
Alignment:
Q  217 gaagcatatttacagggaccaaaaccatattttag 251  Q
    ||||||||||||||| |||||||||||||||||||    
T  2811471 gaagcatatttacagagaccaaaaccatattttag 2811437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Original strand, 4710187 - 4710221
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  4710187 gcatatttgcagggaccaaaaccatattttagcct 4710221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 250
Target Start/End: Original strand, 9175338 - 9175368
Alignment:
Q  220 gcatatttacagggaccaaaaccatatttta 250  Q
    |||||||||||||||||||||||||||||||    
T  9175338 gcatatttacagggaccaaaaccatatttta 9175368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Original strand, 10337416 - 10337450
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  10337416 gcatatttgcagggaccaaaaccatattttagcct 10337450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Original strand, 11019824 - 11019858
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  11019824 gcatatttgcagggaccaaaaccatattttagcct 11019858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Complemental strand, 11976406 - 11976372
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  11976406 gcatatttgcagggaccaaaaccatattttagcct 11976372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 103 - 133
Target Start/End: Original strand, 13796450 - 13796480
Alignment:
Q  103 tcctgcaaaatattttacttttgaaaatagt 133  Q
    |||||||||||||||||||||||||||||||    
T  13796450 tcctgcaaaatattttacttttgaaaatagt 13796480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 262
Target Start/End: Complemental strand, 16643694 - 16643652
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcctcaatttaa 262  Q
    |||||||| ||||||| |||||||||||||||||| |||||||    
T  16643694 gcatatttgcagggactaaaaccatattttagcctaaatttaa 16643652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Complemental strand, 20277725 - 20277691
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  20277725 gcatatttgcagggaccaaaaccatattttagcct 20277691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Complemental strand, 21064352 - 21064318
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  21064352 gcatatttgcagggaccaaaaccatattttagcct 21064318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Original strand, 27117943 - 27117977
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  27117943 gcatatttgcagggaccaaaaccatattttagcct 27117977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Original strand, 32726238 - 32726272
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  32726238 gcatatttgcagggaccaaaaccatattttagcct 32726272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Complemental strand, 34963333 - 34963299
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  34963333 gcatatttgcagggaccaaaaccatattttagcct 34963299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Complemental strand, 37536119 - 37536085
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  37536119 gcatatttgcagggaccaaaaccatattttagcct 37536085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 253
Target Start/End: Original strand, 2728564 - 2728597
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcc 253  Q
    |||||||| |||||||||||||||||||||||||    
T  2728564 gcatatttgcagggaccaaaaccatattttagcc 2728597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 254
Target Start/End: Original strand, 4375974 - 4376011
Alignment:
Q  217 gaagcatatttacagggaccaaaaccatattttagcct 254  Q
    ||||||||||| ||||||| ||||||||||||||||||    
T  4375974 gaagcatatttgcagggactaaaaccatattttagcct 4376011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 253
Target Start/End: Original strand, 7326388 - 7326421
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcc 253  Q
    |||||||| |||||||||||||||||||||||||    
T  7326388 gcatatttgcagggaccaaaaccatattttagcc 7326421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 7420262 - 7420229
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  7420262 catatttgcagggaccaaaaccatattttagcct 7420229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 8298943 - 8298976
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  8298943 catatttgcagggaccaaaaccatattttagcct 8298976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 9496373 - 9496340
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  9496373 catatttgcagggaccaaaaccatattttagcct 9496340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 10337151 - 10337118
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  10337151 catatttgcagggaccaaaaccatattttagcct 10337118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 253
Target Start/End: Original strand, 13232529 - 13232562
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcc 253  Q
    |||||||| |||||||||||||||||||||||||    
T  13232529 gcatatttgcagggaccaaaaccatattttagcc 13232562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 17073839 - 17073806
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  17073839 catatttgcagggaccaaaaccatattttagcct 17073806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 17574431 - 17574464
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  17574431 catatttgcagggaccaaaaccatattttagcct 17574464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 254
Target Start/End: Complemental strand, 18549237 - 18549200
Alignment:
Q  217 gaagcatatttacagggaccaaaaccatattttagcct 254  Q
    ||||||||||| ||||||| ||||||||||||||||||    
T  18549237 gaagcatatttgcagggactaaaaccatattttagcct 18549200  T

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Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 20984178 - 20984145
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  20984178 catatttgcagggaccaaaaccatattttagcct 20984145  T

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Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 25600262 - 25600229
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  25600262 catatttgcagggaccaaaaccatattttagcct 25600229  T

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Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 25702777 - 25702810
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  25702777 catatttgcagggaccaaaaccatattttagcct 25702810  T

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Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 253
Target Start/End: Original strand, 30969684 - 30969717
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcc 253  Q
    |||||||| |||||||||||||||||||||||||    
T  30969684 gcatatttgcagggaccaaaaccatattttagcc 30969717  T

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Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 32725939 - 32725906
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  32725939 catatttgcagggaccaaaaccatattttagcct 32725906  T

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Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 254
Target Start/End: Complemental strand, 33636358 - 33636321
Alignment:
Q  217 gaagcatatttacagggaccaaaaccatattttagcct 254  Q
    ||||||||||| ||||||| ||||||||||||||||||    
T  33636358 gaagcatatttgcagggactaaaaccatattttagcct 33636321  T

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Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 35097360 - 35097327
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  35097360 catatttgcagggaccaaaaccatattttagcct 35097327  T

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Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 253
Target Start/End: Original strand, 35097659 - 35097692
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcc 253  Q
    |||||||| |||||||||||||||||||||||||    
T  35097659 gcatatttgcagggaccaaaaccatattttagcc 35097692  T

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Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 35346966 - 35346999
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  35346966 catatttgcagggaccaaaaccatattttagcct 35346999  T

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Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 38930334 - 38930301
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||||||||||| ||||||||||||||||||    
T  38930334 catatttacagggactaaaaccatattttagcct 38930301  T

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Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 217 - 253
Target Start/End: Complemental strand, 1162945 - 1162909
Alignment:
Q  217 gaagcatatttacagggaccaaaaccatattttagcc 253  Q
    ||||||||||| ||||||| |||||||||||||||||    
T  1162945 gaagcatatttgcagggactaaaaccatattttagcc 1162909  T

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Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 221 - 253
Target Start/End: Complemental strand, 1778596 - 1778564
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcc 253  Q
    ||||||| |||||||||||||||||||||||||    
T  1778596 catatttgcagggaccaaaaccatattttagcc 1778564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 221 - 253
Target Start/End: Original strand, 3031570 - 3031602
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcc 253  Q
    |||||||||||||||||||| ||||||||||||    
T  3031570 catatttacagggaccaaaaacatattttagcc 3031602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 221 - 253
Target Start/End: Original strand, 7185972 - 7186004
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcc 253  Q
    ||||||| |||||||||||||||||||||||||    
T  7185972 catatttgcagggaccaaaaccatattttagcc 7186004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 221 - 253
Target Start/End: Complemental strand, 8298619 - 8298587
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcc 253  Q
    ||||||| |||||||||||||||||||||||||    
T  8298619 catatttgcagggaccaaaaccatattttagcc 8298587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 104 - 132
Target Start/End: Complemental strand, 9175157 - 9175129
Alignment:
Q  104 cctgcaaaatattttacttttgaaaatag 132  Q
    |||||||||||||||||||||||||||||    
T  9175157 cctgcaaaatattttacttttgaaaatag 9175129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 221 - 253
Target Start/End: Original strand, 14489041 - 14489073
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcc 253  Q
    ||||||| |||||||||||||||||||||||||    
T  14489041 catatttgcagggaccaaaaccatattttagcc 14489073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 220 - 252
Target Start/End: Original strand, 24090455 - 24090487
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagc 252  Q
    |||||||| ||||||||||||||||||||||||    
T  24090455 gcatatttgcagggaccaaaaccatattttagc 24090487  T

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Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 103 - 151
Target Start/End: Complemental strand, 32195564 - 32195516
Alignment:
Q  103 tcctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 151  Q
    ||||||||||||||||  ||||||||||||| |||| ||| ||||||||    
T  32195564 tcctgcaaaatattttgtttttgaaaatagtccctgaagggactatttt 32195516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 217 - 253
Target Start/End: Complemental strand, 33526088 - 33526052
Alignment:
Q  217 gaagcatatttacagggaccaaaaccatattttagcc 253  Q
    ||||||||||| ||||||| |||||||||||||||||    
T  33526088 gaagcatatttgcagggactaaaaccatattttagcc 33526052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 221 - 253
Target Start/End: Original strand, 34963632 - 34963664
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcc 253  Q
    ||||||| |||||||||||||||||||||||||    
T  34963632 catatttgcagggaccaaaaccatattttagcc 34963664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 221 - 253
Target Start/End: Complemental strand, 35346661 - 35346629
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcc 253  Q
    ||||||| |||||||||||||||||||||||||    
T  35346661 catatttgcagggaccaaaaccatattttagcc 35346629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 104 - 132
Target Start/End: Original strand, 36044518 - 36044546
Alignment:
Q  104 cctgcaaaatattttacttttgaaaatag 132  Q
    |||||||||||||||||||||||||||||    
T  36044518 cctgcaaaatattttacttttgaaaatag 36044546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 217 - 253
Target Start/End: Complemental strand, 40844192 - 40844156
Alignment:
Q  217 gaagcatatttacagggaccaaaaccatattttagcc 253  Q
    ||||||||||| ||||||| |||||||||||||||||    
T  40844192 gaagcatatttgcagggactaaaaccatattttagcc 40844156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 221 - 253
Target Start/End: Complemental strand, 42132896 - 42132864
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcc 253  Q
    ||||||| |||||||||||||||||||||||||    
T  42132896 catatttgcagggaccaaaaccatattttagcc 42132864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 221 - 253
Target Start/End: Original strand, 42133122 - 42133154
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcc 253  Q
    ||||||| |||||||||||||||||||||||||    
T  42133122 catatttgcagggaccaaaaccatattttagcc 42133154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 107 - 151
Target Start/End: Complemental strand, 42429902 - 42429858
Alignment:
Q  107 gcaaaatattttacttttgaaaatagttcctggaggtactatttt 151  Q
    ||||||||||||||||||||||||||| || ||||| | ||||||    
T  42429902 gcaaaatattttacttttgaaaatagtccccggagggattatttt 42429858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 221 - 253
Target Start/End: Original strand, 42430088 - 42430120
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcc 253  Q
    ||||||| |||||||||||||||||||||||||    
T  42430088 catatttgcagggaccaaaaccatattttagcc 42430120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 104 - 151
Target Start/End: Complemental strand, 2945630 - 2945583
Alignment:
Q  104 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 151  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||    
T  2945630 cctgcaaaatattttacttttgaatatagttcctggagggactatttt 2945583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 104 - 151
Target Start/End: Complemental strand, 6892178 - 6892131
Alignment:
Q  104 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 151  Q
    |||||||||||||||||||||||||| ||| |||||||| ||||||||    
T  6892178 cctgcaaaatattttacttttgaaaagagtccctggagggactatttt 6892131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 104 - 147
Target Start/End: Complemental strand, 22540078 - 22540035
Alignment:
Q  104 cctgcaaaatattttacttttgaaaatagttcctggaggtacta 147  Q
    |||||||||||||||||||||||||||||| |||||||| ||||    
T  22540078 cctgcaaaatattttacttttgaaaatagtccctggagggacta 22540035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 104 - 151
Target Start/End: Original strand, 28262794 - 28262841
Alignment:
Q  104 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 151  Q
    |||||||||||||||||||||||||||||| ||| |||| ||||||||    
T  28262794 cctgcaaaatattttacttttgaaaatagtccctagagggactatttt 28262841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 220 - 254
Target Start/End: Complemental strand, 5354801 - 5354767
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||||||||||||||||||||||||||||||    
T  5354801 gcatatttacagggaccaaaaccatattttagcct 5354767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 287 - 349
Target Start/End: Complemental strand, 11669677 - 11669615
Alignment:
Q  287 gttaaaaattggagaggatgtttgtgttgtttaagaaaaccttatcagaggttagtgtaattt 349  Q
    |||||||| | ||| ||||||||||||| |||||||| |||||||  ||||||||||||||||    
T  11669677 gttaaaaaatagagtggatgtttgtgttatttaagaagaccttatgggaggttagtgtaattt 11669615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 142
Target Start/End: Complemental strand, 19005754 - 19005716
Alignment:
Q  104 cctgcaaaatattttacttttgaaaatagttcctggagg 142  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  19005754 cctgcaaaatattttacttttgaaaatagtccctggagg 19005716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 220 - 254
Target Start/End: Complemental strand, 39438774 - 39438740
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||||||||||||||||||||||||||||||    
T  39438774 gcatatttacagggaccaaaaccatattttagcct 39438740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 217 - 254
Target Start/End: Complemental strand, 5233844 - 5233807
Alignment:
Q  217 gaagcatatttacagggaccaaaaccatattttagcct 254  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  5233844 gaagcatatttgcagggaccaaaaccatattttagcct 5233807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 217 - 254
Target Start/End: Original strand, 11767239 - 11767276
Alignment:
Q  217 gaagcatatttacagggaccaaaaccatattttagcct 254  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  11767239 gaagcatatttgcagggaccaaaaccatattttagcct 11767276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 151
Target Start/End: Original strand, 44841572 - 44841617
Alignment:
Q  106 tgcaaaatattttacttttgaaaatagttcctggaggtactatttt 151  Q
    ||||||||||||||||||||||||||||  ||||||| ||||||||    
T  44841572 tgcaaaatattttacttttgaaaatagtcgctggagggactatttt 44841617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 220 - 260
Target Start/End: Original strand, 38486757 - 38486797
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcctcaattt 260  Q
    ||||||||||||||| ||||||||||||||||||| |||||    
T  38486757 gcatatttacagggatcaaaaccatattttagcctaaattt 38486797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 259
Target Start/End: Original strand, 3975805 - 3975844
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcctcaatt 259  Q
    |||||||| |||||||||||||||||||||||||| ||||    
T  3975805 gcatatttgcagggaccaaaaccatattttagcctaaatt 3975844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 260
Target Start/End: Complemental strand, 46828976 - 46828937
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcctcaattt 260  Q
    ||||||| |||||||||||||||||||||||||| |||||    
T  46828976 catatttgcagggaccaaaaccatattttagccttaattt 46828937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Original strand, 1614871 - 1614905
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  1614871 gcatatttgcagggaccaaaaccatattttagcct 1614905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Complemental strand, 3975582 - 3975548
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  3975582 gcatatttgcagggaccaaaaccatattttagcct 3975548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 217 - 251
Target Start/End: Original strand, 6847083 - 6847117
Alignment:
Q  217 gaagcatatttacagggaccaaaaccatattttag 251  Q
    ||||||||||| |||||||||||||||||||||||    
T  6847083 gaagcatatttgcagggaccaaaaccatattttag 6847117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Original strand, 8144625 - 8144659
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  8144625 gcatatttgcagggaccaaaaccatattttagcct 8144659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Original strand, 9659656 - 9659690
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  9659656 gcatatttgcagggaccaaaaccatattttagcct 9659690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Complemental strand, 23399645 - 23399611
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  23399645 gcatatttgcagggaccaaaaccatattttagcct 23399611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Original strand, 23676419 - 23676453
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  23676419 gcatatttgcagggaccaaaaccatattttagcct 23676453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Original strand, 25092515 - 25092549
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  25092515 gcatatttgcagggaccaaaaccatattttagcct 25092549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Original strand, 25988716 - 25988750
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  25988716 gcatatttgcagggaccaaaaccatattttagcct 25988750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Original strand, 26878038 - 26878072
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  26878038 gcatatttgcagggaccaaaaccatattttagcct 26878072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Complemental strand, 28262746 - 28262712
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  28262746 gcatatttgcagggaccaaaaccatattttagcct 28262712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Original strand, 29198629 - 29198663
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  29198629 gcatatttgcagggaccaaaaccatattttagcct 29198663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Complemental strand, 41053875 - 41053841
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  41053875 gcatatttgcagggaccaaaaccatattttagcct 41053841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Original strand, 41054203 - 41054237
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  41054203 gcatatttgcagggaccaaaaccatattttagcct 41054237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Original strand, 45228885 - 45228919
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  45228885 gcatatttgcagggaccaaaaccatattttagcct 45228919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Original strand, 48192455 - 48192489
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  48192455 gcatatttgcagggaccaaaaccatattttagcct 48192489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Complemental strand, 48852477 - 48852443
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  48852477 gcatatttgcagggaccaaaaccatattttagcct 48852443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 1614591 - 1614558
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  1614591 catatttgcagggaccaaaaccatattttagcct 1614558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 253
Target Start/End: Complemental strand, 6589054 - 6589021
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcc 253  Q
    |||||||| |||||||||||||||||||||||||    
T  6589054 gcatatttgcagggaccaaaaccatattttagcc 6589021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 8144327 - 8144294
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  8144327 catatttgcagggaccaaaaccatattttagcct 8144294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 14543742 - 14543709
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  14543742 catatttgcagggaccaaaaccatattttagcct 14543709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 254
Target Start/End: Original strand, 14738968 - 14739005
Alignment:
Q  217 gaagcatatttacagggaccaaaaccatattttagcct 254  Q
    ||||||||||| ||||||| ||||||||||||||||||    
T  14738968 gaagcatatttgcagggactaaaaccatattttagcct 14739005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 253
Target Start/End: Original strand, 16853556 - 16853589
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcc 253  Q
    |||||||| |||||||||||||||||||||||||    
T  16853556 gcatatttgcagggaccaaaaccatattttagcc 16853589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 261
Target Start/End: Complemental strand, 20388307 - 20388266
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcctcaattta 261  Q
    |||||||| ||||||| |||||||||||||||||| ||||||    
T  20388307 gcatatttgcagggactaaaaccatattttagcctaaattta 20388266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 23399944 - 23399977
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  23399944 catatttgcagggaccaaaaccatattttagcct 23399977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 133
Target Start/End: Original strand, 24717383 - 24717412
Alignment:
Q  104 cctgcaaaatattttacttttgaaaatagt 133  Q
    ||||||||||||||||||||||||||||||    
T  24717383 cctgcaaaatattttacttttgaaaatagt 24717412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 25092192 - 25092159
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  25092192 catatttgcagggaccaaaaccatattttagcct 25092159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 25988417 - 25988384
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  25988417 catatttgcagggaccaaaaccatattttagcct 25988384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 253
Target Start/End: Complemental strand, 27037626 - 27037593
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcc 253  Q
    |||||||| |||||||||||||||||||||||||    
T  27037626 gcatatttgcagggaccaaaaccatattttagcc 27037593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 27458431 - 27458398
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  27458431 catatttgcagggaccaaaaccatattttagcct 27458398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 250
Target Start/End: Complemental strand, 34877806 - 34877777
Alignment:
Q  221 catatttacagggaccaaaaccatatttta 250  Q
    ||||||||||||||||||||||||||||||    
T  34877806 catatttacagggaccaaaaccatatttta 34877777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 35837956 - 35837923
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  35837956 catatttgcagggaccaaaaccatattttagcct 35837923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 35838305 - 35838338
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  35838305 catatttgcagggaccaaaaccatattttagcct 35838338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 38486510 - 38486477
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    |||||||||||||||||||| |||||||||||||    
T  38486510 catatttacagggaccaaaatcatattttagcct 38486477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 42254990 - 42254957
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    |||||||||||||||||||| |||||||||||||    
T  42254990 catatttacagggaccaaaagcatattttagcct 42254957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 46759690 - 46759657
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  46759690 catatttgcagggaccaaaaccatattttagcct 46759657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 221 - 253
Target Start/End: Complemental strand, 19005630 - 19005598
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcc 253  Q
    ||||||||||||||||||||| |||||||||||    
T  19005630 catatttacagggaccaaaactatattttagcc 19005598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 221 - 253
Target Start/End: Complemental strand, 28528937 - 28528905
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcc 253  Q
    |||||||||||| ||||||||||||||||||||    
T  28528937 catatttacaggaaccaaaaccatattttagcc 28528905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 222 - 254
Target Start/End: Complemental strand, 29198334 - 29198302
Alignment:
Q  222 atatttacagggaccaaaaccatattttagcct 254  Q
    |||||| ||||||||||||||||||||||||||    
T  29198334 atatttgcagggaccaaaaccatattttagcct 29198302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 222 - 254
Target Start/End: Complemental strand, 44568357 - 44568325
Alignment:
Q  222 atatttacagggaccaaaaccatattttagcct 254  Q
    |||||| ||||||||||||||||||||||||||    
T  44568357 atatttgcagggaccaaaaccatattttagcct 44568325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 104 - 151
Target Start/End: Complemental strand, 46829095 - 46829047
Alignment:
Q  104 cctgcaaaatattttactttt-gaaaatagttcctggaggtactatttt 151  Q
    ||||||||||||||||||||| ||||| |||||||||||| || |||||    
T  46829095 cctgcaaaatattttacttttggaaaaaagttcctggagggacgatttt 46829047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 104 - 151
Target Start/End: Original strand, 5103727 - 5103774
Alignment:
Q  104 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 151  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||||    
T  5103727 cctgcaaaatattttatttttgaaaatagttcctggagggactatttt 5103774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 106 - 151
Target Start/End: Original strand, 42596670 - 42596715
Alignment:
Q  106 tgcaaaatattttacttttgaaaatagttcctggaggtactatttt 151  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||    
T  42596670 tgcaaaatattttacttttgaaaatagtccctggagggactatttt 42596715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 148
Target Start/End: Complemental strand, 1286832 - 1286788
Alignment:
Q  104 cctgcaaaatattttacttttgaaaatagttcctggaggtactat 148  Q
    |||||||||||||||||||||||||||||| |||||||| |||||    
T  1286832 cctgcaaaatattttacttttgaaaatagtccctggagggactat 1286788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 151
Target Start/End: Original strand, 42553861 - 42553905
Alignment:
Q  107 gcaaaatattttacttttgaaaatagttcctggaggtactatttt 151  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||    
T  42553861 gcaaaatattttacttttgaaaatagttcttggagggactatttt 42553905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 217 - 254
Target Start/End: Complemental strand, 35876724 - 35876687
Alignment:
Q  217 gaagcatatttacagggaccaaaaccatattttagcct 254  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  35876724 gaagcatatttgcagggaccaaaaccatattttagcct 35876687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 151
Target Start/End: Complemental strand, 5103796 - 5103749
Alignment:
Q  104 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 151  Q
    |||||||||||||||||||||||||||||| |||  ||| ||||||||    
T  5103796 cctgcaaaatattttacttttgaaaatagtccctccaggaactatttt 5103749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 151
Target Start/End: Complemental strand, 5904154 - 5904111
Alignment:
Q  108 caaaatattttacttttgaaaatagttcctggaggtactatttt 151  Q
    |||||||||||||||||||||||||| ||| |||| ||||||||    
T  5904154 caaaatattttacttttgaaaatagtccctagagggactatttt 5904111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 259
Target Start/End: Original strand, 5917427 - 5917466
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcctcaatt 259  Q
    |||||||| |||||||||||||||||||||||||| ||||    
T  5917427 gcatatttgcagggaccaaaaccatattttagccttaatt 5917466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 151
Target Start/End: Original strand, 35609487 - 35609534
Alignment:
Q  104 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 151  Q
    |||||||||||||||||||||||||||||| | |||||| | ||||||    
T  35609487 cctgcaaaatattttacttttgaaaatagtccttggagggattatttt 35609534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Complemental strand, 1104891 - 1104857
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  1104891 gcatatttgcagggaccaaaaccatattttagcct 1104857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Original strand, 1105115 - 1105149
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  1105115 gcatatttgcagggaccaaaaccatattttagcct 1105149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Original strand, 1381578 - 1381612
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  1381578 gcatatttgcagggaccaaaaccatattttagcct 1381612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Complemental strand, 12144940 - 12144906
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||||||||||| ||||||||||||||||||    
T  12144940 gcatatttacagggacaaaaaccatattttagcct 12144906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Original strand, 19565798 - 19565832
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  19565798 gcatatttgcagggaccaaaaccatattttagcct 19565832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Original strand, 19685347 - 19685381
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  19685347 gcatatttgcagggaccaaaaccatattttagcct 19685381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Complemental strand, 20660981 - 20660947
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  20660981 gcatatttgcagggaccaaaaccatattttagcct 20660947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Original strand, 20986056 - 20986090
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  20986056 gcatatttgcagggaccaaaaccatattttagcct 20986090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Complemental strand, 24443413 - 24443379
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  24443413 gcatatttgcagggaccaaaaccatattttagcct 24443379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Original strand, 24443711 - 24443745
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  24443711 gcatatttgcagggaccaaaaccatattttagcct 24443745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Complemental strand, 28213406 - 28213372
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  28213406 gcatatttgcagggaccaaaaccatattttagcct 28213372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 221 - 263
Target Start/End: Original strand, 31037709 - 31037751
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcctcaatttaat 263  Q
    ||||||| ||||||| |||||||||||||||||| ||||||||    
T  31037709 catatttgcagggactaaaaccatattttagcctaaatttaat 31037751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 221 - 259
Target Start/End: Complemental strand, 32108840 - 32108802
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcctcaatt 259  Q
    ||||||| |||||||||||||||||||||||||| ||||    
T  32108840 catatttgcagggaccaaaaccatattttagcctaaatt 32108802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Original strand, 34125599 - 34125633
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||||||||||| ||||||||||||||||||    
T  34125599 gcatatttacagggactaaaaccatattttagcct 34125633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Complemental strand, 35928097 - 35928063
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  35928097 gcatatttgcagggaccaaaaccatattttagcct 35928063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Complemental strand, 38170547 - 38170513
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  38170547 gcatatttgcagggaccaaaaccatattttagcct 38170513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Complemental strand, 40764448 - 40764414
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  40764448 gcatatttgcagggaccaaaaccatattttagcct 40764414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 250
Target Start/End: Original strand, 1287013 - 1287042
Alignment:
Q  221 catatttacagggaccaaaaccatatttta 250  Q
    ||||||||||||||||||||||||||||||    
T  1287013 catatttacagggaccaaaaccatatttta 1287042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 1381279 - 1381246
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  1381279 catatttgcagggaccaaaaccatattttagcct 1381246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 4736510 - 4736543
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  4736510 catatttgcagggaccaaaaccatattttagcct 4736543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 5917158 - 5917125
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  5917158 catatttgcagggaccaaaaccatattttagcct 5917125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 253
Target Start/End: Complemental strand, 6912530 - 6912497
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcc 253  Q
    |||||||| |||||||||||||||||||||||||    
T  6912530 gcatatttgcagggaccaaaaccatattttagcc 6912497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 17070567 - 17070534
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  17070567 catatttgcagggaccaaaaccatattttagcct 17070534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 18258194 - 18258161
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  18258194 catatttgcagggaccaaaaccatattttagcct 18258161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 18258495 - 18258528
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  18258495 catatttgcagggaccaaaaccatattttagcct 18258528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 19565499 - 19565466
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  19565499 catatttgcagggaccaaaaccatattttagcct 19565466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 19685049 - 19685016
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  19685049 catatttgcagggaccaaaaccatattttagcct 19685016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 20690765 - 20690732
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  20690765 catatttgcagggaccaaaaccatattttagcct 20690732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 133
Target Start/End: Original strand, 20690947 - 20690976
Alignment:
Q  104 cctgcaaaatattttacttttgaaaatagt 133  Q
    ||||||||||||||||||||||||||||||    
T  20690947 cctgcaaaatattttacttttgaaaatagt 20690976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 254
Target Start/End: Original strand, 25779126 - 25779163
Alignment:
Q  217 gaagcatatttacagggaccaaaaccatattttagcct 254  Q
    ||||||||||| ||||||| ||||||||||||||||||    
T  25779126 gaagcatatttgcagggactaaaaccatattttagcct 25779163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 35877020 - 35877053
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  35877020 catatttgcagggaccaaaaccatattttagcct 35877053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 37271674 - 37271707
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  37271674 catatttgcagggaccaaaaccatattttagcct 37271707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 254
Target Start/End: Complemental strand, 38786195 - 38786158
Alignment:
Q  217 gaagcatatttacagggaccaaaaccatattttagcct 254  Q
    ||||||||||| ||||||| ||||||||||||||||||    
T  38786195 gaagcatatttgcagggactaaaaccatattttagcct 38786158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 254
Target Start/End: Original strand, 39379574 - 39379611
Alignment:
Q  217 gaagcatatttacagggaccaaaaccatattttagcct 254  Q
    ||||||||||| ||||||| ||||||||||||||||||    
T  39379574 gaagcatatttgcagggactaaaaccatattttagcct 39379611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 40029173 - 40029140
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||||||||||| ||||||||||||||||||    
T  40029173 catatttacagggactaaaaccatattttagcct 40029140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 221 - 253
Target Start/End: Complemental strand, 45170 - 45138
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcc 253  Q
    ||||||| |||||||||||||||||||||||||    
T  45170 catatttgcagggaccaaaaccatattttagcc 45138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 220 - 252
Target Start/End: Original strand, 2636960 - 2636992
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagc 252  Q
    |||||||| ||||||||||||||||||||||||    
T  2636960 gcatatttgcagggaccaaaaccatattttagc 2636992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 217 - 253
Target Start/End: Original strand, 20661275 - 20661311
Alignment:
Q  217 gaagcatatttacagggaccaaaaccatattttagcc 253  Q
    ||||||||||| || ||||||||||||||||||||||    
T  20661275 gaagcatatttgcacggaccaaaaccatattttagcc 20661311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 221 - 253
Target Start/End: Complemental strand, 30888192 - 30888160
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcc 253  Q
    ||||||| |||||||||||||||||||||||||    
T  30888192 catatttgcagggaccaaaaccatattttagcc 30888160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 105 - 133
Target Start/End: Original strand, 32888896 - 32888924
Alignment:
Q  105 ctgcaaaatattttacttttgaaaatagt 133  Q
    |||||||||||||||||||||||||||||    
T  32888896 ctgcaaaatattttacttttgaaaatagt 32888924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 221 - 253
Target Start/End: Original strand, 35928426 - 35928458
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcc 253  Q
    ||||||| |||||||||||||||||||||||||    
T  35928426 catatttgcagggaccaaaaccatattttagcc 35928458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 221 - 253
Target Start/End: Original strand, 36973678 - 36973710
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcc 253  Q
    ||||||| |||||||||||||||||||||||||    
T  36973678 catatttccagggaccaaaaccatattttagcc 36973710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 221 - 253
Target Start/End: Complemental strand, 38962838 - 38962806
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcc 253  Q
    ||||||||||||||| |||||||||||||||||    
T  38962838 catatttacagggactaaaaccatattttagcc 38962806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 220 - 264
Target Start/End: Original strand, 40764747 - 40764791
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcctcaatttaata 264  Q
    |||||||| |||||| |||||||||||||||||||  ||||||||    
T  40764747 gcatatttgcagggagcaaaaccatattttagcctttatttaata 40764791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 64)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 104 - 151
Target Start/End: Complemental strand, 54903261 - 54903214
Alignment:
Q  104 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 151  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||    
T  54903261 cctgcaaaatattttacttttgaaaatagtccctggagggactatttt 54903214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 104 - 141
Target Start/End: Complemental strand, 14594352 - 14594315
Alignment:
Q  104 cctgcaaaatattttacttttgaaaatagttcctggag 141  Q
    ||||||||||||||||||||||||||||||||||||||    
T  14594352 cctgcaaaatattttacttttgaaaatagttcctggag 14594315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 104 - 151
Target Start/End: Complemental strand, 12791759 - 12791712
Alignment:
Q  104 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 151  Q
    |||||||||||||||||||||||||||| | |||||||| ||||||||    
T  12791759 cctgcaaaatattttacttttgaaaatattccctggagggactatttt 12791712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 104 - 151
Target Start/End: Complemental strand, 50754072 - 50754025
Alignment:
Q  104 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 151  Q
    ||||||||||||||||||||| |||||||| |||||||| ||||||||    
T  50754072 cctgcaaaatattttacttttaaaaatagtccctggagggactatttt 50754025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 220 - 253
Target Start/End: Original strand, 8905201 - 8905234
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||||||    
T  8905201 gcatatttacagggaccaaaaccatattttagcc 8905234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 13764775 - 13764808
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||||||||||||||||||||||||||||||    
T  13764775 catatttacagggaccaaaaccatattttagcct 13764808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 151
Target Start/End: Complemental strand, 8905016 - 8904973
Alignment:
Q  108 caaaatattttacttttgaaaatagttcctggaggtactatttt 151  Q
    |||||||||||||||||||||||||| ||||||||  |||||||    
T  8905016 caaaatattttacttttgaaaatagtccctggaggggctatttt 8904973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 151
Target Start/End: Complemental strand, 23779144 - 23779097
Alignment:
Q  104 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 151  Q
    |||||||||||||||  ||||||||||||| |||||||| ||||||||    
T  23779144 cctgcaaaatattttgtttttgaaaatagtccctggagggactatttt 23779097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 219 - 254
Target Start/End: Complemental strand, 35119326 - 35119291
Alignment:
Q  219 agcatatttacagggaccaaaaccatattttagcct 254  Q
    ||||||||| ||||||||||||||||||||||||||    
T  35119326 agcatatttgcagggaccaaaaccatattttagcct 35119291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 151
Target Start/End: Complemental strand, 44925634 - 44925587
Alignment:
Q  104 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 151  Q
    ||||||||||||||||||||||||||||||  || |||| ||||||||    
T  44925634 cctgcaaaatattttacttttgaaaatagtctctagagggactatttt 44925587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 217 - 260
Target Start/End: Original strand, 45474560 - 45474603
Alignment:
Q  217 gaagcatatttacagggaccaaaaccatattttagcctcaattt 260  Q
    ||||||||||| ||||||| |||||||||||||||||| |||||    
T  45474560 gaagcatatttgcagggactaaaaccatattttagccttaattt 45474603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Complemental strand, 4211594 - 4211560
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  4211594 gcatatttgcagggaccaaaaccatattttagcct 4211560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 103 - 133
Target Start/End: Original strand, 5827868 - 5827898
Alignment:
Q  103 tcctgcaaaatattttacttttgaaaatagt 133  Q
    |||||||||||||||||||||||||||||||    
T  5827868 tcctgcaaaatattttacttttgaaaatagt 5827898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Original strand, 13530680 - 13530714
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  13530680 gcatatttgcagggaccaaaaccatattttagcct 13530714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Complemental strand, 14487835 - 14487801
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  14487835 gcatatttgcagggaccaaaaccatattttagcct 14487801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 221 - 259
Target Start/End: Original strand, 14488155 - 14488193
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcctcaatt 259  Q
    ||||||| |||||||||||||||||||||||||| ||||    
T  14488155 catatttgcagggaccaaaaccatattttagcctaaatt 14488193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Complemental strand, 24774078 - 24774044
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  24774078 gcatatttgcagggaccaaaaccatattttagcct 24774044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Complemental strand, 29499215 - 29499181
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  29499215 gcatatttgcagggaccaaaaccatattttagcct 29499181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Original strand, 30046759 - 30046793
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  30046759 gcatatttgcagggaccaaaaccatattttagcct 30046793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Original strand, 30061100 - 30061134
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  30061100 gcatatttgcagggaccaaaaccatattttagcct 30061134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Complemental strand, 35415332 - 35415298
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||||||||||| ||||||||||||||||||    
T  35415332 gcatatttacagggactaaaaccatattttagcct 35415298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Original strand, 41620223 - 41620257
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||||||||||| ||||||||||||||||||    
T  41620223 gcatatttacagggactaaaaccatattttagcct 41620257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Original strand, 43231356 - 43231390
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  43231356 gcatatttgcagggaccaaaaccatattttagcct 43231390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Complemental strand, 53915716 - 53915682
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  53915716 gcatatttgcagggaccaaaaccatattttagcct 53915682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 105 - 151
Target Start/End: Original strand, 54208543 - 54208589
Alignment:
Q  105 ctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 151  Q
    ||||||||||||||  |||||||||||||||||| ||| ||||||||    
T  54208543 ctgcaaaatattttgattttgaaaatagttcctgcagggactatttt 54208589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Original strand, 54903442 - 54903476
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  54903442 gcatatttgcagggaccaaaaccatattttagcct 54903476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 5827941 - 5827974
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  5827941 catatttgcagggaccaaaaccatattttagcct 5827974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 11693089 - 11693122
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  11693089 catatttgcagggaccaaaaccatattttagcct 11693122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 12152186 - 12152153
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  12152186 catatttgcagggaccaaaaccatattttagcct 12152153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 12152461 - 12152494
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  12152461 catatttgcagggaccaaaaccatattttagcct 12152494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 13631260 - 13631227
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  13631260 catatttgcagggaccaaaaccatattttagcct 13631227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 13631567 - 13631600
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  13631567 catatttgcagggaccaaaaccatattttagcct 13631600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 14594238 - 14594205
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  14594238 catatttgcagggaccaaaaccatattttagcct 14594205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 106 - 139
Target Start/End: Complemental strand, 14791649 - 14791616
Alignment:
Q  106 tgcaaaatattttacttttgaaaatagttcctgg 139  Q
    |||||||||||||||||||||||||||| |||||    
T  14791649 tgcaaaatattttacttttgaaaatagtccctgg 14791616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 14791774 - 14791807
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  14791774 catatttgcagggaccaaaaccatattttagcct 14791807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 133
Target Start/End: Original strand, 19903476 - 19903505
Alignment:
Q  104 cctgcaaaatattttacttttgaaaatagt 133  Q
    ||||||||||||||||||||||||||||||    
T  19903476 cctgcaaaatattttacttttgaaaatagt 19903505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 253
Target Start/End: Complemental strand, 23245264 - 23245231
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcc 253  Q
    |||||||| |||||||||||||||||||||||||    
T  23245264 gcatatttgcagggaccaaaaccatattttagcc 23245231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 25423956 - 25423923
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  25423956 catatttgcagggaccaaaaccatattttagcct 25423923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 25424280 - 25424313
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  25424280 catatttgcagggaccaaaaccatattttagcct 25424313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 29420505 - 29420538
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  29420505 catatttgcagggaccaaaaccatattttagcct 29420538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 254
Target Start/End: Complemental strand, 31560367 - 31560330
Alignment:
Q  217 gaagcatatttacagggaccaaaaccatattttagcct 254  Q
    ||||||||||| |||||| |||||||||||||||||||    
T  31560367 gaagcatatttgcagggatcaaaaccatattttagcct 31560330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 35464050 - 35464017
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  35464050 catatttgcagggaccaaaaccatattttagcct 35464017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 253
Target Start/End: Original strand, 35464349 - 35464382
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcc 253  Q
    |||||||| |||||||||||||||||||||||||    
T  35464349 gcatatttgcagggaccaaaaccatattttagcc 35464382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 253
Target Start/End: Original strand, 42848358 - 42848391
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcc 253  Q
    |||||||| |||||||||||||||||||||||||    
T  42848358 gcatatttgcagggaccaaaaccatattttagcc 42848391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 43231120 - 43231087
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  43231120 catatttgcagggaccaaaaccatattttagcct 43231087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 253
Target Start/End: Complemental strand, 46115447 - 46115414
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcc 253  Q
    |||||||| |||||||||||||||||||||||||    
T  46115447 gcatatttgcagggaccaaaaccatattttagcc 46115414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 253
Target Start/End: Complemental strand, 46128581 - 46128548
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcc 253  Q
    |||||||| |||||||||||||||||||||||||    
T  46128581 gcatatttgcagggaccaaaaccatattttagcc 46128548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 253
Target Start/End: Complemental strand, 46292425 - 46292392
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcc 253  Q
    |||||||| |||||||||||||||||||||||||    
T  46292425 gcatatttgcagggaccaaaaccatattttagcc 46292392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 133
Target Start/End: Complemental strand, 51738287 - 51738258
Alignment:
Q  104 cctgcaaaatattttacttttgaaaatagt 133  Q
    ||||||||||||||||||||||||||||||    
T  51738287 cctgcaaaatattttacttttgaaaatagt 51738258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 53916015 - 53916048
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  53916015 catatttgcagggaccaaaaccatattttagcct 53916048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 254
Target Start/End: Complemental strand, 55072425 - 55072388
Alignment:
Q  217 gaagcatatttacagggaccaaaaccatattttagcct 254  Q
    ||||||||||| ||||||| ||||||||||||||||||    
T  55072425 gaagcatatttgcagggactaaaaccatattttagcct 55072388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 221 - 253
Target Start/End: Complemental strand, 5827687 - 5827655
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcc 253  Q
    ||||||| |||||||||||||||||||||||||    
T  5827687 catatttgcagggaccaaaaccatattttagcc 5827655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 221 - 253
Target Start/End: Complemental strand, 13073791 - 13073759
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcc 253  Q
    ||||||| |||||||||||||||||||||||||    
T  13073791 catatttgcagggaccaaaaccatattttagcc 13073759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 104 - 132
Target Start/End: Original strand, 13073975 - 13074003
Alignment:
Q  104 cctgcaaaatattttacttttgaaaatag 132  Q
    |||||||||||||||||||||||||||||    
T  13073975 cctgcaaaatattttacttttgaaaatag 13074003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 222 - 254
Target Start/End: Original strand, 13074094 - 13074126
Alignment:
Q  222 atatttacagggaccaaaaccatattttagcct 254  Q
    |||||| ||||||||||||||||||||||||||    
T  13074094 atatttgcagggaccaaaaccatattttagcct 13074126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 221 - 253
Target Start/End: Complemental strand, 13764645 - 13764613
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcc 253  Q
    ||||||| |||||||||||||||||||||||||    
T  13764645 catatttgcagggaccaaaaccatattttagcc 13764613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 221 - 253
Target Start/End: Original strand, 19321827 - 19321859
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcc 253  Q
    ||||||| |||||||||||||||||||||||||    
T  19321827 catatttgcagggaccaaaaccatattttagcc 19321859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 221 - 261
Target Start/End: Original strand, 22099880 - 22099920
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcctcaattta 261  Q
    ||||||| ||||||| |||||||||||||||||| ||||||    
T  22099880 catatttgcagggactaaaaccatattttagccttaattta 22099920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 221 - 253
Target Start/End: Original strand, 25358508 - 25358540
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcc 253  Q
    |||||||||||||||||||| ||||||||||||    
T  25358508 catatttacagggaccaaaatcatattttagcc 25358540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 221 - 253
Target Start/End: Original strand, 26412552 - 26412584
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcc 253  Q
    ||||||| |||||||||||||||||||||||||    
T  26412552 catatttgcagggaccaaaaccatattttagcc 26412584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 305 - 349
Target Start/End: Original strand, 27433007 - 27433051
Alignment:
Q  305 tgtttgtgttgtttaagaaaaccttatcagaggttagtgtaattt 349  Q
    |||||||||| |||||||||||||||   ||||||||||||||||    
T  27433007 tgtttgtgttatttaagaaaaccttacgggaggttagtgtaattt 27433051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 221 - 253
Target Start/End: Original strand, 31560663 - 31560695
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcc 253  Q
    ||||||| |||||||||||||||||||||||||    
T  31560663 catatttgcagggaccaaaaccatattttagcc 31560695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 221 - 253
Target Start/End: Original strand, 42824059 - 42824091
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcc 253  Q
    ||||||| |||||||||||||||||||||||||    
T  42824059 catatttgcagggaccaaaaccatattttagcc 42824091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 221 - 253
Target Start/End: Original strand, 53308036 - 53308068
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcc 253  Q
    ||||||| |||||||||||||||||||||||||    
T  53308036 catatttgcagggaccaaaaccatattttagcc 53308068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 104 - 151
Target Start/End: Original strand, 29832004 - 29832051
Alignment:
Q  104 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 151  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||    
T  29832004 cctgcaaaatattttacttttgaaaatagtccctggagggactatttt 29832051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 104 - 151
Target Start/End: Complemental strand, 34963947 - 34963900
Alignment:
Q  104 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 151  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||||    
T  34963947 cctgcaaaatattttacttttgaaaatagttcttggagggactatttt 34963900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 104 - 149
Target Start/End: Original strand, 1138198 - 1138243
Alignment:
Q  104 cctgcaaaatattttacttttgaaaatagttcctggaggtactatt 149  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||    
T  1138198 cctgcaaaatattttacttttgaaaatagtccctggagggactatt 1138243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 104 - 151
Target Start/End: Original strand, 3172381 - 3172428
Alignment:
Q  104 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 151  Q
    |||||||||||||||||||||| ||||||| |||||||| ||||||||    
T  3172381 cctgcaaaatattttacttttgtaaatagtccctggagggactatttt 3172428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 104 - 151
Target Start/End: Complemental strand, 5164098 - 5164051
Alignment:
Q  104 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 151  Q
    |||||||||||||||||||||||||||||| ||| |||| ||||||||    
T  5164098 cctgcaaaatattttacttttgaaaatagtccctagagggactatttt 5164051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 104 - 151
Target Start/End: Complemental strand, 13215210 - 13215163
Alignment:
Q  104 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 151  Q
    |||||||||||||||||||||||||||||| | |||||| ||||||||    
T  13215210 cctgcaaaatattttacttttgaaaatagtccttggagggactatttt 13215163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 104 - 151
Target Start/End: Original strand, 37228894 - 37228941
Alignment:
Q  104 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 151  Q
    |||||||||||||||||||||||||||||| |||||| | ||||||||    
T  37228894 cctgcaaaatattttacttttgaaaatagtccctggatggactatttt 37228941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 217 - 254
Target Start/End: Complemental strand, 14003445 - 14003408
Alignment:
Q  217 gaagcatatttacagggaccaaaaccatattttagcct 254  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  14003445 gaagcatatttgcagggaccaaaaccatattttagcct 14003408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 217 - 254
Target Start/End: Complemental strand, 30215458 - 30215421
Alignment:
Q  217 gaagcatatttacagggaccaaaaccatattttagcct 254  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  30215458 gaagcatatttgcagggaccaaaaccatattttagcct 30215421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 217 - 254
Target Start/End: Original strand, 37911084 - 37911121
Alignment:
Q  217 gaagcatatttacagggaccaaaaccatattttagcct 254  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  37911084 gaagcatatttgcagggaccaaaaccatattttagcct 37911121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 217 - 254
Target Start/End: Complemental strand, 43671970 - 43671933
Alignment:
Q  217 gaagcatatttacagggaccaaaaccatattttagcct 254  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  43671970 gaagcatatttacagggacaaaaaccatattttagcct 43671933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 264
Target Start/End: Original strand, 4424153 - 4424196
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcctcaatttaata 264  Q
    ||||||| ||||||||||||||||||||||||||  ||||||||    
T  4424153 catatttgcagggaccaaaaccatattttagccttgatttaata 4424196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Original strand, 2481524 - 2481558
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  2481524 gcatatttgcagggaccaaaaccatattttagcct 2481558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Complemental strand, 4423928 - 4423894
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  4423928 gcatatttgcagggaccaaaaccatattttagcct 4423894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Original strand, 14003709 - 14003743
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  14003709 gcatatttgcagggaccaaaaccatattttagcct 14003743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Original strand, 15842790 - 15842824
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  15842790 gcatatttgcagggaccaaaaccatattttagcct 15842824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Complemental strand, 16523024 - 16522990
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  16523024 gcatatttgcagggaccaaaaccatattttagcct 16522990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Original strand, 16523292 - 16523326
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  16523292 gcatatttgcagggaccaaaaccatattttagcct 16523326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Original strand, 16673738 - 16673772
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  16673738 gcatatttgcagggaccaaaaccatattttagcct 16673772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Complemental strand, 18113122 - 18113088
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  18113122 gcatatttgcagggaccaaaaccatattttagcct 18113088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Complemental strand, 24358649 - 24358615
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  24358649 gcatatttgcagggaccaaaaccatattttagcct 24358615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Original strand, 25705416 - 25705450
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  25705416 gcatatttgcagggaccaaaaccatattttagcct 25705450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Original strand, 29859839 - 29859873
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  29859839 gcatatttgcagggaccaaaaccatattttagcct 29859873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Original strand, 31909445 - 31909479
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  31909445 gcatatttgcagggaccaaaaccatattttagcct 31909479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 106 - 151
Target Start/End: Complemental strand, 1295330 - 1295285
Alignment:
Q  106 tgcaaaatattttacttttgaaaatagttcctggaggtactatttt 151  Q
    |||||||||||||| ||||||||||||| ||| |||| ||||||||    
T  1295330 tgcaaaatattttaattttgaaaatagtccctagaggaactatttt 1295285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 253
Target Start/End: Complemental strand, 5334784 - 5334751
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcc 253  Q
    |||||||| |||||||||||||||||||||||||    
T  5334784 gcatatttgcagggaccaaaaccatattttagcc 5334751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 253
Target Start/End: Original strand, 5335007 - 5335040
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcc 253  Q
    |||||||| |||||||||||||||||||||||||    
T  5335007 gcatatttgcagggaccaaaaccatattttagcc 5335040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 13215092 - 13215059
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  13215092 catatttgcagggaccaaaaccatattttagcct 13215059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 16673443 - 16673410
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  16673443 catatttgcagggaccaaaaccatattttagcct 16673410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 20131349 - 20131316
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  20131349 catatttgcagggaccaaaaccatattttagcct 20131316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 253
Target Start/End: Original strand, 20131648 - 20131681
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcc 253  Q
    |||||||| |||||||||||||||||||||||||    
T  20131648 gcatatttgcagggaccaaaaccatattttagcc 20131681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 25705117 - 25705084
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  25705117 catatttgcagggaccaaaaccatattttagcct 25705084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 31644873 - 31644840
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  31644873 catatttgcagggaccaaaaccatattttagcct 31644840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 33576085 - 33576118
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  33576085 catatttgcagggaccaaaaccatattttagcct 33576118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 35155587 - 35155620
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  35155587 catattttcagggaccaaaaccatattttagcct 35155620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 250
Target Start/End: Original strand, 35686302 - 35686335
Alignment:
Q  217 gaagcatatttacagggaccaaaaccatatttta 250  Q
    |||||||||||||||||| |||||||||||||||    
T  35686302 gaagcatatttacagggatcaaaaccatatttta 35686335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 37228765 - 37228732
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  37228765 catatttgcagggaccaaaaccatattttagcct 37228732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 253
Target Start/End: Complemental strand, 40124999 - 40124966
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcc 253  Q
    |||||||| |||||||||||||||||||||||||    
T  40124999 gcatatttgcagggaccaaaaccatattttagcc 40124966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 41451869 - 41451836
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  41451869 catatttgcagggaccaaaaccatattttagcct 41451836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 44559094 - 44559061
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  44559094 catatttgcagggaccaaaaccatattttagcct 44559061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 221 - 253
Target Start/End: Original strand, 146658 - 146690
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcc 253  Q
    ||||||| |||||||||||||||||||||||||    
T  146658 catatttgcagggaccaaaaccatattttagcc 146690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 222 - 254
Target Start/End: Complemental strand, 10671661 - 10671629
Alignment:
Q  222 atatttacagggaccaaaaccatattttagcct 254  Q
    |||||| ||||||||||||||||||||||||||    
T  10671661 atatttgcagggaccaaaaccatattttagcct 10671629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 217 - 253
Target Start/End: Original strand, 18113418 - 18113454
Alignment:
Q  217 gaagcatatttacagggaccaaaaccatattttagcc 253  Q
    |||||||||||  ||||||||||||||||||||||||    
T  18113418 gaagcatatttgtagggaccaaaaccatattttagcc 18113454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 221 - 253
Target Start/End: Original strand, 19604946 - 19604978
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcc 253  Q
    |||||||||||||||||||| ||||||||||||    
T  19604946 catatttacagggaccaaaaacatattttagcc 19604978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 222 - 254
Target Start/End: Original strand, 30215840 - 30215872
Alignment:
Q  222 atatttacagggaccaaaaccatattttagcct 254  Q
    |||||| ||||||||||||||||||||||||||    
T  30215840 atatttgcagggaccaaaaccatattttagcct 30215872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 221 - 253
Target Start/End: Original strand, 34964127 - 34964159
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcc 253  Q
    ||||||| |||||||||||||||||||||||||    
T  34964127 catatttgcagggaccaaaaccatattttagcc 34964159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 218 - 254
Target Start/End: Original strand, 39367725 - 39367761
Alignment:
Q  218 aagcatatttacagggaccaaaaccatattttagcct 254  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  39367725 aagcatatttacagggatcaagaccatattttagcct 39367761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 217 - 253
Target Start/End: Original strand, 41791276 - 41791312
Alignment:
Q  217 gaagcatatttacagggaccaaaaccatattttagcc 253  Q
    ||||||||||| ||||||| |||||||||||||||||    
T  41791276 gaagcatatttgcagggactaaaaccatattttagcc 41791312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 221 - 253
Target Start/End: Complemental strand, 42695900 - 42695868
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcc 253  Q
    ||||||| |||||||||||||||||||||||||    
T  42695900 catatttgcagggaccaaaaccatattttagcc 42695868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 69)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 104 - 151
Target Start/End: Complemental strand, 19198734 - 19198687
Alignment:
Q  104 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 151  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||    
T  19198734 cctgcaaaatattttacttttgaaaatagtccctggagggactatttt 19198687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 104 - 151
Target Start/End: Original strand, 39025233 - 39025280
Alignment:
Q  104 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 151  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||    
T  39025233 cctgcaaaatattttacttttgaaaatagtccctggagggactatttt 39025280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 104 - 151
Target Start/End: Original strand, 24510157 - 24510204
Alignment:
Q  104 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 151  Q
    |||||||||||||||||||||||||||||| |||||||  ||||||||    
T  24510157 cctgcaaaatattttacttttgaaaatagtccctggagagactatttt 24510204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 104 - 151
Target Start/End: Original strand, 34002791 - 34002838
Alignment:
Q  104 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 151  Q
    |||||||||||||||||||||||||||||| | |||||| ||||||||    
T  34002791 cctgcaaaatattttacttttgaaaatagtccttggagggactatttt 34002838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 104 - 151
Target Start/End: Complemental strand, 49073841 - 49073794
Alignment:
Q  104 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 151  Q
    |||||||||||||||||||||||||||||| |||| ||| ||||||||    
T  49073841 cctgcaaaatattttacttttgaaaatagtccctgaagggactatttt 49073794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 15211543 - 15211510
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||||||||||||||||||||||||||||||    
T  15211543 catatttacagggaccaaaaccatattttagcct 15211510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 217 - 254
Target Start/End: Original strand, 49074017 - 49074054
Alignment:
Q  217 gaagcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||||||||| |||||||||||||||||||||||    
T  49074017 gaagcatatttacaaggaccaaaaccatattttagcct 49074054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 220 - 260
Target Start/End: Complemental strand, 31258372 - 31258332
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcctcaattt 260  Q
    |||||||||||||||| |||||||||||||||||| |||||    
T  31258372 gcatatttacagggactaaaaccatattttagccttaattt 31258332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 218 - 254
Target Start/End: Original strand, 42483236 - 42483272
Alignment:
Q  218 aagcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||||| ||||||||||||||||||||||||||    
T  42483236 aagcatatttgcagggaccaaaaccatattttagcct 42483272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 217 - 253
Target Start/End: Complemental strand, 45638616 - 45638580
Alignment:
Q  217 gaagcatatttacagggaccaaaaccatattttagcc 253  Q
    ||||||||||| |||||||||||||||||||||||||    
T  45638616 gaagcatatttgcagggaccaaaaccatattttagcc 45638580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 151
Target Start/End: Original strand, 12322820 - 12322867
Alignment:
Q  104 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 151  Q
    ||||||||||||||||||||||||| |||| |||  ||||||||||||    
T  12322820 cctgcaaaatattttacttttgaaattagtccctccaggtactatttt 12322867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 151
Target Start/End: Original strand, 12360818 - 12360865
Alignment:
Q  104 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 151  Q
    |||||||||||||||||||||||||||||| |||  ||| ||||||||    
T  12360818 cctgcaaaatattttacttttgaaaatagtccctccagggactatttt 12360865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 151
Target Start/End: Complemental strand, 12360887 - 12360840
Alignment:
Q  104 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 151  Q
    |||||||||||||||  ||||||||||||| |||||||| ||||||||    
T  12360887 cctgcaaaatattttgtttttgaaaatagtccctggagggactatttt 12360840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 267
Target Start/End: Original strand, 16060852 - 16060899
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcctcaatttaataaca 267  Q
    |||||||| |||||||||||||||||||||||||  |||| |||||||    
T  16060852 gcatatttgcagggaccaaaaccatattttagccaaaattaaataaca 16060899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 151
Target Start/End: Complemental strand, 32035577 - 32035530
Alignment:
Q  104 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 151  Q
    |||||||||||||||||||||||||||||| |  ||||| ||||||||    
T  32035577 cctgcaaaatattttacttttgaaaatagtcctaggagggactatttt 32035530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 151
Target Start/End: Original strand, 33234762 - 33234809
Alignment:
Q  104 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 151  Q
    |||||| |||||||||||| |||||||||| |||||||| ||||||||    
T  33234762 cctgcataatattttacttctgaaaatagtccctggagggactatttt 33234809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Original strand, 3753539 - 3753573
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||||||||||| ||||||||||||||||||    
T  3753539 gcatatttacagggactaaaaccatattttagcct 3753573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 104 - 138
Target Start/End: Original strand, 8364697 - 8364731
Alignment:
Q  104 cctgcaaaatattttacttttgaaaatagttcctg 138  Q
    |||||||||||||||||||||||||||||| ||||    
T  8364697 cctgcaaaatattttacttttgaaaatagtccctg 8364731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Complemental strand, 12360636 - 12360602
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  12360636 gcatatttgcagggaccaaaaccatattttagcct 12360602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Complemental strand, 15516615 - 15516581
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  15516615 gcatatttgcagggaccaaaaccatattttagcct 15516581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Original strand, 16026905 - 16026939
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  16026905 gcatatttgcagggaccaaaaccatattttagcct 16026939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Original strand, 24507810 - 24507844
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  24507810 gcatatttgcagggaccaaaaccatattttagcct 24507844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Original strand, 33045657 - 33045691
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  33045657 gcatatttgcagggaccaaaaccatattttagcct 33045691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Complemental strand, 33234579 - 33234545
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  33234579 gcatatttgcagggaccaaaaccatattttagcct 33234545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Original strand, 38164262 - 38164296
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  38164262 gcatatttgcagggaccaaaaccatattttagcct 38164296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 221 - 259
Target Start/End: Complemental strand, 45380304 - 45380266
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcctcaatt 259  Q
    ||||||| |||||||||||||||||||||||||| ||||    
T  45380304 catatttgcagggaccaaaaccatattttagcctaaatt 45380266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 217 - 251
Target Start/End: Complemental strand, 46183720 - 46183686
Alignment:
Q  217 gaagcatatttacagggaccaaaaccatattttag 251  Q
    ||||||||||| |||||||||||||||||||||||    
T  46183720 gaagcatatttgcagggaccaaaaccatattttag 46183686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Complemental strand, 47819265 - 47819231
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  47819265 gcatatttgcagggaccaaaaccatattttagcct 47819231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Original strand, 47819563 - 47819597
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  47819563 gcatatttgcagggaccaaaaccatattttagcct 47819597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 3247230 - 3247197
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  3247230 catatttgcagggaccaaaaccatattttagcct 3247197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 7867325 - 7867358
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  7867325 catatttgcagggaccaaaaccatattttagcct 7867358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 8140466 - 8140433
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  8140466 catatttgcagggaccaaaaccatattttagcct 8140433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 10631496 - 10631529
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  10631496 catatttgcagggaccaaaaccatattttagcct 10631529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 10887265 - 10887232
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  10887265 catatttgcagggaccaaaaccatattttagcct 10887232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 10887566 - 10887599
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  10887566 catatttgcagggaccaaaaccatattttagcct 10887599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 12360936 - 12360969
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  12360936 catatttgcagggaccaaaaccatattttagcct 12360969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 133
Target Start/End: Complemental strand, 15211644 - 15211615
Alignment:
Q  104 cctgcaaaatattttacttttgaaaatagt 133  Q
    ||||||||||||||||||||||||||||||    
T  15211644 cctgcaaaatattttacttttgaaaatagt 15211615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 15526330 - 15526363
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  15526330 catatttgcagggaccaaaaccatattttagcct 15526363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 257
Target Start/End: Original strand, 18302354 - 18302391
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcctcaa 257  Q
    |||||||| ||||||| |||||||||||||||||||||    
T  18302354 gcatatttgcagggactaaaaccatattttagcctcaa 18302391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 19720744 - 19720711
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  19720744 catatttgcagggaccaaaaccatattttagcct 19720711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 24611144 - 24611177
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    |||||||||||||||||||| |||||||||||||    
T  24611144 catatttacagggaccaaaaacatattttagcct 24611177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 253
Target Start/End: Complemental strand, 24653835 - 24653802
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcc 253  Q
    |||||||| |||||||||||||||||||||||||    
T  24653835 gcatatttgcagggaccaaaaccatattttagcc 24653802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 24654135 - 24654168
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  24654135 catatttgcagggaccaaaaccatattttagcct 24654168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 106 - 151
Target Start/End: Original strand, 29688152 - 29688197
Alignment:
Q  106 tgcaaaatattttacttttgaaaatagttcctggaggtactatttt 151  Q
    |||||||| ||||| ||||||||||||| |||||||| ||||||||    
T  29688152 tgcaaaattttttatttttgaaaatagtccctggagggactatttt 29688197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 30322961 - 30322928
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  30322961 catatttgcagggaccaaaaccatattttagcct 30322928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 32035756 - 32035789
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  32035756 catatttgcagggaccaaaaccatattttagcct 32035789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 253
Target Start/End: Complemental strand, 33000338 - 33000305
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcc 253  Q
    |||||||| |||||||||||||||||||||||||    
T  33000338 gcatatttgcagggaccaaaaccatattttagcc 33000305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 33000637 - 33000670
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  33000637 catatttgcagggaccaaaaccatattttagcct 33000670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 259
Target Start/End: Original strand, 35722313 - 35722350
Alignment:
Q  222 atatttacagggaccaaaaccatattttagcctcaatt 259  Q
    ||||||||||||||||||| ||||||||||||| ||||    
T  35722313 atatttacagggaccaaaaacatattttagcctaaatt 35722350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 36912885 - 36912852
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  36912885 catatttgcagggaccaaaaccatattttagcct 36912852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 253
Target Start/End: Original strand, 38151179 - 38151212
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcc 253  Q
    |||||||| |||||||||||||||||||||||||    
T  38151179 gcatatttgcagggaccaaaaccatattttagcc 38151212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 39747803 - 39747836
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  39747803 catatttgcagggaccaaaaccatattttagcct 39747836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 253
Target Start/End: Original strand, 40718441 - 40718474
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcc 253  Q
    |||||||| |||||||||||||||||||||||||    
T  40718441 gcatatttgcagggaccaaaaccatattttagcc 40718474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 253
Target Start/End: Complemental strand, 41738829 - 41738796
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcc 253  Q
    |||||||| |||||||||||||||||||||||||    
T  41738829 gcatatttgcagggaccaaaaccatattttagcc 41738796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 42483011 - 42482978
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  42483011 catatttgcagggaccaaaaccatattttagcct 42482978  T

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Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 45638862 - 45638895
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  45638862 catatttgcagggaccaaaaccatattttagcct 45638895  T

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Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 48588988 - 48589021
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    |||||||||||||||||||| |||||||||||||    
T  48588988 catatttacagggaccaaaaacatattttagcct 48589021  T

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Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 48594075 - 48594108
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    |||||||||||||||||||| |||||||||||||    
T  48594075 catatttacagggaccaaaaacatattttagcct 48594108  T

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Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 48598686 - 48598719
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    |||||||||||||||||||| |||||||||||||    
T  48598686 catatttacagggaccaaaaacatattttagcct 48598719  T

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Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 105 - 133
Target Start/End: Original strand, 4789524 - 4789552
Alignment:
Q  105 ctgcaaaatattttacttttgaaaatagt 133  Q
    |||||||||||||||||||||||||||||    
T  4789524 ctgcaaaatattttacttttgaaaatagt 4789552  T

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Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 221 - 253
Target Start/End: Complemental strand, 10631196 - 10631164
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcc 253  Q
    ||||||| |||||||||||||||||||||||||    
T  10631196 catatttgcagggaccaaaaccatattttagcc 10631164  T

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Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 221 - 253
Target Start/End: Original strand, 12322938 - 12322970
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcc 253  Q
    ||||||| |||||||||||||||||||||||||    
T  12322938 catatttgcagggaccaaaaccatattttagcc 12322970  T

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Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 221 - 253
Target Start/End: Original strand, 24510276 - 24510308
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcc 253  Q
    ||||||| |||||||||||||||||||||||||    
T  24510276 catatttgcagggaccaaaaccatattttagcc 24510308  T

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Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 221 - 253
Target Start/End: Complemental strand, 24977810 - 24977778
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcc 253  Q
    ||||||| |||||||||||||||||||||||||    
T  24977810 catatttgcagggaccaaaaccatattttagcc 24977778  T

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Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 217 - 253
Target Start/End: Complemental strand, 26191395 - 26191359
Alignment:
Q  217 gaagcatatttacagggaccaaaaccatattttagcc 253  Q
    ||||||||||| ||||||| |||||||||||||||||    
T  26191395 gaagcatatttgcagggactaaaaccatattttagcc 26191359  T

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Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 221 - 253
Target Start/End: Complemental strand, 31060819 - 31060787
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcc 253  Q
    ||||||| |||||||||||||||||||||||||    
T  31060819 catatttgcagggaccaaaaccatattttagcc 31060787  T

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Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 221 - 253
Target Start/End: Complemental strand, 35056562 - 35056530
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcc 253  Q
    ||||||| |||||||||||||||||||||||||    
T  35056562 catatttgcagggaccaaaaccatattttagcc 35056530  T

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Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 221 - 253
Target Start/End: Complemental strand, 40718142 - 40718110
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcc 253  Q
    ||||||| |||||||||||||||||||||||||    
T  40718142 catatttgcagggaccaaaaccatattttagcc 40718110  T

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Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 220 - 252
Target Start/End: Complemental strand, 44157728 - 44157696
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagc 252  Q
    |||||||| ||||||||||||||||||||||||    
T  44157728 gcatatttgcagggaccaaaaccatattttagc 44157696  T

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Target: scaffold0005 (Bit Score: 38; Significance: 0.000000000004; HSPs: 4)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 104 - 141
Target Start/End: Original strand, 223026 - 223063
Alignment:
Q  104 cctgcaaaatattttacttttgaaaatagttcctggag 141  Q
    ||||||||||||||||||||||||||||||||||||||    
T  223026 cctgcaaaatattttacttttgaaaatagttcctggag 223063  T

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Target: scaffold0005; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 147
Target Start/End: Original strand, 48082 - 48123
Alignment:
Q  106 tgcaaaatattttacttttgaaaatagttcctggaggtacta 147  Q
    |||||||||||||||||||||||||||| |||||||| ||||    
T  48082 tgcaaaatattttacttttgaaaatagtccctggagggacta 48123  T

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Target: scaffold0005; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 47957 - 47924
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  47957 catatttgcagggaccaaaaccatattttagcct 47924  T

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Target: scaffold0005; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 223140 - 223173
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcct 254  Q
    ||||||| ||||||||||||||||||||||||||    
T  223140 catatttgcagggaccaaaaccatattttagcct 223173  T

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Target: scaffold0078 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 218 - 254
Target Start/End: Complemental strand, 3787 - 3751
Alignment:
Q  218 aagcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||||| ||||||||||||||||||||||||||    
T  3787 aagcatatttgcagggaccaaaaccatattttagcct 3751  T

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Target: scaffold0024 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 220 - 260
Target Start/End: Original strand, 75731 - 75771
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcctcaattt 260  Q
    |||||||| |||||||||||||||||||||||||| |||||    
T  75731 gcatatttgcagggaccaaaaccatattttagcctaaattt 75771  T

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Target: scaffold0085 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 147
Target Start/End: Original strand, 34802 - 34845
Alignment:
Q  104 cctgcaaaatattttacttttgaaaatagttcctggaggtacta 147  Q
    |||||||||||||||||||||||||||||||  |||||| ||||    
T  34802 cctgcaaaatattttacttttgaaaatagtttttggagggacta 34845  T

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Target: scaffold0684 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0684
Description:

Target: scaffold0684; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Original strand, 2627 - 2661
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  2627 gcatatttgcagggaccaaaaccatattttagcct 2661  T

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Target: scaffold0026 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 254
Target Start/End: Original strand, 82673 - 82707
Alignment:
Q  220 gcatatttacagggaccaaaaccatattttagcct 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  82673 gcatatttgcagggaccaaaaccatattttagcct 82707  T

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Target: scaffold0007 (Bit Score: 30; Significance: 0.0000002; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 254
Target Start/End: Complemental strand, 2537 - 2500
Alignment:
Q  217 gaagcatatttacagggaccaaaaccatattttagcct 254  Q
    ||||||||||| |||||| |||||||||||||||||||    
T  2537 gaagcatatttgcagggatcaaaaccatattttagcct 2500  T

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Target: scaffold0007; HSP #2
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 105 - 133
Target Start/End: Original strand, 2718 - 2746
Alignment:
Q  105 ctgcaaaatattttacttttgaaaatagt 133  Q
    |||||||||||||||||||||||||||||    
T  2718 ctgcaaaatattttacttttgaaaatagt 2746  T

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Target: scaffold0007; HSP #3
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 221 - 253
Target Start/End: Original strand, 2851 - 2883
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcc 253  Q
    ||||||| |||||||||||||||||||||||||    
T  2851 catatttgcagggaccaaaaccatattttagcc 2883  T

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Target: scaffold0106 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 222 - 254
Target Start/End: Original strand, 30935 - 30967
Alignment:
Q  222 atatttacagggaccaaaaccatattttagcct 254  Q
    |||||| ||||||||||||||||||||||||||    
T  30935 atatttgcagggaccaaaaccatattttagcct 30967  T

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Target: scaffold0008 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 217 - 253
Target Start/End: Original strand, 44170 - 44206
Alignment:
Q  217 gaagcatatttacagggaccaaaaccatattttagcc 253  Q
    ||||||||||| ||||||||||| |||||||||||||    
T  44170 gaagcatatttgcagggaccaaagccatattttagcc 44206  T

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Target: scaffold0001 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 221 - 253
Target Start/End: Original strand, 148250 - 148282
Alignment:
Q  221 catatttacagggaccaaaaccatattttagcc 253  Q
    ||||||| |||||||||||||||||||||||||    
T  148250 catatttgcagggaccaaaaccatattttagcc 148282  T

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