View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8556_low_48 (Length: 237)

Name: NF8556_low_48
Description: NF8556
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8556_low_48
NF8556_low_48
[»] chr6 (27 HSPs)
chr6 (1-222)||(11296129-11296349)
chr6 (1-162)||(35027184-35027344)
chr6 (1-159)||(28894535-28894692)
chr6 (3-162)||(15578966-15579124)
chr6 (1-156)||(34502250-34502404)
chr6 (1-154)||(28117747-28117899)
chr6 (1-154)||(9313844-9313996)
chr6 (1-162)||(12746713-12746876)
chr6 (1-162)||(17696496-17696658)
chr6 (16-162)||(33679240-33679386)
chr6 (1-156)||(5618274-5618425)
chr6 (1-155)||(2331189-2331342)
chr6 (1-162)||(17231763-17231923)
chr6 (1-156)||(11410672-11410826)
chr6 (1-158)||(22920436-22920592)
chr6 (16-162)||(3826869-3827015)
chr6 (3-155)||(2330539-2330690)
chr6 (74-154)||(14969690-14969770)
chr6 (24-154)||(14966160-14966290)
chr6 (23-156)||(7560232-7560365)
chr6 (80-156)||(31123418-31123494)
chr6 (83-154)||(16731362-16731433)
chr6 (1-95)||(14969575-14969668)
chr6 (104-156)||(7560156-7560208)
chr6 (1-61)||(13095850-13095909)
chr6 (1-57)||(31262678-31262733)
chr6 (1-42)||(5618480-5618520)
[»] chr7 (30 HSPs)
chr7 (1-162)||(6964194-6964354)
chr7 (1-162)||(44017843-44018003)
chr7 (1-162)||(43549100-43549260)
chr7 (1-162)||(38431300-38431460)
chr7 (1-162)||(26153058-26153218)
chr7 (1-161)||(3541220-3541379)
chr7 (1-154)||(22083502-22083654)
chr7 (3-156)||(8257797-8257949)
chr7 (1-162)||(22257165-22257325)
chr7 (6-162)||(8257638-8257793)
chr7 (1-158)||(710072-710228)
chr7 (1-95)||(12803383-12803476)
chr7 (1-162)||(5826759-5826919)
chr7 (1-154)||(8397752-8397904)
chr7 (1-162)||(20100551-20100711)
chr7 (1-162)||(22232678-22232838)
chr7 (1-162)||(22253901-22254061)
chr7 (7-162)||(2349372-2349526)
chr7 (1-158)||(26460373-26460528)
chr7 (1-158)||(2251778-2251934)
chr7 (32-156)||(23467225-23467349)
chr7 (32-162)||(16546940-16547070)
chr7 (32-162)||(16618592-16618722)
chr7 (21-162)||(748092-748233)
chr7 (1-158)||(23598818-23598974)
chr7 (1-154)||(11825414-11825566)
chr7 (1-156)||(26182209-26182363)
chr7 (83-154)||(6214434-6214505)
chr7 (104-162)||(42606293-42606350)
chr7 (104-156)||(26808787-26808839)
[»] chr5 (23 HSPs)
chr5 (1-162)||(33320975-33321135)
chr5 (1-162)||(2500059-2500219)
chr5 (1-156)||(19686077-19686231)
chr5 (1-154)||(17944558-17944710)
chr5 (1-162)||(26337890-26338050)
chr5 (1-162)||(34652806-34652966)
chr5 (1-162)||(9690670-9690830)
chr5 (1-156)||(19689460-19689614)
chr5 (1-162)||(26548001-26548161)
chr5 (1-162)||(26551560-26551720)
chr5 (1-162)||(28562410-28562570)
chr5 (1-162)||(28565978-28566138)
chr5 (1-162)||(4731882-4732042)
chr5 (16-156)||(2453204-2453344)
chr5 (1-162)||(40799967-40800127)
chr5 (74-162)||(3195073-3195161)
chr5 (1-93)||(1810528-1810619)
chr5 (1-95)||(33921049-33921142)
chr5 (1-158)||(26726853-26727009)
chr5 (84-156)||(35432547-35432619)
chr5 (1-140)||(25185294-25185432)
chr5 (124-156)||(1810489-1810521)
chr5 (104-156)||(36335167-36335219)
[»] chr4 (19 HSPs)
chr4 (1-162)||(13979041-13979201)
chr4 (1-162)||(15851080-15851240)
chr4 (1-162)||(26703542-26703702)
chr4 (16-162)||(19928808-19928947)
chr4 (1-156)||(11702644-11702798)
chr4 (1-158)||(14701813-14701969)
chr4 (1-162)||(18859686-18859846)
chr4 (1-158)||(49636579-49636734)
chr4 (1-158)||(3719551-3719707)
chr4 (1-158)||(3734221-3734376)
chr4 (1-158)||(49639872-49640027)
chr4 (1-156)||(10247728-10247877)
chr4 (1-149)||(33400392-33400537)
chr4 (3-156)||(10385854-10385995)
chr4 (1-61)||(56089466-56089525)
chr4 (104-162)||(17670322-17670380)
chr4 (74-156)||(23653254-23653336)
chr4 (80-154)||(11560799-11560873)
chr4 (83-153)||(24605307-24605377)
[»] scaffold0273 (1 HSPs)
scaffold0273 (1-162)||(19807-19967)
[»] chr8 (22 HSPs)
chr8 (1-162)||(13331996-13332156)
chr8 (1-160)||(39660010-39660168)
chr8 (1-156)||(20262463-20262617)
chr8 (1-156)||(21049093-21049247)
chr8 (1-162)||(5827934-5828094)
chr8 (1-156)||(30645381-30645535)
chr8 (16-162)||(18696026-18696172)
chr8 (1-162)||(14187909-14188069)
chr8 (1-158)||(17013087-17013243)
chr8 (1-162)||(22654170-22654330)
chr8 (1-154)||(5964164-5964316)
chr8 (1-158)||(17543958-17544114)
chr8 (1-158)||(24903539-24903695)
chr8 (1-156)||(31981256-31981410)
chr8 (1-74)||(9467035-9467107)
chr8 (16-161)||(24434953-24435098)
chr8 (16-161)||(24444999-24445144)
chr8 (75-156)||(27863611-27863692)
chr8 (1-95)||(31984897-31984990)
chr8 (83-154)||(587302-587373)
chr8 (83-154)||(626549-626620)
chr8 (107-156)||(31986288-31986337)
[»] chr3 (32 HSPs)
chr3 (1-162)||(28327351-28327511)
chr3 (1-162)||(28330676-28330836)
chr3 (1-162)||(27054778-27054939)
chr3 (1-162)||(3305757-3305917)
chr3 (1-162)||(4250293-4250453)
chr3 (1-162)||(4225902-4226062)
chr3 (1-155)||(18883121-18883274)
chr3 (1-156)||(42354468-42354622)
chr3 (3-156)||(9154725-9154877)
chr3 (1-156)||(19868890-19869044)
chr3 (1-162)||(6173402-6173562)
chr3 (23-162)||(18551597-18551736)
chr3 (1-162)||(2784029-2784189)
chr3 (3-156)||(9157898-9158050)
chr3 (1-162)||(10959808-10959968)
chr3 (1-162)||(10963315-10963475)
chr3 (1-162)||(10966824-10966984)
chr3 (1-158)||(5887038-5887193)
chr3 (1-158)||(5897022-5897177)
chr3 (1-162)||(2279669-2279829)
chr3 (1-158)||(16414809-16414965)
chr3 (1-162)||(25888519-25888679)
chr3 (7-158)||(16314643-16314793)
chr3 (7-158)||(18495637-18495787)
chr3 (1-158)||(18515783-18515939)
chr3 (1-158)||(23374783-23374939)
chr3 (1-154)||(30158086-30158242)
chr3 (1-158)||(29233642-29233797)
chr3 (1-156)||(54736185-54736341)
chr3 (73-156)||(20536640-20536723)
chr3 (1-95)||(44508716-44508809)
chr3 (104-154)||(36037014-36037064)
[»] chr2 (16 HSPs)
chr2 (1-162)||(40677823-40677983)
chr2 (1-162)||(38316098-38316258)
chr2 (1-154)||(30719682-30719834)
chr2 (1-156)||(1503490-1503644)
chr2 (1-156)||(1506694-1506848)
chr2 (16-162)||(15719325-15719471)
chr2 (16-162)||(29435672-29435818)
chr2 (18-162)||(15704021-15704165)
chr2 (1-158)||(18938802-18938957)
chr2 (1-154)||(11059707-11059859)
chr2 (1-156)||(38326322-38326482)
chr2 (1-154)||(13518212-13518363)
chr2 (33-162)||(11056280-11056409)
chr2 (74-156)||(4577804-4577886)
chr2 (1-158)||(22592422-22592577)
chr2 (1-162)||(18011858-18012010)
[»] chr1 (18 HSPs)
chr1 (1-162)||(18392300-18392459)
chr1 (1-162)||(34552735-34552895)
chr1 (1-162)||(23441335-23441495)
chr1 (1-162)||(33898233-33898393)
chr1 (1-162)||(3087776-3087936)
chr1 (1-162)||(20981267-20981427)
chr1 (1-158)||(50197014-50197171)
chr1 (1-162)||(49719762-49719922)
chr1 (1-162)||(49716278-49716440)
chr1 (1-162)||(17902839-17902998)
chr1 (1-162)||(28918282-28918442)
chr1 (1-158)||(16838989-16839144)
chr1 (1-158)||(16848919-16849074)
chr1 (1-154)||(37641775-37641927)
chr1 (1-162)||(20964364-20964523)
chr1 (1-158)||(24200299-24200455)
chr1 (68-162)||(6205853-6205948)
chr1 (1-74)||(6195725-6195797)
[»] scaffold0083 (2 HSPs)
scaffold0083 (1-162)||(29229-29389)
scaffold0083 (1-162)||(53026-53186)
[»] scaffold0401 (1 HSPs)
scaffold0401 (1-162)||(4166-4326)
[»] scaffold0360 (2 HSPs)
scaffold0360 (1-162)||(6193-6353)
scaffold0360 (74-162)||(2433-2521)
[»] scaffold0134 (1 HSPs)
scaffold0134 (1-153)||(7145-7296)
[»] scaffold0043 (2 HSPs)
scaffold0043 (3-162)||(13501-13659)
scaffold0043 (131-162)||(5633-5664)
[»] scaffold0214 (3 HSPs)
scaffold0214 (1-150)||(13514-13662)
scaffold0214 (1-150)||(27530-27678)
scaffold0214 (1-156)||(19963-20117)
[»] scaffold0062 (2 HSPs)
scaffold0062 (16-162)||(67882-68028)
scaffold0062 (18-162)||(52933-53077)
[»] scaffold1048 (1 HSPs)
scaffold1048 (1-158)||(1309-1465)
[»] scaffold0175 (1 HSPs)
scaffold0175 (1-155)||(28717-28871)
[»] scaffold0012 (1 HSPs)
scaffold0012 (1-158)||(26933-27090)
[»] scaffold0007 (1 HSPs)
scaffold0007 (85-162)||(92423-92500)
[»] scaffold0067 (1 HSPs)
scaffold0067 (1-161)||(27269-27428)
[»] scaffold0014 (2 HSPs)
scaffold0014 (1-95)||(227255-227348)
scaffold0014 (107-156)||(228646-228695)


Alignment Details
Target: chr6 (Bit Score: 178; Significance: 4e-96; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 11296349 - 11296129
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| | ||    
T  11296349 tgtttaattcaacat-aggaacctagagatgggaaattgaagattatgacttatgaattaatgttctcaccatgcttccgcggttattcaatcggtttta 11296251  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaaccacttacttacatatgtatggaatgaaaaacacacacatggaga 200  Q
    || ||||||| ||||||| |||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11296250 gagattaaaatgttataatttgagaaagggttttgaatcaagagattgatcaaaaccacttacttacatatgtatggaatgaaaaacacacacatggaga 11296151  T
Q  201 acgaaacttgatcacatatata 222  Q
    ||||||||||||||||||||||    
T  11296150 acgaaacttgatcacatatata 11296129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 35027344 - 35027184
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||||||| ||| |||||||| |||||||||||||||||||| |  |    
T  35027344 tgtttaattcaacat-aggaacctagagataggaaattgacgattatgacttatgaattaacgttctcaccatggttccgcggttattcaatcggtttaa 35027246  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaaccactta 162  Q
    || ||||||||||||||||||  |||||| ||||||||||||||||||||||||||||||||    
T  35027245 gagattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaaaccactta 35027184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 28894692 - 28894535
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||||||||||||| || ||||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||||||| || |  |    
T  28894692 tgtttaattcaacat-agaaacctagagataggaaattgaggattatgacttatgaattaacgttctcaccatgcttctgcggttattcaattggtttaa 28894594  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaaccac 159  Q
    || ||||||| ||||||||||  |||||| |||||||||||||||||||||||||||||    
T  28894593 gagattaaaatgttataacttaggaaagggttttgagtcaagagattgatcaaaaccac 28894535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 3 - 162
Target Start/End: Complemental strand, 15579124 - 15578966
Alignment:
Q  3 tttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctctaga 102  Q
    ||||||||||||| | ||||||||||||  ||||||||| ||||||||||||| ||||| ||| |||||||||||||| |||||||||||||| |  |||    
T  15579124 tttaattcaacat-atgaacctagagataagaaattgagaattatgacttatggattaacgttctcaccatgcttccgtggttattcaatcggtttaaga 15579026  T
Q  103 aattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaaccactta 162  Q
     |||||||| |||||||||  |||||| ||||||||||||||||||||||||||||||||    
T  15579025 gattaaaagattataacttaggaaagggttttgagtcaagagattgatcaaaaccactta 15578966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 34502250 - 34502404
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||||||||||||| ||||||||||||||  |||||||||||||||| | |||||||||| ||| | ||   |||||||||||||||||||||| |  |    
T  34502250 tgtttaattcaacat-aggaacctagagatatgaaattgaggattatggcatatgaattaacgttctgacatcgcttccgcggttattcaatcggtttaa 34502348  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaac 156  Q
    || ||||||||||||||||||  |||||| ||||||||||||||||||||||||||    
T  34502349 gagattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaaac 34502404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 28117747 - 28117899
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||||||||||||| |||||||||||||| ||||||||||| ||||||| |||||||||| ||| | ||   ||||| |||||||||||||||| |  |    
T  28117747 tgtttaattcaacat-aggaacctagagataggaaattgagggttatgacatatgaattaacgttctgacatcgcttctgcggttattcaatcggtttaa 28117845  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaa 154  Q
    || ||||||||||||||||||  |||||| ||||||||||||||||||||||||    
T  28117846 gagattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaa 28117899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 9313996 - 9313844
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||||||||||||| |||||||||||||| ||||||||||| ||||||| |||||||||| |||   ||   |||||||| ||||||||||||| |  |    
T  9313996 tgtttaattcaacat-aggaacctagagataggaaattgagggttatgacatatgaattaacgttccgacatcgcttccgcagttattcaatcggtttaa 9313898  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaa 154  Q
    || ||||||||||||||||||  |||||| ||||||||||||||||||||||||    
T  9313897 gatattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaa 9313844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 12746713 - 12746876
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||||||||||||| | |||||||||||| ||||||||||  |||||||||||||||||| ||| | ||   |||||| ||||||||||||||| |  |    
T  12746713 tgtttaattcaacat-atgaacctagagataggaaattgagagttatgacttatgaattaacgttctgacatagcttccacggttattcaatcggtttaa 12746811  T
Q  101 gaa---attaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaaccactta 162  Q
     ||   ||||||||||||||||||  |||||| ||||||||||||||||||||||||||||||||    
T  12746812 taagagattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaaaccactta 12746876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 17696496 - 17696658
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||||| |||||| ||||||||||||||| ||||||||||| ||||||| ||| |||||| ||| | ||  ||||||||||||||||||||| | | ||    
T  17696496 tgtttaactcaacactaggaacctagagataggaaattgagggttatgacatataaattaacgttctgactttgcttccgcggttattcaatctgattta 17696595  T
Q  101 gaaattaaaag-gttataacttgagaaaggattttgagtcaagagattgatcaaaaccactta 162  Q
    || ||||| || ||||||||||   ||||| |||||||||||||||||||||||| |||||||    
T  17696596 gagattaatagagttataacttagtaaagggttttgagtcaagagattgatcaaagccactta 17696658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 162
Target Start/End: Complemental strand, 33679386 - 33679240
Alignment:
Q  16 taggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctctagaaattaaaaggtta 115  Q
    |||||||||||| || | ||||||| | ||||||| |||| ||||| ||| ||||||||||||||| ||||||||||||| |  ||| ||||||| ||||    
T  33679386 taggaacctagatatagaaaattgaaggttatgacatatggattaacgttctcaccatgcttccgcagttattcaatcggtttaagagattaaaatgtta 33679287  T
Q  116 taacttgagaaaggattttgagtcaagagattgatcaaaaccactta 162  Q
    ||||||  |||||| |||||||| |||||||||||||||||||||||    
T  33679286 taacttacgaaagggttttgagttaagagattgatcaaaaccactta 33679240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 5618425 - 5618274
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||||||||||||| |||||||||||||| ||||||||||| ||||||  |||||||||| ||| | ||   ||||| |||||||||||||||| |  |    
T  5618425 tgtttaattcaacat-aggaacctagagataggaaattgagg-ttatga--tatgaattaacgttctgacatcgcttctgcggttattcaatcggtttaa 5618330  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaac 156  Q
    || ||||||||||||||||||  |||||| |||||||| |||||||||||||||||    
T  5618329 gagattaaaaggttataacttaggaaagggttttgagtgaagagattgatcaaaac 5618274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 2331189 - 2331342
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||||||||||| | ||||||||||||||  |||||||||| ||||||| |||||||||| ||| | ||   |||||||| ||||||||||||  |  |    
T  2331189 tgtttaattcaacgt-aggaacctagagataagaaattgagggttatgacctatgaattaacgttctgacatagcttccgcagttattcaatcgatttaa 2331287  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaa 155  Q
    || ||||||||||||||||||  |||| | |||||||||||||||||||||||||    
T  2331288 gagattaaaaggttataacttaggaaatggttttgagtcaagagattgatcaaaa 2331342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 17231763 - 17231923
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||| ||||||||| |||||||||||||| | |||||||| || ||||| |||||||||| ||| | ||   |||||||||||||||||||  | |  |    
T  17231763 tgtttgattcaacat-aggaacctagagatagaaaattgagaatcatgacatatgaattaacgttctgacatcgcttccgcggttattcaattagtttaa 17231861  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaaccactta 162  Q
    || ||||||||||||| ||||  |||||| |||||||||||||||||||||||||| |||||    
T  17231862 gagattaaaaggttatgacttaggaaagggttttgagtcaagagattgatcaaaactactta 17231923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 11410672 - 11410826
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||| ||||||||| |||| ||||||||| |||||||  | || ||||| ||||||||||  || | ||   |||||||||||||||||||||| |  |    
T  11410672 tgtttgattcaacat-aggatcctagagataggaaattaggaatcatgacatatgaattaacattctgacatcgcttccgcggttattcaatcggtttaa 11410770  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaac 156  Q
    || ||||||||||||||||||  |||||| ||||||||||||||||||||||||||    
T  11410771 gagattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaaac 11410826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 22920436 - 22920592
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||| ||||||||| |||||||||||||| |||||||||| |||||||| |||||||||| ||| |      ||||| || ||||||||||||| |  |    
T  22920436 tgtttgattcaacat-aggaacctagagataggaaattgagaattatgacatatgaattaacgttcttttatcgcttctgcagttattcaatcggtttaa 22920534  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaacca 158  Q
    || ||||||||||||||||||  |||||| |||||| |||||||||||||||| ||||    
T  22920535 gagattaaaaggttataacttaggaaagggttttgattcaagagattgatcaacacca 22920592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 162
Target Start/End: Complemental strand, 3827015 - 3826869
Alignment:
Q  16 taggaacctagagatgggaaattgaggattatgacttatgaattaatgt--tttcaccatgcttccgcggttattcaatcggctctagaaattaaaaggt 113  Q
    ||||||||||||||| |||||||||||||||||||  ||||||||| ||  ||| | |   |||  |||||||||||||||| |  ||| |||||||| |    
T  3827015 taggaacctagagataggaaattgaggattatgacacatgaattaacgtacttttatcc--cttttgcggttattcaatcggtttaagagattaaaagat 3826918  T
Q  114 tataacttgagaaaggattttgagtcaagagattgatcaaaaccactta 162  Q
    ||||||||  |||||| |||||||||||||||||||||||||| |||||    
T  3826917 tataacttaggaaagggttttgagtcaagagattgatcaaaactactta 3826869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 155
Target Start/End: Original strand, 2330539 - 2330690
Alignment:
Q  3 tttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctctaga 102  Q
    ||||||||||||| |||||||||||||| ||||||||||| ||||||| ||| |||||| ||| | ||   |||| ||| ||||||||||||| |  | |    
T  2330539 tttaattcaacat-aggaacctagagataggaaattgagggttatgacatataaattaacgttctgacatagctttcgcagttattcaatcggtttaata 2330637  T
Q  103 aattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaa 155  Q
     ||||||||||||||||||  |||| | |||| |||||||||||| |||||||    
T  2330638 gattaaaaggttataacttatgaaatggttttcagtcaagagattaatcaaaa 2330690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 74 - 154
Target Start/End: Original strand, 14969690 - 14969770
Alignment:
Q  74 gcttccgcggttattcaatcggctctagaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaa 154  Q
    |||||||||||||||||||||| |  ||| |||||||||||||||| |  |||||||||||||||||||||||||||||||    
T  14969690 gcttccgcggttattcaatcggtttaagagattaaaaggttataacctatgaaaggattttgagtcaagagattgatcaaa 14969770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 24 - 154
Target Start/End: Original strand, 14966160 - 14966290
Alignment:
Q  24 tagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctctagaaattaaaaggttataacttga 123  Q
    ||||||| ||||||||||||| |||||| ||||||||| ||| |      |||||||||||||||||||||| |  ||| |||||||||||||||| |      
T  14966160 tagagataggaaattgaggatcatgactcatgaattaacgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaaggttataacctag 14966259  T
Q  124 gaaaggattttgagtcaagagattgatcaaa 154  Q
    ||||||  |||||||||||||||||||||||    
T  14966260 gaaaggggtttgagtcaagagattgatcaaa 14966290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 156
Target Start/End: Complemental strand, 7560365 - 7560232
Alignment:
Q  23 ctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctctagaaattaaaaggttataacttg 122  Q
    |||||||| |||| ||| |  |||||||||| ||||||| |||   |||  |||||||| ||||||||||||| |  ||| |||||||||||||| |||     
T  7560365 ctagagataggaagttgcgagttatgacttaggaattaacgttcaaacctggcttccgcagttattcaatcggtttaagagattaaaaggttatagctta 7560266  T
Q  123 agaaaggattttgagtcaagagattgatcaaaac 156  Q
     |||||  ||||||||||||||||||||||||||    
T  7560265 ggaaagagttttgagtcaagagattgatcaaaac 7560232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 80 - 156
Target Start/End: Original strand, 31123418 - 31123494
Alignment:
Q  80 gcggttattcaatcggctctagaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaac 156  Q
    |||||||||||||||| |  ||| ||||||||||||||||||  |||||| |||||||| |||||||||||||||||    
T  31123418 gcggttattcaatcggtttaagagattaaaaggttataacttaggaaagggttttgagttaagagattgatcaaaac 31123494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 83 - 154
Target Start/End: Original strand, 16731362 - 16731433
Alignment:
Q  83 gttattcaatcggctctagaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaa 154  Q
    |||||||||||||||  ||| |||||||||||||||| |  ||||||| |||||||||||||||||||||||    
T  16731362 gttattcaatcggcttaagagattaaaaggttataacctaggaaaggactttgagtcaagagattgatcaaa 16731433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 14969575 - 14969668
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcgg 95  Q
    ||||| ||||||||| |||||||||||||| ||||||||||||| |||||| ||||||||| ||| |      ||||||||||||||||||||||    
T  14969575 tgtttgattcaacat-aggaacctagagataggaaattgaggatcatgactcatgaattaacgttcttttatcgcttccgcggttattcaatcgg 14969668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 7560208 - 7560156
Alignment:
Q  104 attaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaac 156  Q
    ||||||||||||||||||  |||||  ||||||||||||||||||||||||||    
T  7560208 attaaaaggttataacttaggaaagagttttgagtcaagagattgatcaaaac 7560156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 13095909 - 13095850
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaa 61  Q
    ||||| ||||||||| |||||||||||||| |||||||||| || ||||| ||||||||||    
T  13095909 tgtttgattcaacat-aggaacctagagataggaaattgagaatcatgacatatgaattaa 13095850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 31262678 - 31262733
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaa 57  Q
    ||||||||||||||| |||||||||||||| | ||||||||| ||||||| ||||||    
T  31262678 tgtttaattcaacat-aggaacctagagatagaaaattgagggttatgacatatgaa 31262733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 5618520 - 5618480
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgagg 42  Q
    ||||||||||||||| |||||||||||||| |||||||||||    
T  5618520 tgtttaattcaacat-aggaacctagagataggaaattgagg 5618480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 118; Significance: 2e-60; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 6964194 - 6964354
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| |  |    
T  6964194 tgtttaattcaacat-aggaacctagagataggaaattgaggattatgacttatgaattaacgttctcaccatgcttccgcggttattcaatcggtttaa 6964292  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaaccactta 162  Q
    || ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  6964293 gagattaaaaggttataacttaggaaaggattttgagtcaagagattgatcaaaaccactta 6964354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 44018003 - 44017843
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||| |  |    
T  44018003 tgtttaattcaacat-aggaacctagagataggaaattgaggattatgacttatgaattaacgttctcaccatgcttccgcgattattcaatcggtttaa 44017905  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaaccactta 162  Q
    || ||||||||||||||| ||  |||||| ||||| ||||||||||||||||||||||||||    
T  44017904 gagattaaaaggttataatttaggaaagggttttgtgtcaagagattgatcaaaaccactta 44017843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 43549100 - 43549260
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||||||||||||| ||||| ||| |||| ||||||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||| |  |    
T  43549100 tgtttaattcaacat-aggaatctaaagataggaaattgaggattatgacttatgaatcaacgttctcaccatgcttccgcggttattcaatcggtttaa 43549198  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaaccactta 162  Q
    || ||||||| ||||||||||  |||||| ||||||||||||||||||||||||||||||||    
T  43549199 gagattaaaatgttataacttaggaaagggttttgagtcaagagattgatcaaaaccactta 43549260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 38431300 - 38431460
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| ||| |||||||| ||  |||||||||||||||| |  |    
T  38431300 tgtttaattcaacat-aggaacctagagataggaaattgaggattatgacttatgaattaaggttctcaccatgtttatgcggttattcaatcggtttaa 38431398  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaaccactta 162  Q
    || |||||||||||||||||   |||| | ||||||||||||||||||||||||||||||||    
T  38431399 gagattaaaaggttataactgaggaaatggttttgagtcaagagattgatcaaaaccactta 38431460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 26153058 - 26153218
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||| ||||||||| |||||| ||||||| |||||||||||||||||||||||||||||| ||| ||| ||| ||||||| ||||||||||| | |  |    
T  26153058 tgttttattcaacat-aggaacttagagataggaaattgaggattatgacttatgaattaacgttctcatcatacttccgcagttattcaatcagtttaa 26153156  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaaccactta 162  Q
    || ||||||||||||| ||||  |||||| ||||||||||||||||| ||||||||||||||    
T  26153157 gagattaaaaggttatgacttaggaaagggttttgagtcaagagattaatcaaaaccactta 26153218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 3541379 - 3541220
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||||||||||||| |||||||||||||| ||||||||||  |||||||||||||||||| ||| | ||   |||||| ||||||||||||| | |  |    
T  3541379 tgtttaattcaacat-aggaacctagagataggaaattgagagttatgacttatgaattaacgttctaacatagcttccacggttattcaatcagtttca 3541281  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaaccactt 161  Q
    || ||||||||||||||||||  |||||| |||||||||||||||||||||||||||||||    
T  3541280 gagattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaaaccactt 3541220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 22083654 - 22083502
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||||||||||||| |||||||||||||| ||||||||||| ||||||| |||||||||| ||| | ||   |||||||||||||||||||| |||  |    
T  22083654 tgtttaattcaacat-aggaacctagagataggaaattgagggttatgacatatgaattaacgttctgacatcgcttccgcggttattcaatctgcttaa 22083556  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaa 154  Q
    || ||||||| ||||||||||  |||||| ||||||||||||||||||||||||    
T  22083555 gagattaaaatgttataacttaggaaagggttttgagtcaagagattgatcaaa 22083502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 3 - 156
Target Start/End: Original strand, 8257797 - 8257949
Alignment:
Q  3 tttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctctaga 102  Q
    ||||||||||||| ||||| |||||||| ||| ||||||| ||||||| |||||||||||||| | ||   ||||| |||||||||||||||| |  |||    
T  8257797 tttaattcaacat-aggaatctagagataggagattgagggttatgacatatgaattaatgttctgacatcgcttctgcggttattcaatcggtttaaga 8257895  T
Q  103 aattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaac 156  Q
     ||||||||||||||||||  |||||| ||||||||||||||||||||||||||    
T  8257896 gattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaaac 8257949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 22257165 - 22257325
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgt--tttcaccatgcttccgcggttattcaatcggctc 98  Q
    ||||| ||||||||| |||||||||||||| ||||||||||||| |||||  ||||||||| ||  ||| | |  |||||||||||||||||||||| |     
T  22257165 tgtttgattcaacat-aggaacctagagataggaaattgaggatcatgacacatgaattaacgtacttttatc--gcttccgcggttattcaatcggttt 22257261  T
Q  99 tagaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaaccactta 162  Q
     ||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||    
T  22257262 aagagattaaaaggttataacttaagaaagggttttgagtcaagagattgatcaaaactactta 22257325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 6 - 162
Target Start/End: Complemental strand, 8257793 - 8257638
Alignment:
Q  6 aattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctctagaaat 105  Q
    |||||||||| ||||| |||||||| ||| |||||||||||||||  ||||| ||||||| |     ||||||||||||||||||||||| |  ||| ||    
T  8257793 aattcaacat-aggaatctagagataggagattgaggattatgacacatgaaataatgttctgttattgcttccgcggttattcaatcggtttaagagat 8257695  T
Q  106 taaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaaccactta 162  Q
    ||||||||||||||||  |||||| ||||||||||||||||||||||||||||||||    
T  8257694 taaaaggttataacttaggaaagggttttgagtcaagagattgatcaaaaccactta 8257638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 710228 - 710072
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||| ||||||||| |||||||||||||| |||||||||| || ||||| |||||||||| ||  | ||  ||||||||||||||||||||||| |  |    
T  710228 tgtttgattcaacat-aggaacctagagataggaaattgagaatcatgacatatgaattaacgtcctgacattgcttccgcggttattcaatcggtttaa 710130  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaacca 158  Q
    || ||||||||||||||||||  |||| | |||||| |||||||||||||||||||||    
T  710129 gagattaaaaggttataacttaggaaaaggttttgattcaagagattgatcaaaacca 710072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 12803476 - 12803383
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcgg 95  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||||| |||||||| ||| ||||||||||||| |||||||||||||||    
T  12803476 tgtttaattcaacat-aggaacctagagataggaaattgaggattatgacttgtgaattaacgttctcaccatgcttcctcggttattcaatcgg 12803383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 5826919 - 5826759
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgt--tttcaccatgcttccgcggttattcaatcggctc 98  Q
    ||||| ||||||||| |||||||||||||| ||||||||||||| |||||| ||||||||| ||  ||| | |  ||||| |||||||||||||||| |     
T  5826919 tgtttgattcaacat-aggaacctagagataggaaattgaggatcatgactcatgaattaacgtacttttatc--gcttctgcggttattcaatcggttt 5826823  T
Q  99 tagaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaaccactta 162  Q
     ||| |||||||| |||||||||  |||||| |||||||||||||||||||||||||| |||||    
T  5826822 aagagattaaaagattataacttaggaaagggttttgagtcaagagattgatcaaaactactta 5826759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 8397752 - 8397904
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||| ||||||||| |||||||||||||| ||||||||||||| |||||| ||||||||| ||| |      |||||||||||||||||||||| |  |    
T  8397752 tgtttgattcaacat-aggaacctagagataggaaattgaggatcatgactcatgaattaacgttcttttatcgcttccgcggttattcaatcggtttaa 8397850  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaa 154  Q
    || |||||||||||||| |||  |||||| ||||||||||||||||||||||||    
T  8397851 gagattaaaaggttatagcttaggaaagggttttgagtcaagagattgatcaaa 8397904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 20100551 - 20100711
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgt--tttcaccatgcttccgcggttattcaatcggctc 98  Q
    ||||| ||||||||| |||||||||||||| ||||||||| |||| ||||  ||||||||| ||  ||| | |  |||||||||||||||||||||| |     
T  20100551 tgtttgattcaacat-aggaacctagagataggaaattgaagattgtgacacatgaattaacgtacttttatc--gcttccgcggttattcaatcggttt 20100647  T
Q  99 tagaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaaccactta 162  Q
     ||| ||||||||||||||||||  |||||| |||||||||||||||||||||||||| |||||    
T  20100648 aagagattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaaactactta 20100711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 22232838 - 22232678
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgt--tttcaccatgcttccgcggttattcaatcggctc 98  Q
    ||||| ||||||||| || |||||||||||  |||||||||||| |||||  ||||||||| ||  ||| | |  |||||||||||||||||||||| |     
T  22232838 tgtttgattcaacat-agaaacctagagataagaaattgaggatcatgacacatgaattaacgtacttttatc--gcttccgcggttattcaatcggttt 22232742  T
Q  99 tagaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaaccactta 162  Q
     ||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||    
T  22232741 aagagattaaaaggttataacttaagaaagggttttgagtcaagagattgatcaaaactactta 22232678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 22253901 - 22254061
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgt--tttcaccatgcttccgcggttattcaatcggctc 98  Q
    ||||| ||||||||| || |||||||||||  |||||||||||| |||||  ||||||||| ||  ||| | |  |||||||||||||||||||||| |     
T  22253901 tgtttgattcaacat-agaaacctagagataagaaattgaggatcatgacacatgaattaacgtacttttatc--gcttccgcggttattcaatcggttt 22253997  T
Q  99 tagaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaaccactta 162  Q
     ||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||    
T  22253998 aagagattaaaaggttataacttaagaaagggttttgagtcaagagattgatcaaaactactta 22254061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 7 - 162
Target Start/End: Original strand, 2349372 - 2349526
Alignment:
Q  7 attcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctctagaaatt 106  Q
    ||||||||| |||||||||||||| |||||||||||||||||||  ||||||||| ||| |      |||||||||||||||||||||| |  ||| |||    
T  2349372 attcaacat-aggaacctagagataggaaattgaggattatgacacatgaattaacgttcttttatcgcttccgcggttattcaatcggtttaagagatt 2349470  T
Q  107 aaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaaccactta 162  Q
    |||| ||||||||||  |||||| ||||||||| |||||||||||||||| |||||    
T  2349471 aaaaagttataacttaggaaagggttttgagtcgagagattgatcaaaactactta 2349526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 26460373 - 26460528
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgtt-ttcaccatgcttccgcggttattcaatcggctct 99  Q
    ||||| ||||||||| |||||||||||||| |||||||||| || ||||| |||||||||| ||| || | |  |||||||| ||||||||||||| |      
T  26460373 tgtttgattcaacat-aggaacctagagataggaaattgagaatcatgacatatgaattaacgttatttatc--gcttccgcagttattcaatcggttta 26460469  T
Q  100 agaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaacca 158  Q
    ||| ||||||||||||||||||  |||||| |||||| |||||||||||||||||||||    
T  26460470 agagattaaaaggttataacttaggaaagggttttgattcaagagattgatcaaaacca 26460528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 2251778 - 2251934
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||| ||||||||| |||||||||||||| |||||||||| || ||||| |||||||||| ||| |      |||||||| ||||||||||||| |  |    
T  2251778 tgtttgattcaacat-aggaacctagagataggaaattgagaatcatgacatatgaattaacgttcttttatcgcttccgcagttattcaatcggtttaa 2251876  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaacca 158  Q
    || ||||||||||||||||||  |||||| |||||| |||||||||||||||||||||    
T  2251877 gagattaaaaggttataacttaggaaagggttttgattcaagagattgatcaaaacca 2251934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 32 - 156
Target Start/End: Complemental strand, 23467349 - 23467225
Alignment:
Q  32 ggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctctagaaattaaaaggttataacttgagaaaggat 131  Q
    ||||||||||| ||||||| |||||||||| ||| | ||   |||| ||||||||||||||||| |  ||| ||||||||||||||||||  |||||| |    
T  23467349 ggaaattgagggttatgacatatgaattaaggttctgacatcgctttcgcggttattcaatcggtttaagagattaaaaggttataacttaggaaagggt 23467250  T
Q  132 tttgagtcaagagattgatcaaaac 156  Q
    |||||||||||||||||||||||||    
T  23467249 tttgagtcaagagattgatcaaaac 23467225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 32 - 162
Target Start/End: Original strand, 16546940 - 16547070
Alignment:
Q  32 ggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctctagaaattaaaaggttataacttgagaaaggat 131  Q
    ||||||||||  |||||||||||||||||| ||| | ||   |||||| ||||||||||||| | |  ||| ||||||||||||||||||  |||||| |    
T  16546940 ggaaattgagagttatgacttatgaattaacgttctgacatagcttccacggttattcaatcagtttaagagattaaaaggttataacttaggaaagggt 16547039  T
Q  132 tttgagtcaagagattgatcaaaaccactta 162  Q
    ||||||||||||||||||||||||| |||||    
T  16547040 tttgagtcaagagattgatcaaaactactta 16547070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 32 - 162
Target Start/End: Complemental strand, 16618722 - 16618592
Alignment:
Q  32 ggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctctagaaattaaaaggttataacttgagaaaggat 131  Q
    ||||||||||  |||||||||||||||||| ||| | ||   |||||| ||||||||||||| | |  ||| ||||||||||||||||||  |||||| |    
T  16618722 ggaaattgagagttatgacttatgaattaacgttctgacatagcttccacggttattcaatcagtttaagagattaaaaggttataacttaggaaagggt 16618623  T
Q  132 tttgagtcaagagattgatcaaaaccactta 162  Q
    ||||||||||||||||||||||||| |||||    
T  16618622 tttgagtcaagagattgatcaaaactactta 16618592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 21 - 162
Target Start/End: Complemental strand, 748233 - 748092
Alignment:
Q  21 acctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctctagaaattaaaaggttataact 120  Q
    |||||||||| ||||||||||||||||||   ||||||||| ||| |      |||||||||||||||||||||| |  ||| |||||||||||||||||    
T  748233 acctagagataggaaattgaggattatgatacatgaattaacgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaaggttataact 748134  T
Q  121 tgagaaaggattttgagtcaagagattgatcaaaaccactta 162  Q
    |  |||||| |||||||||| ||||||||||||||| |||||    
T  748133 taggaaagggttttgagtcaggagattgatcaaaactactta 748092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 23598974 - 23598818
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||| ||||||||| |||||||||||||| |||| ||||| || ||||| |||||||||| ||| |      |||||||| ||||||||||||| |  |    
T  23598974 tgtttgattcaacat-aggaacctagagataggaatttgagaatcatgacatatgaattaacgttcttttatcgcttccgcagttattcaatcggtttaa 23598876  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaacca 158  Q
    || ||||||||||||||||||  |||||| |||||| |||||||||||||||||||||    
T  23598875 gagattaaaaggttataacttaggaaagggttttgattcaagagattgatcaaaacca 23598818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 11825566 - 11825414
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||| ||||||||| || ||||||||||| |||||||||| || |||||  ||||||||| ||| |      |||||||||||||||||||||| |  |    
T  11825566 tgtttgattcaacat-agaaacctagagataggaaattgagaatcatgacccatgaattaacgttcttttatcgcttccgcggttattcaatcggtttaa 11825468  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaa 154  Q
     | ||||||||||||||||||  |||||| ||||||||||||||||||||||||    
T  11825467 aagattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaa 11825414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 26182209 - 26182363
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||| ||||||||| |||||||||||||| |||||||||| || ||||| |||||||||| ||| |      ||||| || ||||||||||| | |  |    
T  26182209 tgtttgattcaacat-aggaacctagagataggaaattgagaatcatgacatatgaattaacgttcttttatcgcttctgcagttattcaatcagtttaa 26182307  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaac 156  Q
    || ||||||||||||||||||  |||||| |||||| |||||||||||||||||||    
T  26182308 gagattaaaaggttataacttaggaaagggttttgactcaagagattgatcaaaac 26182363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 83 - 154
Target Start/End: Complemental strand, 6214505 - 6214434
Alignment:
Q  83 gttattcaatcggctctagaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaa 154  Q
    ||||||||||||| |  ||| |||||||||||||||| |  ||||||| |||||||||||||||||||||||    
T  6214505 gttattcaatcggtttaagagattaaaaggttataacctaggaaaggactttgagtcaagagattgatcaaa 6214434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 104 - 162
Target Start/End: Original strand, 42606293 - 42606350
Alignment:
Q  104 attaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaaccactta 162  Q
    |||||||||| |||| || ||||||| |||||||||||||||||||||||||| |||||    
T  42606293 attaaaaggt-ataatttaagaaagggttttgagtcaagagattgatcaaaactactta 42606350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 26808839 - 26808787
Alignment:
Q  104 attaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaac 156  Q
    ||||| |||||||||| |   ||||||||||||||||| ||||||||||||||    
T  26808839 attaagaggttataacctagaaaaggattttgagtcaaaagattgatcaaaac 26808787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 114; Significance: 6e-58; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 33321135 - 33320975
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| |  |    
T  33321135 tgtttaattcaacat-aggaacctagagataggaaattgaggattatgacttatgaattaacgttctcaccatgcttccgcggttattcaatcggtttaa 33321037  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaaccactta 162  Q
    || ||||||||||||||||||  |||||| ||||||||||||||||||||||||||||||||    
T  33321036 gagattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaaaccactta 33320975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 2500219 - 2500059
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||||||||||||| |||||||||| ||| |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| | |  |    
T  2500219 tgtttaattcaacat-aggaacctagtgataggaaattgaggattatgacttatgaattaacgttctcaccatgcttccgcggttattcaatcagtttaa 2500121  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaaccactta 162  Q
    |||||||||||||||||||||  |||||| ||||||||||||||||||||||||||||||||    
T  2500120 gaaattaaaaggttataacttatgaaagggttttgagtcaagagattgatcaaaaccactta 2500059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 19686077 - 19686231
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||||| ||| | ||   |||||||||||||||||||||| |  |    
T  19686077 tgtttaattcaacat-aggaacctagagataggaaattgaggattatgacatatgaattaacgttctgacatcgcttccgcggttattcaatcggtttaa 19686175  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaac 156  Q
    || ||||||||||||||||||  |||||| ||||||||||||||||||||||||||    
T  19686176 gagattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaaac 19686231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 17944558 - 17944710
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||||||||||||| |||||||||||||| ||||||||||| ||||||| |||||||||| ||| | ||   |||||||||||||||||||||| |  |    
T  17944558 tgtttaattcaacat-aggaacctagagataggaaattgagggttatgacatatgaattaacgttctgacatcgcttccgcggttattcaatcggtttaa 17944656  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaa 154  Q
    || ||||||||||||||||||  |||||| ||||||||||||||||||||||||    
T  17944657 gagattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaa 17944710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 26337890 - 26338050
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||||||||||||| || ||||||||||| ||||||||||  |||||||||||||||||| ||| | ||    ||||| |||||||||||||||||  |    
T  26337890 tgtttaattcaacataag-aacctagagataggaaattgagagttatgacttatgaattaacgttctgacataacttccacggttattcaatcggcttaa 26337988  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaaccactta 162  Q
    || ||||||||||||||||||  |||||| ||||||||||||||||||||||||||||||||    
T  26337989 gagattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaaaccactta 26338050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 34652966 - 34652806
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||||||||||||| |||||||||||||| ||||||||||| ||||||| |||||||||| ||| | ||   |||||||||||||||||||||| |  |    
T  34652966 tgtttaattcaacat-aggaacctagagataggaaattgagggttatgacatatgaattaacgttctgacatcgcttccgcggttattcaatcggtttaa 34652868  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaaccactta 162  Q
    || ||||||| ||||||||||  |||||| |||||||||||||||||||||||||| |||||    
T  34652867 gagattaaaatgttataacttaggaaagggttttgagtcaagagattgatcaaaactactta 34652806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 9690670 - 9690830
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||||||||||||| ||||||||||||||| |||||||||  |||| |||| |||||||| ||| | ||   |||||| ||||||||||||||| |  |    
T  9690670 tgtttaattcaacat-aggaacctagagatgtgaaattgagagttataacttgtgaattaacgttctgacatagcttccacggttattcaatcggtttaa 9690768  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaaccactta 162  Q
    || ||||||||||||||||||  |||||| ||||||||||||||||||||||||||||||||    
T  9690769 gagattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaaaccactta 9690830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 19689460 - 19689614
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||||| ||| | ||   ||||||  |||||||||||||| |  |    
T  19689460 tgtttaattcaacat-aggaacctagagataggaaattgaggattatgacatatgaattaacgttctgacatcgcttccatggttattcaatcggtttaa 19689558  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaac 156  Q
    || ||||||||||||||||||   ||||| ||||||||||||||||||||||||||    
T  19689559 gagattaaaaggttataacttagtaaagggttttgagtcaagagattgatcaaaac 19689614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 26548001 - 26548161
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||| ||||||||| |||||||||||||| ||||||||||||| |||||| ||||||||| ||| |      ||||||  |||||||||||||| |  |    
T  26548001 tgtttgattcaacat-aggaacctagagataggaaattgaggatcatgactcatgaattaacgttcttttatcgcttccatggttattcaatcggtttaa 26548099  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaaccactta 162  Q
    || |||||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||    
T  26548100 gagattaaaaggttataacttaagaaagggttttgagtcaagagattgatcaaaactactta 26548161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 26551560 - 26551720
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||| ||||||||| |||||||||||||| ||||||||||||| |||||| ||||||||| ||| |      ||||||  |||||||||||||| |  |    
T  26551560 tgtttgattcaacat-aggaacctagagataggaaattgaggatcatgactcatgaattaacgttcttttatcgcttccatggttattcaatcggtttaa 26551658  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaaccactta 162  Q
    || |||||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||    
T  26551659 gagattaaaaggttataacttaagaaagggttttgagtcaagagattgatcaaaactactta 26551720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 28562570 - 28562410
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||| ||||||||| |||||||||||||| ||||||||||||| |||||| ||||||||| ||| |      ||||||| |||||||||||||| |  |    
T  28562570 tgtttgattcaacat-aggaacctagagataggaaattgaggatcatgactcatgaattaacgttcttttatcgcttccgtggttattcaatcggtttaa 28562472  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaaccactta 162  Q
    || ||||||||||||||||||  |||||| |||||||||||||||||||||||||| |||||    
T  28562471 gagattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaaactactta 28562410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 28566138 - 28565978
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||| ||||||||| |||||||||||||| ||||||||||||| |||||| ||||||||| ||| |      ||||||| |||||||||||||| |  |    
T  28566138 tgtttgattcaacat-aggaacctagagataggaaattgaggatcatgactcatgaattaacgttcttttatcgcttccgtggttattcaatcggtttaa 28566040  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaaccactta 162  Q
    || ||||||||||||||||||  |||||| |||||||||||||||||||||||||| |||||    
T  28566039 gagattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaaactactta 28565978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 4732042 - 4731882
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgt--tttcaccatgcttccgcggttattcaatcggctc 98  Q
    ||||| ||||||||| |||||||||||||| |||||||||||||||||||  | ||| ||| ||  ||| | |  |||||||||||||||||||||| |     
T  4732042 tgtttgattcaacat-aggaacctagagataggaaattgaggattatgacacaagaactaacgtacttttatc--gcttccgcggttattcaatcggttt 4731946  T
Q  99 tagaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaaccactta 162  Q
     ||| ||||||||||||||||||  |||||  |||||||||||||||||||||||||| |||||    
T  4731945 aagagattaaaaggttataacttaggaaagagttttgagtcaagagattgatcaaaactactta 4731882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 16 - 156
Target Start/End: Original strand, 2453204 - 2453344
Alignment:
Q  16 taggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctctagaaattaaaaggtta 115  Q
    ||||||||||||||| ||||||||||| |||||||  ||| |||||| || | ||   |||||| ||||||||||||||| |  ||| ||||||| ||||    
T  2453204 taggaacctagagataggaaattgagggttatgacacatggattaattttctgacatcgcttccacggttattcaatcggtttaagagattaaaaagtta 2453303  T
Q  116 taacttgagaaaggattttgagtcaagagattgatcaaaac 156  Q
    ||||||  |||||| ||||||||||||||||||||||||||    
T  2453304 taacttaggaaagggttttgagtcaagagattgatcaaaac 2453344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 40800127 - 40799967
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccat-gcttccgcggttattcaatcggctct 99  Q
    ||||| ||||||||| ||||||||||| || | ||||||||||| |||||| ||||||||| ||| |  | || |||||||||||||||||||||| |      
T  40800127 tgtttgattcaacat-aggaacctagaaatagaaaattgaggatcatgactcatgaattaacgttctt-ctatcgcttccgcggttattcaatcggttta 40800030  T
Q  100 agaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaaccactta 162  Q
    ||| ||||||| ||||||||||  |||||| |||||||| ||||||||||||||||| |||||    
T  40800029 agagattaaaaagttataacttaggaaagggttttgagttaagagattgatcaaaactactta 40799967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 74 - 162
Target Start/End: Original strand, 3195073 - 3195161
Alignment:
Q  74 gcttccgcggttattcaatcggctctagaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaaccactta 162  Q
    |||||||||||||||||||||| |  ||| ||||||||||||||||||  |||||| |||||||||||||||||||||||||| |||||    
T  3195073 gcttccgcggttattcaatcggtttaagagattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaaactactta 3195161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 1810619 - 1810528
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatc 93  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||||| |||||      ||||||||||||||||||||    
T  1810619 tgtttaattcaacat-aggaacctagagataggaaattgaggattatgacatatgaattaacgttttgttatcgcttccgcggttattcaatc 1810528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 33921049 - 33921142
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcgg 95  Q
    ||||||||||||||| |||||||||||||| ||||||||||  |||||||||||||||||| ||| | ||   |||||| |||||||||||||||    
T  33921049 tgtttaattcaacat-aggaacctagagataggaaattgagagttatgacttatgaattaacgttctgacatagcttccacggttattcaatcgg 33921142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 26726853 - 26727009
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||| ||||||||| |||||||||||||| |||||||||| || ||||| |||||||||| ||| |      ||||||||  |||||||||||| |  |    
T  26726853 tgtttgattcaacat-aggaacctagagataggaaattgagaatcatgacatatgaattaacgttcttttatcgcttccgcaattattcaatcggtttaa 26726951  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaacca 158  Q
    || ||||||||||||||||||  || ||  |||||| ||||||||||||| |||||||    
T  26726952 gagattaaaaggttataacttaggacagagttttgattcaagagattgattaaaacca 26727009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 84 - 156
Target Start/End: Complemental strand, 35432619 - 35432547
Alignment:
Q  84 ttattcaatcggctctagaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaac 156  Q
    |||||||||||  |  ||| ||||| |||||||||| |  |||||||||||||||||||||||||||||||||    
T  35432619 ttattcaatcgatttaagagattaagaggttataaccttggaaaggattttgagtcaagagattgatcaaaac 35432547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 25185294 - 25185432
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||||||||| ||| |||||||||||||| ||||| ||||| ||||||  |||||||||| ||| |      ||||||||| ||||||| |||  |  |    
T  25185294 tgtttaattcatcat-aggaacctagagataggaaaatgaggcttatgatatatgaattaacgttctgttgtcgcttccgcgattattcattcgatttaa 25185392  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtca 140  Q
    || ||||||||||||||||||  |||||| ||||||||||    
T  25185393 gagattaaaaggttataacttaggaaagggttttgagtca 25185432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 156
Target Start/End: Complemental strand, 1810521 - 1810489
Alignment:
Q  124 gaaaggattttgagtcaagagattgatcaaaac 156  Q
    |||||| ||||||||||||||||||||||||||    
T  1810521 gaaagggttttgagtcaagagattgatcaaaac 1810489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 36335219 - 36335167
Alignment:
Q  104 attaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaac 156  Q
    ||||| || |||||||||  |||||| ||||||||||||||||| ||||||||    
T  36335219 attaagagattataacttaggaaagggttttgagtcaagagatttatcaaaac 36335167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 110; Significance: 1e-55; HSPs: 19)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 13979041 - 13979201
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||| |||||||||||||||| |  |    
T  13979041 tgtttaattcaacat-aggaacctagagataggaaattgaggattatgacttatgaattaacgttctcaccatgcttctgcggttattcaatcggtttaa 13979139  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaaccactta 162  Q
    || ||||||||||||||||||  |||||| ||||||||||||||||||||||||||||||||    
T  13979140 gagattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaaaccactta 13979201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 15851080 - 15851240
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||||||||||||| |||||||||| ||| |||||||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||| | |  |    
T  15851080 tgtttaattcaacat-aggaacctagtgataggaaattgaggattatgacttatgaattaacgttctcaccatgcttccgcgattattcaatctgtttaa 15851178  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaaccactta 162  Q
    || ||||||||||||||||||  |||||| ||||||||||| ||||||||||||||||||||    
T  15851179 gagattaaaaggttataacttaggaaagggttttgagtcaaaagattgatcaaaaccactta 15851240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 26703702 - 26703542
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||||||||||||| ||||||||||||||  |||||||||  |||||||||||| ||||| ||| ||||||||||||||| ||||||||||||| |  |    
T  26703702 tgtttaattcaacat-aggaacctagagataagaaattgagagttatgacttatggattaacgttctcaccatgcttccgcagttattcaatcggtttaa 26703604  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaaccactta 162  Q
    || ||||||||||||||||||  |||||  ||||||||||||||||||||||||||||||||    
T  26703603 gagattaaaaggttataacttaggaaagagttttgagtcaagagattgatcaaaaccactta 26703542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 16 - 162
Target Start/End: Original strand, 19928808 - 19928947
Alignment:
Q  16 taggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctctagaaattaaaaggtta 115  Q
    ||||||||||||||| ||||||||||||||||       ||||||| ||| ||||||||||||||||||||||||||||| |  ||| ||||||||||||    
T  19928808 taggaacctagagataggaaattgaggattat-------gaattaacgttctcaccatgcttccgcggttattcaatcggtttaagatattaaaaggtta 19928900  T
Q  116 taacttgagaaaggattttgagtcaagagattgatcaaaaccactta 162  Q
    ||||||  |||||| ||||||||||||||||||||||||||||||||    
T  19928901 taacttaggaaagggttttgagtcaagagattgatcaaaaccactta 19928947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 11702798 - 11702644
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||||||||||||| |||||||||||||| ||||||||||| ||||||| ||||||||||  || | ||   |||||||||||||||||||| | |  |    
T  11702798 tgtttaattcaacat-aggaacctagagataggaaattgagggttatgacatatgaattaacattctgacatcgcttccgcggttattcaatcagtttaa 11702700  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaac 156  Q
    || ||||||||||| ||||||  |||||| ||||||||||||||||||||||||||    
T  11702699 gagattaaaaggttttaacttaggaaagggttttgagtcaagagattgatcaaaac 11702644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 14701813 - 14701969
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||| ||||||||| |||||||||||||| |||||||||| || ||||| |||||||||| ||  | ||   |||||||||||||||||||||| |  |    
T  14701813 tgtttgattcaacat-aggaacctagagataggaaattgagaatcatgacatatgaattaacgtcctaacatcgcttccgcggttattcaatcggtttaa 14701911  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaacca 158  Q
    || ||||||||||||||||||  |||||| |||||| |||||||||||||||||||||    
T  14701912 gagattaaaaggttataacttaggaaagggttttgattcaagagattgatcaaaacca 14701969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 18859686 - 18859846
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||| ||||||||| |||||||||||||| | ||||||||||| |||||| ||||||||| | | |      |||||||||||||||||||||| |  |    
T  18859686 tgtttgattcaacat-aggaacctagagatagaaaattgaggatcatgactcatgaattaacgatcttttatcgcttccgcggttattcaatcggtttaa 18859784  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaaccactta 162  Q
    || ||||||||||||||||||  |||||| |||||||||||||||||||||||||| |||||    
T  18859785 gagattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaaactactta 18859846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 49636734 - 49636579
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgtt-ttcaccatgcttccgcggttattcaatcggctct 99  Q
    ||||| ||||||||| |||||||||||||| |||||||||| || ||||| |||||||||| ||| || | |  |||||||| ||||||||||||| |      
T  49636734 tgtttgattcaacat-aggaacctagagataggaaattgagaatcatgacatatgaattaacgttatttatc--gcttccgcagttattcaatcggttta 49636638  T
Q  100 agaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaacca 158  Q
    ||| ||||||||||||||||||  |||||| |||||| |||||||||||||||||||||    
T  49636637 agagattaaaaggttataacttaggaaagggttttgattcaagagattgatcaaaacca 49636579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 3719707 - 3719551
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||| ||||||||| |||||||||||||| |||||||||| || ||||| |||||||||| ||| |      |||||||| ||||||||||||| |  |    
T  3719707 tgtttgattcaacat-aggaacctagagataggaaattgagaatcatgacatatgaattaacgttcttttatcgcttccgcagttattcaatcggtttaa 3719609  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaacca 158  Q
    || ||||||||||||||||||  |||||| |||||| | |||||||||||||||||||    
T  3719608 gagattaaaaggttataacttaggaaagggttttgattgaagagattgatcaaaacca 3719551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 3734221 - 3734376
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgtt-ttcaccatgcttccgcggttattcaatcggctct 99  Q
    ||||| ||||||||| |||||||||||||| |||||||||| || ||||| |||||||||| ||| || | |  ||||||||  |||||||||| | |      
T  3734221 tgtttgattcaacat-aggaacctagagataggaaattgagaatcatgacatatgaattaacgttatttatc--gcttccgcaattattcaatcagttta 3734317  T
Q  100 agaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaacca 158  Q
    ||| ||||||||||||||||||  |||||| |||||| |||||||||||||||||||||    
T  3734318 agagattaaaaggttataacttaggaaagggttttgattcaagagattgatcaaaacca 3734376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 49640027 - 49639872
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgtt-ttcaccatgcttccgcggttattcaatcggctct 99  Q
    ||||| ||||||||| |||||||||||||| |||||||||| || ||||| |||||||||| ||| || | |  ||||||||  |||||||||| | |      
T  49640027 tgtttgattcaacat-aggaacctagagataggaaattgagaatcatgacatatgaattaacgttatttatc--gcttccgcaattattcaatcagttta 49639931  T
Q  100 agaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaacca 158  Q
    ||| ||||||||||||||||||  |||||| |||||| |||||||||||||||||||||    
T  49639930 agagattaaaaggttataacttaggaaagggttttgattcaagagattgatcaaaacca 49639872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 10247728 - 10247877
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||| ||     ||| ||| | ||   |||||||||||||||||| | | |  |    
T  10247728 tgtttaattcaacat-aggaacctagagataggaaattgaggattatgacata-----taacgttctaacatcgcttccgcggttattcaaccagtttaa 10247821  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaac 156  Q
     | ||||||||||||||||||  |||| | ||||||||||||||||||||||||||    
T  10247822 aagattaaaaggttataacttaggaaatggttttgagtcaagagattgatcaaaac 10247877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 33400537 - 33400392
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||||||||||||| |||||||||| ||| ||||||||| | |||||||  |||||||||  || | ||   ||||||||| |||||||||||| |  |    
T  33400537 tgtttaattcaacat-aggaacctagggataggaaattgatggttatgac--atgaattaacattctgacatcgcttccgcgattattcaatcggttgaa 33400441  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattga 149  Q
    || ||||||||||||||||||  |||||  |||||||||||||||||||    
T  33400440 gagattaaaaggttataacttaggaaagagttttgagtcaagagattga 33400392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 156
Target Start/End: Original strand, 10385854 - 10385995
Alignment:
Q  3 tttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctctaga 102  Q
    ||||||||||||| |||||||||||||| ||||||||    ||||||| |||||||||| ||| | ||   ||||| |||||||||||||||| |  |||    
T  10385854 tttaattcaacat-aggaacctagagataggaaattg----ttatgacatatgaattaacgttctgacatcgcttctgcggttattcaatcggtttaaga 10385948  T
Q  103 aattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaac 156  Q
     |||||||||||||       |||||| ||||||||||||||||||||||||||    
T  10385949 gattaaaaggttat-------gaaagggttttgagtcaagagattgatcaaaac 10385995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 56089525 - 56089466
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaa 61  Q
    ||||||||||||||| |||||||||||||| ||||||||||  ||||||||||||||||||    
T  56089525 tgtttaattcaacat-aggaacctagagataggaaattgagagttatgacttatgaattaa 56089466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 104 - 162
Target Start/End: Original strand, 17670322 - 17670380
Alignment:
Q  104 attaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaaccactta 162  Q
    |||||||| |||||||||  |||||| |||||||||||||||||||||||||| |||||    
T  17670322 attaaaagattataacttaggaaagggttttgagtcaagagattgatcaaaactactta 17670380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 74 - 156
Target Start/End: Original strand, 23653254 - 23653336
Alignment:
Q  74 gcttccgcggttattcaatcggctctagaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaac 156  Q
    |||||| ||||||||||||||| |  ||| ||||||| ||||||||||  |||||| ||||||||||| | ||||||||||||    
T  23653254 gcttccacggttattcaatcggtttaagagattaaaatgttataacttaggaaagggttttgagtcaaaaaattgatcaaaac 23653336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 154
Target Start/End: Original strand, 11560799 - 11560873
Alignment:
Q  80 gcggttattcaatcggctctagaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaa 154  Q
    |||||| ||||||||| |  ||| ||||| ||||||||||||  |||||  ||||||||||| ||||||||||||    
T  11560799 gcggttgttcaatcggtttaagagattaataggttataacttaggaaagagttttgagtcaaaagattgatcaaa 11560873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 153
Target Start/End: Complemental strand, 24605377 - 24605307
Alignment:
Q  83 gttattcaatcggctctagaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaa 153  Q
    ||||||||||||| |  ||| |||||||||||||||| |  ||||||  ||||| ||||||||||||||||    
T  24605377 gttattcaatcggtttaagagattaaaaggttataacctaggaaagggctttgattcaagagattgatcaa 24605307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 106; Significance: 4e-53; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 19967 - 19807
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||||||| ||| ||||||| ||||||||||||||||||||| |  |    
T  19967 tgtttaattcaacat-aggaacctagagataggaaattggggattatgacttatgaattaacgttctcaccattcttccgcggttattcaatcggtttaa 19869  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaaccactta 162  Q
    || ||||||||||||||||||  |||||| ||||||||||||||||||||||||||||||||    
T  19868 gagattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaaaccactta 19807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 106; Significance: 4e-53; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 13331996 - 13332156
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||||||||| ||| |||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| |  |    
T  13331996 tgtttaattcatcat-aggaacctagagataggaaattgaggattatgacttatgaattaacgttctcaccatgcttccgcggttattcaatcggtttaa 13332094  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaaccactta 162  Q
    || ||||||| ||||||||||  |||||| ||||||||||||||||||||||||||||||||    
T  13332095 gagattaaaatgttataacttaggaaagggttttgagtcaagagattgatcaaaaccactta 13332156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 39660168 - 39660010
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||||||||||||| ||||||||| | || |||||||||||||||||||||||||| ||| ||| || ||||||||| |||||||||||||||| |  |    
T  39660168 tgtttaattcaacat-aggaacctacaaataggaaattgaggattatgacttatgaagtaacgttctcgccatgcttctgcggttattcaatcggtttaa 39660070  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaaccact 160  Q
    || ||||||||||||||||||  |||||| ||||||||||||||||||||||||||||||    
T  39660069 gagattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaaaccact 39660010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 20262463 - 20262617
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||| ||||||||| |||||||||||||| |||||||||| || ||||| |||||||||| ||| | ||   |||||||||||||||||||||| |  |    
T  20262463 tgtttgattcaacat-aggaacctagagataggaaattgagaatcatgacatatgaattaacgttctgacatcgcttccgcggttattcaatcggattaa 20262561  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaac 156  Q
    || |||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  20262562 gagattaaaaggttataacttaagaaagggttttgagtcaagagattgatcaaaac 20262617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 21049093 - 21049247
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||| ||||||||| |||||||||||||| |||||||||| || ||||| |||||||||| ||| | ||   |||||||||||||||||||||| |  |    
T  21049093 tgtttgattcaacat-aggaacctagagataggaaattgagaatcatgacatatgaattaacgttctgacatcgcttccgcggttattcaatcggattaa 21049191  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaac 156  Q
    || |||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  21049192 gagattaaaaggttataacttaagaaagggttttgagtcaagagattgatcaaaac 21049247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 5827934 - 5828094
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||||||||||||| |||||||| ||||| ||||||||||  |||||||||||||||||| ||| | ||   | |||  ||||||||||||||| |  |    
T  5827934 tgtttaattcaacat-aggaacctcgagataggaaattgagagttatgacttatgaattaacgttctgacatagtttctacggttattcaatcggtttaa 5828032  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaaccactta 162  Q
    || ||||||||||||||||||  |||||| ||||||||||||||||||||||||||||||||    
T  5828033 gagattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaaaccactta 5828094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 30645381 - 30645535
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||||||||||||| || ||||||||||| ||||||||||||||||||| |||||||||| ||| | ||   |||||| ||||||||||||||| |  |    
T  30645381 tgtttaattcaacataag-aacctagagataggaaattgaggattatgacatatgaattaacgttctgacatcgcttccacggttattcaatcggtttaa 30645479  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaac 156  Q
     | |||||||||||| |||||  |||||| ||||||||||||||||||||||||||    
T  30645480 aagattaaaaggttagaacttaggaaagggttttgagtcaagagattgatcaaaac 30645535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 16 - 162
Target Start/End: Complemental strand, 18696172 - 18696026
Alignment:
Q  16 taggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctctagaaattaaaaggtta 115  Q
    ||||||||||||||| |||||||||| || ||||| |||||||||||||| | ||    ||||||| ||||||||||||| |  ||| ||||||||||||    
T  18696172 taggaacctagagataggaaattgagaatcatgacatatgaattaatgttctgacatctcttccgcagttattcaatcggtttaagagattaaaaggtta 18696073  T
Q  116 taacttgagaaaggattttgagtcaagagattgatcaaaaccactta 162  Q
    ||||||  |||||| ||| |||||||||||||||||||||| |||||    
T  18696072 taacttaggaaagggtttcgagtcaagagattgatcaaaactactta 18696026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 14187909 - 14188069
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||| ||||||||| |||||||||||||| ||||||||||||| |||||  ||||||||| ||  |      |||||||||||||||||||||| |  |    
T  14187909 tgtttgattcaacat-aggaacctagagataggaaattgaggatcatgacacatgaattaacgtacttttatggcttccgcggttattcaatcggtttaa 14188007  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaaccactta 162  Q
    || ||||||||||||||||||  |||||| |||||||||||||||||||||||||| |||||    
T  14188008 gagattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaaactactta 14188069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 17013243 - 17013087
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||| ||||||||| |||||||||||||| |||||||||| || ||||| |||||||||||||| |      |||||||| ||||||||||||| |  |    
T  17013243 tgtttgattcaacat-aggaacctagagataggaaattgagaatcatgacatatgaattaatgttcttttatcgcttccgcagttattcaatcggtttaa 17013145  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaacca 158  Q
    || ||||||||||||||||||  |||||| |||||| |||||||||||||||||||||    
T  17013144 gagattaaaaggttataacttaggaaagggttttgattcaagagattgatcaaaacca 17013087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 22654170 - 22654330
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgt--tttcaccatgcttccgcggttattcaatcggctc 98  Q
    ||||| ||||||||| |||||||||||||| |||||||||||||| ||||  ||||||||| ||  ||| | |  |||||||||||||||||||||| |     
T  22654170 tgtttgattcaacat-aggaacctagagataggaaattgaggattttgacacatgaattaacgtacttttatc--gcttccgcggttattcaatcggttt 22654266  T
Q  99 tagaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaaccactta 162  Q
     ||| ||||||||||||||| ||  |||||| |||||||||||||||||||||||||| |||||    
T  22654267 aagagattaaaaggttataatttaggaaagggttttgagtcaagagattgatcaaaactactta 22654330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 5964164 - 5964316
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||| ||||||||| |||||||||||||| | ||||||||||| |||||| ||||||||| ||| |      |||||||||||||||||||||| |  |    
T  5964164 tgtttgattcaacat-aggaacctagagatagaaaattgaggatcatgactcatgaattaacgttcttttatcgcttccgcggttattcaatcggtttaa 5964262  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaa 154  Q
    || ||||||||||||||||||  |||| | ||||||||||||||||||||||||    
T  5964263 gagattaaaaggttataacttaggaaatggttttgagtcaagagattgatcaaa 5964316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 17543958 - 17544114
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||| ||||||||| |||||||||||||| |||||||||| || ||||| |||||||||||||| |      |||||||| ||||||||||||| |  |    
T  17543958 tgtttgattcaacat-aggaacctagagataggaaattgagaatcatgacatatgaattaatgttcttttatcgcttccgcagttattcaatcggtttaa 17544056  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaacca 158  Q
    || ||||||||||||||||||  |||||| |||||| |||||| ||||||||||||||    
T  17544057 gagattaaaaggttataacttaggaaagggttttgattcaagatattgatcaaaacca 17544114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 24903695 - 24903539
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||| ||||||||| ||||| |||||||| |||||||||| || ||||| ||||||||||  |  | ||   ||||||||| |||||||||||| |  |    
T  24903695 tgtttgattcaacat-aggaagctagagataggaaattgagaatcatgacatatgaattaacatcctaacatcgcttccgcgattattcaatcggtttaa 24903597  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaacca 158  Q
    || ||||||||||||||||||  |||||| |||||| |||||||||||||||||||||    
T  24903596 gagattaaaaggttataacttaggaaagggttttgattcaagagattgatcaaaacca 24903539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 31981256 - 31981410
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||||||||||||| |||||||||||||| ||||||||||| || |||| |||||||||| ||| | ||   |||| || |||||||||||||| |  |    
T  31981256 tgtttaattcaacat-aggaacctagagataggaaattgagggttgtgacatatgaattaacgttctgacatcgctttcgtggttattcaatcggtttaa 31981354  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaac 156  Q
    || |||||||| | || ||||  |||||| |||||| |||||||||||||||||||    
T  31981355 gagattaaaagatcattacttatgaaagggttttgaatcaagagattgatcaaaac 31981410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 9467035 - 9467107
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatg 74  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||    
T  9467035 tgtttaattcaacat-aggaacctagagataggaaattgaggattatgacttatggattaatgttctcaccatg 9467107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 161
Target Start/End: Original strand, 24434953 - 24435098
Alignment:
Q  16 taggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctctagaaattaaaaggtta 115  Q
    ||||||||||||||| |||||||||| || ||||| || ||||||| ||| |      |||||||| ||||||||||||| |  ||| ||||||||||||    
T  24434953 taggaacctagagataggaaattgagaatcatgacataggaattaacgttcttttatcgcttccgcagttattcaatcggtttaagagattaaaaggtta 24435052  T
Q  116 taacttgagaaaggattttgagtcaagagattgatcaaaaccactt 161  Q
    |||| |  |||| | |||||| |||||||||||| |||| ||||||    
T  24435053 taacctaggaaaaggttttgattcaagagattgaccaaatccactt 24435098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 161
Target Start/End: Original strand, 24444999 - 24445144
Alignment:
Q  16 taggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctctagaaattaaaaggtta 115  Q
    ||||||||||||||| |||||||||| || ||||| || ||||||| ||| |      |||||||| ||||||||||||| |  ||| ||||||||||||    
T  24444999 taggaacctagagataggaaattgagaatcatgacataggaattaacgttcttttatcgcttccgcagttattcaatcggtttaagagattaaaaggtta 24445098  T
Q  116 taacttgagaaaggattttgagtcaagagattgatcaaaaccactt 161  Q
    |||| |  |||| | |||||| |||||||||||| |||| ||||||    
T  24445099 taacctaggaaaaggttttgattcaagagattgaccaaatccactt 24445144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 75 - 156
Target Start/End: Complemental strand, 27863692 - 27863611
Alignment:
Q  75 cttccgcggttattcaatcggctctagaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaac 156  Q
    ||||| || |||||||||||| |  ||| ||||||| ||||||||||  |||||| ||||||||||||||||||||||||||    
T  27863692 cttccacgattattcaatcggtttaagagattaaaatgttataacttaggaaagggttttgagtcaagagattgatcaaaac 27863611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 31984897 - 31984990
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcgg 95  Q
    ||||||||||||||| |||||||||||||| ||||||||||| || |||| |||||||||| ||| | ||   |||| |||||||| ||||||||    
T  31984897 tgtttaattcaacat-aggaacctagagataggaaattgagggttgtgacatatgaattaacgttctgacatcgctttcgcggttactcaatcgg 31984990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 154
Target Start/End: Original strand, 587302 - 587373
Alignment:
Q  83 gttattcaatcggctctagaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaa 154  Q
    ||||||||||||  |  ||| |||||||||||||||| |  ||||||  |||||||||||||||||||||||    
T  587302 gttattcaatcgatttaagagattaaaaggttataacctaggaaagggctttgagtcaagagattgatcaaa 587373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 154
Target Start/End: Complemental strand, 626620 - 626549
Alignment:
Q  83 gttattcaatcggctctagaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaa 154  Q
    ||||||||||||  |  ||| |||||||||||||||| |  ||||||  |||||||||||||||||||||||    
T  626620 gttattcaatcgatttaagagattaaaaggttataacctaggaaagggctttgagtcaagagattgatcaaa 626549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 156
Target Start/End: Original strand, 31986288 - 31986337
Alignment:
Q  107 aaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaac 156  Q
    ||||| |||| ||||  |||||| ||||||||||||||||||||||||||    
T  31986288 aaaagattattacttaggaaagggttttgagtcaagagattgatcaaaac 31986337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 106; Significance: 4e-53; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 28327351 - 28327511
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||| |  |    
T  28327351 tgtttaattcaacat-aggaacctagagataggaaattgaggattatgacttatgaattaacgttctcaccatgcttccgcgattattcaatcggtttaa 28327449  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaaccactta 162  Q
    || ||||||||||||||||||  |||||| ||||| ||||||||||||||||||||||||||    
T  28327450 gagattaaaaggttataacttaggaaagggttttgtgtcaagagattgatcaaaaccactta 28327511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 28330676 - 28330836
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||| |  |    
T  28330676 tgtttaattcaacat-aggaacctagagataggaaattgaggattatgacttatgaattaacgttctcaccatgcttccgcgattattcaatcggtttaa 28330774  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaaccactta 162  Q
    || ||||||||||||||||||  |||||| ||||| ||||||||||||||||||||||||||    
T  28330775 gagattaaaaggttataacttaggaaagggttttgtgtcaagagattgatcaaaaccactta 28330836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 27054778 - 27054939
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    |||||||||||| || |||||||||||||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |  |    
T  27054778 tgtttaattcaatat-aggaacctagagataggaaattgatgattatgacttatgaattaacgttttcaccatgcttccgcggttattcaatcggtttaa 27054876  T
Q  101 gaaattaaaaggttataacttgagaaa-ggattttgagtcaagagattgatcaaaaccactta 162  Q
    || ||||||||||||||||||  |||| || ||||||||||||||||||||||||||||||||    
T  27054877 gagattaaaaggttataacttaggaaagggtttttgagtcaagagattgatcaaaaccactta 27054939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 3305757 - 3305917
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| ||| | |||||||||||||| |||||||||||  |  |    
T  3305757 tgtttaattcaacat-aggaacctagagataggaaattgaggattatgacttatgaattaacgttcttaccatgcttccgcgattattcaatcgatttaa 3305855  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaaccactta 162  Q
    || |||||||||||||||||   |||||| ||||| ||||||||||||||||||||||||||    
T  3305856 gagattaaaaggttataactccggaaagggttttgtgtcaagagattgatcaaaaccactta 3305917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 4250293 - 4250453
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||||||||||||| |||||||||||||| ||||||||||  |||||||||||||||||| ||| | ||   |||||| ||||||||||||||| |  |    
T  4250293 tgtttaattcaacat-aggaacctagagataggaaattgagagttatgacttatgaattaacgttctgacatagcttccacggttattcaatcggtttaa 4250391  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaaccactta 162  Q
    || ||||||||||||||||||  |||||| ||||||||||||||||||||||||||||||||    
T  4250392 gagattaaaaggttataacttcggaaagggttttgagtcaagagattgatcaaaaccactta 4250453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 4226062 - 4225902
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||||||||||||| |||||||||||||| ||||||||||| ||||||| |||||||||| ||||| ||   ||||  |||||||||||||||| |  |    
T  4226062 tgtttaattcaacat-aggaacctagagataggaaattgagggttatgacatatgaattaacgttttgacatagcttttgcggttattcaatcggtttaa 4225964  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaaccactta 162  Q
    || ||||||||||||||||||  |||||| |||||||||||||||||||||||||| |||||    
T  4225963 gagattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaaactactta 4225902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 18883121 - 18883274
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||||| ||| | ||   |||||| |||||||||||| || |  |    
T  18883121 tgtttaattcaacat-aggaacctagagataggaaattgaggattatgacatatgaattaacgttctgacatcgcttccacggttattcaattggtttaa 18883219  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaa 155  Q
    || ||||||||||||||||||  |||||| |||||||||||||||||||||||||    
T  18883220 gagattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaaa 18883274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 42354622 - 42354468
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||||||||||||| |||||||||||||| ||||||||||| ||||||| ||||||||||  || | ||   ||||| |||||||||||||||| |  |    
T  42354622 tgtttaattcaacat-aggaacctagagataggaaattgagggttatgacatatgaattaacattctgacatcgcttctgcggttattcaatcggtttaa 42354524  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaac 156  Q
    || ||||||||||| |||||| ||||||| ||||||||||||||||||||||||||    
T  42354523 gagattaaaaggttttaacttaagaaagggttttgagtcaagagattgatcaaaac 42354468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 3 - 156
Target Start/End: Original strand, 9154725 - 9154877
Alignment:
Q  3 tttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctctaga 102  Q
    ||||||||||||| |||||||||||||| ||||||||||| ||||||| ||||||||||  || | ||   |||||  ||||||||||||||| |  |||    
T  9154725 tttaattcaacat-aggaacctagagataggaaattgagggttatgacatatgaattaacattctgacatcgcttcaacggttattcaatcggtttaaga 9154823  T
Q  103 aattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaac 156  Q
     ||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  9154824 gattaaaaggttataacttaggaaaggattttgagtcaagagattgatcaaaac 9154877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 19868890 - 19869044
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||||| ||| |     |||||||||||||||||||| || |  |    
T  19868890 tgtttaattcaacat-aggaacctagagataggaaattgaggattatgacatatgaattaacgttctgttattgcttccgcggttattcaattggtttaa 19868988  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaac 156  Q
    || ||||||| ||||||||||  |||||  ||||||||||||||||||||||||||    
T  19868989 gagattaaaaagttataacttaggaaagagttttgagtcaagagattgatcaaaac 19869044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 6173562 - 6173402
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||| ||||||||| |||||||||||||| |||||||||| || ||||| |||||||||| |||   ||   |||||||||||||||||||||| |  |    
T  6173562 tgtttgattcaacat-aggaacctagagataggaaattgagaatcatgacatatgaattaacgttcagacatcgcttccgcggttattcaatcggtttaa 6173464  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaaccactta 162  Q
    || ||||||||||||||||||  |||||| |||||| ||||||||||||||||||| |||||    
T  6173463 gagattaaaaggttataacttaggaaagggttttgattcaagagattgatcaaaactactta 6173402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 23 - 162
Target Start/End: Original strand, 18551597 - 18551736
Alignment:
Q  23 ctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctctagaaattaaaaggttataacttg 122  Q
    |||||||| |||| ||| |  |||||||||||| ||||| ||| ||||||||||||| | ||||||||||||| |  ||| ||||||||||||||||||     
T  18551597 ctagagataggaagttgcgagttatgacttatggattaacgttctcaccatgcttccactgttattcaatcggtttaagagattaaaaggttataactta 18551696  T
Q  123 agaaaggattttgagtcaagagattgatcaaaaccactta 162  Q
     |||||| ||||||| ||||||||||||||||||||||||    
T  18551697 ggaaagggttttgagacaagagattgatcaaaaccactta 18551736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 2784029 - 2784189
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||| ||||||||| |||||||||||||| ||||||||||||| |||||| ||||||||| ||| |      ||||| | |||||||||||||| |  |    
T  2784029 tgtttgattcaacat-aggaacctagagataggaaattgaggatcatgactcatgaattaacgttcttttatcgcttctgtggttattcaatcggtttaa 2784127  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaaccactta 162  Q
    || ||||||||||||||||||  |||||| |||||||||||||||||||||||||| |||||    
T  2784128 gagattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaaactactta 2784189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 3 - 156
Target Start/End: Original strand, 9157898 - 9158050
Alignment:
Q  3 tttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctctaga 102  Q
    ||||||||||||| |||||||||||||| | ||||||||| ||||||| ||||||||||  || | ||    ||||||||||||||||||| | |  |||    
T  9157898 tttaattcaacat-aggaacctagagatagaaaattgagggttatgacatatgaattaacattctgacatcacttccgcggttattcaatcagtttaaga 9157996  T
Q  103 aattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaac 156  Q
     ||||||||||||||| || ||||||| ||||||||||||||||||||||||||    
T  9157997 gattaaaaggttataaattaagaaagggttttgagtcaagagattgatcaaaac 9158050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 10959808 - 10959968
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgt--tttcaccatgcttccgcggttattcaatcggctc 98  Q
    ||||| ||||||||| |||||||||||||| ||||||||||||| |||||| ||||||||| ||  ||| | |  |||||||| ||||||||||||| |     
T  10959808 tgtttgattcaacat-aggaacctagagataggaaattgaggatcatgactcatgaattaacgtacttttatc--gcttccgcagttattcaatcggttt 10959904  T
Q  99 tagaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaaccactta 162  Q
     ||| |||||||| |||||||||  |||||| |||||||||||||||||||||||||| |||||    
T  10959905 aagagattaaaagattataacttaggaaagggttttgagtcaagagattgatcaaaactactta 10959968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 10963315 - 10963475
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgt--tttcaccatgcttccgcggttattcaatcggctc 98  Q
    ||||| ||||||||| |||||||||||||| ||||||||||||| |||||| ||||||||| ||  ||| | |  |||||||| ||||||||||||| |     
T  10963315 tgtttgattcaacat-aggaacctagagataggaaattgaggatcatgactcatgaattaacgtacttttatc--gcttccgcagttattcaatcggttt 10963411  T
Q  99 tagaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaaccactta 162  Q
     ||| |||||||| |||||||||  |||||| |||||||||||||||||||||||||| |||||    
T  10963412 aagagattaaaagattataacttaggaaagggttttgagtcaagagattgatcaaaactactta 10963475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 10966824 - 10966984
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgt--tttcaccatgcttccgcggttattcaatcggctc 98  Q
    ||||| ||||||||| |||||||||||||| ||||||||||||| |||||| ||||||||| ||  ||| | |  |||||||| ||||||||||||| |     
T  10966824 tgtttgattcaacat-aggaacctagagataggaaattgaggatcatgactcatgaattaacgtacttttatc--gcttccgcagttattcaatcggttt 10966920  T
Q  99 tagaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaaccactta 162  Q
     ||| |||||||| |||||||||  |||||| |||||||||||||||||||||||||| |||||    
T  10966921 aagagattaaaagattataacttaggaaagggttttgagtcaagagattgatcaaaactactta 10966984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 5887193 - 5887038
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgtt-ttcaccatgcttccgcggttattcaatcggctct 99  Q
    ||||| ||||||||| |||||||||||||| |||||||||| || ||||| |||||||||| ||| || | |  |||||||| ||||||||||||| |      
T  5887193 tgtttgattcaacat-aggaacctagagataggaaattgagaatcatgacatatgaattaacgttatttatc--gcttccgcagttattcaatcggttta 5887097  T
Q  100 agaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaacca 158  Q
    ||| ||||||||||||||||||  |||||| |||||| |||||||||||||||||||||    
T  5887096 agagattaaaaggttataacttaggaaagggttttgattcaagagattgatcaaaacca 5887038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 5897177 - 5897022
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgtt-ttcaccatgcttccgcggttattcaatcggctct 99  Q
    ||||| ||||||||| |||||||||||||| |||||||||| || ||||| |||||||||| ||| || | |  |||||||| ||||||||||||| |      
T  5897177 tgtttgattcaacat-aggaacctagagataggaaattgagaatcatgacatatgaattaacgttatttatc--gcttccgcagttattcaatcggttta 5897081  T
Q  100 agaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaacca 158  Q
    ||| ||||||||||||||||||  |||||| |||||| |||||||||||||||||||||    
T  5897080 agagattaaaaggttataacttaggaaagggttttgattcaagagattgatcaaaacca 5897022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 2279829 - 2279669
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||| ||||||||| |||||||||||||| |||||||||| || ||||  |||||||||| ||| | ||   |||||||| ||||||||||||| |  |    
T  2279829 tgtttgattcaacat-aggaacctagagataggaaattgagaatcatgatatatgaattaacgttctgacatcgcttccgcagttattcaatcggtttaa 2279731  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaaccactta 162  Q
    || |||||| |||||||||||  |||||| |||||| ||||||||||||||||||| |||||    
T  2279730 gagattaaagggttataacttaggaaagggttttgattcaagagattgatcaaaactactta 2279669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 16414965 - 16414809
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||| ||||||||| |||||||||||||| |||||||||| || ||||| |||||||||| ||| |      |||||||||||||||||||||| |  |    
T  16414965 tgtttgattcaacat-aggaacctagagataggaaattgagaatcatgacatatgaattaacgttcttttatcgcttccgcggttattcaatcggtttaa 16414867  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaacca 158  Q
    || ||||||||||||||||||  |||||| |||||| ||||||||||||| |||||||    
T  16414866 gagattaaaaggttataacttaggaaagggttttgattcaagagattgataaaaacca 16414809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 25888679 - 25888519
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||| ||||||||| |||||||||||||| | |||||||||||| ||||  ||||||||| || ||      |||||||||||||||||||||| |  |    
T  25888679 tgtttgattcaacat-aggaacctagagatagaaaattgaggattgtgacacatgaattaacgtatttttatcgcttccgcggttattcaatcggtttaa 25888581  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaaccactta 162  Q
    || ||||||||||||||||||  |||| | |||||||||||||||||||||||||| |||||    
T  25888580 gagattaaaaggttataacttaggaaatggttttgagtcaagagattgatcaaaactactta 25888519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 7 - 158
Target Start/End: Complemental strand, 16314793 - 16314643
Alignment:
Q  7 attcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctctagaaatt 106  Q
    ||||||||| |||||||||||||| |||||||||| || ||||| |||||||||| ||| |      |||||||||||||||||||||| |  ||| |||    
T  16314793 attcaacat-aggaacctagagataggaaattgagaatcatgacatatgaattaacgttcttttatcgcttccgcggttattcaatcggtttaagagatt 16314695  T
Q  107 aaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaacca 158  Q
    |||||||||||||||  || ||| |||||| |||||||||||||||||||||    
T  16314694 aaaaggttataacttaggatagggttttgattcaagagattgatcaaaacca 16314643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 7 - 158
Target Start/End: Complemental strand, 18495787 - 18495637
Alignment:
Q  7 attcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctctagaaatt 106  Q
    ||||||||| |||||||||||||| |||||||||| || ||||| |||||||||| ||| |      |||||||||||||||||||||| |  ||| |||    
T  18495787 attcaacat-aggaacctagagataggaaattgagaatcatgacatatgaattaacgttcttttatcgcttccgcggttattcaatcggtttaagagatt 18495689  T
Q  107 aaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaacca 158  Q
    |||||||||||||||  || ||| |||||| |||||||||||||||||||||    
T  18495688 aaaaggttataacttaggatagggttttgattcaagagattgatcaaaacca 18495637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 18515939 - 18515783
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||| ||||||||| |||||||||||||| |||||||||| || ||||| |||||||||| ||| |      |||||||| ||||||||||||| |  |    
T  18515939 tgtttgattcaacat-aggaacctagagataggaaattgagaatcatgacatatgaattaacgttcttttatcgcttccgcagttattcaatcggtttaa 18515841  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaacca 158  Q
    || ||||||||||||||||||  |||||| |||||| ||||||||||||| |||||||    
T  18515840 gagattaaaaggttataacttaggaaagggttttgattcaagagattgataaaaacca 18515783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 23374939 - 23374783
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||| ||||||||| |||||||||||||| |||| ||||| || ||||| |||||||||| ||| |      |||||||| ||||||||||||| |  |    
T  23374939 tgtttgattcaacat-aggaacctagagataggaatttgagaatcatgacatatgaattaacgttcttttatagcttccgcagttattcaatcggtttaa 23374841  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaacca 158  Q
    || ||||||||||||||||||  |||||| |||||| |||||||||||||||||||||    
T  23374840 gagattaaaaggttataacttaggaaagggttttgattcaagagattgatcaaaacca 23374783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 30158242 - 30158086
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatg----ggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggc 96  Q
    ||||| ||||||||| ||||||||||||||     ||||||||||||| |||||| ||||||||| ||| |      ||||||||||||||||||||||     
T  30158242 tgtttgattcaacat-aggaacctagagatatataggaaattgaggatcatgactcatgaattaacgttcttttatcgcttccgcggttattcaatcggt 30158144  T
Q  97 tctagaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaa 154  Q
    |  ||| ||||||||||||||||||  |||||| ||||||||||||||||||||||||    
T  30158143 ttaagagattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaa 30158086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 29233797 - 29233642
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||| ||||||||| |||||||||||||| |||||||||| || ||||| |||||||||| ||| |      ||||| || ||||||||||| | |  |    
T  29233797 tgtttgattcaacat-aggaacctagagataggaaattgagaatcatgacatatgaattaacgttcttttatcgcttctgcagttattcaatcagtttaa 29233699  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaacca 158  Q
    || |||||||||||||||||| ||||||| |||||| |||||||||||||||||||||    
T  29233698 gagattaaaaggttataactt-agaaagggttttgactcaagagattgatcaaaacca 29233642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 54736341 - 54736185
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccg-cggttattcaatcggctct 99  Q
    |||||||||||| || |||||||||||||| ||||||| ||||||||||| |||||||||| ||| | ||   ||    | ||||||||||||||| |      
T  54736341 tgtttaattcaatat-aggaacctagagataggaaattaaggattatgacatatgaattaacgttctgacatcgcggaaggcggttattcaatcggttta 54736243  T
Q  100 agaaattaaaaggttataacttgagaaa-ggattttgagtcaagagattgatcaaaac 156  Q
    ||| ||||||||||||||||||  |||| || ||||||||||||||||||||||||||    
T  54736242 agagattaaaaggttataacttaggaaagggtttttgagtcaagagattgatcaaaac 54736185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 73 - 156
Target Start/End: Complemental strand, 20536723 - 20536640
Alignment:
Q  73 tgcttccgcggttattcaatcggctctagaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaac 156  Q
    ||||| ||| ||||||||||||| |  ||| ||||||||||||||||||  |||||| ||||||||||||||||||||||||||    
T  20536723 tgctttcgcagttattcaatcggtttaagagattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaaac 20536640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 44508716 - 44508809
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcgg 95  Q
    ||||||||||||||  |||||||||||||| ||||||||||| ||||||| |||||||||| ||| | ||   ||||||||||||||||||||||    
T  44508716 tgtttaattcaacac-aggaacctagagataggaaattgagggttatgacatatgaattaacgttctgacatcgcttccgcggttattcaatcgg 44508809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 104 - 154
Target Start/End: Complemental strand, 36037064 - 36037014
Alignment:
Q  104 attaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaa 154  Q
    |||||||||||||||| |  |||||| ||||||||||||||||||||||||    
T  36037064 attaaaaggttataacctaggaaagggttttgagtcaagagattgatcaaa 36037014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 106; Significance: 4e-53; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 40677983 - 40677823
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||| |  |    
T  40677983 tgtttaattcaacat-aggaacctagagataggaaattgaggattatgacttatgaattaacgttctcaccatgcttccgcgattattcaatcggtttaa 40677885  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaaccactta 162  Q
    || ||||||||||||||||||  |||||| ||||| ||||||||||||||||||||||||||    
T  40677884 gagattaaaaggttataacttaggaaagggttttgtgtcaagagattgatcaaaaccactta 40677823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 38316258 - 38316098
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||| |  |    
T  38316258 tgtttaattcaacat-aggaacttagagataggaaattgaggattatgacttatgaattaacgttctcaccatgcttccgcagttattcaatcggtttaa 38316160  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaaccactta 162  Q
    || ||||||||||||||||||  |||||| |||||||| |||||||||||||| ||||||||    
T  38316159 gatattaaaaggttataacttaggaaagggttttgagtgaagagattgatcaataccactta 38316098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 30719682 - 30719834
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||||||||||||| |||||||||||||| ||||||||||| ||||||| |||||||||| ||| | ||   |||||||||||||||||||||| |  |    
T  30719682 tgtttaattcaacat-aggaacctagagataggaaattgagggttatgacatatgaattaacgttctgacatcgcttccgcggttattcaatcggtttaa 30719780  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaa 154  Q
    || ||||||| ||||||||||  |||||| ||||||||||||||||||||||||    
T  30719781 gagattaaaatgttataacttaggaaagggttttgagtcaagagattgatcaaa 30719834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 1503644 - 1503490
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||||||||||||| |||||||||||||| | ||||||||| ||||||| ||||||||||  || | ||   |||||||||||||||||||||| |  |    
T  1503644 tgtttaattcaacat-aggaacctagagatagaaaattgagggttatgacatatgaattaacattctgacatcgcttccgcggttattcaatcggtttaa 1503546  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaac 156  Q
    || ||||||||||| ||||||  |||||| ||||||||||||||||||||||||||    
T  1503545 gagattaaaaggttttaacttaggaaagggttttgagtcaagagattgatcaaaac 1503490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 1506848 - 1506694
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||||||||||||| |||||||||||||| ||||||||||| ||||||| ||||||||||  || | ||   |||||||||||||||||||||| |  |    
T  1506848 tgtttaattcaacat-aggaacctagagataggaaattgagggttatgacatatgaattaacattctgacatcgcttccgcggttattcaatcggtttaa 1506750  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaac 156  Q
    || ||||||| ||| ||||||  |||||| ||||||||||||||||||||||||||    
T  1506749 gagattaaaatgttttaacttaggaaagggttttgagtcaagagattgatcaaaac 1506694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 16 - 162
Target Start/End: Complemental strand, 15719471 - 15719325
Alignment:
Q  16 taggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctctagaaattaaaaggtta 115  Q
    ||||||||||||||| |||||||||| || ||||| |||||||||| ||| | ||   |||||||| ||||||||||||| |  ||| ||||||||||||    
T  15719471 taggaacctagagataggaaattgagaatcatgacatatgaattaacgttctgacatcgcttccgcagttattcaatcggttgaagagattaaaaggtta 15719372  T
Q  116 taacttgagaaaggattttgagtcaagagattgatcaaaaccactta 162  Q
    ||||||  |||||| ||| |||||||||||||||||||||| |||||    
T  15719371 taacttaggaaagggtttcgagtcaagagattgatcaaaactactta 15719325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 16 - 162
Target Start/End: Original strand, 29435672 - 29435818
Alignment:
Q  16 taggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctctagaaattaaaaggtta 115  Q
    ||||||||||||||| |||||||||| || ||||| ||||||||||  || | ||   |||||||||||||||||||||| |  ||| ||||||| ||||    
T  29435672 taggaacctagagataggaaattgagaatcatgacatatgaattaacattctgacatcgcttccgcggttattcaatcggtttaagagattaaaatgtta 29435771  T
Q  116 taacttgagaaaggattttgagtcaagagattgatcaaaaccactta 162  Q
    ||||||  |||||| |||||||||||||||||||||||||| |||||    
T  29435772 taacttaggaaagggttttgagtcaagagattgatcaaaactactta 29435818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 15704165 - 15704021
Alignment:
Q  18 ggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctctagaaattaaaaggttata 117  Q
    ||||||||||||| |||||||||| || ||||| |||||||||||||| | ||    ||||||| ||||||||||||| |  ||| ||||||||||||||    
T  15704165 ggaacctagagataggaaattgagaatcatgacatatgaattaatgttctgacatctcttccgcagttattcaatcggtttaagagattaaaaggttata 15704066  T
Q  118 acttgagaaaggattttgagtcaagagattgatcaaaaccactta 162  Q
    ||||  |||||| ||| |||||||||||||||||||||| |||||    
T  15704065 acttaggaaagggtttcgagtcaagagattgatcaaaactactta 15704021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 18938802 - 18938957
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgtt-ttcaccatgcttccgcggttattcaatcggctct 99  Q
    ||||| ||||||||| |||||||||||||| |||||||||| || ||||| |||||||||| ||| || | |  |||||||| ||||||||||||| |      
T  18938802 tgtttgattcaacat-aggaacctagagataggaaattgagaatcatgacatatgaattaacgttatttatc--gcttccgcagttattcaatcggttta 18938898  T
Q  100 agaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaacca 158  Q
    ||| ||||||||||||||||||  |||||| |||||| |||||||||||||||||||||    
T  18938899 agagattaaaaggttataacttaggaaagggttttgattcaagagattgatcaaaacca 18938957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 11059707 - 11059859
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||| ||||||||| || ||||||||||| ||||||||||||| |||||| ||||||||| ||| |      |||||||||||||||||||||  |  |    
T  11059707 tgtttgattcaacataag-aacctagagataggaaattgaggatcatgactcatgaattaacgttcttttatcgcttccgcggttattcaatcgctttaa 11059805  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaa 154  Q
    || ||||||||||||||||||  |||||| ||||||||||||||||||||||||    
T  11059806 gagattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaa 11059859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 38326482 - 38326322
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatc------g 94  Q
    ||||||||||||||| |||||||||||||| ||||||||||| ||||||| |||||||| | ||| | ||   ||||||||||||||||||||      |    
T  38326482 tgtttaattcaacat-aggaacctagagataggaaattgagggttatgacatatgaattcacgttctgacatcgcttccgcggttattcaatcggtttag 38326384  T
Q  95 gctctagaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaac 156  Q
    | |  ||| ||||||||||||||||||  |||||  ||||||||||||||||||||||||||    
T  38326383 gtttaagagattaaaaggttataacttaggaaagagttttgagtcaagagattgatcaaaac 38326322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 13518212 - 13518363
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||| ||||||||| || ||||||||||| ||||||||||||| |||||| ||||||||| ||| |      ||||||||||| ||||||||||||  |    
T  13518212 tgtttgattcaacataag-aacctagagataggaaattgaggatcatgactcatgaattaacgttcttttatcgcttccgcggt-attcaatcggcttaa 13518309  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaa 154  Q
    || ||||||||||||||||||  ||||||  |||||||||||||||||||||||    
T  13518310 gagattaaaaggttataacttaggaaaggggtttgagtcaagagattgatcaaa 13518363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 33 - 162
Target Start/End: Original strand, 11056280 - 11056409
Alignment:
Q  33 gaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctctagaaattaaaaggttataacttgagaaaggatt 132  Q
    |||||||||||| |||||| ||||||||| ||| |      |||||||||||||||||||||  |  ||| ||||||||||||||||||  |||||| ||    
T  11056280 gaaattgaggatcatgactcatgaattaacgttcttttatcgcttccgcggttattcaatcgatttaagagattaaaaggttataacttaggaaagggtt 11056379  T
Q  133 ttgagtcaagagattgatcaaaaccactta 162  Q
    |||||||||||||||||||||||| |||||    
T  11056380 ttgagtcaagagattgatcaaaactactta 11056409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 74 - 156
Target Start/End: Original strand, 4577804 - 4577886
Alignment:
Q  74 gcttccgcggttattcaatcggctctagaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaac 156  Q
    |||||||||||||||||||||| |  ||| |||| |||||||||||||  |||||| ||||||||||||||||||||||||||    
T  4577804 gcttccgcggttattcaatcggtttaagagattataaggttataacttaggaaagggttttgagtcaagagattgatcaaaac 4577886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 22592422 - 22592577
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||| ||||||||| |||||| ||||||| |||| ||||| || ||||| |||||||||| ||| |      |||||||| ||||||||||||| |  |    
T  22592422 tgtttgattcaacat-aggaacttagagataggaa-ttgagaatcatgacatatgaattaacgttcttttatcgcttccgcagttattcaatcggtttaa 22592519  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaacca 158  Q
    || ||||||||||||| ||||  |||||| |||||| |||||||||||||||||||||    
T  22592520 gagattaaaaggttatgacttaggaaagggttttgactcaagagattgatcaaaacca 22592577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 18011858 - 18012010
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||| ||||||||| |||||||||||||| | |||||||||||||||||  ||||||||| ||| |      ||||||||||       ||||| |  |    
T  18011858 tgtttgattcaacat-aggaacctagagatagaaaattgaggattatgacacatgaattaacgttcttttatcgcttccgcgg-------atcggtttaa 18011949  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaaccactta 162  Q
    || ||||||||||||||||||  |||||| ||| |||||||||||||||||||||| |||||    
T  18011950 gagattaaaaggttataacttaggaaagggttt-gagtcaagagattgatcaaaactactta 18012010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 106; Significance: 4e-53; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 18392300 - 18392459
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| | ||    
T  18392300 tgtttaattcaacat-aggaacctagagataggaaattgaggattatgacttatgaattaacgttctcaccatgcttccgcggttattcaatcgg-ttta 18392397  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaaccactta 162  Q
      | |||||||||||||||||  |||||| ||||||||||||||||||||||||||||||||    
T  18392398 agagttaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaaaccactta 18392459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 34552895 - 34552735
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||| |  |    
T  34552895 tgttttattcaacat-aggaacctagagataggaaattgaggattatgacttatgaattaacgttctcaccatgattccgcggttattcaatcggtttaa 34552797  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaaccactta 162  Q
    || ||||||||||||||||||  |||||| ||||||||||||||||||||||||||||||||    
T  34552796 gagattaaaaggttataactttggaaagggttttgagtcaagagattgatcaaaaccactta 34552735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 23441495 - 23441335
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||| |||| |  |    
T  23441495 tgtttaattcaacat-aggaacctagagataggaaattgaggattatgacttatgaattaacgttctcaccatgcttccgcgattattcattcggtttaa 23441397  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaaccactta 162  Q
    || ||||||||||||||||||  |||||| ||||| ||||||||||||||||||||||||||    
T  23441396 gagattaaaaggttataacttaggaaagggttttgtgtcaagagattgatcaaaaccactta 23441335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 33898233 - 33898393
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||||||||||||| |||||||||||||| | ||||||||  |||||| ||||||||||| ||  ||||||||||||||| ||||||||||||| |  |    
T  33898233 tgtttaattcaacat-aggaacctagagatagaaaattgagagttatgaattatgaattaacgtactcaccatgcttccgcagttattcaatcggtttaa 33898331  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaaccactta 162  Q
    || ||||||||||||||||||  |||||| ||||||||||||||||||||||||||||||||    
T  33898332 gagattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaaaccactta 33898393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 3087936 - 3087776
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||||||||||||| |||||||||||||| ||||||||||  |||||||||||| ||||| ||| ||| |||| |||||| ||||||||||||| |  |    
T  3087936 tgtttaattcaacat-aggaacctagagataggaaattgagagttatgacttatggattaacgttgtcatcatgtttccgcagttattcaatcggtttaa 3087838  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaaccactta 162  Q
    || ||||||||||||||||||   ||||  ||||||||| ||||||||||||||||||||||    
T  3087837 gagattaaaaggttataacttagtaaagagttttgagtcgagagattgatcaaaaccactta 3087776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 20981267 - 20981427
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||| ||||||||| |||||||||||||| |||||||||| || ||||| |||||||||| ||| | |   ||||||||||||||||||||||| |  |    
T  20981267 tgtttgattcaacat-aggaacctagagataggaaattgagaatcatgacatatgaattaacgttctgatattgcttccgcggttattcaatcggtttaa 20981365  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaaccactta 162  Q
    || ||||||||||||||||||  ||||||||||||| ||||||||||||||||||| |||||    
T  20981366 gagattaaaaggttataacttaggaaaggattttgattcaagagattgatcaaaactactta 20981427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 50197171 - 50197014
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatggg----aaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggc 96  Q
    ||||||||||||||| |||||||||||||| |     ||||||||   ||||||||||||||||| ||| ||||||||||||| |||||||||||||||     
T  50197171 tgtttaattcaacat-aggaacctagagatagatagaaaattgag---tatgacttatgaattaacgttctcaccatgcttccacggttattcaatcggt 50197076  T
Q  97 tctagaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaacca 158  Q
    |  ||| ||||||||||||||||||  |||||| ||||||||||||||||||||||||||||    
T  50197075 ttaagagattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaaacca 50197014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 49719762 - 49719922
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||| ||||||||| |||||||||||||| |||||||||| || ||||| ||||||||||  || | ||   |||||||||||||||||||||| |  |    
T  49719762 tgtttgattcaacat-aggaacctagagataggaaattgagaatcatgacatatgaattaacattctgacatcgcttccgcggttattcaatcggtttaa 49719860  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaaccactta 162  Q
    || |||||||| |||||||||  |||||| |||||||||||||||||||||||||| |||||    
T  49719861 gagattaaaagattataacttaggaaagggttttgagtcaagagattgatcaaaactactta 49719922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 49716278 - 49716440
Alignment:
Q  1 tgtttaattcaacat-taggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctct 99  Q
    ||||| ||||||||| ||| ||||||||||| |||||||||| || ||||| ||||||||||  || | ||   |||||||||||||||||||||| |      
T  49716278 tgtttgattcaacatatagaaacctagagataggaaattgagaatcatgacatatgaattaacattctgacatcgcttccgcggttattcaatcggttta 49716377  T
Q  100 agaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaaccactta 162  Q
    ||| |||||||| |||||||||  |||||| |||||||||||||||||||||||||| |||||    
T  49716378 agagattaaaagattataacttaggaaagggttttgagtcaagagattgatcaaaactactta 49716440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 17902998 - 17902839
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||| ||||||||| ||||| |||||||| |||||||||| || |||||| ||||||||| || || |    |||||||||||||||||||||| |  |    
T  17902998 tgtttgattcaacat-aggaatctagagataggaaattgagaatcatgactcatgaattaacgtctttattc-gcttccgcggttattcaatcggtttaa 17902901  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaaccactta 162  Q
    || ||||||||||||||||||  |||||| |||||||||||||||||||||||||| |||||    
T  17902900 gagattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaaactactta 17902839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 28918282 - 28918442
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||| ||||||||| |||||||||||||| ||||||||||||| |||||| ||||||||| ||| |      | |||||||||||||||||||| |  |    
T  28918282 tgtttgattcaacat-aggaacctagagataggaaattgaggatcatgactcatgaattaacgttcttgtatcgtttccgcggttattcaatcggtttaa 28918380  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaaccactta 162  Q
    || |||||||| |||||||||  |||||| |||||||||||||||||||||||||| |||||    
T  28918381 gagattaaaagattataacttaggaaagggttttgagtcaagagattgatcaaaactactta 28918442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 16839144 - 16838989
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgtt-ttcaccatgcttccgcggttattcaatcggctct 99  Q
    ||||| ||||||||| |||||||||||||| |||||||||| || ||||| |||||||||| ||| || |   ||||||||| ||||||||||||| |      
T  16839144 tgtttgattcaacat-aggaacctagagataggaaattgagaatcatgacatatgaattaacgttatttat--tgcttccgcagttattcaatcggttta 16839048  T
Q  100 agaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaacca 158  Q
    ||| ||||||||||||||||||  |||||| |||||| |||||||||||||||||||||    
T  16839047 agagattaaaaggttataacttaggaaagggttttgattcaagagattgatcaaaacca 16838989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 16849074 - 16848919
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgtt-ttcaccatgcttccgcggttattcaatcggctct 99  Q
    ||||| ||||||||| |||||||||||||| |||||||||| || ||||| |||||||||| ||| || |   ||||||||| ||||||||||||| |      
T  16849074 tgtttgattcaacat-aggaacctagagataggaaattgagaatcatgacatatgaattaacgttatttat--tgcttccgcagttattcaatcggttta 16848978  T
Q  100 agaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaacca 158  Q
    ||| ||||||||||||||||||  |||||| |||||| |||||||||||||||||||||    
T  16848977 agagattaaaaggttataacttaggaaagggttttgattcaagagattgatcaaaacca 16848919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 37641775 - 37641927
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||| ||||||||| |||||||||||||| ||||||||||||| |||||| ||||||||| ||| |      |||||||||||||||||||||| |  |    
T  37641775 tgtttgattcaacat-aggaacctagagataggaaattgaggatcatgactcatgaattaacgttcttttatcgcttccgcggttattcaatcggtttaa 37641873  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaa 154  Q
    || |||| ||||||||||| |  |||||| ||||||||||||||||||||||||    
T  37641874 gagattacaaggttataacctaggaaagggttttgagtcaagagattgatcaaa 37641927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 20964364 - 20964523
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||| ||||||||| ||||||||||| || |||||||||| || ||||| |||||||||| ||| | |   ||||||||| |||||||||| || |  |    
T  20964364 tgtttgattcaacat-aggaacctagatataggaaattgagaatcatgacatatgaattaacgttctgatattgcttccgcagttattcaattggtttaa 20964462  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaaccactta 162  Q
    || ||||||||||||||||||  ||||||  ||||| ||||||||||||||||||| |||||    
T  20964463 gagattaaaaggttataacttaggaaagg-gtttgattcaagagattgatcaaaactactta 20964523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 24200455 - 24200299
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||| ||||||||| |||||||||||||| |||||||||| || ||||| |||||||||| ||| |      |||||||| ||||||||||||| |  |    
T  24200455 tgtttgattcaacat-aggaacctagagataggaaattgagaatcatgacatatgaattaacgttcttttatcgcttccgcagttattcaatcggtttaa 24200357  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaacca 158  Q
    || || ||||| |||||||||  |||||| |||||| |||||||||||||||||||||    
T  24200356 gagataaaaagattataacttaggaaagggttttgattcaagagattgatcaaaacca 24200299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 68 - 162
Target Start/End: Original strand, 6205853 - 6205948
Alignment:
Q  68 caccatgcttccgcggttattcaatcggctctagaaattaaaaggttataacttgagaaa-ggattttgagtcaagagattgatcaaaaccactta 162  Q
    |||||||||||||||||||||||||||| |  ||| ||||||| ||||||||||  |||| || ||||||||||||||||||||||||| ||||||    
T  6205853 caccatgcttccgcggttattcaatcggtttaagagattaaaaagttataacttaggaaagggtttttgagtcaagagattgatcaaaatcactta 6205948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 6195725 - 6195797
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatg 74  Q
    ||||||||||||||| |||||||||||||| ||||| |||||||||||||||||||||||| ||| ||||||||    
T  6195725 tgtttaattcaacat-aggaacctagagataggaaaatgaggattatgacttatgaattaacgttctcaccatg 6195797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 82; Significance: 7e-39; HSPs: 2)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 29229 - 29389
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||||||||||| |  ||||||||||||| |||||||||| ||||||||||||||||||| ||| | ||   |||||| ||||||||||||||| |       
T  29229 tgtttaattcaacctg-ggaacctagagataggaaattgagaattatgacttatgaattaacgttctgacatagcttccacggttattcaatcggtttag 29327  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaaccactta 162  Q
    |||||||||||||||||||||  |||||| ||||||||||||||||||||||||||||||||    
T  29328 gaaattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaaaccactta 29389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 53026 - 53186
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||||||||||||| |||||||||||||| ||||||||||  |||||||||||||||||| ||| | ||   |||||| | ||||||||||||| |  |    
T  53026 tgtttaattcaacat-aggaacctagagataggaaattgagagttatgacttatgaattaacgttctgacatagcttccacagttattcaatcggtttga 53124  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaaccactta 162  Q
    || || ||||||||||||||| |||| || ||||||||||||||||||||||||||||||||    
T  53125 gagatgaaaaggttataacttaagaaggggttttgagtcaagagattgatcaaaaccactta 53186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0401 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0401
Description:

Target: scaffold0401; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 4166 - 4326
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||| ||||||||| |||||||||||||| ||||||||||  |||||||||||||||||| ||| | ||   |||||| ||||||||||||||| |  |    
T  4166 tgtttcattcaacat-aggaacctagagattggaaattgagagttatgacttatgaattaacgttctgacatagcttccacggttattcaatcggtttaa 4264  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaaccactta 162  Q
    || ||||||||||||||||||  |||||| ||||||||||| ||||||||||||||||||||    
T  4265 gagattaaaaggttataacttaggaaagggttttgagtcaaaagattgatcaaaaccactta 4326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 74; Significance: 4e-34; HSPs: 2)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 6193 - 6353
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||| ||||||||| |||||||||||||| |||||||||| || ||||| ||| |||||| ||||| ||   ||||||||| ||||| |||||| |  |    
T  6193 tgtttgattcaacat-aggaacctagagataggaaattgagaatcatgacatataaattaacgttttgacatcgcttccgcgattatttaatcggtttaa 6291  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaaccactta 162  Q
    || ||||||||||||||||||  ||||||||||||||||||||||||||||||||| |||||    
T  6292 gagattaaaaggttataacttaggaaaggattttgagtcaagagattgatcaaaactactta 6353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 74 - 162
Target Start/End: Original strand, 2433 - 2521
Alignment:
Q  74 gcttccgcggttattcaatcggctctagaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaaccactta 162  Q
    ||||||||| |||||||||||| |  ||| ||||||||||||||||||  |||||| |||||||||||||||||||||||||| |||||    
T  2433 gcttccgcgattattcaatcggtttaagagattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaaactactta 2521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 7145 - 7296
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||||||||||||| |||||||||||||| ||||||||||| ||||||| |||||||||| ||| | ||   |||||||||||||||||||||| |  |    
T  7145 tgtttaattcaacat-aggaacctagagataggaaattgagggttatgacatatgaattaacgttctgacatcgcttccgcggttattcaatcggtttaa 7243  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaa 153  Q
    || ||||||| ||||||||||  |||| | |||||||||||||||||||||||    
T  7244 gagattaaaatgttataacttaggaaaaggttttgagtcaagagattgatcaa 7296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 72; Significance: 7e-33; HSPs: 2)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 3 - 162
Target Start/End: Original strand, 13501 - 13659
Alignment:
Q  3 tttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctctaga 102  Q
    ||||||||||||| |||||||||||||| ||||||||||  |||||||||||||||||  ||| | ||   |||||| ||||||||||||||| |  |||    
T  13501 tttaattcaacat-aggaacctagagataggaaattgagagttatgacttatgaattagcgttctgacatagcttccacggttattcaatcggtttaaga 13599  T
Q  103 aattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaaccactta 162  Q
     ||||||||| ||||||||  |||||| ||||||||||| ||||||||||||||||||||    
T  13600 gattaaaagggtataacttaggaaagggttttgagtcaatagattgatcaaaaccactta 13659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 162
Target Start/End: Original strand, 5633 - 5664
Alignment:
Q  131 ttttgagtcaagagattgatcaaaaccactta 162  Q
    ||||||||||||||||||||||||||||||||    
T  5633 ttttgagtcaagagattgatcaaaaccactta 5664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0214 (Bit Score: 70; Significance: 1e-31; HSPs: 3)
Name: scaffold0214
Description:

Target: scaffold0214; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 13514 - 13662
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||||||||||||| |||||||||||||| ||||||||||| ||||||  |||||||||| ||| | ||   |||||||||||||||||||||| |  |    
T  13514 tgtttaattcaacat-aggaacctagagataggaaattgagggttatgagatatgaattaacgttctgacatcgcttccgcggttattcaatcggtttaa 13612  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgat 150  Q
    || ||||||||||||||||||  |||||  ||||||||||||||||||||    
T  13613 gagattaaaaggttataacttaggaaagagttttgagtcaagagattgat 13662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0214; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 27530 - 27678
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||||||||||||| |||||||||||||| ||||||||||| ||||||  |||||||||| ||| | ||   |||||||||||||||||||||| |  |    
T  27530 tgtttaattcaacat-aggaacctagagataggaaattgagggttatgagatatgaattaacgttctgacatcgcttccgcggttattcaatcggtttaa 27628  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgat 150  Q
    || ||||||||||||||||||  |||||  ||||||||||||||||||||    
T  27629 gagattaaaaggttataacttaggaaagagttttgagtcaagagattgat 27678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0214; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 19963 - 20117
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||||||||||||| |||||||||||| | ||||||||||| ||||||| |||||||||| ||| | ||   ||||| |||||||||||||||| |  |    
T  19963 tgtttaattcaacat-aggaacctagaggtaggaaattgagggttatgacatatgaattaacgttctgacatggcttctgcggttattcaatcggtttaa 20061  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaac 156  Q
    |  ||||||||||||||||||  |||||  ||||||||||||||||||||||||||    
T  20062 gcgattaaaaggttataacttaggaaagagttttgagtcaagagattgatcaaaac 20117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 67; Significance: 7e-30; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 16 - 162
Target Start/End: Complemental strand, 68028 - 67882
Alignment:
Q  16 taggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctctagaaattaaaaggtta 115  Q
    ||||||||||||||| |||||||||| || ||||| |||||||||| ||| | ||   |||||||| ||||||||||||| |  ||| ||||||||||||    
T  68028 taggaacctagagataggaaattgagaatcatgacatatgaattaacgttctgacatcgcttccgcagttattcaatcggttgaagagattaaaaggtta 67929  T
Q  116 taacttgagaaaggattttgagtcaagagattgatcaaaaccactta 162  Q
    ||||||  |||||| ||| |||||||||||||||||||||| |||||    
T  67928 taacttaggaaagggtttcgagtcaagagattgatcaaaactactta 67882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 53077 - 52933
Alignment:
Q  18 ggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctctagaaattaaaaggttata 117  Q
    ||||||||||||| |||||||||| || ||||| |||||||||||||| | ||    ||||||| ||||||||||||| |  ||| ||||||||||||||    
T  53077 ggaacctagagataggaaattgagaatcatgacatatgaattaatgttctgacatctcttccgcagttattcaatcggtttaagagattaaaaggttata 52978  T
Q  118 acttgagaaaggattttgagtcaagagattgatcaaaaccactta 162  Q
    ||||  |||||| ||| |||||||||||||||||||||| |||||    
T  52977 acttaggaaagggtttcgagtcaagagattgatcaaaactactta 52933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1048 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold1048
Description:

Target: scaffold1048; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 1309 - 1465
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||| ||||||||| |||||||||||||| |||||||||| || ||||| ||||||||||  || | ||   |||||||| ||||||||||||| |  |    
T  1309 tgtttgattcaacat-aggaacctagagataggaaattgagaatcatgacatatgaattaactttctgacatcgcttccgcagttattcaatcggtttaa 1407  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaacca 158  Q
    || ||||||||||||||||||  |||||| |||||| |||||| ||||||||||||||    
T  1408 gagattaaaaggttataacttaggaaagggttttgattcaagatattgatcaaaacca 1465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 28871 - 28717
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccat-gcttccgcggttattcaatcggctct 99  Q
    ||||| ||||||||| ||||||||| |||| |||||||||| || ||||| |||||||| | ||||  | ||| |||||||||||||||||||| | |      
T  28871 tgtttgattcaacat-aggaacctaaagataggaaattgagaatcatgacatatgaatttacgtttagaacatcgcttccgcggttattcaatctgttta 28773  T
Q  100 agaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaa 155  Q
    ||| ||||||||||||||||||  |||||| |||||| |||||||||| |||||||    
T  28772 agacattaaaaggttataacttaggaaagggttttgattcaagagatttatcaaaa 28717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 27090 - 26933
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||| ||||||||| |||||||||||||| |||||||||| || ||||| |||||||||| ||| |      |||||||| ||||||||||||| |  |    
T  27090 tgtttgattcaacat-aggaacctagagataggaaattgagaatcatgacatatgaattaacgttcttttatcgcttccgcagttattcaatcggtttaa 26992  T
Q  101 gaaattaaaa-ggttataacttgagaaaggattttgagtcaagagattgatcaaaacca 158  Q
    || ||||||| |||||| ||||  |||||| |||||| |||||||||||||||||||||    
T  26991 gagattaaaaaggttatgacttaggaaagggttttgactcaagagattgatcaaaacca 26933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 85 - 162
Target Start/End: Original strand, 92423 - 92500
Alignment:
Q  85 tattcaatcggctctagaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaaccactta 162  Q
    ||||||||||| |  ||| ||||||||||||||||||  |||||| ||||||||||||||||||||||||||||||||    
T  92423 tattcaatcggtttaagagattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaaaccactta 92500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 27269 - 27428
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcggctcta 100  Q
    ||||| ||||||||| |||||||||||||| |||||||||  || ||||| || ||||||| ||| |      |||||||| ||||||||||||| |  |    
T  27269 tgtttgattcaacat-aggaacctagagataggaaattgaaaatcatgacataggaattaacgttcttttatcgcttccgcagttattcaatcggtttaa 27367  T
Q  101 gaaattaaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaaccactt 161  Q
    || |||||||||||||||| |  |||| | |||||| |||||||||||| |||||||||||    
T  27368 gagattaaaaggttataacctaggaaaaggttttgattcaagagattgaacaaaaccactt 27428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 227255 - 227348
Alignment:
Q  1 tgtttaattcaacattaggaacctagagatgggaaattgaggattatgacttatgaattaatgttttcaccatgcttccgcggttattcaatcgg 95  Q
    ||||||||||||||| |||||||||||||| ||||||||||| || |||| |||||||||| ||| | ||   |||| |||||||| ||||||||    
T  227255 tgtttaattcaacat-aggaacctagagataggaaattgagggttgtgacatatgaattaacgttctgacatcgctttcgcggttactcaatcgg 227348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 156
Target Start/End: Original strand, 228646 - 228695
Alignment:
Q  107 aaaaggttataacttgagaaaggattttgagtcaagagattgatcaaaac 156  Q
    ||||| |||| ||||  |||||| ||||||||||||||||||||||||||    
T  228646 aaaagattattacttaggaaagggttttgagtcaagagattgatcaaaac 228695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University