View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8553_low_4 (Length: 415)

Name: NF8553_low_4
Description: NF8553
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8553_low_4
NF8553_low_4
[»] chr8 (45 HSPs)
chr8 (182-400)||(30106349-30106567)
chr8 (182-400)||(30110983-30111201)
chr8 (23-188)||(25186706-25186870)
chr8 (20-188)||(3895310-3895477)
chr8 (20-188)||(8056243-8056411)
chr8 (20-174)||(39705730-39705888)
chr8 (80-188)||(43901023-43901131)
chr8 (37-188)||(33435832-33435982)
chr8 (38-188)||(35561615-35561765)
chr8 (38-188)||(15010826-15010977)
chr8 (45-188)||(15968192-15968334)
chr8 (20-118)||(22188865-22188963)
chr8 (38-127)||(8559745-8559833)
chr8 (50-188)||(10989039-10989178)
chr8 (82-188)||(15968070-15968178)
chr8 (81-188)||(15968434-15968541)
chr8 (38-122)||(43599467-43599550)
chr8 (82-160)||(18313776-18313855)
chr8 (35-120)||(15967890-15967975)
chr8 (81-188)||(3895123-3895229)
chr8 (38-160)||(4195983-4196106)
chr8 (82-160)||(5720900-5720979)
chr8 (82-188)||(8559573-8559680)
chr8 (82-188)||(20760665-20760772)
chr8 (129-188)||(25186564-25186622)
chr8 (56-188)||(30065957-30066081)
chr8 (82-188)||(43599303-43599410)
chr8 (83-188)||(8056492-8056598)
chr8 (38-127)||(15857128-15857216)
chr8 (82-188)||(10989246-10989353)
chr8 (100-188)||(41456328-41456413)
chr8 (50-160)||(45122272-45122381)
chr8 (82-187)||(15011035-15011141)
chr8 (115-188)||(16051260-16051333)
chr8 (83-188)||(42228764-42228870)
chr8 (82-188)||(33435671-33435778)
chr8 (82-188)||(40902398-40902505)
chr8 (35-77)||(41456420-41456462)
chr8 (100-188)||(34248087-34248176)
chr8 (82-188)||(16454640-16454747)
chr8 (115-188)||(35561483-35561557)
chr8 (104-188)||(3183916-3184001)
chr8 (100-188)||(18905866-18905955)
chr8 (100-188)||(34248369-34248458)
chr8 (138-188)||(15967837-15967883)
[»] chr1 (58 HSPs)
chr1 (182-400)||(48641303-48641524)
chr1 (23-171)||(47086299-47086448)
chr1 (23-188)||(22826751-22826915)
chr1 (20-123)||(40073238-40073341)
chr1 (79-188)||(47377824-47377936)
chr1 (38-188)||(15391975-15392124)
chr1 (45-174)||(803486-803616)
chr1 (28-173)||(40073445-40073591)
chr1 (41-188)||(38870954-38871102)
chr1 (35-188)||(6237974-6238116)
chr1 (38-160)||(39648911-39649032)
chr1 (38-188)||(43361557-43361705)
chr1 (56-188)||(29413314-29413447)
chr1 (35-160)||(7171680-7171808)
chr1 (35-188)||(2997061-2997214)
chr1 (50-127)||(12314538-12314615)
chr1 (100-187)||(6238344-6238431)
chr1 (38-188)||(21428063-21428214)
chr1 (82-188)||(5222686-5222793)
chr1 (82-188)||(38871160-38871267)
chr1 (81-187)||(39649090-39649197)
chr1 (20-126)||(6238157-6238262)
chr1 (38-127)||(5324993-5325081)
chr1 (50-127)||(24382218-24382295)
chr1 (82-188)||(21538939-21539046)
chr1 (50-125)||(24382637-24382711)
chr1 (82-187)||(52846855-52846961)
chr1 (82-188)||(25799112-25799220)
chr1 (38-93)||(29272960-29273014)
chr1 (38-93)||(29273119-29273173)
chr1 (82-188)||(29273230-29273337)
chr1 (20-58)||(803355-803393)
chr1 (113-188)||(40196847-40196922)
chr1 (82-188)||(9380892-9380999)
chr1 (50-188)||(22892693-22892832)
chr1 (115-188)||(19863167-19863240)
chr1 (115-188)||(40073083-40073156)
chr1 (82-187)||(48558327-48558433)
chr1 (100-188)||(43361762-43361851)
chr1 (38-85)||(11590573-11590620)
chr1 (82-188)||(20428979-20429086)
chr1 (82-188)||(45395544-45395651)
chr1 (82-159)||(1233918-1233996)
chr1 (103-188)||(13959415-13959501)
chr1 (142-188)||(47086127-47086172)
chr1 (100-188)||(2697336-2697425)
chr1 (100-188)||(2997266-2997355)
chr1 (100-188)||(4022130-4022219)
chr1 (100-188)||(9381109-9381198)
chr1 (100-188)||(17419797-17419886)
chr1 (100-188)||(43423289-43423378)
chr1 (102-173)||(10017348-10017420)
chr1 (100-159)||(11590430-11590490)
chr1 (100-159)||(15391758-15391818)
chr1 (102-185)||(15391831-15391915)
chr1 (100-187)||(20735765-20735853)
chr1 (148-188)||(25799243-25799283)
chr1 (65-188)||(42844820-42844944)
[»] chr4 (60 HSPs)
chr4 (189-404)||(3640752-3640955)
chr4 (197-400)||(23871700-23871912)
chr4 (20-188)||(3640386-3640556)
chr4 (23-188)||(14945077-14945242)
chr4 (20-174)||(8304974-8305130)
chr4 (37-188)||(29113397-29113548)
chr4 (38-188)||(28245942-28246092)
chr4 (22-188)||(14115497-14115668)
chr4 (23-160)||(40716669-40716807)
chr4 (81-188)||(3640197-3640304)
chr4 (37-185)||(1922999-1923147)
chr4 (50-188)||(12016688-12016828)
chr4 (57-188)||(56511471-56511603)
chr4 (79-188)||(45684180-45684289)
chr4 (77-188)||(56511284-56511396)
chr4 (38-188)||(21498480-21498630)
chr4 (82-188)||(53863897-53864004)
chr4 (81-188)||(8559976-8560084)
chr4 (38-188)||(27634331-27634479)
chr4 (113-188)||(41743559-41743634)
chr4 (81-188)||(47491852-47491959)
chr4 (82-188)||(25753610-25753717)
chr4 (82-188)||(43943665-43943772)
chr4 (82-174)||(9758296-9758389)
chr4 (100-188)||(10390480-10390569)
chr4 (82-188)||(5488359-5488466)
chr4 (78-160)||(7892685-7892767)
chr4 (82-188)||(12016896-12017003)
chr4 (102-188)||(22865781-22865868)
chr4 (94-188)||(45684395-45684489)
chr4 (82-188)||(28395170-28395276)
chr4 (53-186)||(39110870-39111004)
chr4 (60-188)||(42561871-42562000)
chr4 (82-186)||(28497221-28497326)
chr4 (38-123)||(33629813-33629896)
chr4 (58-127)||(53559372-53559441)
chr4 (38-188)||(17076945-17077094)
chr4 (82-160)||(23350791-23350870)
chr4 (38-93)||(35399310-35399364)
chr4 (82-160)||(49380913-49380992)
chr4 (87-185)||(50307273-50307372)
chr4 (103-188)||(10390681-10390767)
chr4 (113-186)||(14115753-14115826)
chr4 (102-183)||(14944906-14944988)
chr4 (100-188)||(15665163-15665252)
chr4 (82-188)||(28245783-28245887)
chr4 (80-188)||(17077149-17077258)
chr4 (79-187)||(33797115-33797224)
chr4 (57-185)||(52827240-52827368)
chr4 (56-127)||(5066026-5066096)
chr4 (60-185)||(3055753-3055879)
chr4 (103-188)||(23018483-23018569)
chr4 (100-188)||(990557-990646)
chr4 (100-188)||(991214-991303)
chr4 (100-160)||(4905538-4905599)
chr4 (100-188)||(29669368-29669457)
chr4 (100-188)||(43972365-43972454)
chr4 (100-188)||(51469491-51469580)
chr4 (100-188)||(52214625-52214714)
chr4 (100-188)||(53740192-53740281)
[»] chr5 (53 HSPs)
chr5 (182-400)||(26689680-26689901)
chr5 (182-400)||(26959411-26959632)
chr5 (38-188)||(48109-48259)
chr5 (53-188)||(39268190-39268325)
chr5 (38-160)||(43490289-43490411)
chr5 (50-188)||(2908567-2908706)
chr5 (38-188)||(34457252-34457402)
chr5 (38-186)||(11632381-11632528)
chr5 (82-184)||(4563701-4563803)
chr5 (38-160)||(18914194-18914316)
chr5 (83-188)||(18873200-18873305)
chr5 (82-188)||(38376723-38376830)
chr5 (84-188)||(30330643-30330748)
chr5 (81-188)||(28358040-28358148)
chr5 (82-188)||(3762898-3763005)
chr5 (38-159)||(15510538-15510660)
chr5 (38-123)||(13413739-13413823)
chr5 (35-119)||(3763047-3763129)
chr5 (82-177)||(39268010-39268106)
chr5 (38-188)||(3015422-3015571)
chr5 (82-188)||(43490468-43490575)
chr5 (79-188)||(18107822-18107932)
chr5 (100-188)||(35526993-35527082)
chr5 (81-188)||(2908774-2908882)
chr5 (38-188)||(15287004-15287152)
chr5 (82-188)||(13413576-13413683)
chr5 (41-128)||(18107544-18107629)
chr5 (38-160)||(28156189-28156309)
chr5 (54-188)||(37656737-37656871)
chr5 (54-188)||(37781849-37781984)
chr5 (38-120)||(20720417-20720498)
chr5 (60-188)||(2716517-2716645)
chr5 (102-187)||(36307929-36308014)
chr5 (100-188)||(38131774-38131863)
chr5 (82-165)||(29008064-29008148)
chr5 (82-188)||(35527279-35527387)
chr5 (79-188)||(30592418-30592526)
chr5 (84-130)||(32501205-32501251)
chr5 (100-159)||(17135529-17135589)
chr5 (82-160)||(10668352-10668431)
chr5 (82-160)||(18914401-18914480)
chr5 (82-160)||(36878318-36878397)
chr5 (102-187)||(30870891-30870977)
chr5 (100-188)||(873701-873790)
chr5 (84-188)||(3015626-3015731)
chr5 (82-127)||(15286845-15286890)
chr5 (100-188)||(22196558-22196647)
chr5 (80-188)||(24125052-24125161)
chr5 (100-188)||(34457106-34457195)
chr5 (151-188)||(36882410-36882447)
chr5 (100-188)||(37995639-37995728)
chr5 (100-188)||(40169046-40169135)
chr5 (117-188)||(48316-48388)
[»] chr7 (55 HSPs)
chr7 (29-188)||(5266298-5266458)
chr7 (32-188)||(29646005-29646162)
chr7 (19-145)||(23390520-23390646)
chr7 (23-188)||(30768352-30768516)
chr7 (34-174)||(33834099-33834240)
chr7 (38-188)||(6782987-6783137)
chr7 (38-180)||(9378949-9379091)
chr7 (50-188)||(16565059-16565197)
chr7 (50-188)||(16600465-16600603)
chr7 (82-188)||(33833942-33834048)
chr7 (81-188)||(31357679-31357788)
chr7 (50-188)||(4258005-4258143)
chr7 (56-188)||(33855658-33855790)
chr7 (35-156)||(10903314-10903438)
chr7 (82-188)||(16564886-16564993)
chr7 (82-188)||(16600669-16600776)
chr7 (38-159)||(6751539-6751660)
chr7 (113-188)||(7832968-7833044)
chr7 (28-131)||(42068558-42068661)
chr7 (82-188)||(38948419-38948525)
chr7 (80-188)||(4258209-4258318)
chr7 (82-188)||(22841044-22841152)
chr7 (38-159)||(2232044-2232166)
chr7 (82-156)||(10903521-10903596)
chr7 (38-188)||(23396765-23396913)
chr7 (82-188)||(35866644-35866751)
chr7 (50-188)||(48113958-48114096)
chr7 (23-93)||(7832814-7832884)
chr7 (103-184)||(29645828-29645909)
chr7 (82-160)||(2179646-2179726)
chr7 (38-156)||(6813115-6813233)
chr7 (82-188)||(23396601-23396708)
chr7 (38-188)||(40703657-40703807)
chr7 (35-93)||(258580-258637)
chr7 (82-188)||(33855473-33855584)
chr7 (88-188)||(31374763-31374864)
chr7 (116-187)||(34590554-34590626)
chr7 (100-187)||(43167899-43167987)
chr7 (38-149)||(43366357-43366467)
chr7 (82-160)||(6782818-6782897)
chr7 (82-188)||(9378785-9378892)
chr7 (50-159)||(13310251-13310362)
chr7 (50-125)||(23821540-23821615)
chr7 (82-160)||(29252568-29252647)
chr7 (82-160)||(39808630-39808709)
chr7 (100-189)||(37272049-37272139)
chr7 (100-188)||(47855996-47856085)
chr7 (81-188)||(24377850-24377957)
chr7 (54-160)||(36492576-36492681)
chr7 (103-156)||(49040579-49040633)
chr7 (100-188)||(1661196-1661285)
chr7 (100-188)||(43384285-43384374)
chr7 (105-188)||(39808469-39808553)
chr7 (101-188)||(40137701-40137789)
chr7 (100-159)||(40703893-40703953)
[»] chr3 (74 HSPs)
chr3 (20-186)||(40926960-40927126)
chr3 (20-167)||(40926633-40926781)
chr3 (20-190)||(19984173-19984338)
chr3 (20-160)||(25578714-25578855)
chr3 (38-188)||(9264091-9264241)
chr3 (38-188)||(49477483-49477633)
chr3 (38-188)||(50692475-50692625)
chr3 (33-174)||(32515926-32516067)
chr3 (38-188)||(9264298-9264448)
chr3 (38-160)||(42258859-42258981)
chr3 (35-186)||(35015431-35015582)
chr3 (20-174)||(44367709-44367863)
chr3 (87-188)||(26926904-26927005)
chr3 (20-120)||(19984475-19984576)
chr3 (57-188)||(35011831-35011963)
chr3 (38-160)||(39956500-39956622)
chr3 (82-188)||(40926446-40926552)
chr3 (38-188)||(51642433-51642583)
chr3 (35-125)||(32034241-32034331)
chr3 (88-188)||(39269498-39269598)
chr3 (82-188)||(32034083-32034189)
chr3 (38-188)||(40230440-40230589)
chr3 (100-190)||(40926791-40926881)
chr3 (38-160)||(53639998-53640120)
chr3 (35-188)||(39268883-39269035)
chr3 (100-188)||(39018796-39018884)
chr3 (38-188)||(22407446-22407596)
chr3 (35-130)||(26927057-26927152)
chr3 (82-160)||(54495523-54495602)
chr3 (82-188)||(42637749-42637859)
chr3 (100-188)||(29763701-29763790)
chr3 (81-188)||(4191127-4191235)
chr3 (113-188)||(35011680-35011756)
chr3 (82-188)||(4029649-4029756)
chr3 (82-188)||(22339733-22339840)
chr3 (38-125)||(33798868-33798954)
chr3 (82-188)||(50692315-50692422)
chr3 (115-188)||(39269070-39269143)
chr3 (103-188)||(50203862-50203948)
chr3 (82-190)||(51338444-51338553)
chr3 (82-188)||(9264505-9264612)
chr3 (59-160)||(35358486-35358588)
chr3 (82-188)||(39078776-39078883)
chr3 (62-188)||(54591470-54591597)
chr3 (95-188)||(11414369-11414462)
chr3 (81-188)||(19820533-19820641)
chr3 (35-188)||(20737171-20737304)
chr3 (20-73)||(33799088-33799141)
chr3 (80-188)||(44367569-44367677)
chr3 (100-188)||(51642640-51642729)
chr3 (113-188)||(19984657-19984732)
chr3 (81-188)||(37058776-37058884)
chr3 (113-188)||(50338387-50338463)
chr3 (82-188)||(22407653-22407760)
chr3 (102-188)||(37039989-37040075)
chr3 (100-186)||(44461074-44461161)
chr3 (82-188)||(44145400-44145506)
chr3 (82-187)||(53640178-53640284)
chr3 (100-188)||(21832696-21832785)
chr3 (80-129)||(29369791-29369840)
chr3 (131-188)||(33799161-33799218)
chr3 (100-188)||(39956679-39956768)
chr3 (100-160)||(44145154-44145215)
chr3 (113-188)||(49477350-49477426)
chr3 (100-154)||(26915126-26915181)
chr3 (50-152)||(27177577-27177680)
chr3 (82-188)||(37223567-37223674)
chr3 (102-187)||(40230645-40230731)
chr3 (50-116)||(46412112-46412177)
chr3 (108-188)||(16078868-16078949)
chr3 (100-160)||(46509637-46509698)
chr3 (100-188)||(54369049-54369138)
chr3 (55-130)||(1715148-1715221)
chr3 (100-159)||(34992879-34992939)
[»] chr2 (43 HSPs)
chr2 (20-131)||(10485108-10485219)
chr2 (19-188)||(8044550-8044720)
chr2 (22-188)||(17264980-17265144)
chr2 (38-187)||(883607-883756)
chr2 (35-188)||(32667129-32667282)
chr2 (38-188)||(17727353-17727503)
chr2 (82-188)||(39386662-39386769)
chr2 (38-188)||(884006-884156)
chr2 (50-188)||(12432065-12432204)
chr2 (20-188)||(4721811-4721977)
chr2 (41-188)||(19859989-19860136)
chr2 (38-188)||(40009923-40010073)
chr2 (79-188)||(27545121-27545231)
chr2 (38-159)||(29695373-29695493)
chr2 (38-188)||(33985776-33985923)
chr2 (80-188)||(29676284-29676393)
chr2 (82-188)||(3435491-3435598)
chr2 (82-184)||(12431890-12431993)
chr2 (82-160)||(6986449-6986528)
chr2 (82-188)||(20998994-20999101)
chr2 (82-186)||(33985982-33986087)
chr2 (80-188)||(34775347-34775456)
chr2 (132-188)||(39108398-39108454)
chr2 (82-186)||(29676144-29676246)
chr2 (131-188)||(10485236-10485292)
chr2 (113-185)||(17265220-17265293)
chr2 (56-188)||(22447272-22447404)
chr2 (81-188)||(16006968-16007076)
chr2 (100-187)||(31761341-31761429)
chr2 (82-188)||(25621290-25621397)
chr2 (82-186)||(7257615-7257720)
chr2 (90-158)||(36264071-36264140)
chr2 (113-188)||(36264159-36264235)
chr2 (81-160)||(31761123-31761203)
chr2 (82-188)||(32666969-32667076)
chr2 (82-147)||(12419830-12419896)
chr2 (100-188)||(3976476-3976565)
chr2 (100-188)||(6183371-6183460)
chr2 (82-127)||(15518659-15518704)
chr2 (82-127)||(21734408-21734453)
chr2 (80-188)||(29684001-29684110)
chr2 (82-153)||(19859917-19859989)
chr2 (82-185)||(39108080-39108184)
[»] chr6 (38 HSPs)
chr6 (38-188)||(11313387-11313537)
chr6 (35-188)||(24558734-24558887)
chr6 (52-188)||(15101116-15101253)
chr6 (38-130)||(2923020-2923112)
chr6 (35-188)||(19712409-19712562)
chr6 (59-188)||(25998993-25999122)
chr6 (82-188)||(26098334-26098441)
chr6 (56-188)||(26098721-26098853)
chr6 (76-188)||(28149779-28149892)
chr6 (38-188)||(18494279-18494429)
chr6 (82-188)||(25998809-25998916)
chr6 (38-128)||(11316997-11317086)
chr6 (56-188)||(26098515-26098647)
chr6 (81-174)||(26394542-26394636)
chr6 (56-188)||(16590150-16590283)
chr6 (56-188)||(16605097-16605230)
chr6 (100-188)||(19291923-19292012)
chr6 (35-185)||(15102760-15102909)
chr6 (82-188)||(16877015-16877122)
chr6 (50-173)||(3713160-3713282)
chr6 (38-160)||(29742469-29742589)
chr6 (82-188)||(24558575-24558682)
chr6 (100-188)||(10733443-10733532)
chr6 (88-188)||(16876835-16876936)
chr6 (103-188)||(5269278-5269364)
chr6 (138-188)||(5592664-5592713)
chr6 (100-188)||(12134488-12134577)
chr6 (100-183)||(30539245-30539329)
chr6 (100-190)||(19054503-19054594)
chr6 (82-160)||(21110005-21110084)
chr6 (23-73)||(5592530-5592580)
chr6 (35-73)||(21109744-21109782)
chr6 (35-73)||(21109887-21109925)
chr6 (82-127)||(6623492-6623537)
chr6 (100-188)||(8144027-8144116)
chr6 (100-188)||(10418343-10418432)
chr6 (38-130)||(12124758-12124847)
chr6 (85-188)||(30539415-30539519)
[»] scaffold0434 (2 HSPs)
scaffold0434 (38-160)||(13462-13584)
scaffold0434 (82-188)||(13298-13405)
[»] scaffold1138 (2 HSPs)
scaffold1138 (35-188)||(1878-2032)
scaffold1138 (113-188)||(2084-2160)
[»] scaffold0029 (1 HSPs)
scaffold0029 (100-188)||(76862-76951)
[»] scaffold0989 (1 HSPs)
scaffold0989 (83-188)||(2952-3058)
[»] scaffold0054 (1 HSPs)
scaffold0054 (80-160)||(21296-21378)


Alignment Details
Target: chr8 (Bit Score: 195; Significance: 1e-106; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 182 - 400
Target Start/End: Original strand, 30106349 - 30106567
Alignment:
Q  182 gagttagtcatgtgaatttatataaaagcaatgtgcaacggttctgcacaatcatatatgataattcctaaaacatagagaagtttcctttatttgtgga 281  Q
    ||||| |||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  30106349 gagttggtcatgggaatttatataaaagcagtgtgcaacggttctgcacaatcacatatgataattcctaaaacatagagaagtttcctttatttgtgga 30106448  T
Q  282 tttaaacattctggttagttgactgatgtgagctgcaattacagctctttaatcctccaacggctctccaagtattgtgccattaatatgagatttcttt 381  Q
      ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30106449 gctaaacattctggttagttgactgatgtgagctgcaattacagctctttaatcctccaacggctctccaagtattgtgccattaatatgagatttcttt 30106548  T
Q  382 ttgctacagtcttgtgttt 400  Q
    |||||||||||||||||||    
T  30106549 ttgctacagtcttgtgttt 30106567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 182 - 400
Target Start/End: Original strand, 30110983 - 30111201
Alignment:
Q  182 gagttagtcatgtgaatttatataaaagcaatgtgcaacggttctgcacaatcatatatgataattcctaaaacatagagaagtttcctttatttgtgga 281  Q
    ||||| |||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  30110983 gagttggtcatgggaatttatataaaagcagtgtgcaacggttctgcacaatcacatatgataattcctaaaacatagagaagtttcctttatttgtgga 30111082  T
Q  282 tttaaacattctggttagttgactgatgtgagctgcaattacagctctttaatcctccaacggctctccaagtattgtgccattaatatgagatttcttt 381  Q
      ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30111083 gctaaacattctggttagttgactgatgtgagctgcaattacagctctttaatcctccaacggctctccaagtattgtgccattaatatgagatttcttt 30111182  T
Q  382 ttgctacagtcttgtgttt 400  Q
    |||||||||||||||||||    
T  30111183 ttgctacagtcttgtgttt 30111201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 23 - 188
Target Start/End: Original strand, 25186706 - 25186870
Alignment:
Q  23 tgggcgtgacggccgattcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagact 122  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||||||  |||||||||||| ||||| | |  |||||||||||| ||||||||||    
T  25186706 tgggcgtgacggccgattcaggcatcaaagcccaaagagtgctgggcgtga-cggagtgtattggaaaaaacctaagtcccacatcggatagataagact 25186804  T
Q  123 cttgat-aaagtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    |||||| |||||||| ||||||||||||||| ||| ||| |||||||| ||||||||| ||||||||    
T  25186805 cttgataaaagtttatatagaggagacaatcatcatcttatgaaccgg-tttttaaggttgagttag 25186870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 20 - 188
Target Start/End: Original strand, 3895310 - 3895477
Alignment:
Q  20 tgctgggcgtgacggccgattcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataag 119  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||| ||||||||| ||||| |||| | | |||||||| |||||||    
T  3895310 tgctgggcgtgacggccgattcacgcaccaaagcccaaagagtgttggtcgtgacgggggtgtattggaaaaaacccatgt-ctacatcggatagataag 3895408  T
Q  120 actcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    ||||||||||| | |||| |||||| || ||||||||||||| |||||| | ||||||||||||||||||    
T  3895409 actcttgataagaatttatatagagaaggcaatcctcaccttatgaacc-gatttttaaggatgagttag 3895477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 20 - 188
Target Start/End: Complemental strand, 8056411 - 8056243
Alignment:
Q  20 tgctgggcgtgacggccgattcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataag 119  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||||||||||  |  |||| ||| |||||| |||| |||||||||||| |||||||    
T  8056411 tgctgggcgtgacagccgattcacacaccaaagcccaaagagtgctgggcgtgacagaggtgtgttgagaaaaacccatgtcccacatcggaaagataag 8056312  T
Q  120 actcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    ||||||||||| |||||| ||||||||| |||||||||| || ||||||||  | |||||||||||||||    
T  8056311 actcttgataagagtttatatagaggaggcaatcctcacattatgaaccgg-ctcttaaggatgagttag 8056243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 20 - 174
Target Start/End: Complemental strand, 39705888 - 39705730
Alignment:
Q  20 tgctgggcgtgacggccgattcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataag 119  Q
    ||||||||||| ||||||||||| ||||||| |||||||||||||||| ||||||||| |||||||||||||||| ||| || ||||||||| | |||||    
T  39705888 tgctgggcgtggcggccgattcatgcaccaatgcccaaagagtgctggacgtgatgggggtgtattgggaaaaattcatgtctcacatcggataaataag 39705789  T
Q  120 actcttgataa-agtttaaatagaggagacaa---tcctcaccttctgaaccggttttt 174  Q
    ||||||||||| |||||||||| ||||| |||   |||||||||| |||||| ||||||    
T  39705788 actcttgataagagtttaaatacaggaggcaatattcctcaccttatgaaccagttttt 39705730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 80 - 188
Target Start/End: Complemental strand, 43901131 - 43901023
Alignment:
Q  80 tgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaag 178  Q
    |||||||||||||| |||| |||||||||||| |||||||||||||||||| |||||| ||||||||||||||||||||||| |||||||| ||||||||    
T  43901131 tgtattgggaaaaacccatgtcccacatcggatagataagactcttgataagagtttatatagaggagacaatcctcaccttatgaaccgg-tttttaag 43901033  T
Q  179 gatgagttag 188  Q
    ||||||||||    
T  43901032 gatgagttag 43901023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 37 - 188
Target Start/End: Original strand, 33435832 - 33435982
Alignment:
Q  37 gattcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agttt 135  Q
    |||||||||||||| |||||||||||||| || |||| ||| ||||||||||||||| |||  |||||||||||| |||||||||||||||||| |||||    
T  33435832 gattcacgcaccaa-gcccaaagagtgctaggtgtgagggg-gtgtattgggaaaaacccaagtcccacatcggatagataagactcttgataagagttt 33435929  T
Q  136 aaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    | ||| |||||||||||||||||||   | |||||||| ||| ||||||||||    
T  33435930 atataaaggagacaatcctcaccttacaagccggttttgtaaagatgagttag 33435982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 38 - 188
Target Start/End: Original strand, 35561615 - 35561765
Alignment:
Q  38 attcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agttta 136  Q
    ||||||||||||| |||||||||||||||||||||| ||| |||| |||||||||| |||  |||||||||||| |||||||| |||||| || ||||||    
T  35561615 attcacgcaccaa-gcccaaagagtgctgggcgtgaggggggtgtgttgggaaaaacccaagtcccacatcggatagataagattcttgagaagagttta 35561713  T
Q  137 aatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
     | ||||||| |||||||||||||     |||||||| ||||||||||||||    
T  35561714 taaagaggaggcaatcctcaccttgcatgccggttttgtaaggatgagttag 35561765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 38 - 188
Target Start/End: Complemental strand, 15010977 - 15010826
Alignment:
Q  38 attcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaa-tccatctcccacatcggacagataagactcttgataa-agttt 135  Q
    ||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||  |||  |||||||||||| ||| ||||||||||| || | |||    
T  15010977 attcacgcaccaa-gcccaaagagtgctgggcgtgaggggggtgtattgggaaaaaccccaagtcccacatcggatagacaagactcttgagaagaattt 15010879  T
Q  136 aaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    | | ||||||| |||||||||||||   | |||||||| ||||||||||||||    
T  15010878 ataaagaggaggcaatcctcaccttacaagccggttttataaggatgagttag 15010826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 45 - 188
Target Start/End: Complemental strand, 15968334 - 15968192
Alignment:
Q  45 caccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagag 143  Q
    |||||||||||||||||||| |||||||| ||| ||||||| || |||| |||| ||||||||| || |||| ||||| ||||||| |||||| ||||||    
T  15968334 caccaaagcccaaagagtgcagggcgtgacgggggtgtatttgg-aaaacccatgtcccacatcagatagattagacttttgataagagtttatatagag 15968236  T
Q  144 gagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    ||| ||| ||||||||| |||||||| ||||||||| ||||||||    
T  15968235 gaggcaaccctcaccttatgaaccgg-tttttaaggttgagttag 15968192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 20 - 118
Target Start/End: Original strand, 22188865 - 22188963
Alignment:
Q  20 tgctgggcgtgacggccgattcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataa 118  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||||||   | |||||||||||||||  ||| |||||||||||| ||||||    
T  22188865 tgctgggcgtgacggctgattcacacaccaaagcccaaagagtgctgggcgtgacatgggtgtattgggaaaaactcatgtcccacatcggatagataa 22188963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 38 - 127
Target Start/End: Complemental strand, 8559833 - 8559745
Alignment:
Q  38 attcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttga 127  Q
    ||||||||||||| |||||||||||||||||||||| ||| ||||||||||||||| |||  |||||||||||| |||||||||||||||    
T  8559833 attcacgcaccaa-gcccaaagagtgctgggcgtgaggggggtgtattgggaaaaacccaagtcccacatcggatagataagactcttga 8559745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 50 - 188
Target Start/End: Complemental strand, 10989178 - 10989039
Alignment:
Q  50 aagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagac 148  Q
    |||||||||||||||||||||||| ||| ||||||||| ||||| |||  ||||||||| |  ||| ||||||||||| || |||||| | ||||||| |    
T  10989178 aagcccaaagagtgctgggcgtgaggggggtgtattggaaaaaacccaagtcccacatcaggtagacaagactcttgagaagagtttataaagaggaggc 10989079  T
Q  149 aatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    ||||||||||||   | |||||||| ||||||||||||||    
T  10989078 aatcctcaccttacaagccggttttgtaaggatgagttag 10989039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 82 - 188
Target Start/End: Complemental strand, 15968178 - 15968070
Alignment:
Q  82 tattgggaaaaatccatctccc--acatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaag 178  Q
    |||||||||||| |||| ||||  ||||| ||  ||||||||||||||||| |||||| ||| ||||||||||||||||||| ||||||||| |||||||    
T  15968178 tattgggaaaaacccatgtcccccacatcagattgataagactcttgataagagtttatataaaggagacaatcctcaccttatgaaccggt-ttttaag 15968080  T
Q  179 gatgagttag 188  Q
    ||||||||||    
T  15968079 gatgagttag 15968070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 81 - 188
Target Start/End: Complemental strand, 15968541 - 15968434
Alignment:
Q  81 gtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaagg 179  Q
    |||||||||||||||||| |||||||||| | |||| ||||||||||||| ||||||  |||||||||||| ||||||||| | |||| | |||||||||    
T  15968541 gtattgggaaaaatccatgtcccacatcgtatagattagactcttgataagagtttatttagaggagacaaccctcaccttataaacc-gatttttaagg 15968443  T
Q  180 atgagttag 188  Q
     ||||||||    
T  15968442 ttgagttag 15968434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 38 - 122
Target Start/End: Original strand, 43599467 - 43599550
Alignment:
Q  38 attcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagact 122  Q
    ||||||||||||| ||| |||||||||||||||||| ||| ||||||||||||||| |||  |||||||||||| ||||||||||    
T  43599467 attcacgcaccaa-gccaaaagagtgctgggcgtgaggggggtgtattgggaaaaacccaagtcccacatcggatagataagact 43599550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 82 - 160
Target Start/End: Original strand, 18313776 - 18313855
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttgat-aaagtttaaatagaggagacaatcctcacctt 160  Q
    ||||||||||||||||  |||||||||||| |||||||||||||| | |||||||| ||||||||| |||||||||||||    
T  18313776 tattgggaaaaatccaagtcccacatcggatagataagactcttgttaaaagtttatatagaggaggcaatcctcacctt 18313855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 35 - 120
Target Start/End: Complemental strand, 15967975 - 15967890
Alignment:
Q  35 ccgattcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataaga 120  Q
    |||||||| ||||||||||||||||||||||||||| ||  |  ||| ||||||||||| |||| |||||||||||| ||||||||    
T  15967975 ccgattcatgcaccaaagcccaaagagtgctgggcgcgaccgaggtggattgggaaaaacccatgtcccacatcggatagataaga 15967890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 81 - 188
Target Start/End: Original strand, 3895123 - 3895229
Alignment:
Q  81 gtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaagg 179  Q
    |||||||||||| || || ||| | |||||| |||||||||||||||||| |||||| ||||||||| ||||||||||||| ||||| || |||| ||||    
T  3895123 gtattgggaaaactc-atgtcctatatcggatagataagactcttgataagagtttatatagaggaggcaatcctcaccttatgaactgg-ttttcaagg 3895220  T
Q  180 atgagttag 188  Q
    |||||||||    
T  3895221 atgagttag 3895229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 38 - 160
Target Start/End: Complemental strand, 4196106 - 4195983
Alignment:
Q  38 attcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatcc-atctcccacatcggacagataagactcttgataa-agttt 135  Q
    ||||||||||||| ||||||||| |||||||||||| ||| ||||||||||||||| || |   ||||||||||| ||| ||||||||||| || |||||    
T  4196106 attcacgcaccaa-gcccaaagaatgctgggcgtgaggggggtgtattgggaaaaaccccaaggcccacatcggatagacaagactcttgagaagagttt 4196008  T
Q  136 aaatagaggagacaatcctcacctt 160  Q
    |   ||||||| |||||||||||||    
T  4196007 atcaagaggaggcaatcctcacctt 4195983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 82 - 160
Target Start/End: Complemental strand, 5720979 - 5720900
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcacctt 160  Q
    ||||||||||||||||  |||||||||||| ||||||||||||||| || |||||| | ||||||| |||||||||||||    
T  5720979 tattgggaaaaatccaagtcccacatcggatagataagactcttgagaagagtttataaagaggaggcaatcctcacctt 5720900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 82 - 188
Target Start/End: Original strand, 8559573 - 8559680
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaagga 180  Q
    |||||||||||| |||  |||||||||||| ||||||||||||||| || ||| || | ||||||| |||||||||||||   | |||||||| ||||||    
T  8559573 tattgggaaaaacccaagtcccacatcggatagataagactcttgagaagagtatataaagaggaggcaatcctcaccttacaagccggttttgtaagga 8559672  T
Q  181 tgagttag 188  Q
    ||||||||    
T  8559673 tgagttag 8559680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 82 - 188
Target Start/End: Complemental strand, 20760772 - 20760665
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaagga 180  Q
    |||||||||||| |||  |||||||||||| ||| ||||||||||| || |||||| | ||| ||| |||||||||||||   |||||||||| ||||||    
T  20760772 tattgggaaaaacccaagtcccacatcggatagacaagactcttgagaagagtttataaagatgaggcaatcctcaccttacaaaccggttttgtaagga 20760673  T
Q  181 tgagttag 188  Q
    ||||||||    
T  20760672 tgagttag 20760665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 129 - 188
Target Start/End: Original strand, 25186564 - 25186622
Alignment:
Q  129 aaagtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    |||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  25186564 aaagtttatatagaggagacaatcctcaccttatgaaccgg-tttttaaggatgagttag 25186622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 56 - 188
Target Start/End: Original strand, 30065957 - 30066081
Alignment:
Q  56 aaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgataaagtttaaatagaggagacaatcctc 155  Q
    |||||||| ||||||||| ||| |||||||||||||||  ||  ||||||||| || |||||||||||||||||| |        | ||||||| |||||    
T  30065957 aaagagtgttgggcgtgacgggggtgtattgggaaaaactcaagtcccacatcagatagataagactcttgataagg--------gtggagacactcctc 30066048  T
Q  156 accttctgaaccggttttttaaggatgagttag 188  Q
    ||||| ||||| |||||| ||||||||||||||    
T  30066049 accttatgaactggttttgtaaggatgagttag 30066081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 82 - 188
Target Start/End: Original strand, 43599303 - 43599410
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaagga 180  Q
    ||||||||||||  ||  |||||||||||| ||||||||||||||| || |||||| | ||||||| |||||||||||||   | |||||||| ||||||    
T  43599303 tattgggaaaaactcaagtcccacatcggatagataagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaagga 43599402  T
Q  181 tgagttag 188  Q
    ||||||||    
T  43599403 tgagttag 43599410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 83 - 188
Target Start/End: Complemental strand, 8056598 - 8056492
Alignment:
Q  83 attgggaaaaatccatctcccacatcggacagataagactcttgataaa-gtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggat 181  Q
    ||||| |||||  ||| ||||||||| || ||||||||||||||||||  ||||| |||||||||||||||||||  ||| |||||| |||| |||| ||    
T  8056598 attggaaaaaacacatgtcccacatcagatagataagactcttgataagtgtttatatagaggagacaatcctcaatttcagaaccgattttgtaagaat 8056499  T
Q  182 gagttag 188  Q
    |||||||    
T  8056498 gagttag 8056492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 38 - 127
Target Start/End: Original strand, 15857128 - 15857216
Alignment:
Q  38 attcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttga 127  Q
    ||||||||||||| ||||||||| || ||||||||| | | |||||||||||||||  ||  |||||||||||| |||||||||||||||    
T  15857128 attcacgcaccaa-gcccaaagactgttgggcgtgaggtgggtgtattgggaaaaactcaagtcccacatcggatagataagactcttga 15857216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 82 - 188
Target Start/End: Complemental strand, 10989353 - 10989246
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaagga 180  Q
    |||||| ||||| |||  |||||||||||| ||| ||||||||||| || |||||| | ||||||| |||||||||||||   | |||||||| ||||||    
T  10989353 tattggaaaaaacccaagtcccacatcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaagga 10989254  T
Q  181 tgagttag 188  Q
    ||||||||    
T  10989253 tgagttag 10989246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 100 - 188
Target Start/End: Complemental strand, 41456413 - 41456328
Alignment:
Q  100 tcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    |||||||||||| ||||||   || |||||| |||||| ||||||||||||||||||||||  ||||||||| |||||||||||||||||    
T  41456413 tcccacatcggatagataa---tcctgataagagtttatatagaggagacaatcctcacctgatgaaccggt-ttttaaggatgagttag 41456328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 50 - 160
Target Start/End: Original strand, 45122272 - 45122381
Alignment:
Q  50 aagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagac 148  Q
    |||||||||||||| |||| |||| ||| ||||||||||||||| |||  ||||||||| || ||||||||||||||| || ||| || | ||| |||||    
T  45122272 aagcccaaagagtgttgggtgtgagggg-gtgtattgggaaaaacccaagtcccacatctgatagataagactcttgagaagagtatataaaga-gagac 45122369  T
Q  149 aatcctcacctt 160  Q
    ||||||||||||    
T  45122370 aatcctcacctt 45122381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 82 - 187
Target Start/End: Complemental strand, 15011141 - 15011035
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaagga 180  Q
    |||||| ||||| |||  |||||||||||| ||| ||||||||||| || |||||| | ||||||| |||||||||||||   | |||||||| ||||||    
T  15011141 tattggaaaaaacccaagtcccacatcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaagga 15011042  T
Q  181 tgagtta 187  Q
    |||||||    
T  15011041 tgagtta 15011035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 115 - 188
Target Start/End: Complemental strand, 16051333 - 16051260
Alignment:
Q  115 ataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    |||||||||||||||| |||||| |||||||||||| |||||||||| ||||  || ||||||||||||||||||    
T  16051333 ataagactcttgataagagtttatatagaggagacactcctcaccttatgaattgg-tttttaaggatgagttag 16051260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 83 - 188
Target Start/End: Original strand, 42228764 - 42228870
Alignment:
Q  83 attgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggat 181  Q
    ||||||||||||| |  |||||||||||| ||| ||||||||||| || |||||| | ||||||| |||||||||||||   | ||| |||| |||||||    
T  42228764 attgggaaaaatctaagtcccacatcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccgattttgtaaggat 42228863  T
Q  182 gagttag 188  Q
    |||||||    
T  42228864 gagttag 42228870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 82 - 188
Target Start/End: Original strand, 33435671 - 33435778
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaagga 180  Q
    ||||||||||||  ||  || ||||||||| |||||| ||||||||||| |||||| ||| ||||||||||||||| |||   |  ||||||| ||||||    
T  33435671 tattgggaaaaactcaagtctcacatcggatagataaaactcttgataagagtttatataaaggagacaatcctcatcttacaagtcggttttgtaagga 33435770  T
Q  181 tgagttag 188  Q
    ||||||||    
T  33435771 tgagttag 33435778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 82 - 188
Target Start/End: Complemental strand, 40902505 - 40902398
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaagga 180  Q
    |||||||||||| |||  | |||||||||| ||| ||||||||||| || |||||| | ||||||| |||||||||||||   | |||||||| ||||||    
T  40902505 tattgggaaaaacccaagttccacatcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaagga 40902406  T
Q  181 tgagttag 188  Q
    | ||||||    
T  40902405 taagttag 40902398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 35 - 77
Target Start/End: Complemental strand, 41456462 - 41456420
Alignment:
Q  35 ccgattcacgcaccaaagcccaaagagtgctgggcgtgatggg 77  Q
    ||||||||||||||||||||||||||||| ||||||||| |||    
T  41456462 ccgattcacgcaccaaagcccaaagagtgttgggcgtgacggg 41456420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 100 - 188
Target Start/End: Original strand, 34248087 - 34248176
Alignment:
Q  100 tcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    |||||||||||  ||||| |||||||||||| |||||| | ||||||| || ||||||||||   | |||||||| ||||||||||||||    
T  34248087 tcccacatcggttagataggactcttgataagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttag 34248176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 82 - 188
Target Start/End: Complemental strand, 16454747 - 16454640
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaagga 180  Q
    |||||| ||||| |||  || ||||||||| ||||||||||||| | || ||| || | ||||||| |||||||||||||   | |||||||| ||||||    
T  16454747 tattggaaaaaaaccaagtctcacatcggatagataagactcttaagaagagtatataaagaggaggcaatcctcaccttacaagccggttttgtaagga 16454648  T
Q  181 tgagttag 188  Q
    ||||||||    
T  16454647 tgagttag 16454640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 115 - 188
Target Start/End: Original strand, 35561483 - 35561557
Alignment:
Q  115 ataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    ||||||||||||| || |||||| | |||||||  |||||||||||| | | |||||||| ||||||||||||||    
T  35561483 ataagactcttgagaagagtttataaagaggaggtaatcctcaccttgtaagccggttttgtaaggatgagttag 35561557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 188
Target Start/End: Complemental strand, 3184001 - 3183916
Alignment:
Q  104 acatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    |||||||| ||||| ||||||||| || |||||| | ||||||| |||||||||||||   | |||||||| ||| ||||||||||    
T  3184001 acatcggatagataggactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaacgatgagttag 3183916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 188
Target Start/End: Original strand, 18905866 - 18905955
Alignment:
Q  100 tcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    |||||||||||| |||||  |||||||| || |||||| | ||||||| || ||||||||||   | |||||||| ||||||||||||||    
T  18905866 tcccacatcggatagatagcactcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttag 18905955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 188
Target Start/End: Original strand, 34248369 - 34248458
Alignment:
Q  100 tcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    |||||||| ||  ||||| |||||||||||| |||||| | ||||||| || ||||||||||   | |||||||| ||||||||||||||    
T  34248369 tcccacattggttagataggactcttgataagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttag 34248458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 138 - 188
Target Start/End: Complemental strand, 15967883 - 15967837
Alignment:
Q  138 atagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    ||||||||||||||||||||   ||||||||| ||||||||||||||||||    
T  15967883 atagaggagacaatcctcac---ctgaaccgg-tttttaaggatgagttag 15967837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 168; Significance: 6e-90; HSPs: 58)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 182 - 400
Target Start/End: Original strand, 48641303 - 48641524
Alignment:
Q  182 gagttagtcatgtgaatttatataaaagcaatgtgcaacggttctgcacaatcatatatgataattcctaaaacatagagaagtt---tcctttatttgt 278  Q
    ||||| |||||| |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||||||||   ||||||||||||    
T  48641303 gagttggtcatgggaatttatataaaagcaatgtgcaacggttctacacaatcacatatgataattcctaaaatatagagaagttgtttcctttatttgt 48641402  T
Q  279 ggatttaaacattctggttagttgactgatgtgagctgcaattacagctctttaatcctccaacggctctccaagtattgtgccattaatatgagatttc 378  Q
    |||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  48641403 ggagctaaacattctggttagttgactgatgtgagctgcaattacagctctttaatcctccaacgactctccaagtattgtgccattaataagagatttc 48641502  T
Q  379 tttttgctacagtcttgtgttt 400  Q
    |||||| |||||||||||||||    
T  48641503 tttttgatacagtcttgtgttt 48641524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 23 - 171
Target Start/End: Complemental strand, 47086448 - 47086299
Alignment:
Q  23 tgggcgtgacggccgattcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagact 122  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||| ||||||||| |||||||||| ||||||||| || ||||||||||    
T  47086448 tgggcgtgacggccgattcgcgcaccaaagcccaaagagtgttgggcgtgacgggggtgtattggaaaaaatccatgtcccacatcagatagataagact 47086349  T
Q  123 cttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggtt 171  Q
    |||||||| |||||| ||| | |||||| |||||||||| ||||||||||    
T  47086348 cttgataagagtttatatacatgagacactcctcaccttatgaaccggtt 47086299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 23 - 188
Target Start/End: Complemental strand, 22826915 - 22826751
Alignment:
Q  23 tgggcgtgacggccgattcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattggg-aaaaatccatctcccacatcggacagataagac 121  Q
    ||||||||||| ||||||| ||||||||||||||||||||| |||||||||   ||| |||||||| ||||| |||| |||||||||||| |||||||||    
T  22826915 tgggcgtgacgaccgattcgcgcaccaaagcccaaagagtgttgggcgtga--cgagggtattgggaaaaaacccatgtcccacatcggatagataagac 22826818  T
Q  122 tcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    ||||||||| |||||| ||||||||||||||||||||||| |||||||| ||||||||||| ||||||    
T  22826817 tcttgataagagtttatatagaggagacaatcctcaccttatgaaccgg-tttttaaggatcagttag 22826751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 20 - 123
Target Start/End: Original strand, 40073238 - 40073341
Alignment:
Q  20 tgctgggcgtgacggccgattcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataag 119  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||| |||||||||||||||||||| |||||||||||| | |||||    
T  40073238 tgctgggcgtgacagccgattcacgcaccaaagcccaaagagtgctggacgtgacgggggtgtattgggaaaaatccatgtcccacatcggatatataag 40073337  T
Q  120 actc 123  Q
    ||||    
T  40073338 actc 40073341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 79 - 188
Target Start/End: Original strand, 47377824 - 47377936
Alignment:
Q  79 gtgtattgggaaaaatccatctcccacatcggacagataagactcttgataa----agtttaaatagaggagacaatcctcaccttctgaaccggttttt 174  Q
    |||||||||||||||  ||| |||||||||||| ||||||||||||||||||    |||||| ||||||||||||||||||||||| |||||||| ||||    
T  47377824 gtgtattgggaaaaactcatgtcccacatcggatagataagactcttgataataatagtttatatagaggagacaatcctcaccttatgaaccgg-tttt 47377922  T
Q  175 taaggatgagttag 188  Q
    ||||||||| ||||    
T  47377923 taaggatgaattag 47377936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 38 - 188
Target Start/End: Original strand, 15391975 - 15392124
Alignment:
Q  38 attcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agttta 136  Q
    ||||||||||||| |||||||||||| ||||||||| ||| ||||||||||||||| |||  |||||||||||| ||||||||||||||| || ||| ||    
T  15391975 attcacgcaccaa-gcccaaagagtgttgggcgtgagggg-gtgtattgggaaaaacccaagtcccacatcggatagataagactcttgagaagagtata 15392072  T
Q  137 aatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
     | ||||||| |||||||||| ||   | |||||||| ||||||||||||||    
T  15392073 taaagaggaggcaatcctcactttacaagccggttttgtaaggatgagttag 15392124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 45 - 174
Target Start/End: Complemental strand, 803616 - 803486
Alignment:
Q  45 caccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgata-aagtttaaatagag 143  Q
    ||||||| || ||||||||||||| |||| ||||||||||||| |||||  ||| ||||||||| || | |||||| |||| ||| ||||||| ||||||    
T  803616 caccaaaacctaaagagtgctgggtgtgacgggagtgtattggaaaaaactcatgtcccacatcagatatataagattcttaatagaagtttatatagag 803517  T
Q  144 gagacaatcctcaccttctgaaccggttttt 174  Q
    ||||||||||||| ||| |||||||||||||    
T  803516 gagacaatcctcatcttatgaaccggttttt 803486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 28 - 173
Target Start/End: Original strand, 40073445 - 40073591
Alignment:
Q  28 gtgacggccgattcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttga 127  Q
    ||||||||| ||||||||||||||| |||||||||||| || |||| ||  ||||||||||||||| ||||  | || ||| || |||| ||||||||      
T  40073445 gtgacggccaattcacgcaccaaaggccaaagagtgctaggtgtgacggaggtgtattgggaaaaacccatgcctcatatcagatagattagactcttag 40073544  T
Q  128 taa-agtttaaatagaggagacaatcctcaccttctgaaccggtttt 173  Q
    ||| |||||| |||||||||||||||| |||||| ||||||||||||    
T  40073545 taagagtttatatagaggagacaatccccaccttatgaaccggtttt 40073591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 41 - 188
Target Start/End: Complemental strand, 38871102 - 38870954
Alignment:
Q  41 cacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaa-tccatctcccacatcggacagataagactcttgat-aaagtttaaa 138  Q
    |||||||||| |||||||||||||||| ||||| ||| |||||||||||||||  |||  ||||||||| ||  ||||||||||||||| |||||||| |    
T  38871102 cacgcaccaa-gcccaaagagtgctggacgtgaggggggtgtattgggaaaaaccccaagtcccacatcagatcgataagactcttgataaaagtttata 38871004  T
Q  139 tagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
     || |||| || ||||||||||  ||||||||||| ||||||||||||||    
T  38871003 aagtggaggcactcctcaccttaagaaccggttttgtaaggatgagttag 38870954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 35 - 188
Target Start/End: Complemental strand, 6238116 - 6237974
Alignment:
Q  35 ccgattcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agt 133  Q
    |||||||||||||||| |||||||||||| ||||||||| ||| |||||||||||||| || || |||||||||||| ||       ||||||||| |||    
T  6238116 ccgattcacgcaccaa-gcccaaagagtg-tgggcgtgacggg-gtgtattgggaaaactc-atgtcccacatcggatag-------tcttgataagagt 6238028  T
Q  134 ttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    ||| ||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  6238027 ttatatagaggagacaatcctcaccttatgaaccggt-ttttaaggatgagttag 6237974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 38 - 160
Target Start/End: Complemental strand, 39649032 - 39648911
Alignment:
Q  38 attcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agttta 136  Q
    ||||||||||||| |||||||||||| ||||||||| ||| ||||||||||||||| |||  ||||||||| || ||||||||||||||| || ||||||    
T  39649032 attcacgcaccaa-gcccaaagagtgatgggcgtgaggggggtgtattgggaaaaacccaagtcccacatc-gatagataagactcttgagaagagttta 39648935  T
Q  137 aatagaggagacaatcctcacctt 160  Q
     | ||||||| |||||||||||||    
T  39648934 taaagaggaggcaatcctcacctt 39648911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 38 - 188
Target Start/End: Complemental strand, 43361705 - 43361557
Alignment:
Q  38 attcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agttta 136  Q
    ||||||||||||| | |||||||||||||||||||| ||| ||||||||||||||  |||  |||||||||||| ||| ||||||||||| || ||||||    
T  43361705 attcacgcaccaa-gtccaaagagtgctgggcgtgagggg-gtgtattgggaaaac-ccaagtcccacatcggatagacaagactcttgagaagagttta 43361609  T
Q  137 aatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
     | ||||||| |||||||||||||   | |||||||| ||||||||||||||    
T  43361608 taaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttag 43361557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 56 - 188
Target Start/End: Original strand, 29413314 - 29413447
Alignment:
Q  56 aaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcct 154  Q
    |||||||||||| ||||| ||| ||||||||||||||| |||  ||| || ||||  |||||||||||||||||| |||||| | ||||||| || ||||    
T  29413314 aaagagtgctggacgtgaggggggtgtattgggaaaaacccaagtcctacttcgggtagataagactcttgataagagtttataaagaggaggcactcct 29413413  T
Q  155 caccttctgaaccggttttttaaggatgagttag 188  Q
    |||||| ||| || ||||| ||||||||||||||    
T  29413414 caccttatgagccagttttgtaaggatgagttag 29413447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 35 - 160
Target Start/End: Original strand, 7171680 - 7171808
Alignment:
Q  35 ccgattcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattggg---aaaaatccatctcccacatcggacagataagactcttgat-aa 130  Q
    ||||||||||||||||| ||||||||||| |||||||||  || ||||||||||   |||||||||| ||||||||  || | |||||||||||| | ||    
T  7171680 ccgattcacgcaccaaa-cccaaagagtgttgggcgtgacaggggtgtattgggaaaaaaaatccatgtcccacataagatatataagactcttggtaaa 7171778  T
Q  131 agtttaaatagaggagacaatcctcacctt 160  Q
    |||||| |||||||||||||| ||||||||    
T  7171779 agtttatatagaggagacaattctcacctt 7171808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 35 - 188
Target Start/End: Complemental strand, 2997214 - 2997061
Alignment:
Q  35 ccgattcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agt 133  Q
    |||||||||||||||| |||||||||||||||||||||| ||  ||||||||||||||| | |  |||||||||||| |||||| |||||||| || |||    
T  2997214 ccgattcacgcaccaa-gcccaaagagtgctgggcgtgacggaggtgtattgggaaaaacctaagtcccacatcggatagataaaactcttgagaagagt 2997116  T
Q  134 ttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
     || | |||||||  ||| |||||||    | |||||||| ||||||||||||||    
T  2997115 atataaagaggaggtaatactcacctcacaagccggttttgtaaggatgagttag 2997061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 50 - 127
Target Start/End: Original strand, 12314538 - 12314615
Alignment:
Q  50 aagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttga 127  Q
    |||||||||||||| ||||||||| ||| |||||||||||||||||||  |||||||||||| ||| |||||||||||    
T  12314538 aagcccaaagagtgttgggcgtgaggggggtgtattgggaaaaatccaagtcccacatcggatagacaagactcttga 12314615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 100 - 187
Target Start/End: Complemental strand, 6238431 - 6238344
Alignment:
Q  100 tcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagtta 187  Q
    ||||||||| || ||||||||||| |||||| |||||| ||||||||| ||||||||||||| ||||||||| ||||||||||||||||    
T  6238431 tcccacatcagatagataagactcctgataagagtttatatagaggaggcaatcctcaccttatgaaccggt-ttttaaggatgagtta 6238344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 38 - 188
Target Start/End: Complemental strand, 21428214 - 21428063
Alignment:
Q  38 attcacgcaccaaagcccaaagagtgct-gggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agttt 135  Q
    ||||||||||||| |||||||||||| | |||| ||| ||  |||||||||||||||| ||  ||| |||| ||| |||||||||||||||||| |||||    
T  21428214 attcacgcaccaa-gcccaaagagtgtttgggcatgagggaggtgtattgggaaaaattcaagtcctacattggatagataagactcttgataagagttt 21428116  T
Q  136 aaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    | ||| ||| ||||||||| |||||   |||||||||| | ||||||||||||    
T  21428115 atataaaggtgacaatccttaccttacaaaccggttttgtgaggatgagttag 21428063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 82 - 188
Target Start/End: Original strand, 5222686 - 5222793
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaagga 180  Q
    |||||||||||| | |  ||||||||| || |||||||||||||||||| ||||||  ||||||||||||||||||||||   | |||||||| ||||||    
T  5222686 tattgggaaaaacctaagtcccacatctgatagataagactcttgataagagtttatgtagaggagacaatcctcaccttacaagccggttttataagga 5222785  T
Q  181 tgagttag 188  Q
    ||||||||    
T  5222786 tgagttag 5222793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 82 - 188
Target Start/End: Complemental strand, 38871267 - 38871160
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttgat-aaagtttaaatagaggagacaatcctcaccttctgaaccggttttttaagga 180  Q
    |||||||||||| |||  ||||||||| || |||||||||||||||| |||||||| | ||||||| || ||||||||||  ||||||||||| ||||||    
T  38871267 tattgggaaaaacccaagtcccacatcagatagataagactcttgataaaagtttataaagaggaggcactcctcaccttaagaaccggttttgtaagga 38871168  T
Q  181 tgagttag 188  Q
    || |||||    
T  38871167 tgcgttag 38871160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 81 - 187
Target Start/End: Complemental strand, 39649197 - 39649090
Alignment:
Q  81 gtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaagg 179  Q
    ||||||||||||| |||  |||||||||||| ||||||||||||||| || |||||| | ||||||| |||||||||||||   | |||||||| |||||    
T  39649197 gtattgggaaaaacccaagtcccacatcggatagataagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaagg 39649098  T
Q  180 atgagtta 187  Q
    ||||||||    
T  39649097 atgagtta 39649090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 20 - 126
Target Start/End: Complemental strand, 6238262 - 6238157
Alignment:
Q  20 tgctgggcgtgacggccgattcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataag 119  Q
    |||| |||||||| ||||| |||||||||||||||||||||||| | |||||||   | |||||||||| |||| |||| ||||| |||||| |||||||    
T  6238262 tgctaggcgtgacagccgaatcacgcaccaaagcccaaagagtgttaggcgtgacaagggtgtattggg-aaaacccatgtcccaaatcggatagataag 6238164  T
Q  120 actcttg 126  Q
    |||||||    
T  6238163 actcttg 6238157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 38 - 127
Target Start/End: Complemental strand, 5325081 - 5324993
Alignment:
Q  38 attcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttga 127  Q
    ||||||||||||| ||| |||||||||||||||||| ||| |||||||||||||||| ||  |||||||||||| | |||||||| ||||    
T  5325081 attcacgcaccaaggcc-aaagagtgctgggcgtgaggggggtgtattgggaaaaattcaagtcccacatcggataaataagacttttga 5324993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 50 - 127
Target Start/End: Complemental strand, 24382295 - 24382218
Alignment:
Q  50 aagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttga 127  Q
    ||||||||||||||||  |||||| ||||||||||||||||||  |||  |||||||||||| |||||||||||||||    
T  24382295 aagcccaaagagtgctaagcgtgacgggagtgtattgggaaaatcccaagtcccacatcggatagataagactcttga 24382218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 82 - 188
Target Start/End: Complemental strand, 21539046 - 21538939
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaagga 180  Q
    ||||||||||||||||| ||||| |||||| | ||||||||||||| || | |||| | ||||||| |||||||||||||   |||||||||| ||||||    
T  21539046 tattgggaaaaatccatgtcccatatcggataaataagactcttgagaagaatttataaagaggaggcaatcctcaccttacaaaccggttttgtaagga 21538947  T
Q  181 tgagttag 188  Q
    ||| ||||    
T  21538946 tgatttag 21538939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 50 - 125
Target Start/End: Complemental strand, 24382711 - 24382637
Alignment:
Q  50 aagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactctt 125  Q
    |||||||||||||||||||||||| |||| ||||||| |||||| |||  |||||||||||| |||||||||||||    
T  24382711 aagcccaaagagtgctgggcgtgagggga-tgtattgagaaaaaaccaagtcccacatcggatagataagactctt 24382637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 82 - 187
Target Start/End: Complemental strand, 52846961 - 52846855
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaagga 180  Q
    |||||||||||| |||  |||||||||||| ||||||||||||||| || ||| || | ||||||| |||||||||||||   | |||||||| ||||||    
T  52846961 tattgggaaaaacccaagtcccacatcggatagataagactcttgagaagagtatataaagaggaggcaatcctcaccttacaagccggttttgtaagga 52846862  T
Q  181 tgagtta 187  Q
    |||||||    
T  52846861 tgagtta 52846855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 82 - 188
Target Start/End: Original strand, 25799112 - 25799220
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcacctt-ctgaaccggttttttaagg 179  Q
    |||||||||||| |||| ||||||||| || |||||| |||||||| || |||||| | ||||| | ||||||||||||| | |||| |||||| |||||    
T  25799112 tattgggaaaaacccatgtcccacatcagatagataaaactcttgagaagagtttataaagagggggcaatcctcaccttacagaactggttttgtaagg 25799211  T
Q  180 atgagttag 188  Q
    |||||||||    
T  25799212 atgagttag 25799220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 38 - 93
Target Start/End: Complemental strand, 29273014 - 29272960
Alignment:
Q  38 attcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaa 93  Q
    ||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||    
T  29273014 attcacgcaccaa-gcccaaagagtgctgggcgtgaggggggtgtattgggaaaaa 29272960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 38 - 93
Target Start/End: Complemental strand, 29273173 - 29273119
Alignment:
Q  38 attcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaa 93  Q
    ||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||    
T  29273173 attcacgcaccaa-gcccaaagagtgctgggcgtgaggggggtgtattgggaaaaa 29273119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 82 - 188
Target Start/End: Complemental strand, 29273337 - 29273230
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaagga 180  Q
    |||||||||||| |||  |||||||||||| ||| ||||||||||| || |||||| | || |||| |||||||||||||   | |||||||| ||||||    
T  29273337 tattgggaaaaacccaagtcccacatcggatagacaagactcttgagaagagtttataaaggggaggcaatcctcaccttacaagccggttttgtaagga 29273238  T
Q  181 tgagttag 188  Q
    ||||||||    
T  29273237 tgagttag 29273230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 20 - 58
Target Start/End: Complemental strand, 803393 - 803355
Alignment:
Q  20 tgctgggcgtgacggccgattcacgcaccaaagcccaaa 58  Q
    |||||||||||||||||||||||||||||||||||||||    
T  803393 tgctgggcgtgacggccgattcacgcaccaaagcccaaa 803355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 113 - 188
Target Start/End: Complemental strand, 40196922 - 40196847
Alignment:
Q  113 agataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    |||||||||||||||||| |||||| ||||||||||||||||||| |||  ||| | | ||||||||||||||||||    
T  40196922 agataagactcttgataagagtttatatagaggagacaatcctca-ctttagaaactggtttttaaggatgagttag 40196847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 82 - 188
Target Start/End: Original strand, 9380892 - 9380999
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaagga 180  Q
    |||||||||||| |||  |||||||||||| ||| ||||||||||| || ||| |||| |||| |||||||||||||  |   | |||||||| ||||||    
T  9380892 tattgggaaaaacccaagtcccacatcggatagacaagactcttgagaatagtataaaaagagaagacaatcctcacaatacaagccggttttgtaagga 9380991  T
Q  181 tgagttag 188  Q
    ||||||||    
T  9380992 tgagttag 9380999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 50 - 188
Target Start/End: Complemental strand, 22892832 - 22892693
Alignment:
Q  50 aagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgat-aaagtttaaatagaggagac 148  Q
    |||||||||||||| ||||||||| ||  ||||||||||||||| |||  |||||||||  | | || ||||||||||| | | |||| | |||||||||    
T  22892832 aagcccaaagagtgttgggcgtgacggaggtgtattgggaaaaacccaagtcccacatcaaataaatgagactcttgatgagactttataaagaggagac 22892733  T
Q  149 aatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    | ||||| |||    | |||||||| ||||||||||||||    
T  22892732 actcctcgcctcacaagccggttttgtaaggatgagttag 22892693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 115 - 188
Target Start/End: Original strand, 19863167 - 19863240
Alignment:
Q  115 ataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    |||||||||||||||| |||||| ||||||||  ||||||||||||| ||||| || ||||||| ||||||||||    
T  19863167 ataagactcttgataagagtttatatagaggaagcaatcctcaccttatgaactgg-tttttaacgatgagttag 19863240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 115 - 188
Target Start/End: Original strand, 40073083 - 40073156
Alignment:
Q  115 ataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    |||||||||||| ||| |||||| |||||||||||||||  |||||| |||||||| ||||| ||||||||||||    
T  40073083 ataagactcttggtaagagtttatatagaggagacaatctccaccttatgaaccgg-tttttgaggatgagttag 40073156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 82 - 187
Target Start/End: Complemental strand, 48558433 - 48558327
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaagga 180  Q
    |||||||||||| |||  ||||| |||||| ||||||||||||||| || ||| || | ||||||  |||||||||||||   | |||||||| ||||||    
T  48558433 tattgggaaaaacccaagtcccatatcggatagataagactcttgagaagagtatataaagaggaagcaatcctcaccttacaagccggttttgtaagga 48558334  T
Q  181 tgagtta 187  Q
    |||||||    
T  48558333 tgagtta 48558327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 100 - 188
Target Start/End: Complemental strand, 43361851 - 43361762
Alignment:
Q  100 tcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    |||||||||||| ||| ||||||||||| || |||||| | ||||||  |||||||||||||   | |||||||| ||||||||||||||    
T  43361851 tcccacatcggatagacaagactcttgagaagagtttataaagaggaagcaatcctcaccttacaagccggttttgtaaggatgagttag 43361762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 38 - 85
Target Start/End: Original strand, 11590573 - 11590620
Alignment:
Q  38 attcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtatt 85  Q
    |||||||||||||  ||||||||||||||||||||| ||| |||||||    
T  11590573 attcacgcaccaagccccaaagagtgctgggcgtgaggggggtgtatt 11590620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 82 - 188
Target Start/End: Complemental strand, 20429086 - 20428979
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaagga 180  Q
    |||||| ||| |||||  |||||||||||| | |||||||||||||||| |||||| | ||||||  || | |||||||| |||| ||||||| ||  ||    
T  20429086 tattggaaaacatccaagtcccacatcggatacataagactcttgataatagtttataaagaggaagcatttctcaccttatgaatcggttttgtacaga 20428987  T
Q  181 tgagttag 188  Q
    ||||||||    
T  20428986 tgagttag 20428979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 82 - 188
Target Start/End: Original strand, 45395544 - 45395651
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaagga 180  Q
    |||||||||||| |||  ||||| ||| || |||||||||||||||||| |||||| |  |||||| || ||||||| || ||| | |||||  ||||||    
T  45395544 tattgggaaaaacccaagtcccatatcagatagataagactcttgataagagtttataatgaggaggcactcctcacgttatgagcgggtttgctaagga 45395643  T
Q  181 tgagttag 188  Q
    ||||||||    
T  45395644 tgagttag 45395651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 159
Target Start/End: Original strand, 1233918 - 1233996
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttgat-aaagtttaaatagaggagacaatcctcacct 159  Q
    |||||| ||||| |||  |||||||||||| |||| ||||||||||| | |||||| | |||||||||| |||||||||    
T  1233918 tattggtaaaaacccaagtcccacatcggatagatgagactcttgatgagagtttataaagaggagacactcctcacct 1233996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 188
Target Start/End: Original strand, 13959415 - 13959501
Alignment:
Q  103 cacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    ||||||||| ||||||||||||||| || |||||| | |||||| |||||  |||||||   | | |||||||||||||||||||||    
T  13959415 cacatcggatagataagactcttgagaagagtttataaagaggatacaattttcaccttacaagctggttttttaaggatgagttag 13959501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 142 - 188
Target Start/End: Complemental strand, 47086172 - 47086127
Alignment:
Q  142 aggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    ||||| ||||||||||||| ||||||||| |||||||||||||||||    
T  47086172 aggaggcaatcctcaccttatgaaccggt-ttttaaggatgagttag 47086127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 188
Target Start/End: Complemental strand, 2697425 - 2697336
Alignment:
Q  100 tcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    |||||||||||| ||||| ||||||||| || |||||| | ||||||| || ||||||||||   | |||||||| |||||| |||||||    
T  2697425 tcccacatcggatagataggactcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggacgagttag 2697336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 188
Target Start/End: Complemental strand, 2997355 - 2997266
Alignment:
Q  100 tcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    |||||||||||| ||||||||||||||| || ||| || | ||| ||| ||||||||||||  | | |||||||| ||| ||||||||||    
T  2997355 tcccacatcggatagataagactcttgagaagagtatataaagatgaggcaatcctcacctcataagccggttttgtaaagatgagttag 2997266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 188
Target Start/End: Complemental strand, 4022219 - 4022130
Alignment:
Q  100 tcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    |||||||||||| ||||| ||||||||| || |||||| | ||||||| || ||||||||||   | || ||||| ||||||||||||||    
T  4022219 tcccacatcggatagataggactcttgagaagagtttataaagaggaggcactcctcaccttacaagccagttttgtaaggatgagttag 4022130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 188
Target Start/End: Original strand, 9381109 - 9381198
Alignment:
Q  100 tcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    |||||||||||| ||| ||||||||||| || ||| |||| |||| || |||||||||||||   | |||| ||| ||||||||||||||    
T  9381109 tcccacatcggatagacaagactcttgagaagagtataaaaagagaaggcaatcctcaccttacaagccggctttgtaaggatgagttag 9381198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 188
Target Start/End: Original strand, 17419797 - 17419886
Alignment:
Q  100 tcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    |||||||||||| |||||  |||||||| || |||||| | ||||||| || ||||||||||   | |||||||| ||||||||||||||    
T  17419797 tcccacatcggatagatagcactcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttag 17419886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 188
Target Start/End: Original strand, 43423289 - 43423378
Alignment:
Q  100 tcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    |||||||||||| |||||| |||||||| || |||||| | ||||||| || ||||||||||   | || ||||| ||||||||||||||    
T  43423289 tcccacatcggatagataacactcttgagaagagtttataaagaggaggcactcctcaccttacaagccagttttgtaaggatgagttag 43423378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 102 - 173
Target Start/End: Complemental strand, 10017420 - 10017348
Alignment:
Q  102 ccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggtttt 173  Q
    ||||||| || |||||||||||||||||| |||||| | ||||||  || |||||||||| ||||||| ||||    
T  10017420 ccacatcagatagataagactcttgataagagtttataaagaggaagcactcctcaccttatgaaccgatttt 10017348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 100 - 159
Target Start/End: Original strand, 11590430 - 11590490
Alignment:
Q  100 tcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcacct 159  Q
    |||||||||||| ||| ||||||||||| || |||||| | ||||||| ||||||||||||    
T  11590430 tcccacatcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcacct 11590490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 100 - 159
Target Start/End: Original strand, 15391758 - 15391818
Alignment:
Q  100 tcccacatcggacagataagactcttga-taaagtttaaatagaggagacaatcctcacct 159  Q
    |||||||||||| |||||||||||||||  ||||| || | ||||||| ||||||||||||    
T  15391758 tcccacatcggatagataagactcttgagaaaagtatataaagaggaggcaatcctcacct 15391818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 102 - 185
Target Start/End: Original strand, 15391831 - 15391915
Alignment:
Q  102 ccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagt 185  Q
    |||||||||| ||||||||||||||| || ||| || | ||||||| |||||||||||||   | || ||||| |||||||||||    
T  15391831 ccacatcggatagataagactcttgagaagagtatataaagaggaggcaatcctcaccttacaagccagttttgtaaggatgagt 15391915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 100 - 187
Target Start/End: Original strand, 20735765 - 20735853
Alignment:
Q  100 tcccacatcggacagataagactcttga-taaagtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagtta 187  Q
    ||||||||| || |||||||||||| || || |||||| | ||||||| || ||||||||||   | |||||||| |||||||||||||    
T  20735765 tcccacatcagatagataagactctcgagtagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagtta 20735853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 148 - 188
Target Start/End: Original strand, 25799243 - 25799283
Alignment:
Q  148 caatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    ||||||||||||| |||||| ||||| ||||||||||||||    
T  25799243 caatcctcaccttatgaaccagttttgtaaggatgagttag 25799283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 65 - 188
Target Start/End: Complemental strand, 42844944 - 42844820
Alignment:
Q  65 tgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctg 163  Q
    ||||||||| |||  |||||| | |||||| ||  |||||||||||| |||||| |||||| |||| |||||| | ||| || ||| | |||||||| ||    
T  42844944 tgggcgtgagggggatgtattagaaaaaattcaagtcccacatcggatagataatactctttataagagtttatagagatgatacacttctcaccttatg 42844845  T
Q  164 aaccggttttttaaggatgagttag 188  Q
    ||| | |||| ||||||| ||||||    
T  42844844 aactgattttgtaaggataagttag 42844820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 143; Significance: 5e-75; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 189 - 404
Target Start/End: Original strand, 3640752 - 3640955
Alignment:
Q  189 tcatgtgaatttatataaaagcaatgtgcaacggttctgcacaatcatatatgataattcctaaaacatagagaagtttcctttatttgtggatttaaac 288  Q
    ||||| |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||  |||||    
T  3640752 tcatgggaatttatataaaagcaatgggcaacggttctgcacaatcacatatgataattcctaaagcatagagaagtttcctttatttgtggagctaaac 3640851  T
Q  289 attctggttagttgactgatgtgagctgcaattacagctctttaatcctccaacggctctccaagtattgtgccattaatatgagatttctttttgctac 388  Q
    ||||||            ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3640852 attctg------------atgtgagctgcaattacagttctttaatcctgcaacggctctccaagtattgtgccattaatatgagatttctttttgctac 3640939  T
Q  389 agtcttgtgttttctt 404  Q
    ||||||||||||||||    
T  3640940 agtcttgtgttttctt 3640955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 197 - 400
Target Start/End: Complemental strand, 23871912 - 23871700
Alignment:
Q  197 atttatataaaagcaatgtgcaacggt-------tctgcacaatcatatatgataattcctaaaacatagagaagtttcctttatttgtggatttaaaca 289  Q
    |||||||||||||||||||||||||||       |||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||  ||||||    
T  23871912 atttatataaaagcaatgtgcaacggtcaacggttctgcacaatcacatatgataattcctaaaacatagagaagtttcctttatttgctgagctaaaca 23871813  T
Q  290 ttctggttagttgactgatgtga--gctgcaattacagctctttaatcctccaacggctctccaagtattgtgccattaatatgagatttctttttgcta 387  Q
    |||||||||||||||||||||||  |||||||| ||||||||||||||||||||||||||| || |||||||||||||||||||| ||||||||||||||    
T  23871812 ttctggttagttgactgatgtgaatgctgcaataacagctctttaatcctccaacggctcttcatgtattgtgccattaatatgaaatttctttttgcta 23871713  T
Q  388 cagtcttgtgttt 400  Q
    |||||||||||||    
T  23871712 cagtcttgtgttt 23871700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 20 - 188
Target Start/End: Original strand, 3640386 - 3640556
Alignment:
Q  20 tgctgggcgtgacggccgattcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataag 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||  |||||||||||||||| |||||||    
T  3640386 tgctgggcgtgacggccgattcacgcaccaaagcccaaagagtgctgggcgtgacgggggtgtattgggaaaaactcatctcccacatcggatagataag 3640485  T
Q  120 actcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccgg-ttttttaaggatgagttag 188  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||    
T  3640486 actcttgataagagtttaaatagaggaggcaatcctcaccttctgaaccggtttttttaaggatgagttag 3640556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 23 - 188
Target Start/End: Original strand, 14945077 - 14945242
Alignment:
Q  23 tgggcgtgacggccgattcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagact 122  Q
    |||||||||||| ||||||| |||||||||||||||||||| ||| ||||| ||| |||||||||||||||  ||| |||||||||||| ||||||||||    
T  14945077 tgggcgtgacggtcgattcatgcaccaaagcccaaagagtgttggacgtgacggg-gtgtattgggaaaaacacatgtcccacatcggatagataagact 14945175  T
Q  123 ctt-gataaagtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    ||| || | |||||| ||||||||  ||||||||||||| |||||||||||| ||||||||||||||    
T  14945176 cttcgaaagagtttatatagaggatgcaatcctcaccttatgaaccggttttgtaaggatgagttag 14945242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 20 - 174
Target Start/End: Complemental strand, 8305130 - 8304974
Alignment:
Q  20 tgctgggcgtgacggccgattcacgcaccaaa-gcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataa 118  Q
    |||||||||||||||||||||||||||||||| ||||||||| || | ||||||| ||| |||||||||||||||  ||| ||| |||||||| ||||||    
T  8305130 tgctgggcgtgacggccgattcacgcaccaaaagcccaaagactgtttggcgtgacgggggtgtattgggaaaaactcatgtcctacatcggatagataa 8305031  T
Q  119 gactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttt 174  Q
    |||| ||||||| |||||| ||||||||||||||||||||||| ||||||| |||||    
T  8305030 gacttttgataagagtttatatagaggagacaatcctcaccttatgaaccgattttt 8304974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 37 - 188
Target Start/End: Original strand, 29113397 - 29113548
Alignment:
Q  37 gattcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agttt 135  Q
    |||||||||||||| |||||||||||||||||||||| ||| ||||||||||||||| |||| ||||||||| || ||||||||||||||| || |||||    
T  29113397 gattcacgcaccaa-gcccaaagagtgctgggcgtgacgggggtgtattgggaaaaacccatgtcccacatcagatagataagactcttgagaagagttt 29113495  T
Q  136 aaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    | | ||||||| |||||||||||||   | | |||||| ||||||||||||||    
T  29113496 ataaagaggaggcaatcctcaccttacaagctggttttgtaaggatgagttag 29113548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 38 - 188
Target Start/End: Original strand, 28245942 - 28246092
Alignment:
Q  38 attcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgat-aaagttta 136  Q
    |||||||||||||| ||||||||||||||||||||| ||| ||||||||||||||| |||  |||||||||||| |||| ||||||||||| | ||||||    
T  28245942 attcacgcaccaaa-cccaaagagtgctgggcgtgaggggggtgtattgggaaaaacccaagtcccacatcggatagatgagactcttgatgagagttta 28246040  T
Q  137 aatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
     | |||| || |||||||||||||   |||||||||| ||||||||||||||    
T  28246041 taaagagaaggcaatcctcaccttgcaaaccggttttgtaaggatgagttag 28246092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 22 - 188
Target Start/End: Complemental strand, 14115668 - 14115497
Alignment:
Q  22 ctgggcgtgacggccgattcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaa------aaatccatctcccacatcggacaga 115  Q
    |||||||||||| || ||||||||||||||||||||||| || ||||||||| ||| ||||||||||||      |||  ||| || || |||||| |||    
T  14115668 ctgggcgtgacgacc-attcacgcaccaaagcccaaagaatgttgggcgtgacgggggtgtattgggaagaaaaaaaaaacatgtctcatatcggataga 14115570  T
Q  116 taagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    ||||||||||||||| |||||| ||||||||||||||||| ||||| |||||| | ||||||||||||||||||    
T  14115569 taagactcttgataagagtttatatagaggagacaatccttaccttatgaacctg-tttttaaggatgagttag 14115497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 23 - 160
Target Start/End: Complemental strand, 40716807 - 40716669
Alignment:
Q  23 tgggcgtgacggccgattcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagact 122  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||||||| ||| ||||||||| |||||  ||  |||||||||| | ||||||||||    
T  40716807 tgggcgtgacggccgattcacgcaccaaagcccaaaaagtgttgggcgtgaagggggtgtattggaaaaaactcaagtcccacatcgtatagataagact 40716708  T
Q  123 cttgataa-agtttaaatagaggagacaatcctcacctt 160  Q
    ||||| || ||| || | ||||||| ||||||| |||||    
T  40716707 cttgagaatagtatataaagaggaggcaatccttacctt 40716669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 81 - 188
Target Start/End: Original strand, 3640197 - 3640304
Alignment:
Q  81 gtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaagg 179  Q
    |||||||||||||  ||| |||||| ||||| |||||||||||||||||| |||||| |||||||||||||||||||| || |||||||| |||||||||    
T  3640197 gtattgggaaaaactcatgtcccacgtcggatagataagactcttgataagagtttatatagaggagacaatcctcactttatgaaccgg-tttttaagg 3640295  T
Q  180 atgagttag 188  Q
    |||||||||    
T  3640296 atgagttag 3640304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 37 - 185
Target Start/End: Complemental strand, 1923147 - 1922999
Alignment:
Q  37 gattcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agttt 135  Q
    |||||||||||||| |||||||||||| ||||||||| ||| ||||||||||||||| |||| ||||||||| || ||||||||||||||| || |||||    
T  1923147 gattcacgcaccaa-gcccaaagagtgttgggcgtgacgggggtgtattgggaaaaacccatgtcccacatcagatagataagactcttgagaagagttt 1923049  T
Q  136 aaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagt 185  Q
    | | ||||||  ||||| ||||| |   | |||||||| |||||||||||    
T  1923048 ataaagaggaagcaatcatcaccatacaagccggttttataaggatgagt 1922999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 50 - 188
Target Start/End: Complemental strand, 12016828 - 12016688
Alignment:
Q  50 aagcccaaagagtgctgggcgtgatgggag-tgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggaga 147  Q
    |||||||||||||| ||||||||| ||| | |||||||||||||| |||  |||||||||||| ||| ||||||||||| || |||||| | |||||||     
T  12016828 aagcccaaagagtgttgggcgtgagggggggtgtattgggaaaaacccaagtcccacatcggatagacaagactcttgagaagagtttataaagaggagg 12016729  T
Q  148 caatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    |||||||||||||   | |||||||| ||||||||||||||    
T  12016728 caatcctcaccttacaagccggttttgtaaggatgagttag 12016688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 57 - 188
Target Start/End: Original strand, 56511471 - 56511603
Alignment:
Q  57 aagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctc 155  Q
    ||||| ||||||||||| ||| ||||||||||||||| |||  |||||||| |   |||||||||||||||||| |||||| | ||||||| || |||||    
T  56511471 aagagagctgggcgtgaggggggtgtattgggaaaaacccaagtcccacattgagtagataagactcttgataagagtttataaagaggaggcactcctc 56511570  T
Q  156 accttctgaaccggttttttaaggatgagttag 188  Q
    ||||| ||||||| |||| ||||||||||||||    
T  56511571 accttatgaaccgattttgtaaggatgagttag 56511603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 79 - 188
Target Start/End: Complemental strand, 45684289 - 45684180
Alignment:
Q  79 gtgtattgggaaaaatccatctcccacatcggacagataagactcttgat-aaagtttaaatagaggagacaatcctcaccttctgaaccggttttttaa 177  Q
    ||||||||||||||| |||| |||||||||||| ||||| |||||||||| |||||||| |||||| |||||||||||||||  |||| ||| |||||||    
T  45684289 gtgtattgggaaaaacccatgtcccacatcggatagatacgactcttgataaaagtttatatagagaagacaatcctcacctgatgaatcgg-tttttaa 45684191  T
Q  178 ggatgagttag 188  Q
    || ||||||||    
T  45684190 ggttgagttag 45684180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 77 - 188
Target Start/End: Original strand, 56511284 - 56511396
Alignment:
Q  77 gagtgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggtttttt 175  Q
    ||||||||||||||||| |||  |||||||| |   |||||||||||||||||| |||||| | ||||||| || |||||||||| |||||||||||| |    
T  56511284 gagtgtattgggaaaaacccaagtcccacattgagtagataagactcttgataagagtttataaagaggaggcactcctcaccttatgaaccggttttgt 56511383  T
Q  176 aaggatgagttag 188  Q
    |||||||||||||    
T  56511384 aaggatgagttag 56511396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 38 - 188
Target Start/End: Original strand, 21498480 - 21498630
Alignment:
Q  38 attcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agttta 136  Q
    ||||||||||||| ||| |||||||||||||| ||| ||| ||||||||||||||| |||  |||||||||||| ||| ||||||||||| || ||| ||    
T  21498480 attcacgcaccaa-gcctaaagagtgctgggcatgaggggggtgtattgggaaaaacccaagtcccacatcggatagacaagactcttgagaagagtata 21498578  T
Q  137 aatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
     | |||| ||  ||||||||||||   | |||||||| ||||||||||||||    
T  21498579 taaagagaaggtaatcctcaccttacaagccggttttgtaaggatgagttag 21498630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 82 - 188
Target Start/End: Original strand, 53863897 - 53864004
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaagga 180  Q
    ||||| |||||| |||  ||| |||||||| |||||||||| ||||||| |||||| | |||||||||| |||||||||| |||||||||||| ||||||    
T  53863897 tattgagaaaaacccaagtccaacatcggatagataagacttttgataatagtttataaagaggagacactcctcaccttatgaaccggttttgtaagga 53863996  T
Q  181 tgagttag 188  Q
    ||||||||    
T  53863997 tgagttag 53864004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 81 - 188
Target Start/End: Complemental strand, 8560084 - 8559976
Alignment:
Q  81 gtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaagg 179  Q
    |||||||||||| ||||  |||||||||||| |||||||||||||||||| |||||| || |||||| |||||||||| ||   | |||||||| |||||    
T  8560084 gtattgggaaaagtccaagtcccacatcggatagataagactcttgataagagtttatatcgaggaggcaatcctcactttagaagccggttttgtaagg 8559985  T
Q  180 atgagttag 188  Q
    |||||||||    
T  8559984 atgagttag 8559976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 38 - 188
Target Start/End: Complemental strand, 27634479 - 27634331
Alignment:
Q  38 attcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agttta 136  Q
    ||||||||||||| |||||||||||| ||||||||| |||  |||||||||||||| | |  |||||||||||| ||||||||||||||| || ||| ||    
T  27634479 attcacgcaccaa-gcccaaagagtgttgggcgtgagggg--tgtattgggaaaaaccaaagtcccacatcggatagataagactcttgagaagagtata 27634383  T
Q  137 aatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
     | ||||||| |||| ||||||||   | ||| |||| ||||||||||||||    
T  27634382 taaagaggaggcaattctcaccttacaagccgattttgtaaggatgagttag 27634331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 113 - 188
Target Start/End: Original strand, 41743559 - 41743634
Alignment:
Q  113 agataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    |||||||||||||||||| |||||| ||||||||| ||||||||||||| |||||||| ||||||||||||||||||    
T  41743559 agataagactcttgataagagtttatatagaggaggcaatcctcaccttatgaaccgg-tttttaaggatgagttag 41743634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 81 - 188
Target Start/End: Complemental strand, 47491959 - 47491852
Alignment:
Q  81 gtattgggaaaaatccatctcccacatcggacagataagactcttgata-aagtttaaatagaggagacaatcctcaccttctgaaccggttttttaagg 179  Q
    ||||||||||||| |||| |||||||||||| |||||||||||||||||  |||||| ||| ||||| ||||||||| |||  |||| || |||||||||    
T  47491959 gtattgggaaaaacccatgtcccacatcggatagataagactcttgataggagtttatataaaggaggcaatcctcaacttaagaactgg-tttttaagg 47491861  T
Q  180 atgagttag 188  Q
    |||||||||    
T  47491860 atgagttag 47491852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 82 - 188
Target Start/End: Complemental strand, 25753717 - 25753610
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaagga 180  Q
    |||||||||||| |||  |||||||||||| ||| |||||||||||||| |||||| | ||||||| |||||||||||||   | |||||||| ||||||    
T  25753717 tattgggaaaaacccaagtcccacatcggatagacaagactcttgataagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaagga 25753618  T
Q  181 tgagttag 188  Q
    ||||||||    
T  25753617 tgagttag 25753610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 82 - 188
Target Start/End: Original strand, 43943665 - 43943772
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaagga 180  Q
    |||||||||||| |||  |||||||||||| ||||||||||||||| || |||||| | ||||||| |||||||||||||   | |||||||| ||||||    
T  43943665 tattgggaaaaacccaagtcccacatcggatagataagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaagga 43943764  T
Q  181 tgagttag 188  Q
    ||||||||    
T  43943765 tgagttag 43943772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 82 - 174
Target Start/End: Original strand, 9758296 - 9758389
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttt 174  Q
    ||||||||||| | ||| |||||||||||| |||||||||||||||||| |||||| |||||||||||||  |||| |||  ||||||||||||    
T  9758296 tattgggaaaagttcatatcccacatcggatagataagactcttgataagagtttatatagaggagacaactctcatcttaagaaccggttttt 9758389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 100 - 188
Target Start/End: Complemental strand, 10390569 - 10390480
Alignment:
Q  100 tcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    |||||||| ||| ||||||| |||||||||| |||||| | |||||||||| |||||||||| |||||| ||||| ||||||||||||||    
T  10390569 tcccacattggatagataagtctcttgataatagtttataaagaggagacattcctcaccttatgaaccagttttgtaaggatgagttag 10390480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 82 - 188
Target Start/End: Original strand, 5488359 - 5488466
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaagga 180  Q
    |||||||||||| |||  |||||||||||| | ||||||||||||| || |||||| | ||||||| |||||||||||||   | |||||||| ||||||    
T  5488359 tattgggaaaaacccaagtcccacatcggataaataagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaagga 5488458  T
Q  181 tgagttag 188  Q
    ||||||||    
T  5488459 tgagttag 5488466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 78 - 160
Target Start/End: Complemental strand, 7892767 - 7892685
Alignment:
Q  78 agtgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcacctt 160  Q
    ||||||||||||||| || |  |||||||||||| |||||||||||||||||  |||||| |||||||||||||||||||||||    
T  7892767 agtgtattgggaaaattcaag-tcccacatcggatagataagactcttgatatgagtttatatagaggagacaatcctcacctt 7892685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 82 - 188
Target Start/End: Complemental strand, 12017003 - 12016896
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaagga 180  Q
    |||||||||||| |||  |||||||||||| ||| ||||||||||| || |||||| | ||||||| |||||||||||||   | |||||||| ||||||    
T  12017003 tattgggaaaaacccaagtcccacatcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaagga 12016904  T
Q  181 tgagttag 188  Q
    ||||||||    
T  12016903 tgagttag 12016896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 102 - 188
Target Start/End: Original strand, 22865781 - 22865868
Alignment:
Q  102 ccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    |||||||||| ||||||||| |||||||| |||||| | ||||| | || |||||||||| |||||||||||| ||||||||||||||    
T  22865781 ccacatcggatagataagacccttgataatagtttataaagagggggcagtcctcaccttatgaaccggttttgtaaggatgagttag 22865868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 94 - 188
Target Start/End: Complemental strand, 45684489 - 45684395
Alignment:
Q  94 tccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    ||||| |||||||||||| |||||||||||||| ||| || ||| || |||||| ||||||||||||| |||||| | ||||||||||||||||||    
T  45684489 tccatgtcccacatcggatagataagactcttggtaagagcttatatggaggaggcaatcctcaccttatgaaccag-tttttaaggatgagttag 45684395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 82 - 188
Target Start/End: Original strand, 28395170 - 28395276
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttgataaagtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggat 181  Q
    |||||||||||| |||  |||||||| ||| ||||||||||||||| | ||| || | ||||||| |||||||||||||   | |||||||| |||||||    
T  28395170 tattgggaaaaacccaagtcccacattggatagataagactcttgaaagagtatataaagaggaggcaatcctcaccttacaagccggttttgtaaggat 28395269  T
Q  182 gagttag 188  Q
    |||||||    
T  28395270 gagttag 28395276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 53 - 186
Target Start/End: Original strand, 39110870 - 39111004
Alignment:
Q  53 cccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaat 151  Q
    ||||||||||| | ||||| | ||| |||||||||||||||  ||  |||||||||||| ||||||||||||||| || ||| || | ||||||||||||    
T  39110870 cccaaagagtgtttggcgtaaggggggtgtattgggaaaaactcaagtcccacatcggatagataagactcttgagaagagtatataaagaggagacaat 39110969  T
Q  152 cctcaccttctgaaccggttttttaaggatgagtt 186  Q
    |||| ||||   | |||||||| ||||| ||||||    
T  39110970 cctcgccttacaagccggttttgtaaggttgagtt 39111004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 60 - 188
Target Start/End: Complemental strand, 42562000 - 42561871
Alignment:
Q  60 agtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgat-aaagtttaaatagaggagacaatcctcacc 158  Q
    |||||| |||||||  ||||||||||||||||||  ||| ||| |||||||| | |||||||||||||| ||| |||| ||||||||| ||||| |||||    
T  42562000 agtgcttggcgtgacaggagtgtattgggaaaaactcatatcctacatcggatatataagactcttgataaaattttatatagaggaggcaatcatcacc 42561901  T
Q  159 tt-ctgaaccggttttttaaggatgagttag 188  Q
    ||  ||||||   ||||||||||||||||||    
T  42561900 ttattgaacc-aatttttaaggatgagttag 42561871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 82 - 186
Target Start/End: Complemental strand, 28497326 - 28497221
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaagga 180  Q
    |||||||||||| |||  |||||||||||| |||||||||||||||||| |||||| | ||||||| || || ||  ||| | |||||||||| ||||||    
T  28497326 tattgggaaaaacccaagtcccacatcggatagataagactcttgataagagtttataaagaggaggcactcttcggcttgtaaaccggttttgtaagga 28497227  T
Q  181 tgagtt 186  Q
    ||||||    
T  28497226 tgagtt 28497221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 38 - 123
Target Start/End: Original strand, 33629813 - 33629896
Alignment:
Q  38 attcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactc 123  Q
    ||||||||||||| ||||||||||||||||||||||  || ||||||||||||||| |||  |||||||||||| |||| ||||||    
T  33629813 attcacgcaccaa-gcccaaagagtgctgggcgtgagtgg-gtgtattgggaaaaacccaagtcccacatcggatagatgagactc 33629896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 58 - 127
Target Start/End: Complemental strand, 53559441 - 53559372
Alignment:
Q  58 agagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttga 127  Q
    |||||||||||||||| ||| ||||||||||||||| |||  |||||||||||| |||||| ||||||||    
T  53559441 agagtgctgggcgtgaggggggtgtattgggaaaaaaccaagtcccacatcggatagataaaactcttga 53559372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 38 - 188
Target Start/End: Complemental strand, 17077094 - 17076945
Alignment:
Q  38 attcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgat-aaagttta 136  Q
    ||||||||||||| ||| |||||||| ||||||||| | | ||||||||||||||| |||  |||||||||||| |||| ||||||||||| | |||| |    
T  17077094 attcacgcaccaa-gcctaaagagtgatgggcgtgaggtg-gtgtattgggaaaaacccaagtcccacatcggatagatgagactcttgatgagagttca 17076997  T
Q  137 aatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
     | ||||||| ||| |||||| ||   | |||||||| ||||| ||||||||    
T  17076996 taaagaggaggcaaccctcactttgcaagccggttttgtaaggttgagttag 17076945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 82 - 160
Target Start/End: Original strand, 23350791 - 23350870
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcacctt 160  Q
    |||||||||||| |||  |||||||||||| | |||||||||||||||| ||| || | |||||||||||||||||||||    
T  23350791 tattgggaaaaacccaaatcccacatcggataaataagactcttgataagagtatataaagaggagacaatcctcacctt 23350870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 38 - 93
Target Start/End: Complemental strand, 35399364 - 35399310
Alignment:
Q  38 attcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaa 93  Q
    ||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||    
T  35399364 attcacgcaccaa-gcccaaagagtgctgggcgtgaggggggtgtattgggaaaaa 35399310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 82 - 160
Target Start/End: Complemental strand, 49380992 - 49380913
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcacctt 160  Q
    ||||||||||||||||  || ||||||||| ||||||||||||||| || |||||| | ||||||| |||||||||||||    
T  49380992 tattgggaaaaatccaagtctcacatcggatagataagactcttgagaagagtttataaagaggaggcaatcctcacctt 49380913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 87 - 185
Target Start/End: Original strand, 50307273 - 50307372
Alignment:
Q  87 ggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagt 185  Q
    ||||||| |||  |||||||||||| ||||||||||||||| || |||||| | || |||| || |||||||||| |||||| ||||| |||||||||||    
T  50307273 ggaaaaacccaagtcccacatcggatagataagactcttgacaagagtttataaagcggaggcactcctcaccttatgaaccagttttgtaaggatgagt 50307372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 103 - 188
Target Start/End: Complemental strand, 10390767 - 10390681
Alignment:
Q  103 cacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    ||||||||| | ||||| |||||||||| |||||| | |||||||||| |||||||||| | |||| ||||| ||||||||||||||    
T  10390767 cacatcggatatataagtctcttgataatagtttataaagaggagacactcctcaccttatcaaccagttttataaggatgagttag 10390681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 113 - 186
Target Start/End: Complemental strand, 14115826 - 14115753
Alignment:
Q  113 agataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagtt 186  Q
    ||||||||| |||||||| |||||| ||||||||  ||||||||||||| ||||||||| |||||||||||||||    
T  14115826 agataagacacttgataagagtttatatagaggatgcaatcctcaccttatgaaccggt-ttttaaggatgagtt 14115753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 102 - 183
Target Start/End: Original strand, 14944906 - 14944988
Alignment:
Q  102 ccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatga 183  Q
    ||||||| || |||||||||||||| ||| |||||| ||||||||| | ||||||||||| ||||||| |||| |||||||||    
T  14944906 ccacatcagatagataagactcttggtaagagtttacatagaggaggcgatcctcaccttatgaaccgtttttgtaaggatga 14944988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 100 - 188
Target Start/End: Original strand, 15665163 - 15665252
Alignment:
Q  100 tcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    |||||||||||| ||||| ||||||||| || |||||| ||||||||| || ||||||||||   | |||||||| ||||||||||||||    
T  15665163 tcccacatcggatagataggactcttgagaagagtttatatagaggaggcactcctcaccttacaagccggttttgtaaggatgagttag 15665252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 82 - 188
Target Start/End: Original strand, 28245783 - 28245887
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttgataaagtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggat 181  Q
    |||||||||||| |||  |||||||||||| |||| |||||| ||| |  ||||| | ||||||| |||||||||||||   | |||||||| |||||||    
T  28245783 tattgggaaaaacccaagtcccacatcggatagatgagactcatgaga--gtttataaagaggaggcaatcctcaccttgcaagccggttttgtaaggat 28245880  T
Q  182 gagttag 188  Q
    |||||||    
T  28245881 gagttag 28245887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 80 - 188
Target Start/End: Complemental strand, 17077258 - 17077149
Alignment:
Q  80 tgtattgggaaaaatccatctcccacatcggacagataagactcttgat-aaagtttaaatagaggagacaatcctcaccttctgaaccggttttttaag 178  Q
    |||||||||||||| |||  |||||||||||| |||| ||||||||||| | |||| | | ||||||| ||| |||||||||   | |||||||| ||||    
T  17077258 tgtattgggaaaaacccaagtcccacatcggatagatgagactcttgatgagagttcataaagaggaggcaaccctcaccttgcaagccggttttgtaag 17077159  T
Q  179 gatgagttag 188  Q
    | ||||||||    
T  17077158 gttgagttag 17077149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 79 - 187
Target Start/End: Complemental strand, 33797224 - 33797115
Alignment:
Q  79 gtgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaa 177  Q
    ||||||||||||||| ||   |||||||| ||| ||||| |||||||||||| |||||| | ||| ||| || |||||||||||  | |||||||  |||    
T  33797224 gtgtattgggaaaaacccgaatcccacattggatagataggactcttgataagagtttataaagacgaggcactcctcaccttccaagccggtttcgtaa 33797125  T
Q  178 ggatgagtta 187  Q
    ||||||||||    
T  33797124 ggatgagtta 33797115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 57 - 185
Target Start/End: Complemental strand, 52827368 - 52827240
Alignment:
Q  57 aagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctc 155  Q
    ||||||| ||||||||| ||| ||||||||  ||||| |||  || ||||| ||| ||||| |||||||||||| |||||| | ||||||| || |||||    
T  52827368 aagagtgttgggcgtgagggg-gtgtattgttaaaaacccaagtctcacattggatagataggactcttgataagagtttataaagaggaggcactcctc 52827270  T
Q  156 accttctgaaccggttttttaaggatgagt 185  Q
    |||||   | |||||||| |||||||||||    
T  52827269 accttacaagccggttttgtaaggatgagt 52827240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 56 - 127
Target Start/End: Original strand, 5066026 - 5066096
Alignment:
Q  56 aaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttga 127  Q
    |||||||| ||||||||| ||| |||||||||||||||| ||  ||||||||| || | |||||||||||||    
T  5066026 aaagagtgttgggcgtgagggg-gtgtattgggaaaaattcaagtcccacatcagataaataagactcttga 5066096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 60 - 185
Target Start/End: Original strand, 3055753 - 3055879
Alignment:
Q  60 agtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgat-aaagtttaaatagaggagacaatcctcacc 158  Q
    |||||||||| ||| ||| ||| ||||||||||| |||  |||||||| ||| ||||| |||||||||| | |||||| | ||||||  || ||||||||    
T  3055753 agtgctgggcatgaggggggtgaattgggaaaaacccaagtcccacattggatagataggactcttgatgagagtttataaagaggatgcactcctcacc 3055852  T
Q  159 ttctgaaccggttttttaaggatgagt 185  Q
    ||   |  ||||||| |||||||||||    
T  3055853 ttaaaagtcggttttgtaaggatgagt 3055879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 188
Target Start/End: Original strand, 23018483 - 23018569
Alignment:
Q  103 cacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    ||||||||| ||||| ||||||||| || |||||| | ||||||| || ||||||||||   | |||||||| ||||||||||||||    
T  23018483 cacatcggatagatatgactcttgagaagagtttataaagaggaggcattcctcaccttacaagccggttttgtaaggatgagttag 23018569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 188
Target Start/End: Original strand, 990557 - 990646
Alignment:
Q  100 tcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    |||||||||||| |||||| |||||||| || |||||| | ||||||| || ||||||||||   |  ||||||| ||||||||||||||    
T  990557 tcccacatcggatagataacactcttgagaagagtttataaagaggaggcactcctcaccttacaagtcggttttgtaaggatgagttag 990646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 188
Target Start/End: Original strand, 991214 - 991303
Alignment:
Q  100 tcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    |||||||||||| |||||| |||||||| || |||||| |  |||||| || ||||||||||   | |||||||| ||||||||||||||    
T  991214 tcccacatcggatagataacactcttgagaagagtttataatgaggaggcactcctcaccttacaagccggttttgtaaggatgagttag 991303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 160
Target Start/End: Complemental strand, 4905599 - 4905538
Alignment:
Q  100 tcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcacctt 160  Q
    |||||| ||||| ||||||||||||||| || ||| || | |||||||||||||||||||||    
T  4905599 tcccacgtcggatagataagactcttgagaagagtgtataaagaggagacaatcctcacctt 4905538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 188
Target Start/End: Complemental strand, 29669457 - 29669368
Alignment:
Q  100 tcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    |||||||||||| |||||  |||||||| || |||||| | ||||||| || ||||||||||   | |||||||| ||||||||||||||    
T  29669457 tcccacatcggatagatagcactcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttag 29669368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 188
Target Start/End: Original strand, 43972365 - 43972454
Alignment:
Q  100 tcccacatcggacagataagactcttgataaa-gtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    |||||||||||| ||||| ||||||||| ||| ||| | | ||||||| || ||||||||||   | |||||||| ||||||||||||||    
T  43972365 tcccacatcggatagataggactcttgagaaaagttgataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttag 43972454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 188
Target Start/End: Original strand, 51469491 - 51469580
Alignment:
Q  100 tcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    |||||||||||| ||||| ||||||||| || |||||| | ||||||| || ||||||||||   | |||||| | ||||||||||||||    
T  51469491 tcccacatcggatagataggactcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttgtgtaaggatgagttag 51469580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 188
Target Start/End: Original strand, 52214625 - 52214714
Alignment:
Q  100 tcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    |||||||| ||  |||||| ||||||||||| |||||| | ||||||| || ||||||||||   | |||||||| ||||||||||||||    
T  52214625 tcccacattgggtagataatactcttgataagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttag 52214714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 188
Target Start/End: Original strand, 53740192 - 53740281
Alignment:
Q  100 tcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    |||||||||||| |||||  |||||||| || |||||| | ||||||| || ||||||||||   | |||||||| ||||||||||||||    
T  53740192 tcccacatcggatagatagtactcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttag 53740281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 115; Significance: 3e-58; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 182 - 400
Target Start/End: Original strand, 26689680 - 26689901
Alignment:
Q  182 gagttagtcatgtgaatttatataaaagcaatgtgcaacggttctgcacaatcatata-tgataattcctaaaacatagagaagtttcctttatttgtgg 280  Q
    ||||| |||||| |||||||||||||| ||||||||||| |||||||||||||| ||| |||| |||||||||||||||| ||||||||||| ||||| |    
T  26689680 gagttggtcatgggaatttatataaaaacaatgtgcaactgttctgcacaatcacataatgattattcctaaaacatagacaagtttcctttgtttgttg 26689779  T
Q  281 atttaaacattctggttagttgactgatgtga--gctgcaattacagctctttaatcctccaacggctctccaagtattgtgccattaatatgagatttc 378  Q
    |  |||| |||||||||||||||||||| |||  ||| |||||||| |||||||||| ||||||||||||||| ||| |||| |||||||||||||||||    
T  26689780 agctaaagattctggttagttgactgatttgaatgctccaattacaactctttaatcttccaacggctctccatgtaatgtgtcattaatatgagatttc 26689879  T
Q  379 tttttgctacagtcttgtgttt 400  Q
    | |||||||| ||||| |||||    
T  26689880 tctttgctacggtcttctgttt 26689901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 182 - 400
Target Start/End: Original strand, 26959411 - 26959632
Alignment:
Q  182 gagttagtcatgtgaatttatataaaagcaatgtgcaacggttctgcacaatcatata-tgataattcctaaaacatagagaagtttcctttatttgtgg 280  Q
    ||||| |||||| |||||||||||||| ||||||||||| |||||||||||||| ||| |||| |||||||||||||||| ||||||||||| ||||| |    
T  26959411 gagttggtcatgggaatttatataaaaacaatgtgcaactgttctgcacaatcacataatgattattcctaaaacatagacaagtttcctttgtttgttg 26959510  T
Q  281 atttaaacattctggttagttgactgatgtga--gctgcaattacagctctttaatcctccaacggctctccaagtattgtgccattaatatgagatttc 378  Q
    |  |||| |||||||||||||||||||| |||  ||| |||||||| |||||||||| ||||||||||||||| ||| |||| |||||||||||||||||    
T  26959511 agctaaagattctggttagttgactgatttgaatgctccaattacaactctttaatcttccaacggctctccatgtaatgtgtcattaatatgagatttc 26959610  T
Q  379 tttttgctacagtcttgtgttt 400  Q
    | |||||||| ||||| |||||    
T  26959611 tctttgctacggtcttctgttt 26959632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 38 - 188
Target Start/End: Complemental strand, 48259 - 48109
Alignment:
Q  38 attcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agttta 136  Q
    ||||||||||||| |||||||||||||||||||||| ||| ||||||||||||||| |||  |||||||||||| ||| ||||||||||| || ||||||    
T  48259 attcacgcaccaa-gcccaaagagtgctgggcgtgaggggggtgtattgggaaaaacccaagtcccacatcggatagacaagactcttgagaagagttta 48161  T
Q  137 aatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
     | ||||||| |||||||||||||   | |||||||| ||||||||||||||    
T  48160 taaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttag 48109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 53 - 188
Target Start/End: Original strand, 39268190 - 39268325
Alignment:
Q  53 cccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaat 151  Q
    ||||||||||||||||||||| ||| ||||||||||||||| |||  |||||||||||| |||||| ||||||||||| |||||| | |  |||| || |    
T  39268190 cccaaagagtgctgggcgtgagggg-gtgtattgggaaaaacccaagtcccacatcggatagataaaactcttgataagagtttataaattggaggcact 39268288  T
Q  152 cctcaccttctgaaccggttttttaaggatgagttag 188  Q
    ||||||||| |||||||||||||||||||||||||||    
T  39268289 cctcaccttatgaaccggttttttaaggatgagttag 39268325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 38 - 160
Target Start/End: Complemental strand, 43490411 - 43490289
Alignment:
Q  38 attcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agttta 136  Q
    ||||||||||||| |||||||||||||||||||||| ||| ||||||||||||||| |||  |||||||||||| ||||||||||||||| || ||||||    
T  43490411 attcacgcaccaa-gcccaaagagtgctgggcgtgaggggggtgtattgggaaaaacccaagtcccacatcggatagataagactcttgagaagagttta 43490313  T
Q  137 aatagaggagacaatcctcacctt 160  Q
     | ||||||||||||| |||||||    
T  43490312 taaagaggagacaatcttcacctt 43490289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 50 - 188
Target Start/End: Complemental strand, 2908706 - 2908567
Alignment:
Q  50 aagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagac 148  Q
    |||| |||||||||||||||||||  || ||||||||||||||| |||  |||||||||||| ||| ||||||||||| || |||||| | ||||||| |    
T  2908706 aagctcaaagagtgctgggcgtgagaggggtgtattgggaaaaacccaagtcccacatcggatagacaagactcttgagaatagtttataaagaggaggc 2908607  T
Q  149 aatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    ||||||||||||   | |||||||| ||||||||||||||    
T  2908606 aatcctcaccttacaagccggttttgtaaggatgagttag 2908567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 38 - 188
Target Start/End: Original strand, 34457252 - 34457402
Alignment:
Q  38 attcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agttta 136  Q
    ||||||||||||| |||||||||||| ||||||||| ||| ||||||||||||||| |||  |||||||||||| ||| ||||||||||| || ||||||    
T  34457252 attcacgcaccaa-gcccaaagagtgatgggcgtgaggggggtgtattgggaaaaacccaagtcccacatcggatagacaagactcttgagaagagttta 34457350  T
Q  137 aatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
     | ||||||  |||| ||||||||   | |||||||| ||||||||||||||    
T  34457351 taaagaggatgcaattctcaccttacaagccggttttgtaaggatgagttag 34457402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 38 - 186
Target Start/End: Original strand, 11632381 - 11632528
Alignment:
Q  38 attcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agttta 136  Q
    ||||||||||||| | |||||||||| ||||||||| ||| ||||||||| |||||||||  |||||||||||| ||| ||||||||||| || ||||||    
T  11632381 attcacgcaccaa-gtccaaagagtgttgggcgtgagggg-gtgtattggaaaaaatccaagtcccacatcggatagacaagactcttgagaagagttta 11632478  T
Q  137 aatagaggagacaatcctcaccttctgaaccggttttttaaggatgagtt 186  Q
     | ||| ||| ||||||||||||| | | |||||||| ||||||||||||    
T  11632479 taaagatgaggcaatcctcaccttataagccggttttgtaaggatgagtt 11632528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 82 - 184
Target Start/End: Complemental strand, 4563803 - 4563701
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaagga 180  Q
    ||||||||||||  ||| || ||||||||| |||||||||| ||||||| |||||| ||||||||||||||||||||||| ||||||||| |||||||||    
T  4563803 tattgggaaaaactcatgtctcacatcggatagataagacttttgataagagtttacatagaggagacaatcctcaccttatgaaccggt-ttttaagga 4563705  T
Q  181 tgag 184  Q
    ||||    
T  4563704 tgag 4563701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 38 - 160
Target Start/End: Complemental strand, 18914316 - 18914194
Alignment:
Q  38 attcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttga-taaagttta 136  Q
    ||||||||||||| ||||||| |||||||||||||| ||| ||||||||||||||| |||  |||||||||||| ||  |||||||||||  ||||||||    
T  18914316 attcacgcaccaa-gcccaaaaagtgctgggcgtgaggggggtgtattgggaaaaacccaagtcccacatcggatagtcaagactcttgagaaaagttta 18914218  T
Q  137 aatagaggagacaatcctcacctt 160  Q
     | | |||||||||||||||||||    
T  18914217 taaaaaggagacaatcctcacctt 18914194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 83 - 188
Target Start/End: Complemental strand, 18873305 - 18873200
Alignment:
Q  83 attgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggat 181  Q
    ||||||||||  |||| |||||||||||| |||||||||| ||||||| |||||| ||||||||| ||||||||||||| |||||| | |||||||||||    
T  18873305 attgggaaaagcccatgtcccacatcggatagataagactattgataagagtttatatagaggaggcaatcctcaccttatgaaccag-tttttaaggat 18873207  T
Q  182 gagttag 188  Q
    |||||||    
T  18873206 gagttag 18873200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 82 - 188
Target Start/End: Original strand, 38376723 - 38376830
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaagga 180  Q
    |||||||||||| |||  |||||||||||| ||||||||||||||| || |||||| | |||||||||||||||||||||   | |||||||| ||||||    
T  38376723 tattgggaaaaacccaagtcccacatcggatagataagactcttgagaagagtttataaagaggagacaatcctcaccttacaagccggttttgtaagga 38376822  T
Q  181 tgagttag 188  Q
    ||||||||    
T  38376823 tgagttag 38376830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 84 - 188
Target Start/End: Original strand, 30330643 - 30330748
Alignment:
Q  84 ttgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatg 182  Q
    ||||||||||||||  |||||||||||| ||||||||||||  || | |||||| ||||||||| |||||||||||||   |||||||||| ||||||||    
T  30330643 ttgggaaaaatccaagtcccacatcggatagataagactctgaattagagtttatatagaggaggcaatcctcaccttacaaaccggttttgtaaggatg 30330742  T
Q  183 agttag 188  Q
    ||||||    
T  30330743 agttag 30330748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 81 - 188
Target Start/End: Complemental strand, 28358148 - 28358040
Alignment:
Q  81 gtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaagg 179  Q
    ||||||||||||| |||  |||||||||||| ||| ||||||||||| || |||||| | |||||||||||||||||||||   | |||||||| |||||    
T  28358148 gtattgggaaaaacccaagtcccacatcggatagacaagactcttgagaagagtttataaagaggagacaatcctcaccttacaagccggttttgtaagg 28358049  T
Q  180 atgagttag 188  Q
    |||||||||    
T  28358048 atgagttag 28358040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 82 - 188
Target Start/End: Original strand, 3762898 - 3763005
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaagga 180  Q
    |||||||||||| |||| |||||||||||| ||||||||||||||| || |||||| | ||||||| ||||| |||||||   | |||||||| ||||||    
T  3762898 tattgggaaaaacccatgtcccacatcggatagataagactcttgagaagagtttataaagaggaggcaatcttcaccttacaagccggttttgtaagga 3762997  T
Q  181 tgagttag 188  Q
    ||||||||    
T  3762998 tgagttag 3763005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 38 - 159
Target Start/End: Complemental strand, 15510660 - 15510538
Alignment:
Q  38 attcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agttta 136  Q
    |||||||||||||  ||||||||||||||||||||| ||  ||||||| ||| ||||||   |||||||||||| ||| | ||||||||| || ||||||    
T  15510660 attcacgcaccaagccccaaagagtgctgggcgtgagggaggtgtattaggagaaatccgagtcccacatcggatagacacgactcttgagaagagttta 15510561  T
Q  137 aatagaggagacaatcctcacct 159  Q
     | ||||||| ||||||||||||    
T  15510560 taaagaggaggcaatcctcacct 15510538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 38 - 123
Target Start/End: Original strand, 13413739 - 13413823
Alignment:
Q  38 attcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactc 123  Q
    ||||||||||||| |||||||||||||||||||| | |||  |||||||||||||| |||  |||||||||||| |||||||||||    
T  13413739 attcacgcaccaa-gcccaaagagtgctgggcgtaagggggatgtattgggaaaaacccaagtcccacatcggatagataagactc 13413823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 35 - 119
Target Start/End: Original strand, 3763047 - 3763129
Alignment:
Q  35 ccgattcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataag 119  Q
    |||||||||||||||| |||||||||||| ||||||||| | | ||||||||||||||| |||| |||||||||||| |||||||    
T  3763047 ccgattcacgcaccaa-gcccaaagagtgatgggcgtgacgag-gtgtattgggaaaaacccatgtcccacatcggatagataag 3763129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 39268010 - 39268106
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaa 177  Q
    |||||||||||| |||  |||||||||||| |||||||||||||||||| |||||| | | ||||| || |||||||||| ||||| ||||||||||    
T  39268010 tattgggaaaaacccaagtcccacatcggatagataagactcttgataagagtttataaataggaggcactcctcaccttatgaactggttttttaa 39268106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 38 - 188
Target Start/End: Complemental strand, 3015571 - 3015422
Alignment:
Q  38 attcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgat-aaagttta 136  Q
    ||||||||||||| |||||||||||| ||||||||| ||| ||||||||||||||| |||   ||||||||||| |||| ||||||||||| | |||| |    
T  3015571 attcacgcaccaa-gcccaaagagtgatgggcgtgagggg-gtgtattgggaaaaacccaagccccacatcggatagatgagactcttgatgagagttca 3015474  T
Q  137 aatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
     | ||||||| ||| |||||| ||   | |||||||| ||||| ||||||||    
T  3015473 taaagaggaggcaaccctcacattgcaagccggttttgtaaggttgagttag 3015422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 82 - 188
Target Start/End: Complemental strand, 43490575 - 43490468
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaagga 180  Q
    |||||||||||| |||  |||||||||||| ||| ||||||||||| || |||||| | |||| ||||||| |||||||||  | |||||||| ||||||    
T  43490575 tattgggaaaaacccaagtcccacatcggatagacaagactcttgagaagagtttataaagagaagacaatactcaccttccaagccggttttgtaagga 43490476  T
Q  181 tgagttag 188  Q
    ||||||||    
T  43490475 tgagttag 43490468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 79 - 188
Target Start/End: Original strand, 18107822 - 18107932
Alignment:
Q  79 gtgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaa 177  Q
    ||||||||||||||| |||  |||||||||| |  ||||||||||||||||| | |||| | ||||||| || |||||||||| | |||||||||| |||    
T  18107822 gtgtattgggaaaaacccaattcccacatcgaatcgataagactcttgataagaatttataaagaggaggcactcctcaccttataaaccggttttgtaa 18107921  T
Q  178 ggatgagttag 188  Q
    |||||| ||||    
T  18107922 ggatgaattag 18107932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 100 - 188
Target Start/End: Complemental strand, 35527082 - 35526993
Alignment:
Q  100 tcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    |||||||||||| ||||||||||||||| || |||||| | ||||||| |||||||||||||   | |||||||| ||||||||||||||    
T  35527082 tcccacatcggatagataagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttag 35526993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 81 - 188
Target Start/End: Complemental strand, 2908882 - 2908774
Alignment:
Q  81 gtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaagg 179  Q
    |||||||||||||||||  ||||||||| || ||| |||||| |||| || |||||| | ||||||| |||||||||||||   | |||||||| |||||    
T  2908882 gtattgggaaaaatccaagtcccacatcagatagacaagacttttgagaatagtttataaagaggaggcaatcctcaccttacaagccggttttgtaagg 2908783  T
Q  180 atgagttag 188  Q
    |||||||||    
T  2908782 atgagttag 2908774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 38 - 188
Target Start/End: Original strand, 15287004 - 15287152
Alignment:
Q  38 attcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agttta 136  Q
    ||||||||||||| |||||||||||||| ||||||| |||  |||||||||||||| |||  ||| | |||||| ||||||||||||||| ||  || ||    
T  15287004 attcacgcaccaa-gcccaaagagtgcttggcgtgagggg--tgtattgggaaaaacccaagtcctatatcggatagataagactcttgagaagggtata 15287100  T
Q  137 aatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
       ||||||| |||||||||||||   | |||||||| ||| ||||||||||    
T  15287101 ttaagaggaggcaatcctcaccttacaagccggttttgtaatgatgagttag 15287152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 82 - 188
Target Start/End: Original strand, 13413576 - 13413683
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaagga 180  Q
    |||||||||||| |||  |||||||||  | ||||||||||||||| || |||||| | ||||||| |||||||||||||   | |||||||| ||||||    
T  13413576 tattgggaaaaacccaagtcccacatcaaatagataagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaagga 13413675  T
Q  181 tgagttag 188  Q
    ||||||||    
T  13413676 tgagttag 13413683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 41 - 128
Target Start/End: Complemental strand, 18107629 - 18107544
Alignment:
Q  41 cacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgat 128  Q
    |||||||||| |||||||||||| |  |||||| ||| ||||||||||||||| |||  |||||||||||| ||||||||||||||||    
T  18107629 cacgcaccaa-gcccaaagagtgtttagcgtgacggg-gtgtattgggaaaaacccaagtcccacatcggatagataagactcttgat 18107544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 38 - 160
Target Start/End: Original strand, 28156189 - 28156309
Alignment:
Q  38 attcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agttta 136  Q
    ||||||||||||| |||||||||||||||||| ||| ||| ||||||||||||||| |||  ||||||||||||  |  || |||||||| || ||||||    
T  28156189 attcacgcaccaa-gcccaaagagtgctgggcatgagggg-gtgtattgggaaaaacccaagtcccacatcgga-tggcaaaactcttgagaagagttta 28156285  T
Q  137 aatagaggagacaatcctcacctt 160  Q
     | ||||||| |||||||||||||    
T  28156286 taaagaggaggcaatcctcacctt 28156309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 54 - 188
Target Start/End: Complemental strand, 37656871 - 37656737
Alignment:
Q  54 ccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatc 152  Q
    ||||| |||| ||||||||| ||| ||||||||| |||||  ||  || ||||||||| ||||||||||||||| || ||| || | ||||||| |||||    
T  37656871 ccaaacagtgttgggcgtgagggg-gtgtattggaaaaaactcaagtctcacatcggatagataagactcttgagaagagtatataaagaggaggcaatc 37656773  T
Q  153 ctcaccttctgaaccggttttttaaggatgagttag 188  Q
    ||||||||   | |||||||| ||||||||||||||    
T  37656772 ctcaccttacaagccggttttgtaaggatgagttag 37656737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 54 - 188
Target Start/End: Complemental strand, 37781984 - 37781849
Alignment:
Q  54 ccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatc 152  Q
    ||||| |||| ||||||||| ||| || ||||||||||||  ||  || ||||||||| ||||||||||||||| || ||| || | ||||||| |||||    
T  37781984 ccaaacagtgttgggcgtgaggggggtatattgggaaaaactcaagtctcacatcggatagataagactcttgagaagagtatataaagaggaggcaatc 37781885  T
Q  153 ctcaccttctgaaccggttttttaaggatgagttag 188  Q
    ||||||||   | | |||||| ||||||||||||||    
T  37781884 ctcaccttacaagctggttttgtaaggatgagttag 37781849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 38 - 120
Target Start/End: Complemental strand, 20720498 - 20720417
Alignment:
Q  38 attcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataaga 120  Q
    ||||||||||||| ||||||||||||||| |||||| ||| ||||||||| |||||| ||  |||||||| ||| ||||||||    
T  20720498 attcacgcaccaa-gcccaaagagtgctgagcgtgaggggggtgtattggaaaaaattcaagtcccacataggatagataaga 20720417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 60 - 188
Target Start/End: Original strand, 2716517 - 2716645
Alignment:
Q  60 agtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcacc 158  Q
    |||||||||||||| ||| ||||||||||||| | |||  ||||| || ||| | ||| |||||||||||| |||||| |  |||||| || ||||||||    
T  2716517 agtgctgggcgtgagggg-gtgtattgggaaatacccaagtcccagattggataaatatgactcttgataagagtttataaggaggaggcactcctcacc 2716615  T
Q  159 ttctgaaccggttttttaaggatgagttag 188  Q
    || | | |||||||| ||||||||||||||    
T  2716616 ttataagccggttttgtaaggatgagttag 2716645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 187
Target Start/End: Complemental strand, 36308014 - 36307929
Alignment:
Q  102 ccacatcggacagataagactcttgataaagtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagtta 187  Q
    |||||||||| ||||||||||||||| | |||||| | ||||||| |||||||||||||   | |||| ||| |||||||||||||    
T  36308014 ccacatcggatagataagactcttgaaagagtttataaagaggagtcaatcctcaccttgcaagccggatttgtaaggatgagtta 36307929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 100 - 188
Target Start/End: Original strand, 38131774 - 38131863
Alignment:
Q  100 tcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    |||||||||||| ||||| ||||||||| || |||||| | |||||||||| ||||||||||   | |||||||| ||||||||||||||    
T  38131774 tcccacatcggatagataggactcttgagaagagtttataaagaggagacattcctcaccttacaagccggttttgtaaggatgagttag 38131863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 82 - 165
Target Start/End: Original strand, 29008064 - 29008148
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttgata-aagtttaaatagaggagacaatcctcaccttctgaa 165  Q
    |||||||||||| |||| | |||||||||| |||||||||||||||||  |||||| |||||| || ||||||||| ||| ||||    
T  29008064 tattgggaaaaacccatgttccacatcggatagataagactcttgataggagtttatatagagaaggcaatcctcaacttatgaa 29008148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 82 - 188
Target Start/End: Complemental strand, 35527387 - 35527279
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactctt-gataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaagg 179  Q
    |||||||||||| |||  |||||||||||| || |||||||||| || || |||||| | ||||||| |||||||||||||   | |||||||| |||||    
T  35527387 tattgggaaaaacccaagtcccacatcggatagctaagactcttagagaagagtttacaaagaggaggcaatcctcaccttacaagccggttttgtaagg 35527288  T
Q  180 atgagttag 188  Q
    |||||||||    
T  35527287 atgagttag 35527279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 79 - 188
Target Start/End: Original strand, 30592418 - 30592526
Alignment:
Q  79 gtgtattgggaaaaatccatctcccacatcggacagataagactcttga-taaagtttaaatagaggagacaatcctcaccttctgaaccggttttttaa 177  Q
    |||||||||||||| ||||  || ||||||||| |||||||||||||||  ||||| || | ||||||| |||||||||||||   | |||||||||| |    
T  30592418 gtgtattgggaaaa-tccaagtctcacatcggatagataagactcttgagaaaagtatataaagaggag-caatcctcaccttacaagccggttttttga 30592515  T
Q  178 ggatgagttag 188  Q
    |||||||||||    
T  30592516 ggatgagttag 30592526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 84 - 130
Target Start/End: Original strand, 32501205 - 32501251
Alignment:
Q  84 ttgggaaaaatccatctcccacatcggacagataagactcttgataa 130  Q
    ||||||||||||||  |||||||||||| ||||||||||||||||||    
T  32501205 ttgggaaaaatccaagtcccacatcggatagataagactcttgataa 32501251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 159
Target Start/End: Original strand, 17135529 - 17135589
Alignment:
Q  100 tcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcacct 159  Q
    |||||||||||| | |||||||||||||||| |||||| | |||||||||| |||||||||    
T  17135529 tcccacatcggataaataagactcttgataagagtttataaagaggagacactcctcacct 17135589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 82 - 160
Target Start/End: Original strand, 10668352 - 10668431
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcacctt 160  Q
    |||||||||||| |||  |||||||||  | |||||| ||||||||||| |||||| | |||||||||| ||||||||||    
T  10668352 tattgggaaaaacccaagtcccacatcaaatagataaaactcttgataagagtttacaaagaggagacactcctcacctt 10668431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 82 - 160
Target Start/End: Complemental strand, 18914480 - 18914401
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttga-taaagtttaaatagaggagacaatcctcacctt 160  Q
    |||||||||||| |||  |||||||||||| ||  |||||||||||  |||||||| | | |||||||||||||||||||    
T  18914480 tattgggaaaaacccaagtcccacatcggatagtcaagactcttgagaaaagtttataaaaaggagacaatcctcacctt 18914401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 82 - 160
Target Start/End: Original strand, 36878318 - 36878397
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcacctt 160  Q
    |||||||||||| | |  ||||||||| || |||||||||| ||||||| |||||| | | |||||||||||||||||||    
T  36878318 tattgggaaaaaccaaagtcccacatcagatagataagacttttgataagagtttataaacaggagacaatcctcacctt 36878397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 102 - 187
Target Start/End: Complemental strand, 30870977 - 30870891
Alignment:
Q  102 ccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagtta 187  Q
    |||||||||| |||||||| |||||| || |||||| | ||||||  ||||||||||||| | | |||||||| ||||| |||||||    
T  30870977 ccacatcggatagataagattcttgagaagagtttataaagaggaagcaatcctcaccttataagccggttttataaggttgagtta 30870891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 188
Target Start/End: Complemental strand, 873790 - 873701
Alignment:
Q  100 tcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    |||||||||||| ||||| ||||||||| || |||||| | ||||||| || ||||||||||   | | |||||| ||||||||||||||    
T  873790 tcccacatcggatagataggactcttgagaagagtttatagagaggaggcattcctcaccttacaagcaggttttgtaaggatgagttag 873701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 188
Target Start/End: Complemental strand, 3015731 - 3015626
Alignment:
Q  84 ttgggaaaaatccatctcccacatcggacagataagactcttgat-aaagtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatg 182  Q
    |||||||||| |||  |||||||||||| |||| ||||||||||| | |||| | | ||||||| ||| |||||||||   | |||||||| ||||| ||    
T  3015731 ttgggaaaaacccaagtcccacatcggatagatgagactcttgatgagagttcataaagaggaggcaaccctcaccttgcaagccggttttgtaaggttg 3015632  T
Q  183 agttag 188  Q
    ||||||    
T  3015631 agttag 3015626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 127
Target Start/End: Original strand, 15286845 - 15286890
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttga 127  Q
    ||||||||||||||||  || ||||||||| |||||||||||||||    
T  15286845 tattgggaaaaatccaagtctcacatcggatagataagactcttga 15286890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 188
Target Start/End: Complemental strand, 22196647 - 22196558
Alignment:
Q  100 tcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    |||||||||||| ||||| ||||||||| || |||||| | |||||||||| || ||||| |   | |||||||| ||||||||||||||    
T  22196647 tcccacatcggatagatatgactcttgagaagagtttataaagaggagacactcatcaccgtacaagccggttttgtaaggatgagttag 22196558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 188
Target Start/End: Original strand, 24125052 - 24125161
Alignment:
Q  80 tgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaag 178  Q
    |||||||||||||| |||  ||| |||||||| | | ||||||||||| || ||| || | |||||||  ||||||||||||   | |||||||| ||||    
T  24125052 tgtattgggaaaaacccaagtcctacatcggataaacaagactcttgagaagagtatataaagaggaggtaatcctcaccttacaagccggttttgtaag 24125151  T
Q  179 gatgagttag 188  Q
    ||||||||||    
T  24125152 gatgagttag 24125161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 188
Target Start/End: Original strand, 34457106 - 34457195
Alignment:
Q  100 tcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    ||||| |||||| ||| ||||||||||| || |||||| | ||||||  |||||||||||||   | |||||||| ||||||||||||||    
T  34457106 tcccatatcggatagacaagactcttgagaagagtttataaagaggatgcaatcctcaccttacaagccggttttgtaaggatgagttag 34457195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 188
Target Start/End: Original strand, 36882410 - 36882447
Alignment:
Q  151 tcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    |||||||||| |||||||||||| ||||||||||||||    
T  36882410 tcctcaccttatgaaccggttttgtaaggatgagttag 36882447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 188
Target Start/End: Complemental strand, 37995728 - 37995639
Alignment:
Q  100 tcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    |||||||||||| |||||  |||||||| || |||||| | ||||||| || ||||||||||   | |||||||| ||||||||||||||    
T  37995728 tcccacatcggatagatagcactcttgagaagagtttataaagaggaggcattcctcaccttacaagccggttttgtaaggatgagttag 37995639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 188
Target Start/End: Complemental strand, 40169135 - 40169046
Alignment:
Q  100 tcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    ||||||||| || ||||||||||||||| || ||| || | ||||||| |||| ||||||||   | |||||||| ||||||||||||||    
T  40169135 tcccacatcagatagataagactcttgagaagagtatataaagaggaggcaattctcaccttacaagccggttttgtaaggatgagttag 40169046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 117 - 188
Target Start/End: Complemental strand, 48388 - 48316
Alignment:
Q  117 aagactcttgataaa-gtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    ||||||||||| ||| ||||| | ||||||| |||||||||||||   | |||||||| ||||||||||||||    
T  48388 aagactcttgagaaaagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttag 48316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 101; Significance: 6e-50; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 29 - 188
Target Start/End: Original strand, 5266298 - 5266458
Alignment:
Q  29 tgacggccgattcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgat 128  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| |||| ||||||||| || ||||||||||||||||    
T  5266298 tgacggccgattcacgcaccaaagcccaaagagtgttgggcgtgatgggggtgtattgggaaaaacccatgtcccacatcagatagataagactcttgat 5266397  T
Q  129 aa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    || || ||| ||||||||  ||||||||| ||| |||||||||||| ||||||||||||||    
T  5266398 aagagattatatagaggatccaatcctcaacttatgaaccggttttgtaaggatgagttag 5266458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 32 - 188
Target Start/End: Original strand, 29646005 - 29646162
Alignment:
Q  32 cggccgattcacgcaccaaa-gcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgata- 129  Q
    |||||||||||||||||||| |||||||||||| ||||| ||| ||| |||||||||||||||| ||| |||||||| ||| |||||||||||||||||     
T  29646005 cggccgattcacgcaccaaaagcccaaagagtgttgggcatgacgggggtgtattgggaaaaattcatgtcccacattggatagataagactcttgatag 29646104  T
Q  130 aagtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
     |||||| ||||||||| ||||||||||||| |||||||| ||||||||||||||||||    
T  29646105 gagtttatatagaggaggcaatcctcaccttatgaaccgg-tttttaaggatgagttag 29646162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 19 - 145
Target Start/End: Original strand, 23390520 - 23390646
Alignment:
Q  19 atgctgggcgtgacggccgattcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataa 118  Q
    |||||||||||| ||||| |||||||||||||||||||||||||| ||||||||| ||| ||||||||||||||| |||| |||||||||||| ||||||    
T  23390520 atgctgggcgtg-cggccaattcacgcaccaaagcccaaagagtgttgggcgtgacgggggtgtattgggaaaaacccatgtcccacatcggatagataa 23390618  T
Q  119 gactcttgataa-agtttaaatagagga 145  Q
    |||||||||||| |||||| ||||||||    
T  23390619 gactcttgataagagtttatatagagga 23390646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 23 - 188
Target Start/End: Original strand, 30768352 - 30768516
Alignment:
Q  23 tgggcgtgacggccgattcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagact 122  Q
    ||||||||||| | ||||||||||||||||||||||||||| ||||||||| ||| ||||||| |||||||  ||| |||||||||||| ||||||||||    
T  30768352 tgggcgtgacgactgattcacgcaccaaagcccaaagagtgttgggcgtgacggg-gtgtattaggaaaaactcatgtcccacatcggatagataagact 30768450  T
Q  123 cttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    |||||||| | |||| ||||||||||| ||||||||||  ||||  || ||||||||||||||||||    
T  30768451 cttgataataatttatatagaggagacgatcctcacctaatgaattgg-tttttaaggatgagttag 30768516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 34 - 174
Target Start/End: Original strand, 33834099 - 33834240
Alignment:
Q  34 gccgattcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-ag 132  Q
    |||||||||||  |||||||| |||||||| |  || |||  || |||||||||||||||||||| ||||||||| || |||||||||||||||||| ||    
T  33834099 gccgattcacgacccaaagccaaaagagtgttacgcatgacaggggtgtattgggaaaaatccatgtcccacatcagatagataagactcttgataagag 33834198  T
Q  133 tttaaatagaggagacaatcctcaccttctgaaccggttttt 174  Q
    |||| ||||||||||||||||||||||| |||||||||||||    
T  33834199 tttatatagaggagacaatcctcaccttatgaaccggttttt 33834240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 38 - 188
Target Start/End: Original strand, 6782987 - 6783137
Alignment:
Q  38 attcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agttta 136  Q
    ||||||||||||| |||||||||||||||||||||| ||| ||||||||||||||| |||  || ||||||||| ||||||||||||||| || ||||||    
T  6782987 attcacgcaccaa-gcccaaagagtgctgggcgtgaggggggtgtattgggaaaaacccaagtctcacatcggatagataagactcttgagaagagttta 6783085  T
Q  137 aatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
     | ||||||| |||||||||||||   | |||||||| ||||||||||||||    
T  6783086 taaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttag 6783137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 38 - 180
Target Start/End: Original strand, 9378949 - 9379091
Alignment:
Q  38 attcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agttta 136  Q
    ||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||| |||  | |||||||||| ||||||||||||||| || ||||||    
T  9378949 attcacgcaccaa-gcccaaagagtgctggacgtgaggggagtgtattgggaaaaacccaagttccacatcggatagataagactcttgagaagagttta 9379047  T
Q  137 aatagaggagacaatcctcaccttctgaaccggttttttaagga 180  Q
     | ||||||| |||||||||||||   |||||||||| ||||||    
T  9379048 taaagaggaggcaatcctcaccttacaaaccggttttgtaagga 9379091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 50 - 188
Target Start/End: Original strand, 16565059 - 16565197
Alignment:
Q  50 aagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagac 148  Q
    |||||||||||||| ||||||||| ||| ||||||||||||||| |||  |||||||||||| |||||||||||||||||| |||||| | | ||||| |    
T  16565059 aagcccaaagagtgttgggcgtgagggg-gtgtattgggaaaaacccaagtcccacatcggatagataagactcttgataagagtttataaataggaggc 16565157  T
Q  149 aatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    | |||||||||| ||||||| ||||||| |||||||||||    
T  16565158 actcctcaccttatgaaccgattttttacggatgagttag 16565197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 50 - 188
Target Start/End: Complemental strand, 16600603 - 16600465
Alignment:
Q  50 aagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagac 148  Q
    |||||||||||||| ||||||||| ||| ||||||||||||||| |||  |||||||||||| |||||||||||||||||| |||||| | | ||||| |    
T  16600603 aagcccaaagagtgttgggcgtgagggg-gtgtattgggaaaaacccaagtcccacatcggatagataagactcttgataagagtttataaataggaggc 16600505  T
Q  149 aatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    | |||||||||| ||||||| ||||||| |||||||||||    
T  16600504 actcctcaccttatgaaccgattttttacggatgagttag 16600465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 82 - 188
Target Start/End: Original strand, 33833942 - 33834048
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaagga 180  Q
    |||||| ||||| |||| |||||||||||| |||||||||||||||||| |||||| ||||||||||||||||||||||| |||||||| ||||||||||    
T  33833942 tattggaaaaaacccatgtcccacatcggatagataagactcttgataagagtttatatagaggagacaatcctcaccttatgaaccgg-tttttaagga 33834040  T
Q  181 tgagttag 188  Q
    ||||||||    
T  33834041 tgagttag 33834048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 81 - 188
Target Start/End: Complemental strand, 31357788 - 31357679
Alignment:
Q  81 gtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaa-ccggttttttaag 178  Q
    ||||||||||||| |||| |||||||||||| |||||||||||||||||| |||||| ||||||||||||||||||||||| |||| ||| |||| ||||    
T  31357788 gtattgggaaaaacccatgtcccacatcggatagataagactcttgataagagtttatatagaggagacaatcctcaccttatgaagccgattttgtaag 31357689  T
Q  179 gatgagttag 188  Q
    ||||||||||    
T  31357688 gatgagttag 31357679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 50 - 188
Target Start/End: Complemental strand, 4258143 - 4258005
Alignment:
Q  50 aagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagac 148  Q
    |||||||||||||| ||||||||| ||| ||||||||||||||| |||  || ||||||||| |||||||||||||||||| ||||||   | ||||| |    
T  4258143 aagcccaaagagtgttgggcgtgagggg-gtgtattgggaaaaacccaagtctcacatcggatagataagactcttgataagagtttatcaataggaggc 4258045  T
Q  149 aatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    | |||||||||| |||||| ||||||||||||||||||||    
T  4258044 actcctcaccttatgaaccagttttttaaggatgagttag 4258005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 56 - 188
Target Start/End: Original strand, 33855658 - 33855790
Alignment:
Q  56 aaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcct 154  Q
    |||||||| |||| |||| ||| ||||||||||||||| |||  |||||||||||| ||||||||||| |||||| |||||| | |||||||||| ||||    
T  33855658 aaagagtgatgggtgtgagggg-gtgtattgggaaaaacccaagtcccacatcggatagataagactcatgataatagtttataaagaggagacactcct 33855756  T
Q  155 caccttctgaaccggttttttaaggatgagttag 188  Q
    |||||| |||||||||||| |||| |||||||||    
T  33855757 caccttatgaaccggttttgtaagaatgagttag 33855790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 35 - 156
Target Start/End: Complemental strand, 10903438 - 10903314
Alignment:
Q  35 ccgattcacgcaccaaagcccaaagagtgctg---ggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgataa- 130  Q
    |||||||||||| ||| |||||||||||||||   ||||||| ||| |||||||||||||||  ||| |||||||||||| ||||||||||||||||||     
T  10903438 ccgattcacgcatcaa-gcccaaagagtgctgctaggcgtgacgggggtgtattgggaaaaacacatgtcccacatcggatagataagactcttgataag 10903340  T
Q  131 agtttaaatagaggagacaatcctca 156  Q
    |||||| ||||||||| |||||||||    
T  10903339 agtttatatagaggaggcaatcctca 10903314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 82 - 188
Target Start/End: Original strand, 16564886 - 16564993
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaagga 180  Q
    |||||||||||| |||  |||||||||||| ||||||||||||| |||| |||||| | | ||||| || |||||||||| |||||||||||||||||||    
T  16564886 tattgggaaaaacccaagtcccacatcggatagataagactcttaataagagtttataaataggaggcactcctcaccttatgaaccggttttttaagga 16564985  T
Q  181 tgagttag 188  Q
    ||||||||    
T  16564986 tgagttag 16564993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 82 - 188
Target Start/End: Complemental strand, 16600776 - 16600669
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaagga 180  Q
    |||||||||||| |||  |||||||||||| ||||||||||||| |||| |||||| | | ||||| || |||||||||| |||||||||||||||||||    
T  16600776 tattgggaaaaacccaagtcccacatcggatagataagactcttaataagagtttataaataggaggcactcctcaccttatgaaccggttttttaagga 16600677  T
Q  181 tgagttag 188  Q
    ||||||||    
T  16600676 tgagttag 16600669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 38 - 159
Target Start/End: Complemental strand, 6751660 - 6751539
Alignment:
Q  38 attcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgat-aaagttta 136  Q
    ||||||||||||| |||||||||||||||||||||| ||| ||||||||||||||| |||  ||||| |||||| |||| ||||||||||| | ||||||    
T  6751660 attcacgcaccaa-gcccaaagagtgctgggcgtgaggggggtgtattgggaaaaacccaagtcccaaatcggatagatgagactcttgatgagagttta 6751562  T
Q  137 aatagaggagacaatcctcacct 159  Q
     | ||||||| || |||||||||    
T  6751561 caaagaggaggcactcctcacct 6751539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 113 - 188
Target Start/End: Complemental strand, 7833044 - 7832968
Alignment:
Q  113 agataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    |||||||||||||||||  |||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  7833044 agataagactcttgataggagtttatatagaggaggcaatcctcaccttatgaaccggttttttaaggatgagttag 7832968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 28 - 131
Target Start/End: Original strand, 42068558 - 42068661
Alignment:
Q  28 gtgacggccgattcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttga 127  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||  ||| ||||||||||||||   ||| ||||| || ||| |||||||||| ||||    
T  42068558 gtgacggccgattcacgcaccaaagcccagagagtgatgggcgtggcgggcgtgtattgggaaaagctcatgtcccaaattggatagataagacttttga 42068657  T
Q  128 taaa 131  Q
    ||||    
T  42068658 taaa 42068661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 82 - 188
Target Start/End: Complemental strand, 38948525 - 38948419
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaagga 180  Q
    ||||||||||||  ||| |||||||||||| ||||||||||||| |||| |||||| |||||||||||||| |||||||| ||||   | ||||||||||    
T  38948525 tattgggaaaaaatcatgtcccacatcggaaagataagactctttataagagtttatatagaggagacaattctcaccttgtgaa-ttgatttttaagga 38948427  T
Q  181 tgagttag 188  Q
    ||||||||    
T  38948426 tgagttag 38948419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 80 - 188
Target Start/End: Complemental strand, 4258318 - 4258209
Alignment:
Q  80 tgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaag 178  Q
    ||||||||||||||  ||  |||||||||||| |||||||||||||||||| ||||||   | ||||| || |||||||||| |||||||| ||||||||    
T  4258318 tgtattgggaaaaactcaagtcccacatcggatagataagactcttgataagagtttaccaataggaggcactcctcaccttatgaaccggctttttaag 4258219  T
Q  179 gatgagttag 188  Q
    ||||| ||||    
T  4258218 gatgaattag 4258209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 82 - 188
Target Start/End: Original strand, 22841044 - 22841152
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcacctt-ctgaaccggttttttaagg 179  Q
    |||||||||||| ||||  || |||||||| |||||||||||||| ||| |||||| |||||||||||||||||||||||  |||||| ||||| |||||    
T  22841044 tattgggaaaaacccatgccctacatcggatagataagactcttggtaagagtttatatagaggagacaatcctcaccttattgaacctgttttgtaagg 22841143  T
Q  180 atgagttag 188  Q
      |||||||    
T  22841144 tagagttag 22841152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 38 - 159
Target Start/End: Original strand, 2232044 - 2232166
Alignment:
Q  38 attcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatc-catctcccacatcggacagataagactcttgataa-agttt 135  Q
    |||||||||||||| ||||||||||| ||||||| | ||| ||||||||| ||||| | ||  |||  ||||||| |||||| ||||||||||| |||||    
T  2232044 attcacgcaccaaa-cccaaagagtgttgggcgttaggggggtgtattggaaaaaacctcaagtcctgcatcggatagataaaactcttgataagagttt 2232142  T
Q  136 aaatagaggagacaatcctcacct 159  Q
    | ||||||||| ||||||||||||    
T  2232143 atatagaggaggcaatcctcacct 2232166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 82 - 156
Target Start/End: Complemental strand, 10903596 - 10903521
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctca 156  Q
    ||||||||||||  ||| |||||||||||| |||||||||||||||||| |||||| ||||||||| |||||||||    
T  10903596 tattgggaaaaactcatgtcccacatcggatagataagactcttgataagagtttatatagaggaggcaatcctca 10903521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 38 - 188
Target Start/End: Original strand, 23396765 - 23396913
Alignment:
Q  38 attcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agttta 136  Q
    ||||||||||||| |||||||||||| ||||||||| ||| |||||||||| ||||||||  ||||||| |  | |||||||||||||||||| ||| ||    
T  23396765 attcacgcaccaa-gcccaaagagtgttgggcgtga-gggggtgtattggg-aaaatccaagtcccacaacatatagataagactcttgataagagtata 23396861  T
Q  137 aatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
     | ||||||| ||||| ||| |||   | |||||||| ||||||||||||||    
T  23396862 taaagaggaggcaatcatcaacttacaagccggttttgtaaggatgagttag 23396913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 82 - 188
Target Start/End: Complemental strand, 35866751 - 35866644
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaagga 180  Q
    |||||||||||| |||  |||||||||||| |||||||||||||||||| |||||| ||||||| | |||| |||| |||   | |||||||| ||||||    
T  35866751 tattgggaaaaacccaagtcccacatcggatagataagactcttgataagagtttatatagagggggcaatactcaacttacaagccggttttgtaagga 35866652  T
Q  181 tgagttag 188  Q
    ||||||||    
T  35866651 tgagttag 35866644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 50 - 188
Target Start/End: Original strand, 48113958 - 48114096
Alignment:
Q  50 aagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagac 148  Q
    ||||||||| |||| ||||||||| ||| |||||||||||| || |||  |||||||||||| |||||||||||||||||| |||||| | ||||||  |    
T  48113958 aagcccaaa-agtgttgggcgtgaggggggtgtattgggaataacccaagtcccacatcggatagataagactcttgataagagtttataaagaggaagc 48114056  T
Q  149 aatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    | |||  | ||| |||||||||| | |||| |||||||||    
T  48114057 actccaaatcttatgaaccggttgtgtaagaatgagttag 48114096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 23 - 93
Target Start/End: Complemental strand, 7832884 - 7832814
Alignment:
Q  23 tgggcgtgacggccgattcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaa 93  Q
    |||||||||||||| |||||| ||||||||| ||||||||||| ||||||| ||| ||||||||| |||||    
T  7832884 tgggcgtgacggccaattcacacaccaaagcgcaaagagtgctcggcgtgacgggggtgtattggaaaaaa 7832814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 103 - 184
Target Start/End: Original strand, 29645828 - 29645909
Alignment:
Q  103 cacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgag 184  Q
    ||||||||| |||||||||||||||||  |||||| ||| ||||| ||||||||||||| |||||||| ||||||||||||||    
T  29645828 cacatcggatagataagactcttgatatgagtttatataaaggaggcaatcctcaccttatgaaccgg-tttttaaggatgag 29645909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 82 - 160
Target Start/End: Original strand, 2179646 - 2179726
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttgataa--agtttaaatagaggagacaatcctcacctt 160  Q
    ||||||||||||| ||  |||||||||||| ||||||||||||||| ||  |||||| | |||||||||||||||||||||    
T  2179646 tattgggaaaaattcaagtcccacatcggatagataagactcttgagaaagagtttataaagaggagacaatcctcacctt 2179726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 38 - 156
Target Start/End: Complemental strand, 6813233 - 6813115
Alignment:
Q  38 attcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgat-aaagttta 136  Q
    ||||||||||||| |||||||||||||||||| ||| ||| |||| ||||||||||  ||  |||||||||||| ||||  |||||||||| | ||||||    
T  6813233 attcacgcaccaa-gcccaaagagtgctgggcatgaagggggtgtgttgggaaaaacacaagtcccacatcggatagatgggactcttgatgagagttta 6813135  T
Q  137 aatagaggagacaatcctca 156  Q
     | ||||||| || ||||||    
T  6813134 taaagaggaggcactcctca 6813115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 82 - 188
Target Start/End: Original strand, 23396601 - 23396708
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaagga 180  Q
    ||||||||||||||||  ||||||| |||| ||||||||||||||| || ||| || | ||| ||| |||||||||||||   | |||||||| ||||||    
T  23396601 tattgggaaaaatccaagtcccacaacggatagataagactcttgagaagagtatataaagatgaggcaatcctcaccttacaagccggttttgtaagga 23396700  T
Q  181 tgagttag 188  Q
    ||||||||    
T  23396701 tgagttag 23396708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 38 - 188
Target Start/End: Complemental strand, 40703807 - 40703657
Alignment:
Q  38 attcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgat-aaagttta 136  Q
    ||||||||||||| |||||||||||| |||| |||| ||  |||||||| |||||| |||  |||||||||| | | || ||||||||||| | | ||||    
T  40703807 attcacgcaccaa-gcccaaagagtgttgggtgtgacggaggtgtattgagaaaaaaccaagtcccacatcgaataaatgagactcttgatgagacttta 40703709  T
Q  137 aatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
     | |||||||||| |||||||||    | |||||||| ||||||||||||||    
T  40703708 taaagaggagacactcctcacctcacaagccggttttgtaaggatgagttag 40703657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 35 - 93
Target Start/End: Original strand, 258580 - 258637
Alignment:
Q  35 ccgattcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaa 93  Q
    |||||||||||||||| |||||||||||| ||||||||| ||| |||||||||||||||    
T  258580 ccgattcacgcaccaa-gcccaaagagtgttgggcgtgacgggggtgtattgggaaaaa 258637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 82 - 188
Target Start/End: Original strand, 33855473 - 33855584
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaat----cctcaccttctgaaccggtttttta 176  Q
    |||||||||||| |||  ||||| |||||| ||||||||||| |||||| |||||| | |||||||||| |    ||||||||| ||||||| |||| ||    
T  33855473 tattgggaaaaacccaagtcccatatcggatagataagactcgtgataatagtttataaagaggagacactcctccctcaccttatgaaccgcttttgta 33855572  T
Q  177 aggatgagttag 188  Q
    ||||||||||||    
T  33855573 aggatgagttag 33855584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 88 - 188
Target Start/End: Original strand, 31374763 - 31374864
Alignment:
Q  88 gaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagtt 186  Q
    ||||||||||  ||| |||||||| |||||||||| |||| || |||||| | ||||||| |||||||||||||   | |||||||| ||||||||||||    
T  31374763 gaaaaatccaagtcctacatcggatagataagactattgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagtt 31374862  T
Q  187 ag 188  Q
    ||    
T  31374863 ag 31374864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 116 - 187
Target Start/End: Original strand, 34590554 - 34590626
Alignment:
Q  116 taagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagtta 187  Q
    |||||||||| |||| |||||| | ||||||| || |||||||||| |||||||||||| |||||||||||||    
T  34590554 taagactcttcataagagtttataaagaggaggcactcctcaccttatgaaccggttttgtaaggatgagtta 34590626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 100 - 187
Target Start/End: Complemental strand, 43167987 - 43167899
Alignment:
Q  100 tcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagtta 187  Q
    ||||| |||||| |||||  |||||||| || |||||| | ||||||| ||||||||||||| ||| |||||||| |||||||||||||    
T  43167987 tcccaaatcggatagatagcactcttgagaagagtttataaagaggaggcaatcctcaccttatgagccggttttgtaaggatgagtta 43167899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 38 - 149
Target Start/End: Original strand, 43366357 - 43366467
Alignment:
Q  38 attcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgat-aaagttta 136  Q
    |||||||||||||| || | |||||| ||||||||| |||||||||||||||||||||||  |||||||||| |  ||  ||||||||||| | ||||||    
T  43366357 attcacgcaccaaatcc-agagagtgttgggcgtga-gggagtgtattgggaaaaatccaaatcccacatcgaattgacgagactcttgatgagagttta 43366454  T
Q  137 aatagaggagaca 149  Q
     | ||||||||||    
T  43366455 taaagaggagaca 43366467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 82 - 160
Target Start/End: Original strand, 6782818 - 6782897
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcacctt 160  Q
    |||||||||||| |||  || ||||||||| ||||||||||||||| || |||||| | ||||||| |||||||||||||    
T  6782818 tattgggaaaaacccaagtctcacatcggatagataagactcttgagaagagtttataaagaggaggcaatcctcacctt 6782897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 82 - 188
Target Start/End: Original strand, 9378785 - 9378892
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaagga 180  Q
    |||||||||||| |||  |||||||||| | ||||||||||||||| || |||||| | ||||||| |||||||  ||||   | |||||||| ||||||    
T  9378785 tattgggaaaaacccaagtcccacatcgaatagataagactcttgagaagagtttataaagaggaggcaatccttgccttacaagccggttttgtaagga 9378884  T
Q  181 tgagttag 188  Q
    ||||||||    
T  9378885 tgagttag 9378892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 50 - 159
Target Start/End: Complemental strand, 13310362 - 13310251
Alignment:
Q  50 aagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agt---ttaaatagagga 145  Q
    ||||||||||||| |||||||||| ||| |||||||||  ||||| ||  |||| ||||||| |||||||||||||||||| |||   ||| ||||||||    
T  13310362 aagcccaaagagtactgggcgtgagggg-gtgtattggttaaaatgcaagtccc-catcggatagataagactcttgataagagtttattatatagagga 13310265  T
Q  146 gacaatcctcacct 159  Q
    | ||||||||||||    
T  13310264 ggcaatcctcacct 13310251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 50 - 125
Target Start/End: Complemental strand, 23821615 - 23821540
Alignment:
Q  50 aagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactctt 125  Q
    |||| ||||||||||||||||||| ||  ||||||||||||||| |||  |||||||| ||| |||| ||||||||    
T  23821615 aagctcaaagagtgctgggcgtgagggaggtgtattgggaaaaacccaagtcccacataggatagatgagactctt 23821540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 82 - 160
Target Start/End: Original strand, 29252568 - 29252647
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcacctt 160  Q
    |||||||||||| |||  |||||| ||||| ||||||||||||||| || |||||| | ||||||| |||||||||||||    
T  29252568 tattgggaaaaacccaagtcccacgtcggatagataagactcttgagaagagtttataaagaggaggcaatcctcacctt 29252647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 82 - 160
Target Start/End: Complemental strand, 39808709 - 39808630
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcacctt 160  Q
    |||||||||||| |||  |||||||||||| ||| ||||||||||| || |||||| | ||||||| |||||||||||||    
T  39808709 tattgggaaaaacccaagtcccacatcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcacctt 39808630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 100 - 189
Target Start/End: Complemental strand, 37272139 - 37272049
Alignment:
Q  100 tcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttagt 189  Q
    |||||||||||  ||||| |||||||||||| |||||| | ||||||| || ||||||||||   | |||||||| |||||||||||||||    
T  37272139 tcccacatcggttagataggactcttgataagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttagt 37272049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 100 - 188
Target Start/End: Complemental strand, 47856085 - 47855996
Alignment:
Q  100 tcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    |||||||||||| |||||||||||||||||| |||||| | ||||||| || ||| |||||| ||| ||| |||| |||| || ||||||    
T  47856085 tcccacatcggatagataagactcttgataagagtttataaagaggaggcactccccaccttatgagccgattttgtaagcatcagttag 47855996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 188
Target Start/End: Complemental strand, 24377957 - 24377850
Alignment:
Q  81 gtattgggaaaaatccatctcccacatcggacagataagactcttgata-aagtttaaatagaggagacaatcctcaccttctgaaccggttttttaagg 179  Q
    |||||||||||||  ||| |||| ||||||| |||||| ||| ||||||  |||||| ||||| ||||||||||||| |||  ||| | | |||||||||    
T  24377957 gtattgggaaaaactcatgtcccgcatcggatagataaaacttttgataggagtttatatagatgagacaatcctcatcttacgaatcag-tttttaagg 24377859  T
Q  180 atgagttag 188  Q
    |||||||||    
T  24377858 atgagttag 24377850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 54 - 160
Target Start/End: Complemental strand, 36492681 - 36492576
Alignment:
Q  54 ccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgat-aaagtttaaatagaggagacaatc 152  Q
    |||||||||| |||| |||| ||||||||||||||||||| |||  |||||||  | | ||||| |||||||||| |||||||| | ||||||| || ||    
T  36492681 ccaaagagtgttgggtgtga-gggagtgtattgggaaaaaccca-atcccacaatgaatagataggactcttgataaaagtttataaagaggaggcactc 36492584  T
Q  153 ctcacctt 160  Q
    ||||||||    
T  36492583 ctcacctt 36492576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 156
Target Start/End: Original strand, 49040579 - 49040633
Alignment:
Q  103 cacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctca 156  Q
    ||||||||| |||||||||||||||||| |||||| ||||||||||  |||||||    
T  49040579 cacatcggatagataagactcttgataagagtttatatagaggagaatatcctca 49040633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 188
Target Start/End: Complemental strand, 1661285 - 1661196
Alignment:
Q  100 tcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    |||||||||||| |||||| |||||||| || |||||| | ||||||| || ||||||||||   | |||||||| |||| |||||||||    
T  1661285 tcccacatcggatagataaaactcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaagaatgagttag 1661196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 188
Target Start/End: Complemental strand, 43384374 - 43384285
Alignment:
Q  100 tcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    |||||||||||| ||||| || |||||| || |||||| | ||||||| || ||||||||||   | |||||||| ||||||||||||||    
T  43384374 tcccacatcggatagataggattcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttag 43384285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 105 - 188
Target Start/End: Complemental strand, 39808553 - 39808469
Alignment:
Q  105 catcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    ||||||| ||| ||||||||||| || |||||| | ||||||| |||||||||||||   | |||||||| | ||||||||||||    
T  39808553 catcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcaccttaaaagccggttttgtgaggatgagttag 39808469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 101 - 188
Target Start/End: Complemental strand, 40137789 - 40137701
Alignment:
Q  101 cccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    ||||||| ||| ||| | ||||||| |||| |||||| | ||| |||||| ||||||||||  || |||||||| ||||||||||||||    
T  40137789 cccacattggatagacaggactcttaataagagtttataaagaagagacactcctcaccttacgagccggttttgtaaggatgagttag 40137701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 100 - 159
Target Start/End: Complemental strand, 40703953 - 40703893
Alignment:
Q  100 tcccacatcggacagataagactcttgat-aaagtttaaatagaggagacaatcctcacct 159  Q
    |||||||||||| |||| ||||||||||| | |||||| | |||||||||| |||||||||    
T  40703953 tcccacatcggatagatgagactcttgatgagagtttataaagaggagacactcctcacct 40703893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 100; Significance: 2e-49; HSPs: 74)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 20 - 186
Target Start/End: Original strand, 40926960 - 40927126
Alignment:
Q  20 tgctgggcgtgacggccgattcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataag 119  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||  ||||| ||||||||||||| |||||||||||| |||||||    
T  40926960 tgctgggcgtgacggccgattcacgcaccaaagcccaaagagtgatgggcttgacggggttgtatcgggaaaaatccatgtcccacatcggatagataag 40927059  T
Q  120 actcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagtt 186  Q
    ||||||||||| |||||| ||||||||||||||||||| ||| |||||  | ||||||||||||||||    
T  40927060 actcttgataagagtttatatagaggagacaatcctcatcttatgaactag-tttttaaggatgagtt 40927126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 20 - 167
Target Start/End: Original strand, 40926633 - 40926781
Alignment:
Q  20 tgctgggcgtgacggccgattcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataag 119  Q
    |||||||||||||||||||||||||||||||| | ||||||||| |||||||||  ||  |||||||| ||||||| || |||||||||||| |||||||    
T  40926633 tgctgggcgtgacggccgattcacgcaccaaaacacaaagagtgatgggcgtgacagggttgtattggaaaaaatcaatgtcccacatcggatagataag 40926732  T
Q  120 actcttgataa-agtttaaatagaggagacaatcctcaccttctgaacc 167  Q
    ||||||||||| |||||| |||||||||||||||||| |||| ||||||    
T  40926733 actcttgataagagtttatatagaggagacaatcctctccttatgaacc 40926781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 20 - 190
Target Start/End: Complemental strand, 19984338 - 19984173
Alignment:
Q  20 tgctgggcgtgacggccgattcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataag 119  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| ||| ||| ||||||||||||||||     |||||||||||| |||||||    
T  19984338 tgctgggcgtgacggccgattcacgcaccaaagcccaaagagtgttgggcatgacgggggtgtattgggaaaaatg----tcccacatcggatagataag 19984243  T
Q  120 actcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttagtc 190  Q
    ||||||| ||| || ||| ||||  ||| ||||||||||| | |||||||  ||||||||||||||||||||    
T  19984242 actcttggtaagagcttatataggtgaggcaatcctcaccatatgaaccg--tttttaaggatgagttagtc 19984173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 20 - 160
Target Start/End: Complemental strand, 25578855 - 25578714
Alignment:
Q  20 tgctgggcgtgacggccgattcacgcaccaaagcccaaagagtgctgggcgtgatgggag-tgtattgggaaaaatccatctcccacatcggacagataa 118  Q
    ||||||||||| ||||||||||||||||||||||||||| |||| | ||||||| ||| | |||||||||||||| |||| |||||||||||| ||||||    
T  25578855 tgctgggcgtgtcggccgattcacgcaccaaagcccaaaaagtgttcggcgtgacgggggatgtattgggaaaaacccatgtcccacatcggatagataa 25578756  T
Q  119 gactcttgataa-agtttaaatagaggagacaatcctcacctt 160  Q
    |||| ||||||| |||||| ||||||||||||||| |||||||    
T  25578755 gact-ttgataagagtttatatagaggagacaatcttcacctt 25578714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 38 - 188
Target Start/End: Complemental strand, 9264241 - 9264091
Alignment:
Q  38 attcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agttta 136  Q
    ||||||||||||| |||||||||||||||||||||| ||| ||||||||||||||| |||  |||||||||||| ||||||||||||||| || ||| ||    
T  9264241 attcacgcaccaa-gcccaaagagtgctgggcgtgaggggggtgtattgggaaaaacccaagtcccacatcggatagataagactcttgagaagagtata 9264143  T
Q  137 aatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
     | ||||||| |||||||||||||   | |||||||| ||||||||||||||    
T  9264142 taaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttag 9264091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 38 - 188
Target Start/End: Original strand, 49477483 - 49477633
Alignment:
Q  38 attcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agttta 136  Q
    ||||||||||||| |||||||||||||||||||||| ||| |||| |||||||||| |||  |||||||||||| ||||||||||||||| || ||||||    
T  49477483 attcacgcaccaa-gcccaaagagtgctgggcgtgaggggggtgtgttgggaaaaacccaagtcccacatcggatagataagactcttgagaagagttta 49477581  T
Q  137 aatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
     | ||||||| |||||||||||||   | |||||||| ||||||||||||||    
T  49477582 taaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttag 49477633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 38 - 188
Target Start/End: Original strand, 50692475 - 50692625
Alignment:
Q  38 attcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agttta 136  Q
    ||||||||||||  |||||||||||||||||||||| ||| ||||||||||||||| |||  |||||||||||| ||| |||||||||||||| ||||||    
T  50692475 attcacgcaccag-gcccaaagagtgctgggcgtgaggggggtgtattgggaaaaacccaagtcccacatcggatagacaagactcttgataagagttta 50692573  T
Q  137 aatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
     | ||||||| |||||||||||||   | |||||||| ||||||||||||||    
T  50692574 taaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttag 50692625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 33 - 174
Target Start/End: Complemental strand, 32516067 - 32515926
Alignment:
Q  33 ggccgattcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgata-aa 131  Q
    |||||||||||||||||||||||||||||||||||| |||| ||| |||||| ||||||| | ||| |||||||||||| |||||||||||||||||  |    
T  32516067 ggccgattcacgcaccaaagcccaaagagtgctgggtgtgacgggtgtgtatagggaaaact-catgtcccacatcggatagataagactcttgatagga 32515969  T
Q  132 gtttaaatagaggagacaatcctcaccttctgaaccggttttt 174  Q
    ||||| |||||||||| |||| ||||  | |||||||||||||    
T  32515968 gtttatatagaggagataatcatcactatatgaaccggttttt 32515926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 38 - 188
Target Start/End: Complemental strand, 9264448 - 9264298
Alignment:
Q  38 attcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agttta 136  Q
    ||||||||||||| ||||||||| |||||||||||| ||| |||||||||||||||||||  |||||||||||| ||| ||||||||||| || ||| ||    
T  9264448 attcacgcaccaa-gcccaaagactgctgggcgtgaggggggtgtattgggaaaaatccaagtcccacatcggatagacaagactcttgagaagagtata 9264350  T
Q  137 aatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
     | ||||||| |||||||||||||   | |||||||| ||||||||||||||    
T  9264349 taaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttag 9264298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 38 - 160
Target Start/End: Original strand, 42258859 - 42258981
Alignment:
Q  38 attcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agttta 136  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||| |||||||| |||||| || ||| ||    
T  42258859 attcacgcaccaa-gcccaaagagtgctgggcgtgatgggggtgtattgggaaaaatccaagtcccacatcggatagataagattcttgagaagagtata 42258957  T
Q  137 aatagaggagacaatcctcacctt 160  Q
     | ||||||| |||||||||||||    
T  42258958 taaagaggaggcaatcctcacctt 42258981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 35 - 186
Target Start/End: Original strand, 35015431 - 35015582
Alignment:
Q  35 ccgattcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgat-aaagt 133  Q
    |||||||||| ||||  |||||||||||||||||||||| ||| ||||||||||||||| |||  |||||||||||| |||||| ||||||||| |||||    
T  35015431 ccgattcacgtaccag-gcccaaagagtgctgggcgtgaggggggtgtattgggaaaaagccaagtcccacatcggatagataaaactcttgataaaagt 35015529  T
Q  134 ttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagtt 186  Q
    ||| | ||||||| |||||||||| || | | |||||||| |||| |||||||    
T  35015530 ttataaagaggaggcaatcctcactttataagccggttttgtaagtatgagtt 35015582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 20 - 174
Target Start/End: Original strand, 44367709 - 44367863
Alignment:
Q  20 tgctgggcgtgacggccgattcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataag 119  Q
    |||||||||||||||||||| ||||||||||| | ||||||||| ||||||| | ||| |||||||||| ||||  | | |||| | ||||| ||||||     
T  44367709 tgctgggcgtgacggccgatccacgcaccaaaactcaaagagtgatgggcgtaacggg-gtgtattgggtaaaactcttgtccctcgtcggatagataaa 44367807  T
Q  120 actcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttt 174  Q
    ||||||||||| |||||| ||||||||| ||||||||||||| |||||| ||||||    
T  44367808 actcttgataagagtttatatagaggaggcaatcctcaccttatgaaccagttttt 44367863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 87 - 188
Target Start/End: Original strand, 26926904 - 26927005
Alignment:
Q  87 ggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagt 185  Q
    ||||||| |||| ||||||||| || |||||||||||||||||| |||||| ||||||||||||||||||||||| |||||||| |||||||||||||||    
T  26926904 ggaaaaaaccatgtcccacatcagatagataagactcttgataagagtttatatagaggagacaatcctcaccttatgaaccgg-tttttaaggatgagt 26927002  T
Q  186 tag 188  Q
    |||    
T  26927003 tag 26927005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 20 - 120
Target Start/End: Complemental strand, 19984576 - 19984475
Alignment:
Q  20 tgctgggcgtgacggccgattcacgcaccaaa-gcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataa 118  Q
    ||||||||||||||| |||||||||||||||| ||||||||||||||||| |||| ||| |||||||||||||||  ||| |||||||||||| ||||||    
T  19984576 tgctgggcgtgacgggcgattcacgcaccaaaagcccaaagagtgctgggtgtgacgggggtgtattgggaaaaactcatgtcccacatcggatagataa 19984477  T
Q  119 ga 120  Q
    ||    
T  19984476 ga 19984475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 57 - 188
Target Start/End: Original strand, 35011831 - 35011963
Alignment:
Q  57 aagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctc 155  Q
    ||||| ||||||||||| ||| ||||||||||||||| |||  |||||||| |   |||||||||||||||||| |||||| | ||||||| || |||||    
T  35011831 aagagagctgggcgtgaggggggtgtattgggaaaaacccaagtcccacattgagtagataagactcttgataagagtttataaagaggaggcactcctc 35011930  T
Q  156 accttctgaaccggttttttaaggatgagttag 188  Q
    ||||| |||||||||||| ||||||||||||||    
T  35011931 accttatgaaccggttttgtaaggatgagttag 35011963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 38 - 160
Target Start/End: Complemental strand, 39956622 - 39956500
Alignment:
Q  38 attcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agttta 136  Q
    ||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||  ||||||||| || ||| |||| |||| | || ||||||    
T  39956622 attcacgcaccaa-gcccaaagagtgctgggcgtgaggggggtgtattgggaaaaatccaagtcccacatcagatagacaagaatcttaagaagagttta 39956524  T
Q  137 aatagaggagacaatcctcacctt 160  Q
     | |||||||||||||||||||||    
T  39956523 taaagaggagacaatcctcacctt 39956500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 82 - 188
Target Start/End: Original strand, 40926446 - 40926552
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaagga 180  Q
    ||||||||||||  ||| |||||||||||| |||||||||||||||||| |||||| |||||||||||||||||| ||||  ||||||| ||||||||||    
T  40926446 tattgggaaaaacacatgtcccacatcggatagataagactcttgataagagtttatatagaggagacaatcctctccttaagaaccgg-tttttaagga 40926544  T
Q  181 tgagttag 188  Q
    ||||||||    
T  40926545 tgagttag 40926552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 38 - 188
Target Start/End: Complemental strand, 51642583 - 51642433
Alignment:
Q  38 attcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agttta 136  Q
    ||||||||||||| |||||||||||||||||||||| ||| |||||||| |||||| |||  |||||| | ||| ||||||||||||||| || ||| ||    
T  51642583 attcacgcaccaa-gcccaaagagtgctgggcgtgaggggggtgtattgcgaaaaacccaagtcccacgttggatagataagactcttgagaagagtata 51642485  T
Q  137 aatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
     | ||||||| |||||||||||||   | |||||||| ||||||||||||||    
T  51642484 taaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttag 51642433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 35 - 125
Target Start/End: Original strand, 32034241 - 32034331
Alignment:
Q  35 ccgattcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactctt 125  Q
    |||||||||||||| |||||||||||||||||||||||| ||| ||||||| ||||||| | || |||||||||||| |||||||||||||    
T  32034241 ccgattcacgcaccgaagcccaaagagtgctgggcgtgacgggggtgtattaggaaaaacctatgtcccacatcggatagataagactctt 32034331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 88 - 188
Target Start/End: Original strand, 39269498 - 39269598
Alignment:
Q  88 gaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagtt 186  Q
    ||||||||||| |||||||||||| |||||||||||||||||| |||||| ||||||||||||||||||| ||| ||||| || ||||||| ||||||||    
T  39269498 gaaaaatccatgtcccacatcggatagataagactcttgataagagtttatatagaggagacaatcctcaacttatgaactgg-tttttaaagatgagtt 39269596  T
Q  187 ag 188  Q
    ||    
T  39269597 ag 39269598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 82 - 188
Target Start/End: Original strand, 32034083 - 32034189
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaagga 180  Q
    ||||||||||||  ||| |||||||||| | |||||||||||||||||| |||||| | | ||||||||||||||||||| |||||||| ||||||||||    
T  32034083 tattgggaaaaactcatgtcccacatcgaatagataagactcttgataagagtttatacaaaggagacaatcctcaccttatgaaccgg-tttttaagga 32034181  T
Q  181 tgagttag 188  Q
    ||||||||    
T  32034182 tgagttag 32034189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 38 - 188
Target Start/End: Complemental strand, 40230589 - 40230440
Alignment:
Q  38 attcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgat-aaagttta 136  Q
    ||||||||||||| |||||||||||| ||||||| | ||| ||||||||||||||| |||  | |||||||||| |||| ||||||||||| | ||||||    
T  40230589 attcacgcaccaa-gcccaaagagtgatgggcgttaggggggtgtattgggaaaaacccaagttccacatcggatagatgagactcttgatgagagttta 40230491  T
Q  137 aatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
     | ||||||| |||||||||||||  || |||||||| ||||| ||||||||    
T  40230490 taaagaggag-caatcctcaccttacgagccggttttgtaaggttgagttag 40230440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 100 - 190
Target Start/End: Original strand, 40926791 - 40926881
Alignment:
Q  100 tcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttagtc 190  Q
    ||||| ||| || |||||||||||||||||| |||||| |||||||||||||||||| |||| |||||||| ||||||||||||||||||||    
T  40926791 tcccatatcagatagataagactcttgataagagtttatatagaggagacaatcctctccttatgaaccgg-tttttaaggatgagttagtc 40926881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 38 - 160
Target Start/End: Complemental strand, 53640120 - 53639998
Alignment:
Q  38 attcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agttta 136  Q
    ||||||||||||| ||||| |||||||| || ||||||||  ||||||||||||||||||  ||||| |||||| ||||||||||||||| || ||| ||    
T  53640120 attcacgcaccaa-gcccagagagtgctaggtgtgatggggttgtattgggaaaaatccaagtcccatatcggatagataagactcttgacaagagtata 53640022  T
Q  137 aatagaggagacaatcctcacctt 160  Q
     | ||||||| |||||||||||||    
T  53640021 taaagaggaggcaatcctcacctt 53639998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 35 - 188
Target Start/End: Complemental strand, 39269035 - 39268883
Alignment:
Q  35 ccgattcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgata-aagt 133  Q
    |||||||||||| ||| |||||||||||| ||||||||| ||  ||||||||  ||||| | || ||| |||||||| |||||||||| ||||||  |||    
T  39269035 ccgattcacgcatcaa-gcccaaagagtgttgggcgtgacggaggtgtattgaaaaaaacctatgtcctacatcggatagataagactattgataggagt 39268937  T
Q  134 ttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    ||| |||||| ||  |||||||||||| | |||||| ||||||||||||||||||    
T  39268936 ttatatagagaaggtaatcctcaccttataaaccgg-tttttaaggatgagttag 39268883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 100 - 188
Target Start/End: Complemental strand, 39018884 - 39018796
Alignment:
Q  100 tcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    |||||||||||| |||||||||||||||||  |||||| ||||||||||||||||||| ||| |||||| | ||||||||||||||||||    
T  39018884 tcccacatcggatagataagactcttgataggagtttatatagaggagacaatcctcaacttatgaaccag-tttttaaggatgagttag 39018796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 38 - 188
Target Start/End: Complemental strand, 22407596 - 22407446
Alignment:
Q  38 attcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agttta 136  Q
    ||||||||||||| || ||||||||||||||||||| ||  ||||||||||||||||| |  |||||||||||| ||| || ||||| || || ||| ||    
T  22407596 attcacgcaccaa-gctcaaagagtgctgggcgtgagggaggtgtattgggaaaaatctaagtcccacatcggatagacaaaactctcgagaagagtata 22407498  T
Q  137 aatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
     | ||||||| || ||||||||||   | |||||||| ||||||||||||||    
T  22407497 taaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttag 22407446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 35 - 130
Target Start/End: Original strand, 26927057 - 26927152
Alignment:
Q  35 ccgattcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgataa 130  Q
    |||||||||||||||||||||||| |||| ||||||||| | | |||||||||||||||  | | |||||||||  | ||||||||||||||||||    
T  26927057 ccgattcacgcaccaaagcccaaatagtgttgggcgtgacgagggtgtattgggaaaaactcttgtcccacatcatatagataagactcttgataa 26927152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 82 - 160
Target Start/End: Original strand, 54495523 - 54495602
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcacctt 160  Q
    ||||||||||||||||  |||||||||||| ||||||||||||||| || |||||| | |||||||||||||||||||||    
T  54495523 tattgggaaaaatccaagtcccacatcggatagataagactcttgagaagagtttataaagaggagacaatcctcacctt 54495602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 82 - 188
Target Start/End: Complemental strand, 42637859 - 42637749
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagagg----agacaatcctcaccttctgaaccggtttttta 176  Q
    ||||||||||||  ||| |||||||| ||| |||||||||||||||||| |||||| ||| |||    |||||||||||||||| |||||||| ||||||    
T  42637859 tattgggaaaaactcatatcccacattggatagataagactcttgataagagtttatataaaggagacagacaatcctcaccttatgaaccgg-ttttta 42637761  T
Q  177 aggatgagttag 188  Q
    ||||||||||||    
T  42637760 aggatgagttag 42637749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 100 - 188
Target Start/End: Complemental strand, 29763790 - 29763701
Alignment:
Q  100 tcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    |||||||||||| |||||||||||||||||| |||||| | |||||||||| ||| || ||| |||||||||||| ||||||||| ||||    
T  29763790 tcccacatcggatagataagactcttgataagagtttataaagaggagacactccccatcttatgaaccggttttgtaaggatgaattag 29763701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 81 - 188
Target Start/End: Complemental strand, 4191235 - 4191127
Alignment:
Q  81 gtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaagg 179  Q
    ||||||||||||| |||  |||||||||||| ||| ||||||||||| || |||||| | ||||||||||||||| |||||   | |||||||| |||||    
T  4191235 gtattgggaaaaacccaagtcccacatcggatagacaagactcttgagaagagtttataaagaggagacaatcctgaccttacaagccggttttgtaagg 4191136  T
Q  180 atgagttag 188  Q
    |||||||||    
T  4191135 atgagttag 4191127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 113 - 188
Target Start/End: Original strand, 35011680 - 35011756
Alignment:
Q  113 agataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    |||||||||||||||||| || ||| | |||||||||| |||||||||| |||||||||||| ||||||||||||||    
T  35011680 agataagactcttgataagagattataaagaggagacactcctcaccttatgaaccggttttgtaaggatgagttag 35011756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 82 - 188
Target Start/End: Complemental strand, 4029756 - 4029649
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaagga 180  Q
    ||||||||| ||| ||  |||||||||||| ||||||||||||||| || |||||| | |||||| |||||| |||||||   |||||||||| ||||||    
T  4029756 tattgggaataatgcaagtcccacatcggatagataagactcttgagaagagtttataaagaggatacaatcttcaccttacaaaccggttttgtaagga 4029657  T
Q  181 tgagttag 188  Q
    ||||||||    
T  4029656 tgagttag 4029649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 82 - 188
Target Start/End: Original strand, 22339733 - 22339840
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaagga 180  Q
    ||||||||||||||||  |||||||||||| ||| ||||||||||| || |||||| | ||||||| |||||||||||||   |  ||||||| ||||||    
T  22339733 tattgggaaaaatccaagtcccacatcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagtcggttttgtaagga 22339832  T
Q  181 tgagttag 188  Q
    ||||||||    
T  22339833 tgagttag 22339840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 38 - 125
Target Start/End: Complemental strand, 33798954 - 33798868
Alignment:
Q  38 attcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactctt 125  Q
    ||||||||||||| |||||||||||||| ||||||| ||| ||||||||| ||||| |||  |||||||||||| ||| |||||||||    
T  33798954 attcacgcaccaa-gcccaaagagtgctaggcgtgaagggggtgtattggaaaaaacccaaatcccacatcggatagacaagactctt 33798868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 82 - 188
Target Start/End: Original strand, 50692315 - 50692422
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaagga 180  Q
    |||||||||||| |||  |||||||||||| ||| ||||||||||| || |||||| | ||||||| |||||||||||||   | |||||||| ||||||    
T  50692315 tattgggaaaaacccaagtcccacatcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaagga 50692414  T
Q  181 tgagttag 188  Q
    ||||||||    
T  50692415 tgagttag 50692422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 115 - 188
Target Start/End: Original strand, 39269070 - 39269143
Alignment:
Q  115 ataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    |||||||||||||||| |||||| ||||||||| ||||||||||||| |||||| | ||||||||||||||||||    
T  39269070 ataagactcttgataagagtttatatagaggaggcaatcctcaccttatgaaccag-tttttaaggatgagttag 39269143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 103 - 188
Target Start/End: Complemental strand, 50203948 - 50203862
Alignment:
Q  103 cacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    ||||||||| ||||||||||||||| || |||||| | ||||||| || |||||||||| | |||||||||| ||||||||||||||    
T  50203948 cacatcggatagataagactcttgagaagagtttataaagaggaggcactcctcaccttataaaccggttttgtaaggatgagttag 50203862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 82 - 190
Target Start/End: Complemental strand, 51338553 - 51338444
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaagga 180  Q
    |||||||||||| |||  ||||||||| || ||||||||||||||| || ||| || | ||||||| |||||||||||||   | |||||||| ||||||    
T  51338553 tattgggaaaaacccaagtcccacatcagatagataagactcttgagaagagtatataaagaggaggcaatcctcaccttacaagccggttttgtaagga 51338454  T
Q  181 tgagttagtc 190  Q
    ||||||||||    
T  51338453 tgagttagtc 51338444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 82 - 188
Target Start/End: Complemental strand, 9264612 - 9264505
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaagga 180  Q
    |||||||||||| |||  |||||||||||| ||||||||||||||| || ||| || | ||||||| |||||||||| ||   | |||||||| ||||||    
T  9264612 tattgggaaaaacccaagtcccacatcggatagataagactcttgagaagagtatataaagaggaggcaatcctcactttacaagccggttttgtaagga 9264513  T
Q  181 tgagttag 188  Q
    ||||||||    
T  9264512 tgagttag 9264505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 59 - 160
Target Start/End: Complemental strand, 35358588 - 35358486
Alignment:
Q  59 gagtgctgggcgtgatgggag-tgtattgggaaaaatccatctcccacatcggacagataagactcttg-ataaagtttaaatagaggagacaatcctca 156  Q
    ||||||||||||||| ||||| ||||||||||||||||||  || |||||| || |||||||||||||| | ||||| || | | |||||||||||||||    
T  35358588 gagtgctgggcgtga-gggagatgtattgggaaaaatccaagtctcacatcagatagataagactcttgaaaaaagtatataaaaaggagacaatcctca 35358490  T
Q  157 cctt 160  Q
    ||||    
T  35358489 cctt 35358486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 82 - 188
Target Start/End: Complemental strand, 39078883 - 39078776
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaagga 180  Q
    |||||||||||| |||  ||||| |||||| ||| ||||||||||| || |||||| | ||||||| |||||||||||||   | |||||||| ||||||    
T  39078883 tattgggaaaaacccaagtcccatatcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaagga 39078784  T
Q  181 tgagttag 188  Q
    ||||||||    
T  39078783 tgagttag 39078776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 62 - 188
Target Start/End: Complemental strand, 54591597 - 54591470
Alignment:
Q  62 tgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcacctt 160  Q
    ||||| ||||||  || |||||||||||||||||||  |||||||||||| ||| ||||||||||| || |||||| | ||  ||| |||||||||||||    
T  54591597 tgctgagcgtgagaggggtgtattgggaaaaatccaagtcccacatcggatagacaagactcttgagaagagtttataaaggtgaggcaatcctcacctt 54591498  T
Q  161 ctgaaccggttttttaaggatgagttag 188  Q
       | |||||||| |||| |||||||||    
T  54591497 acaagccggttttgtaagcatgagttag 54591470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 95 - 188
Target Start/End: Original strand, 11414369 - 11414462
Alignment:
Q  95 ccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    |||| |||||||||||| | ||||||||||||| || |||||| | |||||||||||||||||||||   | |||||||| ||||||||||||||    
T  11414369 ccatgtcccacatcggata-ataagactcttgagaagagtttataaagaggagacaatcctcaccttagaagccggttttgtaaggatgagttag 11414462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 81 - 188
Target Start/End: Complemental strand, 19820641 - 19820533
Alignment:
Q  81 gtattgggaaaaatcc-atctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaag 178  Q
    ||||||||||||| || || | |||||||||| | |||| |||||||| || |||||| | |||||||||||||||||||||   |||||||||| ||||    
T  19820641 gtattgggaaaaaacccatgttccacatcggata-ataaaactcttgagaagagtttataaagaggagacaatcctcaccttacaaaccggttttgtaag 19820543  T
Q  179 gatgagttag 188  Q
    ||||||||||    
T  19820542 gatgagttag 19820533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 35 - 188
Target Start/End: Original strand, 20737171 - 20737304
Alignment:
Q  35 ccgattcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgataaagtt 134  Q
    |||||||||||||||| |||||||||||| ||||||||||||| ||||||||||       ||| |||||||||||| ||||||           |||||    
T  20737171 ccgattcacgcaccaa-gcccaaagagtgttgggcgtgatgggggtgtattggg-------catgtcccacatcggagagataa-----------aagtt 20737251  T
Q  135 taaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    || |||||||| |||||||  ||||| |||||||| ||||||||||||||||||    
T  20737252 tatatagaggaaacaatcccaaccttatgaaccgg-tttttaaggatgagttag 20737304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 33799088 - 33799141
Alignment:
Q  20 tgctgggcgtgacggccgattcacgcaccaaagcccaaagagtgctgggcgtga 73  Q
    |||||||||||| |||||||||||| ||| |||||||||||||| |||||||||    
T  33799088 tgctgggcgtgatggccgattcacgtacccaagcccaaagagtgttgggcgtga 33799141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 80 - 188
Target Start/End: Original strand, 44367569 - 44367677
Alignment:
Q  80 tgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaag 178  Q
    |||||||||||||| | || || || ||| || ||||||||||||||| || |||||| ||||||||||||||||||| ||| |||| | | |||| |||    
T  44367569 tgtattgggaaaaaccgatgtctcatatcagatagataagactcttgagaagagtttatatagaggagacaatcctcaacttatgaa-ctgattttcaag 44367667  T
Q  179 gatgagttag 188  Q
    ||||||||||    
T  44367668 gatgagttag 44367677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 100 - 188
Target Start/End: Complemental strand, 51642729 - 51642640
Alignment:
Q  100 tcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    |||||||||||| ||||||||||||||| || ||| || | ||||||| |||||||||||||   | |||||||| ||||||||||||||    
T  51642729 tcccacatcggatagataagactcttgagaagagtatataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttag 51642640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 113 - 188
Target Start/End: Complemental strand, 19984732 - 19984657
Alignment:
Q  113 agataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    |||||||||| ||| ||| |||||| |||||  |||||||||||||||| ||||||||| |||||||||||||||||    
T  19984732 agataagacttttggtaagagtttatatagactagacaatcctcaccttatgaaccggt-ttttaaggatgagttag 19984657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 81 - 188
Target Start/End: Complemental strand, 37058884 - 37058776
Alignment:
Q  81 gtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaagg 179  Q
    ||||||||||||| |||  ||||||||| || ||| ||||||||||| || ||| || | |||||||  ||||||||||||   |||||||||| |||||    
T  37058884 gtattgggaaaaacccaagtcccacatcagatagacaagactcttgagaagagtatataaagaggaggtaatcctcaccttacaaaccggttttgtaagg 37058785  T
Q  180 atgagttag 188  Q
    |||||||||    
T  37058784 atgagttag 37058776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 113 - 188
Target Start/End: Complemental strand, 50338463 - 50338387
Alignment:
Q  113 agataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    |||||||||||||||||| |||||| ||||||||||||||| |||||||   | |||||||| ||||| ||||||||    
T  50338463 agataagactcttgataagagtttatatagaggagacaatcttcaccttacaagccggttttgtaaggttgagttag 50338387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 82 - 188
Target Start/End: Complemental strand, 22407760 - 22407653
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaagga 180  Q
    ||||||||||||||||  |||||||||||| ||| |||||||| || || ||| || | ||||||| || ||||||||||   | |||||||| ||||||    
T  22407760 tattgggaaaaatccaagtcccacatcggatagacaagactctcgagaagagtatataaagaggaggcactcctcaccttacaagccggttttgtaagga 22407661  T
Q  181 tgagttag 188  Q
    ||||||||    
T  22407660 tgagttag 22407653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 102 - 188
Target Start/End: Complemental strand, 37040075 - 37039989
Alignment:
Q  102 ccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    |||||||| | |||||||||||||||||| |||| | |||||||||||||| |||||||| ||||   | ||||||||||||||||||    
T  37040075 ccacatcgaaaagataagactcttgataagagttaatatagaggagacaattctcaccttatgaattag-tttttaaggatgagttag 37039989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 100 - 186
Target Start/End: Complemental strand, 44461161 - 44461074
Alignment:
Q  100 tcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagtt 186  Q
    |||||||||||  | |||| ||||||||||| |||||| | |||||||||| |||||||||| |||| | ||||| ||||||||||||    
T  44461161 tcccacatcgggtaaataacactcttgataagagtttataaagaggagacattcctcaccttgtgaatcagttttgtaaggatgagtt 44461074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 82 - 188
Target Start/End: Complemental strand, 44145506 - 44145400
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttgataaagtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggat 181  Q
    |||||||||||| |||  |||||||||||| ||||| ||||||||||||   ||| | | ||||| || |||||||||| | | |||||| | |||||||    
T  44145506 tattgggaaaaacccaaatcccacatcggatagatatgactcttgataagagttataaaaaggaggcactcctcaccttataagccggttctgtaaggat 44145407  T
Q  182 gagttag 188  Q
    |||||||    
T  44145406 gagttag 44145400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 82 - 187
Target Start/End: Complemental strand, 53640284 - 53640178
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaagga 180  Q
    |||||||||||| |||  ||||||||| || ||||||||||||||| || ||| || | ||||||| |||||||||||||   | |||||| | ||||||    
T  53640284 tattgggaaaaacccaagtcccacatcagatagataagactcttgagaagagtatataaagaggaggcaatcctcaccttacaagccggttatgtaagga 53640185  T
Q  181 tgagtta 187  Q
    |||||||    
T  53640184 tgagtta 53640178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 100 - 188
Target Start/End: Complemental strand, 21832785 - 21832696
Alignment:
Q  100 tcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    |||||||||||| ||| ||||||||||| || |||||| |  |||||||||||||||||||| |   | |||||| ||||||||||||||    
T  21832785 tcccacatcggatagacaagactcttgagaagagtttataaggaggagacaatcctcaccttatatgctggttttgtaaggatgagttag 21832696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 80 - 129
Target Start/End: Original strand, 29369791 - 29369840
Alignment:
Q  80 tgtattgggaaaaatccatctcccacatcggacagataagactcttgata 129  Q
    |||||||||||||| |||  |||||||||||| |||||||||||||||||    
T  29369791 tgtattgggaaaaacccaagtcccacatcggatagataagactcttgata 29369840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 131 - 188
Target Start/End: Original strand, 33799161 - 33799218
Alignment:
Q  131 agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    |||||| ||||||||||||||||| ||||  ||||||| |||| ||||||||||||||    
T  33799161 agtttatatagaggagacaatcctaacctgatgaaccgattttgtaaggatgagttag 33799218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 100 - 188
Target Start/End: Complemental strand, 39956768 - 39956679
Alignment:
Q  100 tcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    ||||||||| || ||| ||||||||||| || |||||| | ||||||| |||||||||||||   | |||||||| ||||||||||||||    
T  39956768 tcccacatcagatagacaagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttag 39956679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 100 - 160
Target Start/End: Complemental strand, 44145215 - 44145154
Alignment:
Q  100 tcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcacctt 160  Q
    ||||||||| || |||||||||||||||||| |||||| | |||||||||||| ||||||||    
T  44145215 tcccacatcagatagataagactcttgataatagtttataaagaggagacaatactcacctt 44145154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 188
Target Start/End: Original strand, 49477350 - 49477426
Alignment:
Q  113 agataagactcttgataaa-gtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    ||||||||||||||| ||| ||||| | ||||||| |||||||||||||   | |||||||| ||||||||||||||    
T  49477350 agataagactcttgagaaaagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttag 49477426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 100 - 154
Target Start/End: Original strand, 26915126 - 26915181
Alignment:
Q  100 tcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcct 154  Q
    ||||| ||| || |||||||||||||||||| |||||| |||||||||||||||||    
T  26915126 tcccagatcagatagataagactcttgataagagtttatatagaggagacaatcct 26915181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 50 - 152
Target Start/End: Original strand, 27177577 - 27177680
Alignment:
Q  50 aagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgat-aaagtttaaatagaggagac 148  Q
    ||||||||||| || ||||||||| ||| ||||||||| |||||  ||  || |||||  || |||||||||||||||| | |||||| ||||||||| |    
T  27177577 aagcccaaagaatgttgggcgtgaggggggtgtattggaaaaaactcaagtctcacatgagatagataagactcttgatcagagtttagatagaggaggc 27177676  T
Q  149 aatc 152  Q
    ||||    
T  27177677 aatc 27177680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 82 - 188
Target Start/End: Original strand, 37223567 - 37223674
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaagga 180  Q
    |||||||||||| | |  |||||||||||| ||||||||||| ||| || |||||| | ||||||| ||||| |||||||   | |||||||| ||||||    
T  37223567 tattgggaaaaacctaagtcccacatcggatagataagactcctgagaagagtttataaagaggaggcaatcatcaccttacaagccggttttgtaagga 37223666  T
Q  181 tgagttag 188  Q
     |||||||    
T  37223667 agagttag 37223674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 102 - 187
Target Start/End: Complemental strand, 40230731 - 40230645
Alignment:
Q  102 ccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagtta 187  Q
    |||||||||| |||| ||||||||||| | |||||| | ||||||| |||||||||||||   | |||||||| ||||| |||||||    
T  40230731 ccacatcggatagatgagactcttgatgagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggttgagtta 40230645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 50 - 116
Target Start/End: Complemental strand, 46412177 - 46412112
Alignment:
Q  50 aagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagat 116  Q
    ||||||||||| || ||||||||| ||| |||||||||||||||| ||| ||||| |||||| ||||    
T  46412177 aagcccaaagaatgatgggcgtgagggg-gtgtattgggaaaaattcatgtcccatatcggatagat 46412112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 188
Target Start/End: Complemental strand, 16078949 - 16078868
Alignment:
Q  108 cggacagataagactcttgat-aaagtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    |||| |||||||||||||||| |||||||| ||| ||||| ||||| |||||||   |  ||||||||||||| ||||||||    
T  16078949 cggatagataagactcttgataaaagtttatataaaggaggcaatcatcaccttgcaagtcggttttttaaggttgagttag 16078868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 160
Target Start/End: Complemental strand, 46509698 - 46509637
Alignment:
Q  100 tcccacatcggacagataagactcttgataaa-gtttaaatagaggagacaatcctcacctt 160  Q
    |||||| ||||| ||| ||||||||||||||| ||||| ||||| ||| |||||||||||||    
T  46509698 tcccacgtcggatagagaagactcttgataaaagtttatatagaagaggcaatcctcacctt 46509637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 188
Target Start/End: Original strand, 54369049 - 54369138
Alignment:
Q  100 tcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    |||||||||||| ||||| ||||||||| || |||||| | ||||||| || ||||||| ||   |||||||||  ||||||||||||||    
T  54369049 tcccacatcggatagataggactcttgagaagagtttataaagaggaggcactcctcactttacaaaccggtttcgtaaggatgagttag 54369138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 55 - 130
Target Start/End: Complemental strand, 1715221 - 1715148
Alignment:
Q  55 caaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgataa 130  Q
    ||||||||| |||||||||  ||| ||| |||||||||| | |  || |||||| |||||||||||||||||||||    
T  1715221 caaagagtgatgggcgtga--ggaatgtgttgggaaaaaccgaagtctcacatcagacagataagactcttgataa 1715148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 100 - 159
Target Start/End: Original strand, 34992879 - 34992939
Alignment:
Q  100 tcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcacct 159  Q
    ||||||||| || ||||||||||||||| || |||||| | ||||||| ||||||||||||    
T  34992879 tcccacatcagatagataagactcttgagaagagtttataaagaggaggcaatcctcacct 34992939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 92; Significance: 1e-44; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 20 - 131
Target Start/End: Original strand, 10485108 - 10485219
Alignment:
Q  20 tgctgggcgtgacggccgattcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataag 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||  || |||||||||||||||||||| |||||||||||| |||||||    
T  10485108 tgctgggcgtgacggccgattcacgcaccaaagcccaaagagtgctgggcgtgacaggggtgtattgggaaaaatccatgtcccacatcggatagataag 10485207  T
Q  120 actcttgataaa 131  Q
    ||||||||||||    
T  10485208 actcttgataaa 10485219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 19 - 188
Target Start/End: Complemental strand, 8044720 - 8044550
Alignment:
Q  19 atgctgggcgtgacggccgattcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataa 118  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||| |||| ||| ||||||||||||||| |||  |||| |||| || ||||||    
T  8044720 atgctgggcgtgacagccgattcatgcaccaaagcccaaagagtgctgggtgtga-gggggtgtattgggaaaaacccaagtcccgcatcagatagataa 8044622  T
Q  119 gactcttgataa-agttta-aatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    |||||||||||| |||||| || ||||||| || |||||||||| |||||| ||||| ||||||||||||||    
T  8044621 gactcttgataagagtttataaaagaggaggcactcctcaccttatgaaccagttttgtaaggatgagttag 8044550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 22 - 188
Target Start/End: Complemental strand, 17265144 - 17264980
Alignment:
Q  22 ctgggcgtgacggccgattcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagac 121  Q
    |||||||||| |||||||||||||  |||||||||||||||| || |||||| ||| | ||||||||||||  |||| |||||||||||| |||||||||    
T  17265144 ctgggcgtgatggccgattcacgc--caaagcccaaagagtgttgtgcgtgacgggggcgtattgggaaaac-ccatgtcccacatcggatagataagac 17265048  T
Q  122 tcttgataaa-gtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    ||||| |||| ||||| ||||||||| ||||||||||||  |||||| ||||||||||||||||||||    
T  17265047 tcttggtaaaagtttatatagaggaggcaatcctcacctgatgaaccagttttttaaggatgagttag 17264980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 38 - 187
Target Start/End: Complemental strand, 883756 - 883607
Alignment:
Q  38 attcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agttta 136  Q
    ||||||||||||| |||||||||||||||||||||| ||| ||||||||||||||| |||  |||||||||||| ||||||||||||||| || ||||||    
T  883756 attcacgcaccaa-gcccaaagagtgctgggcgtgaggggggtgtattgggaaaaacccaagtcccacatcggatagataagactcttgagaagagttta 883658  T
Q  137 aatagaggagacaatcctcaccttctgaaccggttttttaaggatgagtta 187  Q
     | ||||||| |||||||||||||   | |||||||| |||||||||||||    
T  883657 taaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagtta 883607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 35 - 188
Target Start/End: Original strand, 32667129 - 32667282
Alignment:
Q  35 ccgattcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agt 133  Q
    |||||||||||||||| |||||||||||||||||||||| ||| ||||||||||||||| | |  ||||||||| || |||||||||||||||||| |||    
T  32667129 ccgattcacgcaccaa-gcccaaagagtgctgggcgtgacgggggtgtattgggaaaaaccgaagtcccacatcagatagataagactcttgataagagt 32667227  T
Q  134 ttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    ||| ||||||||| ||||||| |||||   | |||||||| ||||||||||||||    
T  32667228 ttatatagaggaggcaatccttaccttacaagccggttttgtaaggatgagttag 32667282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 38 - 188
Target Start/End: Original strand, 17727353 - 17727503
Alignment:
Q  38 attcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agttta 136  Q
    ||||||||||||| |||||||||||||||||||||| ||| ||||||||||||||| |||  |||||||||||| ||||||||||||||| || ||||||    
T  17727353 attcacgcaccaa-gcccaaagagtgctgggcgtgaggggggtgtattgggaaaaacccaagtcccacatcggatagataagactcttgagaagagttta 17727451  T
Q  137 aatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
     | |||| || |||||||||||||   | |||||||| ||||||||||||||    
T  17727452 taaagagaaggcaatcctcaccttacaagccggttttgtaaggatgagttag 17727503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 82 - 188
Target Start/End: Original strand, 39386662 - 39386769
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaagga 180  Q
    |||||||||||| |||| |||||||||||| |||||||||||||||||| |||||| ||||||||| ||||||||||||| ||||| |||||| ||||||    
T  39386662 tattgggaaaaacccatgtcccacatcggatagataagactcttgataagagtttatatagaggaggcaatcctcaccttatgaactggttttgtaagga 39386761  T
Q  181 tgagttag 188  Q
    ||||||||    
T  39386762 tgagttag 39386769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 38 - 188
Target Start/End: Original strand, 884006 - 884156
Alignment:
Q  38 attcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agttta 136  Q
    ||||||||||||| |||||||||||||||||||||| ||| ||||||||||||||| |||  |||||||||||| |||| |||||||||| || ||| ||    
T  884006 attcacgcaccaa-gcccaaagagtgctgggcgtgaggggggtgtattgggaaaaacccaagtcccacatcggatagatgagactcttgagaagagtata 884104  T
Q  137 aatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
     | ||||||| |||||||||||||   | |||||||| ||||| ||||||||    
T  884105 taaagaggaggcaatcctcaccttacaagccggttttgtaaggttgagttag 884156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 50 - 188
Target Start/End: Original strand, 12432065 - 12432204
Alignment:
Q  50 aagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagac 148  Q
    ||||||||||||||||||||||||  || ||||||||| |||||||||  |||||||||||| |||||||| |||||| || |||||| | ||||||| |    
T  12432065 aagcccaaagagtgctgggcgtgagcggggtgtattggaaaaaatccaagtcccacatcggatagataagaatcttgagaagagtttataaagaggaggc 12432164  T
Q  149 aatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    ||||||||||||   ||  |||||||||||||||||||||    
T  12432165 aatcctcaccttacaaattggttttttaaggatgagttag 12432204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 20 - 188
Target Start/End: Complemental strand, 4721977 - 4721811
Alignment:
Q  20 tgctgggcgtgacggccgattcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataag 119  Q
    |||||| || |||| ||||||||||| |||||||||||||| ||||||| ||||  || ||||||| ||||||| |||| |||||||||||| |||| ||    
T  4721977 tgctggacgagacgtccgattcacgctccaaagcccaaagaatgctgggtgtgaccggggtgtatt-ggaaaaacccatgtcccacatcggatagattag 4721879  T
Q  120 actcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    ||||||||||| |||||| ||||||||| ||||| ||| ||| ||||||    |||||||||||||||||    
T  4721878 actcttgataagagtttatatagaggaggcaatcatcaacttatgaacc--aattttaaggatgagttag 4721811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 41 - 188
Target Start/End: Original strand, 19859989 - 19860136
Alignment:
Q  41 cacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaat 139  Q
    |||||||||| |||||||||||||||||||||| ||| ||||||||||||||| |||  |||||||||||| ||| ||||||||||| || |||||| |     
T  19859989 cacgcaccaa-gcccaaagagtgctgggcgtgaggggggtgtattgggaaaaacccaagtcccacatcggatagacaagactcttgagaagagtttataa 19860087  T
Q  140 agaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    ||||||| |||||| ||||||   | |||||||| ||||||||| ||||    
T  19860088 agaggaggcaatccacaccttacaagccggttttgtaaggatgatttag 19860136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 38 - 188
Target Start/End: Original strand, 40009923 - 40010073
Alignment:
Q  38 attcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agttta 136  Q
    ||||||||||||| |||||||||||||||||||||| ||| ||||||||||||||| |||  |||||||||||| |||||| |||||||| || ||  ||    
T  40009923 attcacgcaccaa-gcccaaagagtgctgggcgtgaggggggtgtattgggaaaaacccaagtcccacatcggatagataaaactcttgagaagagcata 40010021  T
Q  137 aatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
     | ||||||| |||||||||||||   | |||||||| |||||||| |||||    
T  40010022 gaaagaggaggcaatcctcaccttacaagccggttttgtaaggatgtgttag 40010073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 79 - 188
Target Start/End: Complemental strand, 27545231 - 27545121
Alignment:
Q  79 gtgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaa 177  Q
    ||||||||| |||||||||| |||||||||||| ||||||||||||||| || |||||| | ||||||| |||||||||||||   |||||||||| |||    
T  27545231 gtgtattggaaaaaatccatgtcccacatcggatagataagactcttgagaagagtttataaagaggaggcaatcctcaccttacaaaccggttttgtaa 27545132  T
Q  178 ggatgagttag 188  Q
    |||||||||||    
T  27545131 ggatgagttag 27545121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 38 - 159
Target Start/End: Complemental strand, 29695493 - 29695373
Alignment:
Q  38 attcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agttta 136  Q
    ||||||||||||| |||||||||||||||||||||| ||| ||||||||||||||| |||  || ||||||||| ||||||||||||||| || ||||||    
T  29695493 attcacgcaccaa-gcccaaagagtgctgggcgtgagggg-gtgtattgggaaaaacccaagtctcacatcggatagataagactcttgagaagagttta 29695396  T
Q  137 aatagaggagacaatcctcacct 159  Q
     | |||| |||||||||||||||    
T  29695395 taaagagtagacaatcctcacct 29695373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 38 - 188
Target Start/End: Complemental strand, 33985923 - 33985776
Alignment:
Q  38 attcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agttta 136  Q
    ||||||||||||| |||||||||||| ||||||||| ||| ||||||||| ||||| |||  |||||||||||| ||||||||||||||| || ||| ||    
T  33985923 attcacgcaccaa-gcccaaagagtgttgggcgtgaaggg-gtgtattggcaaaaacccaagtcccacatcggatagataagactcttgagaagagtata 33985826  T
Q  137 aatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    |  ||||||| |||||||||||||   | |||||||| ||||||||||||||    
T  33985825 a--agaggaggcaatcctcaccttacaagccggttttgtaaggatgagttag 33985776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 80 - 188
Target Start/End: Original strand, 29676284 - 29676393
Alignment:
Q  80 tgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaag 178  Q
    ||||||||||||||  ||| || ||||||||| |||||||||||||||||| |||||| ||| ||||| |||||||||||||  ||||||||||| ||||    
T  29676284 tgtattgggaaaaacacatgtctcacatcggatagataagactcttgataagagtttatatataggagtcaatcctcaccttaagaaccggttttgtaag 29676383  T
Q  179 gatgagttag 188  Q
    | | ||||||    
T  29676384 gttaagttag 29676393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 82 - 188
Target Start/End: Complemental strand, 3435598 - 3435491
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaagga 180  Q
    |||||| |||||| ||  |||||||||||| ||||||||||||||| || |||||| | ||||||| |||||||||||||   |||||||||| ||||||    
T  3435598 tattggaaaaaattcaagtcccacatcggatagataagactcttgagaagagtttatacagaggaggcaatcctcaccttacaaaccggttttgtaagga 3435499  T
Q  181 tgagttag 188  Q
    ||||||||    
T  3435498 tgagttag 3435491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 82 - 184
Target Start/End: Original strand, 12431890 - 12431993
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaagga 180  Q
    |||||||||||| |||  |||||||||||| ||||||||||||||| || |||||| | |||||||||||||||||||||   | |||||||| ||||||    
T  12431890 tattgggaaaaacccaagtcccacatcggatagataagactcttgagaagagtttataaagaggagacaatcctcaccttacaagccggttttgtaagga 12431989  T
Q  181 tgag 184  Q
    ||||    
T  12431990 tgag 12431993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 82 - 160
Target Start/End: Complemental strand, 6986528 - 6986449
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcacctt 160  Q
    ||||||||||||||||  |||||||||||| ||||||||||||||| || |||||| | ||||||| |||||||||||||    
T  6986528 tattgggaaaaatccaagtcccacatcggatagataagactcttgagaagagtttataaagaggaggcaatcctcacctt 6986449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 82 - 188
Target Start/End: Complemental strand, 20999101 - 20998994
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaagga 180  Q
    |||||||||||| |||  |||||||||||| ||| ||||||||||| || |||||| | ||||||| |||||||||||||   | |||||||| ||||||    
T  20999101 tattgggaaaaacccaagtcccacatcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaagga 20999002  T
Q  181 tgagttag 188  Q
    ||||||||    
T  20999001 tgagttag 20998994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 82 - 186
Target Start/End: Complemental strand, 33986087 - 33985982
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaagga 180  Q
    |||||||||||| ||| ||||||||||||| ||||||||||||||| || ||| || | ||||||| |||||||||||||   | |||||||| ||||||    
T  33986087 tattgggaaaaacccaactcccacatcggatagataagactcttgagaagagtatataaagaggaggcaatcctcaccttacaagccggttttgtaagga 33985988  T
Q  181 tgagtt 186  Q
     |||||    
T  33985987 agagtt 33985982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 80 - 188
Target Start/End: Original strand, 34775347 - 34775456
Alignment:
Q  80 tgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaag 178  Q
    |||||||||||||| |||  |||||||||||| ||| ||||||||||| || | |||| | ||||||| |||||||||||||   | |||||||| ||||    
T  34775347 tgtattgggaaaaacccaagtcccacatcggatagacaagactcttgagaagaatttataaagaggaggcaatcctcaccttacaagccggttttgtaag 34775446  T
Q  179 gatgagttag 188  Q
    ||||||||||    
T  34775447 gatgagttag 34775456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 132 - 188
Target Start/End: Original strand, 39108398 - 39108454
Alignment:
Q  132 gtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    ||||| ||||||||||||||||||||||| | |||||||||| ||||||||||||||    
T  39108398 gtttatatagaggagacaatcctcaccttataaaccggttttgtaaggatgagttag 39108454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 82 - 186
Target Start/End: Original strand, 29676144 - 29676246
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttgataaa-gtttaaatagaggagacaatcctcaccttctgaaccggttttttaagga 180  Q
    |||||||||||| |||| |||||||||| | |||||||| ||  |||||| ||||| ||||||||||||||||||||||| | || ||| ||||||||||    
T  29676144 tattgggaaaaacccatatcccacatcgaatagataagattc--gataaaagtttatatagaggagacaatcctcaccttat-aaacggatttttaagga 29676240  T
Q  181 tgagtt 186  Q
    | ||||    
T  29676241 taagtt 29676246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 131 - 188
Target Start/End: Original strand, 10485236 - 10485292
Alignment:
Q  131 agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    |||||| |||||||||||||||||||||||  ||||||| ||||||||||||||||||    
T  10485236 agtttatatagaggagacaatcctcaccttacgaaccgg-tttttaaggatgagttag 10485292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 113 - 185
Target Start/End: Original strand, 17265220 - 17265293
Alignment:
Q  113 agataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagt 185  Q
    |||||||||||||| ||| |||||| ||||||||  ||||||||||||  ||||||| ||||||||||||||||    
T  17265220 agataagactcttggtaagagtttatatagaggatgcaatcctcacctgatgaaccgattttttaaggatgagt 17265293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 188
Target Start/End: Original strand, 22447272 - 22447404
Alignment:
Q  56 aaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcct 154  Q
    |||||||||||| ||||| ||| ||||||||||||||| |||  ||| |||| | | |||||||||| ||||||| |||||  | ||||||  || ||||    
T  22447272 aaagagtgctggacgtgagggg-gtgtattgggaaaaacccaagtcctacattgaatagataagacttttgataagagtttttaaagaggacgcactcct 22447370  T
Q  155 caccttctgaaccggttttttaaggatgagttag 188  Q
    |||||| |||||| ||||| || |||||||||||    
T  22447371 caccttatgaaccagttttatagggatgagttag 22447404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 81 - 188
Target Start/End: Original strand, 16006968 - 16007076
Alignment:
Q  81 gtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaagg 179  Q
    ||||||||||||| |||  |||||||||||| ||| ||||||||||| || ||| || | |||||||  ||||||||||||   | |||||||| |||||    
T  16006968 gtattgggaaaaacccaagtcccacatcggatagacaagactcttgagaagagtatataaagaggaggtaatcctcaccttacaagccggttttgtaagg 16007067  T
Q  180 atgagttag 188  Q
    |||||||||    
T  16007068 atgagttag 16007076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 100 - 187
Target Start/End: Original strand, 31761341 - 31761429
Alignment:
Q  100 tcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagtta 187  Q
    |||||||||||  ||||||||||||| |||| |||||| ||||||||| |||||||||||||   | ||| |||| |||||||||||||    
T  31761341 tcccacatcgggtagataagactcttaataagagtttatatagaggaggcaatcctcaccttacaagccgattttgtaaggatgagtta 31761429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 82 - 188
Target Start/End: Complemental strand, 25621397 - 25621290
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaagga 180  Q
    |||||||||||| |||  || ||||||||| ||||||||||||||| || ||| || | |||||| |||| |||||||||   | |||||||| ||||||    
T  25621397 tattgggaaaaacccaagtctcacatcggatagataagactcttgagaagagtatataaagaggaaacaaccctcaccttacaagccggttttgtaagga 25621298  T
Q  181 tgagttag 188  Q
    ||||||||    
T  25621297 tgagttag 25621290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 82 - 186
Target Start/End: Complemental strand, 7257720 - 7257615
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaagga 180  Q
    |||||||||||||| |  ||||| |||||| ||||||||||||||| || |||||| | ||||||  |||||||||||||   |  ||||||| ||||||    
T  7257720 tattgggaaaaatctaagtcccatatcggatagataagactcttgagaatagtttataaagaggatgcaatcctcaccttacaagtcggttttgtaagga 7257621  T
Q  181 tgagtt 186  Q
    ||||||    
T  7257620 tgagtt 7257615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 90 - 158
Target Start/End: Original strand, 36264071 - 36264140
Alignment:
Q  90 aaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcacc 158  Q
    |||| |||| |||||||||||| |||||| |||||||||||  ||||| ||||||||| |||||||||||    
T  36264071 aaaaaccatgtcccacatcggatagataaaactcttgataagtgtttatatagaggaggcaatcctcacc 36264140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 113 - 188
Target Start/End: Complemental strand, 36264235 - 36264159
Alignment:
Q  113 agataagactcttgataaa-gtttaaatagaggagacaatcctca-ccttctgaaccggttttttaaggatgagttag 188  Q
    ||||||||||||||||||  ||||| ||||||| ||||||||||| || | ||||||||||||| |||||||||||||    
T  36264235 agataagactcttgataagtgtttatatagaggtgacaatcctcaaccctatgaaccggttttt-aaggatgagttag 36264159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 160
Target Start/End: Original strand, 31761123 - 31761203
Alignment:
Q  81 gtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcacctt 160  Q
    ||||||||||||| | |  |||||||||||| |||||||||| |||| || |||||| ||||| ||| |||||||||||||    
T  31761123 gtattgggaaaaacctaagtcccacatcggatagataagacttttgagaagagtttatatagaagaggcaatcctcacctt 31761203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 82 - 188
Target Start/End: Original strand, 32666969 - 32667076
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaagga 180  Q
    |||||||||||| |||  |||| ||| ||| | |||||||||||||||| |||||| ||||||||| |||| || |||||   | |||||||| ||| ||    
T  32666969 tattgggaaaaacccaagtccctcattggataaataagactcttgataagagtttatatagaggaggcaattcttaccttacaagccggttttgtaatga 32667068  T
Q  181 tgagttag 188  Q
    ||||||||    
T  32667069 tgagttag 32667076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 147
Target Start/End: Original strand, 12419830 - 12419896
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggaga 147  Q
    |||||||||||| |||  |||||||||||| ||||||||||||||| || |||||| | ||||||||    
T  12419830 tattgggaaaaacccaagtcccacatcggatagataagactcttgagaagagtttataaagaggaga 12419896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 188
Target Start/End: Complemental strand, 3976565 - 3976476
Alignment:
Q  100 tcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    |||||||||||| |||||| | |||||| || |||||| | ||||||| || ||||||||||   | |||||||| ||||||||||||||    
T  3976565 tcccacatcggatagataatattcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttag 3976476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 188
Target Start/End: Complemental strand, 6183460 - 6183371
Alignment:
Q  100 tcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    |||||||||||| |||||  |||||||| || |||||| | |||||||||| | ||||||||   | |||||||| ||||||||||||||    
T  6183460 tcccacatcggatagatagtactcttgagaagagtttataaagaggagacacttctcaccttacaagccggttttgtaaggatgagttag 6183371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 127
Target Start/End: Original strand, 15518659 - 15518704
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttga 127  Q
    ||||||||||||||||| | ||| |||||| |||||||||||||||    
T  15518659 tattgggaaaaatccatgttccaaatcggatagataagactcttga 15518704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 127
Target Start/End: Original strand, 21734408 - 21734453
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttga 127  Q
    |||||||||||| |||  |||||||||||| |||||||||||||||    
T  21734408 tattgggaaaaacccacatcccacatcggatagataagactcttga 21734453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 188
Target Start/End: Original strand, 29684001 - 29684110
Alignment:
Q  80 tgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaag 178  Q
    |||||||||||||| |||  |||| |||| || ||| ||||||||||| || ||| || | ||||||| |||||||||||||   | |||||||| ||||    
T  29684001 tgtattgggaaaaacccaagtcccgcatcagatagacaagactcttgagaagagtatataaagaggaggcaatcctcaccttacaagccggttttgtaag 29684100  T
Q  179 gatgagttag 188  Q
    ||| ||||||    
T  29684101 gataagttag 29684110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 82 - 153
Target Start/End: Original strand, 19859917 - 19859989
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcc 153  Q
    |||||||||||| |||  |||||||||||| ||| ||||||||||| || |||||| | ||||||| ||||||    
T  19859917 tattgggaaaaacccaagtcccacatcggatagacaagactcttgagaagagtttataaagaggaggcaatcc 19859989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 82 - 185
Target Start/End: Original strand, 39108080 - 39108184
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaagga 180  Q
    ||||||||||||| ||  ||||||||| || | |||||| ||||||||| |||||| |||||||||  |||| |||||||   | ||| |||| ||||||    
T  39108080 tattgggaaaaattcaagtcccacatcagatatataagaatcttgataagagtttatatagaggaggtaatcatcaccttacaatccgattttgtaagga 39108179  T
Q  181 tgagt 185  Q
    |||||    
T  39108180 tgagt 39108184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 68; Significance: 3e-30; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 38 - 188
Target Start/End: Complemental strand, 11313537 - 11313387
Alignment:
Q  38 attcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agttta 136  Q
    ||||||||||||| |||||||||||||||||||||| ||| ||||||||||||||| |||  |||||||||||| ||||||||||||||| || ||| ||    
T  11313537 attcacgcaccaa-gcccaaagagtgctgggcgtgaggggggtgtattgggaaaaacccaaatcccacatcggatagataagactcttgagaagagtata 11313439  T
Q  137 aatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
     | ||||||| |||||||||||||   | || ||||| ||||||||||||||    
T  11313438 taaagaggaggcaatcctcaccttacaagccagttttgtaaggatgagttag 11313387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 35 - 188
Target Start/End: Original strand, 24558734 - 24558887
Alignment:
Q  35 ccgattcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agt 133  Q
    |||||||||||||||| |||||||||||||||||||||| ||| ||||||||| ||||| | || || ||||||||| ||||||||||||| | || |||    
T  24558734 ccgattcacgcaccaa-gcccaaagagtgctgggcgtgacgggggtgtattggaaaaaacctatgtctcacatcggatagataagactctttagaagagt 24558832  T
Q  134 ttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    ||| | |||||||||||||||||||||   | | |||||| ||||||||||||||    
T  24558833 ttataaagaggagacaatcctcaccttacaagctggttttgtaaggatgagttag 24558887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 52 - 188
Target Start/End: Complemental strand, 15101253 - 15101116
Alignment:
Q  52 gcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaa 150  Q
    |||||||||||| ||||||||| ||| |||||||||||||||||||  |||||||||||| ||| ||||||||||| || |||||| | ||||||| |||    
T  15101253 gcccaaagagtgttgggcgtgaggggggtgtattgggaaaaatccaagtcccacatcggatagacaagactcttgagaagagtttataaagaggaggcaa 15101154  T
Q  151 tcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    ||||||||||   | |||||||| ||||||||||||||    
T  15101153 tcctcaccttacaagccggttttgtaaggatgagttag 15101116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 38 - 130
Target Start/End: Complemental strand, 2923112 - 2923020
Alignment:
Q  38 attcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgataa 130  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||  ||| |||||| ||||| ||||| ||||||||||||    
T  2923112 attcacgcaccaaagcccaaagagtgctgggcgtgacgggggtgtattgggaaaaactcatgtcccacgtcggatagatatgactcttgataa 2923020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 35 - 188
Target Start/End: Complemental strand, 19712562 - 19712409
Alignment:
Q  35 ccgattcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agt 133  Q
    |||||||||||||||  |||||||||||| |||||||||  || |||||||||||||||||||| | |||||||||| ||||||||||||||| || |||    
T  19712562 ccgattcacgcaccat-gcccaaagagtgttgggcgtgacaggggtgtattgggaaaaatccatgttccacatcggatagataagactcttgagaatagt 19712464  T
Q  134 ttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    ||| |  |||||| |||||| ||||||   | ||| |||| ||||||||||||||    
T  19712463 ttataaggaggaggcaatccccaccttacaagccgattttgtaaggatgagttag 19712409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 59 - 188
Target Start/End: Original strand, 25998993 - 25999122
Alignment:
Q  59 gagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcac 157  Q
    ||||| ||||||||| ||| ||||||||||||||| |||  ||||||||||||  |||||||||| |||||| |||||| | |||||||||| |||||||    
T  25998993 gagtgatgggcgtgagggg-gtgtattgggaaaaacccaagtcccacatcggattgataagactcatgataatagtttataaagaggagacactcctcac 25999091  T
Q  158 cttctgaaccggttttttaaggatgagttag 188  Q
    ||| |||||||||||| |||| |||||||||    
T  25999092 cttatgaaccggttttgtaagaatgagttag 25999122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 82 - 188
Target Start/End: Original strand, 26098334 - 26098441
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaagga 180  Q
    |||||||||||| |||  |||||||||||| ||||||||||| |||||| |||||| | |||||||||| |||||||||| ||||||| |||| ||||||    
T  26098334 tattgggaaaaacccaagtcccacatcggatagataagactcatgataatagtttataaagaggagacactcctcaccttatgaaccgcttttgtaagga 26098433  T
Q  181 tgagttag 188  Q
    ||||||||    
T  26098434 tgagttag 26098441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 56 - 188
Target Start/End: Original strand, 26098721 - 26098853
Alignment:
Q  56 aaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcct 154  Q
    |||||||| |||| |||| ||| ||||||||||||||| |||  ||| ||||||||  |||||||||| |||||| |||||| | |||||||||| ||||    
T  26098721 aaagagtgatgggtgtgagggg-gtgtattgggaaaaacccaagtcctacatcggattgataagactcatgataatagtttataaagaggagacactcct 26098819  T
Q  155 caccttctgaaccggttttttaaggatgagttag 188  Q
    |||||| |||||||||||| |||| |||||||||    
T  26098820 caccttatgaaccggttttgtaagaatgagttag 26098853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 76 - 188
Target Start/End: Original strand, 28149779 - 28149892
Alignment:
Q  76 ggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttt 174  Q
    ||||| |||||||||||| |||| |||||||||||| |||||| ||||||||||| |||||| | ||||||| |||||||||||||   | ||||||||     
T  28149779 ggagtctattgggaaaaacccatgtcccacatcggatagataaaactcttgataagagtttataaagaggaggcaatcctcaccttacaagccggttttg 28149878  T
Q  175 taaggatgagttag 188  Q
    ||||||||||||||    
T  28149879 taaggatgagttag 28149892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 38 - 188
Target Start/End: Complemental strand, 18494429 - 18494279
Alignment:
Q  38 attcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agttta 136  Q
    ||||||||||||| ||| |||||||||||||||||| ||| ||||||||||||||| |||  ||||||||| || ||| ||||||||||| || | ||||    
T  18494429 attcacgcaccaa-gcctaaagagtgctgggcgtgaggggggtgtattgggaaaaacccaaatcccacatcagatagacaagactcttgagaataattta 18494331  T
Q  137 aatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
     | ||||||| ||||||||| |||   | |||||||| ||||||||| ||||    
T  18494330 taaagaggaggcaatcctcatcttacaagccggttttgtaaggatgaattag 18494279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 82 - 188
Target Start/End: Original strand, 25998809 - 25998916
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaagga 180  Q
    |||||||||||| |||  |||||||||||| ||||||||||| |||||| |||||| | |||||||||| |||||||||| ||||||| |||| ||||||    
T  25998809 tattgggaaaaacccaagtcccacatcggatagataagactcatgataatagtttataaagaggagacactcctcaccttatgaaccgcttttgtaagga 25998908  T
Q  181 tgagttag 188  Q
    ||| ||||    
T  25998909 tgatttag 25998916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 38 - 128
Target Start/End: Original strand, 11316997 - 11317086
Alignment:
Q  38 attcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgat 128  Q
    ||||||||||||| |||||||||||||||||||||| ||| ||||||||||||||| |||  |||||||||||| |||| | |||||||||    
T  11316997 attcacgcaccaa-gcccaaagagtgctgggcgtgaggggggtgtattgggaaaaacccaagtcccacatcggatagatgaaactcttgat 11317086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 56 - 188
Target Start/End: Original strand, 26098515 - 26098647
Alignment:
Q  56 aaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcct 154  Q
    |||||||| ||||||||| ||| ||||||||||||||| |||  ||||||||||    |||||||||| |||||| |||||| | |||||||||| ||||    
T  26098515 aaagagtgatgggcgtgagggg-gtgtattgggaaaaacccaagtcccacatcgtcttgataagactcatgataatagtttataaagaggagacactcct 26098613  T
Q  155 caccttctgaaccggttttttaaggatgagttag 188  Q
    |||||| ||||||| |||| |||| |||||||||    
T  26098614 caccttatgaaccgcttttgtaagaatgagttag 26098647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 81 - 174
Target Start/End: Original strand, 26394542 - 26394636
Alignment:
Q  81 gtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttt 174  Q
    |||||||||||||  ||| | |||||||||| |||||||||||||||||| |||||| ||||||||| |||||||||||||  |||||| |||||    
T  26394542 gtattgggaaaaactcatgttccacatcggatagataagactcttgataagagtttatatagaggaggcaatcctcaccttaagaaccgattttt 26394636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 56 - 188
Target Start/End: Original strand, 16590150 - 16590283
Alignment:
Q  56 aaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcct 154  Q
    |||||||| ||||||||| ||| ||||||||||||||| |||  |||||||||||| ||| ||||||||||  || | |||| | ||||||| |||||||    
T  16590150 aaagagtgttgggcgtgaggggggtgtattgggaaaaacccaagtcccacatcggatagacaagactcttgggaagaatttataaagaggaggcaatcct 16590249  T
Q  155 caccttctgaaccggttttttaaggatgagttag 188  Q
    ||| ||   | |||||||| ||||||||||||||    
T  16590250 cactttacaagccggttttgtaaggatgagttag 16590283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 56 - 188
Target Start/End: Complemental strand, 16605230 - 16605097
Alignment:
Q  56 aaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcct 154  Q
    |||||||| ||||||||| ||| ||||||||||||||| |||  |||||||||||| ||| ||||||||||  || | |||| | ||||||| |||||||    
T  16605230 aaagagtgttgggcgtgaggggggtgtattgggaaaaacccaagtcccacatcggatagacaagactcttgggaagaatttataaagaggaggcaatcct 16605131  T
Q  155 caccttctgaaccggttttttaaggatgagttag 188  Q
    ||| ||   | |||||||| ||||||||||||||    
T  16605130 cactttacaagccggttttgtaaggatgagttag 16605097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 100 - 188
Target Start/End: Complemental strand, 19292012 - 19291923
Alignment:
Q  100 tcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    |||||||||||| |||||||||||||||||| |||||  ||||||||||||||||||||||| | |   |||||| ||||||||||||||    
T  19292012 tcccacatcggatagataagactcttgataagagtttgtatagaggagacaatcctcaccttataagttggttttgtaaggatgagttag 19291923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 35 - 185
Target Start/End: Complemental strand, 15102909 - 15102760
Alignment:
Q  35 ccgattcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgat-aaagt 133  Q
    ||||||||||||||||| ||||||||||| |||||||||  || ||||||||||||||| |||  | ||||||| || |||| ||||||||||| | |||    
T  15102909 ccgattcacgcaccaaa-cccaaagagtgttgggcgtgacaggggtgtattgggaaaaacccaagt-ccacatcagatagatgagactcttgatgagagt 15102812  T
Q  134 ttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagt 185  Q
    ||| | ||||||| || ||||||| |    |||||||||| |||||||||||    
T  15102811 ttataaagaggagtcactcctcacttcacaaaccggttttgtaaggatgagt 15102760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 82 - 188
Target Start/End: Complemental strand, 16877122 - 16877015
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaagga 180  Q
    |||||||||||| |||  |||||||||||| ||| ||||||||||| || |||||| | ||||||| |||||||||||||   | |||||||| ||||||    
T  16877122 tattgggaaaaacccaagtcccacatcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaagga 16877023  T
Q  181 tgagttag 188  Q
    ||||||||    
T  16877022 tgagttag 16877015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 50 - 173
Target Start/End: Original strand, 3713160 - 3713282
Alignment:
Q  50 aagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagac 148  Q
    |||||||||||||| |||||||||  ||| |||||||| |||||||||  | | |||||||| |||||||||| ||||||  |||||| ||||||||| |    
T  3713160 aagcccaaagagtgatgggcgtgagagga-tgtattggaaaaaatccaagtgc-acatcggaaagataagacttttgataggagtttatatagaggaggc 3713257  T
Q  149 aatcctcaccttctgaaccggtttt 173  Q
    ||||||||||||   ||||||||||    
T  3713258 aatcctcaccttacaaaccggtttt 3713282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 38 - 160
Target Start/End: Complemental strand, 29742589 - 29742469
Alignment:
Q  38 attcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgat-aaagttta 136  Q
    ||||||||||||| |||||||||||| ||||||||| ||| ||||||| |||||||   |  |||||||||||  |  ||||||||||||| ||||||||    
T  29742589 attcacgcaccaa-gcccaaagagtgttgggcgtgaggggggtgtattaggaaaaacttaagtcccacatcgg--atttaagactcttgatgaaagttta 29742493  T
Q  137 aatagaggagacaatcctcacctt 160  Q
     | ||||||| |||||||||||||    
T  29742492 taaagaggaggcaatcctcacctt 29742469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 82 - 188
Target Start/End: Original strand, 24558575 - 24558682
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaagga 180  Q
    ||||||||||||||||  ||||||||| || ||||||||||||||| || ||| || | ||||||| |||||||||||||   | |||||||| | ||||    
T  24558575 tattgggaaaaatccaagtcccacatcagatagataagactcttgagaagagtatataaagaggaggcaatcctcaccttacaagccggttttgtgagga 24558674  T
Q  181 tgagttag 188  Q
    ||||||||    
T  24558675 tgagttag 24558682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 100 - 188
Target Start/End: Complemental strand, 10733532 - 10733443
Alignment:
Q  100 tcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    |||||||| |||||||||| |||||||| || |||||| | |||||||||| ||||||||||   | |||||||| ||||||||||||||    
T  10733532 tcccacattggacagataacactcttgagaagagtttataaagaggagacactcctcaccttacaagccggttttgtaaggatgagttag 10733443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 88 - 188
Target Start/End: Complemental strand, 16876936 - 16876835
Alignment:
Q  88 gaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagtt 186  Q
    ||||||||||  |||||||| ||| ||| ||||||||||| || |||||| | ||||||| |||||||||||||   | |||||||| ||||||||||||    
T  16876936 gaaaaatccaagtcccacataggatagacaagactcttgagaatagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagtt 16876837  T
Q  187 ag 188  Q
    ||    
T  16876836 ag 16876835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 103 - 188
Target Start/End: Complemental strand, 5269364 - 5269278
Alignment:
Q  103 cacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    ||||||||| ||||||||||||||| || |||||| | |||| || |||||||||||||   | |||||||| ||||||||||||||    
T  5269364 cacatcggatagataagactcttgagaagagtttataaagagaaggcaatcctcaccttacaagccggttttgtaaggatgagttag 5269278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 138 - 188
Target Start/End: Complemental strand, 5592713 - 5592664
Alignment:
Q  138 atagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    ||||||||||||||||||| ||| ||||||||| |||||||||||||||||    
T  5592713 atagaggagacaatcctcaacttttgaaccggt-ttttaaggatgagttag 5592664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 100 - 188
Target Start/End: Complemental strand, 12134577 - 12134488
Alignment:
Q  100 tcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    |||||||||||| |||||  |||||||| || |||||| | |||||||||| |||| |||||   |||||||||| ||||||||||||||    
T  12134577 tcccacatcggatagatagcactcttgagaagagtttataaagaggagacactcctaaccttacaaaccggttttgtaaggatgagttag 12134488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 183
Target Start/End: Original strand, 30539245 - 30539329
Alignment:
Q  100 tcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatga 183  Q
    |||||||||||| |||||||||||||||||| |||||| | ||  |||||| ||||||||||   | |||||||| |||||||||    
T  30539245 tcccacatcggatagataagactcttgataagagtttataaaggcgagacactcctcaccttacaagccggttttgtaaggatga 30539329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 100 - 190
Target Start/End: Original strand, 19054503 - 19054594
Alignment:
Q  100 tcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttagtc 190  Q
    |||||||||||| |||||| |||||||| || |||||| | ||| ||| || ||||||||||   | |||||||| ||||||||||||||||    
T  19054503 tcccacatcggatagataacactcttgagaagagtttataaagatgaggcactcctcaccttacaagccggttttgtaaggatgagttagtc 19054594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 82 - 160
Target Start/End: Complemental strand, 21110084 - 21110005
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcacctt 160  Q
    |||||||||||  |||| |||||| ||||| |||||||| ||||| ||| |||||| ||||||||| |||||| ||||||    
T  21110084 tattgggaaaatcccatgtcccacgtcggatagataagattcttggtaagagtttatatagaggaggcaatccccacctt 21110005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 23 - 73
Target Start/End: Complemental strand, 5592580 - 5592530
Alignment:
Q  23 tgggcgtgacggccgattcacgcaccaaagcccaaagagtgctgggcgtga 73  Q
    |||| ||||||| ||||||||| |||||| || ||||||||||||||||||    
T  5592580 tgggtgtgacggtcgattcacgtaccaaaacctaaagagtgctgggcgtga 5592530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 35 - 73
Target Start/End: Complemental strand, 21109782 - 21109744
Alignment:
Q  35 ccgattcacgcaccaaagcccaaagagtgctgggcgtga 73  Q
    ||||||||||||| ||||||||||||||| |||||||||    
T  21109782 ccgattcacgcactaaagcccaaagagtgttgggcgtga 21109744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 35 - 73
Target Start/End: Complemental strand, 21109925 - 21109887
Alignment:
Q  35 ccgattcacgcaccaaagcccaaagagtgctgggcgtga 73  Q
    ||||||||||||| ||||||||||||||| |||||||||    
T  21109925 ccgattcacgcactaaagcccaaagagtgttgggcgtga 21109887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 127
Target Start/End: Complemental strand, 6623537 - 6623492
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttga 127  Q
    |||||||||||| |||  |||||||||||| |||||||||||||||    
T  6623537 tattgggaaaaacccaagtcccacatcggatagataagactcttga 6623492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 188
Target Start/End: Original strand, 8144027 - 8144116
Alignment:
Q  100 tcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    |||||||||||| |||||  |||||||| || |||||| | ||||||| || ||||||||||   | |||||||| ||||||||||||||    
T  8144027 tcccacatcggatagatagcactcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttag 8144116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 188
Target Start/End: Complemental strand, 10418432 - 10418343
Alignment:
Q  100 tcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    |||||||||||| |||||  ||||||||| | |||||| | ||||||| || ||||||||||   | |||||||| ||||||||||||||    
T  10418432 tcccacatcggatagatagcactcttgatgagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttag 10418343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 130
Target Start/End: Complemental strand, 12124847 - 12124758
Alignment:
Q  38 attcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgataa 130  Q
    ||||||||||  |||||||||||||| |||||||||  ||| |||||||||||||| | |  ||||||||| || |||| ||||| |||||||    
T  12124847 attcacgcac--aagcccaaagagtgttgggcgtgaaagga-tgtattgggaaaaacctaagtcccacatcagatagatgagactattgataa 12124758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 85 - 188
Target Start/End: Original strand, 30539415 - 30539519
Alignment:
Q  85 tgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatga 183  Q
    ||||||||| |||  |||||||||||| |||||||||| ||||||| |||||| | ||  ||| || |||||| ||| | | |||||||| ||||||||     
T  30539415 tgggaaaaacccaagtcccacatcggatagataagacttttgataagagtttataaaggtgaggcactcctcatcttataacccggttttgtaaggatgg 30539514  T
Q  184 gttag 188  Q
    |||||    
T  30539515 gttag 30539519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 38 - 160
Target Start/End: Original strand, 13462 - 13584
Alignment:
Q  38 attcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattgggaaaaatccatctcccacatcggacagataagactcttgataa-agttta 136  Q
    ||||||||||||| |||||||||||||||||||||| ||| ||||||||||||||| |||  ||||| |||||| ||| ||||||||||| || ||||||    
T  13462 attcacgcaccaa-gcccaaagagtgctgggcgtgaggggggtgtattgggaaaaacccaagtcccaaatcggatagacaagactcttgagaagagttta 13560  T
Q  137 aatagaggagacaatcctcacctt 160  Q
     | ||||||| |||||||||||||    
T  13561 taaagaggaggcaatcctcacctt 13584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 82 - 188
Target Start/End: Original strand, 13298 - 13405
Alignment:
Q  82 tattgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaagga 180  Q
    ||||||||||||  ||  |||||||||||| ||| ||||||||||| || |||||| | ||||||| |||||||||||||   | |||||||| | ||||    
T  13298 tattgggaaaaactcaggtcccacatcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtgagga 13397  T
Q  181 tgagttag 188  Q
    ||||||||    
T  13398 tgagttag 13405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1138 (Bit Score: 48; Significance: 3e-18; HSPs: 2)
Name: scaffold1138
Description:

Target: scaffold1138; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 35 - 188
Target Start/End: Complemental strand, 2032 - 1878
Alignment:
Q  35 ccgattcacgcaccaaagcccaaagagtgctgggcgtgatgggagtgtattg-ggaaaaatccatctcccacatcggacagataagactcttgataa-ag 132  Q
    |||||||||||||||| |||||||||||| ||||||||| ||| |||||||| | ||||| |||  || ||||||||| |||||||||||||||||| ||    
T  2032 ccgattcacgcaccaa-gcccaaagagtgttgggcgtgaggggggtgtattgagaaaaaacccaagtctcacatcggatagataagactcttgataagag 1934  T
Q  133 tttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    |||| |  |||||| || || |||||||   | |||||||| |||| |||||||||    
T  1933 tttataccgaggaggcactcttcaccttacaagccggttttgtaagcatgagttag 1878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1138; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 188
Target Start/End: Complemental strand, 2160 - 2084
Alignment:
Q  113 agataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    |||||| ||||||||||| |||||| ||||||||| |||||||||||||   | || ||||| ||||||||||||||    
T  2160 agataaaactcttgataagagtttatatagaggaggcaatcctcaccttacaagccagttttgtaaggatgagttag 2084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 100 - 188
Target Start/End: Original strand, 76862 - 76951
Alignment:
Q  100 tcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggatgagttag 188  Q
    |||||||||||| ||||||||||||||| || |||||| | ||||||| |||||||||||||   | |||||||| ||| ||||||||||    
T  76862 tcccacatcggatagataagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaagatgagttag 76951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0989 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0989
Description:

Target: scaffold0989; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 83 - 188
Target Start/End: Complemental strand, 3058 - 2952
Alignment:
Q  83 attgggaaaaatccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcaccttctgaaccggttttttaaggat 181  Q
    ||||||||||| |||  |||||||||||| ||| ||||||||||| || |||||| | ||||||| |||||||||| ||   | | |||||| |||||||    
T  3058 attgggaaaaacccaagtcccacatcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcactttacaagctggttttgtaaggat 2959  T
Q  182 gagttag 188  Q
    |||||||    
T  2958 gagttag 2952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 160
Target Start/End: Complemental strand, 21378 - 21296
Alignment:
Q  80 tgtattgggaaaa-atccatctcccacatcggacagataagactcttgataa-agtttaaatagaggagacaatcctcacctt 160  Q
    ||||||||||||| | |||  |||||||||||| ||| ||||||||||| || |||||| | ||||||| |||||||||||||    
T  21378 tgtattgggaaaatacccaagtcccacatcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcacctt 21296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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