View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8556_high_25 (Length: 261)
Name: NF8556_high_25
Description: NF8556
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8556_high_25 |
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Alignment Details
Target: chr2 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 18 - 244
Target Start/End: Original strand, 45417726 - 45417952
Alignment:
| Q |
18 |
acatcatgcaccaccaccacctccgcactactcgccgggaccagttcagaaactaaattctcctcccactcccgctgcagacattctgagacatcatcga |
117 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| |
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| T |
45417726 |
acatcatgcaccaccaccacctccgcactactcgccgggaccagttcagaaactaaattctcctcccactcccgccgcagacgttctgagacatcatcga |
45417825 |
T |
|
| Q |
118 |
cactcaccaccacctcctccccaatataatccaggaccaactccagggcttttaattctgccagcaacttctggaaacccaacagctcggaaacatattt |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45417826 |
cactcaccaccacctcctccccaatataatccaggaccaactccagggcttttaattctgccagcaacttctggaaacccaacagctcggaaacatattt |
45417925 |
T |
|
| Q |
218 |
tgtaccagaattctcctcctaatatct |
244 |
Q |
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||||||||||||||||||||||||||| |
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| T |
45417926 |
tgtaccagaattctcctcctaatatct |
45417952 |
T |
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