View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8557_low_36 (Length: 240)
Name: NF8557_low_36
Description: NF8557
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8557_low_36 |
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Alignment Details
Target: chr7 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 31537626 - 31537849
Alignment:
| Q |
1 |
ccaagcttattattgtcagtactccagagcagtaggtttgattcaacctatatgctctgtaaaaataaaacataaataacacaacaaactgtcgggttcg |
100 |
Q |
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| T |
31537626 |
ccaagcttattattgtcaatactccagagcagtaggtttgattcaacctatatgctctgcaaaaataaaacataaacaacacaacaaactgtcgggttcg |
31537725 |
T |
|
| Q |
101 |
attatagcataacaatacaccagagcagcagtacatcaacaacttaacattagaatacgcaactaaattacatcagaattcagaacagagggatttacaa |
200 |
Q |
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|||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
31537726 |
attatagcataacaatacaccagaacagcagtacatcaacaacttaacattagaatatgcaactaaattacatcagaattcagaacagagggatttacaa |
31537825 |
T |
|
| Q |
201 |
cttaaacaacaacacaactgttat |
224 |
Q |
| |
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||||||||||| |||||||||||| |
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| T |
31537826 |
cttaaacaacagcacaactgttat |
31537849 |
T |
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