View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8557_low_43 (Length: 217)
Name: NF8557_low_43
Description: NF8557
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8557_low_43 |
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Alignment Details
Target: chr8 (Bit Score: 181; Significance: 6e-98; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 24 - 204
Target Start/End: Original strand, 42701773 - 42701953
Alignment:
| Q |
24 |
tgtcgaacatgtcttttacctaaattctcagtgctacgtagattgtgaggaaagatgataaaattcatacccaaccctgtttgtaacgggtgaagaggtc |
123 |
Q |
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| T |
42701773 |
tgtcgaacatgtcttttacctaaattctcagtgctacgtagattgtgaggaaagatgataaaattcatacccaaccctgtttgtaacgggtgaagaggtc |
42701872 |
T |
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| Q |
124 |
ttctgtttgagcattcttaaaagcactgcaagcaatgacataaacccatataagaacaactacagcaacgatgagaataat |
204 |
Q |
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| T |
42701873 |
ttctgtttgagcattcttaaaagcactgcaagcaatgacataaacccatataagaacaactacagcaacgatgagaataat |
42701953 |
T |
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